TCONS_00049228 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049228
Unique NameTCONS_00049228
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1119

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049228 ID=TCONS_00049228|Name=TCONS_00049228|organism=Clytia hemisphaerica|type=transcript|length=1119bp
tgacgattttcgaaaaatagaagcctttcaagtgctttgacgcaaattcg
atttttttgatactgcaggagcttcgaaagttaaaagtgacgtcaaaaaa
tcgaatgtttggagcccgaaaacctgggctcaaaacattcgaaaaagtcg
caaagtagaatagacgttaattgcgtaaaaaaaacgcgggggtgacgtct
agtataggctaggcTTCAATGTCCTTATAAAATTCATAGTATACTTTATT
CGATAAAAAATCCCTAAAATCGGCATCTGCTCATCGGTTTCTGAAATCTG
GTGTCTAAGTTCTTACCAAAATTTATCTTCATTGTCTTATAGAACTcctg
ggggtactaggtttacgGGATGTTGGGTATGTACCGCCTGACTTTTGACG
GTCGGGCCTTTATAGGGACCAAAACGGACCCTTTAGAGGGAgttaaatgg
agaaaaaaacctgatttttttatgaattttactaAGAATCTAGACTTTTG
AGGGTCAAGAAATGagattttagctgtttttacaacccttaggtGGACTg
tacttttcataaaaaaaagcgtgttgcGCCTTTTAAttggtcaaataaaa
aaataatatattgctaatcttaatcttttgaaaatcttttgaaaattgtt
cGTGGATTTATGGTTACTCTTTTAACCAATTACATATTGCTGACACTTCT
AACTTTATGATTTTGACATCAAAATGTTCATTGTTTCGTGATATTAAGGA
TACTAAAGGCCAGTTGCAATcacaataaaaatgttcgaaaaatGCTCAAC
AATATATTGAATCGTCTCTAATTGAAATGTGAAGATCTGTTACATTTTAC
ATTGATTGGTTCAACGGCACTTGGTCAAATGTTTCCGCATTTCTGGCACG
TCTTCGCTGAACGTATTTAAACAACACAAATGCCAATACGATGATGAGTA
GCACAATGGGAATTTGAAGATATAACAGTGTGGTATTTTTGTCGCCAGCG
CTTTCAGTGGTGTCGTCGTTATTGTTGTATGATGCTTGTGTCCTGGTTGG
CTTTTTGATTCTATTGTTGGTGTCGTGGTTTTGGTTGTTTGTTGGATAAT
TATGGAATGTTGGTTCTAT
Run BLAST on NCBI

transcript from alignment at scaffold_154:588779..603265+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049228 ID=TCONS_00049228|Name=TCONS_00049228|organism=Clytia hemisphaerica|type=transcript|length=14487bp|location=Sequence derived from alignment at scaffold_154:588779..603265+ (Clytia hemisphaerica)
tgacgattttcgaaaaatagaagcctttcaagtgctttgacgcaaattcg
atttttttgatactgcaggagcttcgaaagttaaaagtgacgtcaaaaaa
tcgaatgtttggagcccgaaaacctgggctcaaaacattcgaaaaagtcg
caaagtagaatagacgttaattgcgtaaaaaaaacgcgggggtgacgtct
agtataggctaggcTTCAATGTCCTTATAAAATTCATAGTATACTTTATT
CGATAAAAAATCCCTAAAATCGGCATCTGCTCATCGGTTTCTGAAATCTG
GTGTCTAAGTTCTTACCAAAATTTATCTTCATTGTCTTATAGAACTcctg
ggggtactaggtttacgGGATGTTGGGTATGTACCGCCTGACTTTTGACG
GTCGGGCCTTTATAGGGACCAAAACGGACCCTTTAGAGGGAgttaaatgg
agaaaaaaacctgatttttttatgaattttactaAGAATCTAGACTTTTG
AGGGTCAAGAAATGagattttagctgtttttacaacccttaggtGGACTg
tacttttcataaaaaaaagcgtgttgcGCCTTTTAAttggtcaaataaaa
aaataatatattgctaatcttaatcttttgaaaatcttttgaaaattgtt
cGTGGATTTATGGTTACTCTTTTAACCAATTACATATTGCTGACACTTCT
AACTTTATGATTTTGACATCAAAATGTTCATTGTTTCGTGATATTAAGGA
TACTAAAGGCCAGTTGAAATCacaataataaaaaatgttcgaaaaatGCT
CAACAATATATTGAATCGTCTCTAATTGAAATGTGAAGTTCTGTTACATT
TTACATTGATTGGTTCAACGGCACTTGGTCAAATGTTTCCGCATTCCTGG
CACGTCTTCGCTGAACGTATTTAAACAACACAAATGCCAATACGATGATG
AGTAACACAATGGGAATTTGAAGATATAACAGTGTGGTATTTTTGTCGCC
AGCGCTTTCAGTGGTGTCGTCGTTATTGTTGTATGATGCTTGTGTCCTGG
TTGGCTTTTTGATTCTATTGTTGGTGTCGTGGTTTGGTTGTTTGTTGGAT
AATTATGGAATGTTGGTTCTATTAAAATTAGATTGTCATAAGTTGGTCAT
AACAATACGTTATCAAACGTCATAACTTTAGTGTCTTGGAGAACTTtctg
aaatagaccttttcataaattatgtcacaagaatcacttgcctcgttttg
gaattattgccatggtgattaactcccagtggattttattaaaactactt
cctattcataaaagaatcatttaatgtctcaaggggtAATTGTCTGAATA
CGAGGAAAGTGAAATTcgtgatgtaatttatgaaaatgtctatCCTCACC
AAGCTCCTAAATATCAGAAGATCTCCAAGATTCAAAACATATCTACTTAA
GACAAACATTTCTACGTAAGACAAGTAAAGTAAAGGAGGAAATTTGATTG
GCAGAATTCATGGGCATATATTACAAGTAAAACCATACACGACCTTTCAA
CGAGGCCTGTTTCGATAAAGAAGGTTTTAAATGCTATAGACTCCAAGAAG
GACTCTTTAGAGATCGGTATTTACAGCTGATTTTTATTGAACTTCCACGG
TTATAAAGATAGCACTTCATTGATAGGTTTTTTAGAAAGATTTCTTCATT
TCAGAACTGGAAACACCTTATCTTTACCTGCAATCTTGATCTCCAATGTT
GAAgtcatgaaaatttcttcatcaaTTTCACCCAAAGCTATACCATCTCT
TTTAGATCTTCCATTGGAAGCAGGACATCCAAACTGGCAATTCTCCTTTG
ACGTATCTTGGCAAACATACGATTCACAATGGACGAAAATTGAATCACTA
TCTTTGAAATTAAAGGCTTCAATACTGAATCTGAATTTGTTTTGGTTGAT
TTGCTGTTTTTGTTGGTGGTGGTGTCGCCTGTAAGTTTCATCTTTTTCGC
ATCTAAAATGTAtaattacgcacggagcgagcgttagcgagcggagtgcg
actcttttggcaaacgcatgcgcgtaagcaaaatttacaaaatttcaatg
atatgcgggtANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
aaactttgaaaatttcgtgaaaattagcgttttttgagatgaagtcgttg
cagtgtcaatctttcgcaaatttaaaaacccactttcccttggaaaaaat
tgacgttttttcgttttttgggacccttggggcacaaggtacctgttgac
cgcgaaaatttcaaaattcgcgaattgaccgttgataacattaggggtaa
agggacccaatgacgtcacgggtttgggaaaaacttcaaaatgcgatatc
tcgagcttgaagaggagttgggaggtcgttgacccctcaatctatcggga
attttatggggaatgagatgtGAGGATTTATGAGACTTAtaaaggacttt
caaatttggctgaatttttagccattttcagttgatgacgtcatcaaaac
aaaaaaatgcaataaCGTGAGATTGGAAAGGANGATTCGAAATTTTAGAG
ACCCGGAATTTCCGAGTTATTCTTTCCATCCAAGTTAAAAAGCCGAGAAA
TCCCGAGTTAtagatttttcatttcataaatAGGTTTATTTTGCTCCctt
taactttatttttccttttttgactttggaatttttggatCCTTTAACtg
tccgagttatttttcattttgtaactcgtgaatttttacttcctttagct
ttccgagttatttttgattttctaactcgGGAAATTGTGCCTCCNctttc
aaatttggctgaatctttagccattttcagctgatgacgtcatcaaaaaa
aaaaagagataataaataaaaattggctAACAATCGGGTAAGCGatgtga
gaaaatcaaaacaaaacagtcgaaaagaactgaactctcgGAATAAATAT
TGCTAACGGGAAAACGTTAAAAGaaactattttttgatgagctcttattc
tattctttccaaaaagtcagtgaaattaaatctgatgaaatatgaagaaa
ttattacaaaactactcgaCACANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAC
AATGCatgcataaaaacttgaaattctttaatacttgtcaagaatatttt
ccataacaaaacgagggaaattcaatgtctttgattaaaccattaacgag
ggatttttgtaaacGGTCTCTCGTGTCTCCTCCCAGCCAATTCTCCACAA
AACTGTGTCTTTGACTTTTtagcatcaattcttcaacatgTTCGAAAATT
CGACACGTTTACAGCTTGACAATAAAGTTGAAAGTTGAGAAGTTCCCCAT
TTagtttttgtggcaaaaatgttgtttcagaccATTTATAGCTANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCTTACATAACTAGTGTGGGCTTGAGGCGTCTatagaa
tccctttcgctttgcgaacacgagactcgttctccgtgcgtaaccccttt
tacgattgatttcTAAGGTTTGAGGACTACTTTTTACCCTGAAGTTCAAT
CTATTGTAATGTTGAGAGTCAAAAATAAAGCTATTAATTTCTCTACAAAG
TCTAGCCCCATCTATACTAGTTTTTTTGCAAGGAGATCATTTAAGTTCAA
AACTCTCTTTTCGTTCGCATACAGTGTTACCTATGTTTTTAGTCGTTGTC
GGATTTTATTCAACTGTGATATAGACTGTTTTTATTAACTGGAGGTCTGG
TATGATGAAAGGGACACTAAAAAAGTGTGAAATTACCcatccttttgatt
tttttagtaTCTGACGATAGTCGACCTTTAAGATATTGATTTTTATAATA
TAGCGGCGCGCctcttactcttaggtgccaaataaacgggggggttggaa
aaaaatttcaaatcaaataaacggggggggacctaattaccggggggggg
ttggaaaatggacttttaaaaaccctaaaaaggatcaaaatgaactaaat
ttaggctttttagagtaaaacaagaaactttccttttgggagatgggaat
tttttcaaaaattaataaacggggggggNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNggggggggggcgtttatttggcacctaagagtatgctgaca
aagcagaatttaacaaatttatcaaaatttatgctTGCACGGTGAACTTG
CTCACGGTAAAGAAAGAACTCGgaatggaaaaatatttctacCTTTCCTC
GATGAAGTAATATTTGGGATCAGCCAAGTAGCTCGGTGTTTTCGTTGCGT
AACAGTTGTGAGGAATAACGCTCAAgtttttcttgtctaatgacAACTCA
AAGTAGATTCGGTGACTGACTTGGAGATATATTGGAAATTCTTCGGTGCC
GTAAGAATCGTCGTATGCTAACGATTTGTAAACTTGGAAATCGATCCTGA
ATGATGCATTCGCCTCTGTAGGAGTCAAAAATATTTGTATGATATAGTTA
AGTCCCCGACATTTTCGAATTGATTTTTCTGATAGGTCTGGATATACCGT
GGCTCAAACCGCTCTGATTTTCAGCCCGACAGATTGAGAAAAACTAGACG
AGAGTGacgtttttttatttggatgtgTACGcgcttttgaaatcaaagaa
taTTTGAAATAGATAGCTATGATATGACATCACCTTTACCatgtaggatt
ttttcagcgaGTGGAGGTAAATGTAAACGGACAAAAACTATGggaattga
tattcccatgttttttttatggctgTGATTTggattccattgttttcgag
ccaggaaattcagtggggatggaaaaatagcaaaattatTTCCAGTGGGA
ACAGGTCTCAGTGGGTCTGTCAGAAAAGGGCGTGATATGATGGCAATTAA
TGGGTTAAGACATACTAAtaatctaataaaaaaaaaattataccttTATA
TTCATCGATGTGAAGTGTTTGTGGGCCAACTACAATACCGCCGTCCCCAG
GGATATGCGAATCGTTTTGTTGGCCTTTCAACGTCTTCAAATAATTCTTT
CTTATACGACATTCCAAACCGATATAGTAATATTCGATACGCTCGATTAA
AGGGTTTGCTTCGATCTAtccaaaaattgaaagtaattttatACAGCGTA
tccagaaaaaactaaatttataTAAGTTAAATTTCTCATACTTTATAAGG
GTTTTTGATTTCAATTCGAAAGAAGGCTTAAAGCTACATATTCGTGAATA
TAAGGGCGATGACGGAATAGCCTCTTCCTAATGCATATTTGTTCGAAAAG
CAGAGAGATTAAGATTAAGTACTAATACCCCGTCCGTTACCCGTCTCTTC
TATATCTCTAATTATTGATATCTACCACTGGCTGAACTTTTAAGCATTGT
GCTCTTGCCAAACTTTAAATTTTACGGGGTCCGagctaaatttcaaaata
gaaaaattgcaattttgttaatttttggaCTTAacttattctggtctgta
aaatttataaaatatatccGTGTCAGAAAAACTCCTCTACTGTGCGTACT
TTCCAAAATTATAAAACAAGTGCTTTTAGGGGGAAAGTGTTCGATTTTTC
AGGTCgttcgacttttttagtcaaagcacttgttatacatttttggaaag
ccaaGGGGTAGaggaatcaaaataacatggatgccaatttttttttgggc
aCTTTGGGGTGTTTCTCGGAAAAaaatgacggtctcaggcaaaaatcata
gggtcaaaatttaatgaaaattttagcttaagAAAATAGaaacctgttgt
atatttttggaaagttctCTTAAATTTTGACTCAATGACTTTTGCCTGCC
TACAAGTGCTATGACTAAAAAACATGCGAATTTACACATGTCTTCCCCTA
CTACTTTGAGTAAAAGAGCGGAAGAACCTTAATCAAAACGAGCATATTCC
CCCCTACCCCCAGAACTGTGAGCAATGATGAAAGAAGACTCAACGAAACT
CGATCAGATcgaataaaaacaaattttgattaaaaattgaattaattaaa
ttaaaaaagtagacggattggaaaaattttattttttagtaaaaacgCCT
CGAAAAAATACGAAGAGATACAATATTGAAGTGTGGCTAACTGAAGTATT
CCGAAATAAATGGATAGAATGATTTTACAAATACTACTCATAGTTGTTGC
CTTAACTTTCACCACCTCAGAAAAGATCATTGGCATCTTTTCAAAATGTG
ATGGAAATTCAAACAAGACAGATTTGCAAAGGAGAGCTGTTCTTTACCAT
GATGTCATTAACAAAACATTCAATCTTGCCAAAGAACGGTACTCGACATT
TGGCGACCTTGAATATCTAAGTTTTGATGTTTGTCAAGATCGTGATCTGC
TGATTCGTCTAACAATCACGTTTATATTGGATCTTGAAGTGAATTTACAA
TTTAATGCTTCTTTAATCAAATTCAACGATAGAGGCATAGTCCTTAATTT
GAGACACCTTATTAGAAGTAAAAGCAAAATctggtttttcatagttcaca
TGGATAAAGAAATGACCGAATTATTTTCGAAGTTGATCACGGCAAGACAA
TATTCAGATGtgctaattttaaatcaaaatagcaGAATAGATAGTTTCAA
CGAtaagaatgttttttattttactttagttGACTTTTTAGAGCTAGAAT
CGAACATTTTTGCTAAACACATGGAAATCTTCAGATGGAAGCGTTTCGGG
TTATTACTTTTAAAAGGTTCGGGAAGAGATTCCAGTGAGTATTATATAAA
AATGCATCAAAGGTTCATTGACACGATTAGCCAACAAGACTTGTTTGATA
CTTGCTATTTTACAGATACTATTGACATTCAAAATTCTACCAGCTTTACC
AGAGCTGTCGACATTTTACATCGAGATTTATCGCACAATGTTTTGGTATT
GTTTGGTAATCCTTATGATCAAATGAAGTTTGTGAAAACTGTAAACATTT
ATTCTTATACAAATGTTATCTGGTTTACTCACGACCTTACAGAATCTATG
ATAAAATCAGCTTTCCCATTTGGTGATCGAGAAGAAATTACGATGTTCAC
CTACAAAACCAAAATGCGTCAATTAATCGTAGAAAAACAGGGAAAATTCA
AAAAGCAAATATCTCTACTTGAAAAACActttgaacaaaataaaacggtG
GTCGAAACAGCATTTACCTTTTTTGATACGATCTTTGAAGTGATTGGTGT
AATGGGtacaaaaacaaaattctttATATCATTCCCTCTTTCAAACACTG
GCGTGGTTCTTATTAGAAAGAAATCACGTTTGTTCACATACAAAATGCTG
TTCATCTACGAAAAAATGTTGGCCTTCAGACTGAAGGAAATAAATGCAGA
ATTTAGGGAAGGTGTCGTTGAAACTACATGTGAATTATATCAGTGTCATC
CAGGCTGGGAACAAAGCAGAGGAAAACGTTTGAAACAATTCACGAAATGG
AATTCCGAATATGGTTTTACTTGTAAACAATGTCAACAAAACTTCATCAA
ATTCAACAAAGgaaatgttgaaaaatgtcagaaatgtCCTCGCTATTATC
TTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNACTTCATCAAATTCAACAAAGgaaatgttgaaaaatgtcaga
aatgtCCTCGttattatctttccaacgaaaatCACACTGAATGTTTTGAC
TCGTATCGTAAGGAATTTCTGGTCAAAAGCACAATCTATTTCACGGCTTT
TGGATTAAGCTGTTTTCACATTGCATTCTGTGTTTTAACATTGATAATCT
TTATCAAATATCACAAAACACCCATTGTTAAAAGCTCAGATTTTATACTG
ACTGtaattcatttatttacttcaaTCCTGCTCAATGCAGCTTCTGTGAT
ATTCCCTCATACAGAACCGAGAATGGTCACTTGTTTTCTAGATGCTATTA
TTGCCGGGaacttatacacgtttttcattGCAATAGTTCTCATGAAATCA
CACAAAATATTGACTGCTTTCAATTCAATGCACAAATTGTCAACAAAAAG
CAAACGAAACACGATTCTCCAGCAATGGTTTACAATTCTCATTTTGACCA
TCTCTTCAGTTGTTTTGACCATTGTTGCTATGGAAACGCAACCCATTACG
GTTCAATCTCGAAGACAAATTTTAGACAAAGTCATATTTCTATTTTGTAG
GAATGTGCTTCCAAAAACGGTACAACTTGGATTTGCGGGACTGTTACAGG
TGGCCACATTCATTATAGCatacaaaggaagaaatttacCGGACATTTTC
AATGAATCAATGTCTTTACTTTATGCCTCTTTTGCGTCAACCATGTCCTT
TGCAGTCATGTTTATCTTGCTAAGATTCAAAAGTAAAGATCCACATTTCC
AAGCATCAATCATGTGGCTTTCCACGTCGTTGAATTCGAGCATTTATACT
TTATTATGTTATGGCAAGAAACTTTTTATTGTTCTCTTTAAGAAGGAGAA
AAACACCTTGGCATACATTCGACAAAAGACGTTCCAGTCGAATAGTAGGA
ATGTTCTAAAACCAAACGAAGAAGAATCTAGGATGTAATTTTTTATCGCG
ATTGATATGGATGTGCAATGATGAATTGAGTTCAAAGTCACTGAAATGGT
CTAGAGGGGCAATTTTTGCATGGGAAAtcagccacttatttcccatctaa
agTGCGTGACATGTGTTGTTTTCATACAAACAACGTCAGATTGAAGATCA
AATAAATCTGTCATAAATACACTATTTAAAGATTTATAACTGAACATAAA
GAATACAACAATAAACTTTCCCgtactgtttttttatttatacttGTAAT
ATATGAGGctcggaattcccgagttagaaAATTCGAGTTAGCATAAAAAC
gtgttatgacgtcatcaaacgaAAACTTTTACGTCACAATCTAAATATCT
AACTCgatttctgatttttctaaCTCTATTGTTTtcgtcaaattaaaatt
ttagatttgatttttttatcaaattgaaattttagattttcgagttagct
aactcgattttGTTTAAtagattaaaattttcaagttagctaaatcgatt
ttttttcttaaattaagATTTTCGTGAGTTGCGTGAAAGTAAAGAGAAAA
CGTTAGACTCAATCTTGGCGCAAaccttaaggcttcacttttgcttactt
gaaaaaaagattgaaggtCTCCCTCTTGGCTTCGACTTTAATGAACTCAA
GAGTTCAATGTGTGTAATAATTATACTCGTTTTATGAGATCGATTTGATA
ATTTGATAACAGCCTTCACTtcgagataaaaaatgaaaaaaattaaagtc
taAGTACTACAATTATGGACAAACCATTTGAGCCAGAGATGATTTCCCGG
CGagattttaaacaccacaaatgatttttaagcgcgttaaagtacagttg
gaaagtagagttttaactctgagttttaaaatgagtcttaggaccttagg
atctcaggatttaaaagctcgaACTTtctccaataaggcttggaatatag
cctagaagccaccgaacccctccaaaatcgaactATTTGTTATTTGATGA
AAGAAAGTCGAATATtcttgcccgaactttaaattctaaaaagacgttga
aatacactaaaatgtcaatatgttTCGACCATAATCGTAGGTACCCTAGT
ATGCAGCAAAACCTGAAACTATTAATTTGTTCTCGTGACATAGAGTAGTG
GAATCAGATTTTTATCATTTAACTTGTCAAGCTGTTCTAAATATTTAGGC
CTTCAAattcttatgttcttacatagtttgttctaaaAGTCTAATCTGAG
TGAGCTGTGGGGaagccattttgattttttttccaagtctttttttaaat
cgagctccgagtGGGAAAAACAGTAAAGTGTTCTTTTCTGAGGCGGAGta
cgttttttttgtaagaaaacatGCGTACGGtactctattctccttgtcga
tcgggaagcgtcgcccggttcggaagtATCTCCATTTTCGAAATTCTACT
TTATTGgtataatttttgtaaaaataaatactttaatcgtagaaatctta
gtgagactaattttagcgttttagcgagttttccctattttcgctaaaat
aaatctcgctaaaacacgccaaaATTGACatatcgctaaaatttatccgc
gtgaaatttctggttatattgccttgatgtatttttatcaataggaaggt
tttcagtgcaaagaaatgctagaaaacgaattcattCACTGgcgtaatac
gagtattcgctaaaatttatccacgccaattttttgaaatcatgatTCGC
TTAAAtatatccaaaaaaaatcaagatttttctgactcgctaatatacgc
taaagtTAGTCTCGCAGCGTCtctcaatttttggacctaccgggaggtcc
tttaatttgaccgttgtccgttcgtccgttacaagcttttctcgggattg
gcttattagttttttgtttttttttgcacaatgatacaaaatagcaatgc
ctaaaaagtgacggagcctgatttttgaaaaaaattttgggggggcaaat
ttgggccaaaaactacctaaaaataaggttttttggactttgtgcaaaat
tgcttcattagtttttcctgatttttggcagaaagatagagtgcaaggta
ccctaaaatgtggctgaagtaatttttctcggaaaagttttttcgtcgta
acatacggattttcgttttttggggaaattcccttttatcattttcctgt
tagcagcttttctcgggattggctcattagtttttttttaattttttgca
caatgatacaaaatagcaatgcctaaaaagtgacggagcccgatttttga
aaaaaaaaattttgggggcaaatttgggccaaaaactacctaaaaataag
gttttttggacttggtgcaaaattgcttcattagtttttcctgattttat
gCAGAAAGGtagagtgcaaggcaccctaaaatgaagctgaagtaattttt
ctcggaaatttttttttcgtcgtaaaatacggattttcgcaagtttgggc
caaaaactacctaaaaataagtttttttggacttggtgcaaaattgcttc
attagtttttcctgattttatgCATAAAGATGTAGCAAAGTtatctaaaa
agtggctgaagcagtttttttcggaaaattttttttggccgtaaaaatcg
gattttcttattcggggaaattcccttatatcatttttagggaaaaagag
catttcttgcgattggattgatattttttctgaatttttgcacttgtaaa
aatggtaatatttaaactCTGAtgaagcctgattttcaaaaaataattta
tttgggcaaatttgggccaaaaagtgcctaagaatgggatttttggactt
tgtgtgaaattgcttcattagttttttcaaattttttggacaaagatgaa
gggcaaggttctctaaaccGTGACTGAAGTaggtttttttcggaaaattt
attttggccgttaaaatcggattttcttatttggggaaattcccttttgt
catatttagggaaaatgagcatttctcgagattggcttggtatttttttt
ttattttttgtatagtggtaatttgggtagaaaagtgcctaatgtttgtt
tttttagacttttttgactaatttgagCTCTGAGctctgatactcacggt
aatctattcaagctgctcactacactttcttattcccttgctatttgtcc
tattttttctgattttgatcgacaggtaggtccattcagcatgttgcttg
tttgttctaatataaaaacgtgtaatgttTTCATACCAGAAAGTCCATTT
TAAGGCTGTCTCATAAGAAAAGGTttgttttaatttgaaaaatcatcCTT
TGTGTGGTGGGGAGGTTAGAAAATAGGCTTGATATTTTTTAACCGGGTTA
AACGGGATAAAATACATATAGAGCCTCTATAAATCGAACCTGCACGGGGA
ACACAATTTTTTGAGTCAAGGGAATTtcgagtaaggtttataaggcattg
ttaactgaaagggCGAGAGAATCTGTTTAAATTAAAGAGACATTCGATTA
ATAAAGAGACTACTGTATTTTTAATTATTCTAAAATATACATACaggaag
aaaaattttatcTACGATGAGctaacaataatttttttaaataaaattga
agttgATTAATACAGTTTtcataaaaagttatttttatctTCAAGTTTAT
GACGGTTCGAAATTTAACCCTTTTAACGACCGATATTGTATGTTCCATGC
CGAGAATACTGACGATGAGATATATACCCCGTTTTCGcgttctgtaaaaa
aaaaaaagttttacgcAGAAGCTCAggttattcttatttttccgtGATAT
TTGGGCTTCAATGTCCTTAAAAAATTCTTAGTATACTTTATTCgataaaa
aatccttaaaatcggcATCTGCTTATCTTATTTCTGAAATCTGGTGTCta
agtttttaccaaaatttatcTTCATTGTCTTATAAAACTCCTGGGGGTTC
TAGGTTTACGGGATGTTGGGTATGTGCCGTCTGACTTTTGACGGTCGGGC
CTTTATAGGGACCAAAACGGACCCTTAGAGGGAgttaaatggagaaaaaa
acctgatttttttatgaattttgtgACCCATATTGGGACTATTTTACTAA
GAATCTAGACTTTTGAGGGTCAAGAAATGagattttagctgtttttacaa
cccttaggtGGACTggacttttcataaaaaaaagcgtgttgtGCCTTTTA
AttggtcaaataaaaaaaagaatatatcgCTAATcttaatcttttgaaaa
tcttttgaaaattgttcGTGGATTTATGGTTACTCTTTTAACCAATTACA
TATATTGCTGACACTTCTAACTATATGATTTTGTCATCAAAATGTTCATT
GTTTCGTAATATTAAGGATACTAAAGGCCAGTTGCAATcacaataaaaat
gttcgaaaaatGCTCAACAATATATTGAATCGTCTCTAATTGAAATGTGA
AGATCTGTTACATTTTACATTGATTGGTTCAACGGCACTTGGTCAAATGT
TTCCGCATTTCTGGCACGTCTTCGCTGAACGTATTTAAACAACACAAATG
CCAATACGATGATGAGTAGCACAATGGGAATTTGAAGATATAACAGTGTG
GTATTTTTGTCGCCAGCGCTTTCAGTGGTGTCGTCGTTATTGTTGTATGA
TGCTTGTGTCCTGGTTGGCTTTTTGATTCTATTGTTGGTGTCGTGGTTTT
GGTTGTTTGTTGGATAATTATGGAATGTTGGTTCTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031260XLOC_031260Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049228-exon-scaffold_154-1491911889:588779..589536TCONS_00049228-exon-scaffold_154-1491911889:588779..589536Clytia hemisphaericaexon
TCONS_00049228-exon-scaffold_154-1510915933:588779..589536TCONS_00049228-exon-scaffold_154-1510915933:588779..589536Clytia hemisphaericaexon
TCONS_00049228-exon-scaffold_154-1575043694:588779..589536TCONS_00049228-exon-scaffold_154-1575043694:588779..589536Clytia hemisphaericaexon
TCONS_00049228-exon-scaffold_154-1491911889:602905..603265TCONS_00049228-exon-scaffold_154-1491911889:602905..603265Clytia hemisphaericaexon
TCONS_00049228-exon-scaffold_154-1510915933:602905..603265TCONS_00049228-exon-scaffold_154-1510915933:602905..603265Clytia hemisphaericaexon
TCONS_00049228-exon-scaffold_154-1575043694:602905..603265TCONS_00049228-exon-scaffold_154-1575043694:602905..603265Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_154supercontigscaffold_154:588779..603265 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.163175	0.116148	0.313274	0.435672	0.293161	0.0470616	0	0	0	0.111464	0	0.0938816	0.115492	0.127021	0.20096	0.216639	1.27382	2.69149	0.286798	0.389298	4.03401	5.18132	0.0794403	0.126349	0	0	0.24776	0.148197	0.119728	0.0593456
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049228 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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