TCONS_00049153 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049153
Unique NameTCONS_00049153
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1726

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049153 ID=TCONS_00049153|Name=TCONS_00049153|organism=Clytia hemisphaerica|type=transcript|length=1726bp
AACGATTTGTTCAGCCACCTGCCTGATTGCAACATTTCAAATGATGATTG
GAGAGGCAGAATCAATCAAAGCCAGCGTAAACATCTAGTTGATCGACTTA
TTTCTGCCATTGTGCCACAAGGAATCAACGAGCCAGgtacaacaaaaaca
aacaagtgGAAAAACCTTATTTCAAACGTTCAAAAAGCTGAAGAAGAACT
TTATAGTTCTGCCGCCAGTAAAGAAGACTATTTTCACTTGTTAGCAGATA
AAGTCCACAATATTCAAACAGAATTGGAGGATAAGCGCAATGAAAGAAAG
CGATACGTGAAAGAAGCGATGAAAAGAGACGCAGAAGGACAAAGGGCATC
TAAAttggaagaagaaaatgaaacgaCGGTGAAGAAACGTAAAGAAGAAG
AATGTGCTGGAGGGAATCCAAGTGAAGAGCAAGAGACGAAGGAAGTAGAA
GCAACAAATCAAGAAGCTGAAAATATAGATCAAGGATCACTTCCACTTTG
CAAACCAAGTCAAGATTGGCATGAATCGATTACTGAAACACAAAGAAGAG
AACACATTGATGAACTTATTTGCTGCCATTGTACCACAAGGAGTCGACGA
GCCAAgtacaacaaaaaacaaacaaatggaAAATCTAGTTTTATACGCCC
AAAAAGTTGAAGAAGATATGTATACTTCTGCTACCAGTAAAGAAGAATAT
GAATCTTTGTTAAACGAGAAAGTGagcaaaataaaaacagaacTCGAAGA
AAAACGATTGGACCGCGAGAAGAAATCCAAAACACGAAATCAAAACGAGG
CTAGTGCAGGATGACTATTATattcacacccctgtctcacacgGTCTTAA
TTTTTGTTGTcggtaattatattttaatgggataaactttcgcggggatt
aaacttcgcggatttcgcggatttgggtgtcatccgcgaaaatccgcgaa
attaagtcccattggaaatttggaagggcctcatccgcgaaatatttctg
aacaaaactcaaaatatgtcaaataaatactatctgaatggttacttgca
tcagaaaggcgcaaataatgtgtatttcaacaaccaatatgcatgatttg
acagtagaagtcacaaaatcgtgaaaatattgccacccaatagtgccaca
cGCGAAATTAagcccgcgaaatttttgaatttcgcagataggctcaaccg
cgaaatttaatccccgcgaaagtttatcccattaaagtagtcaTTGTTTG
TTGCAGAGGTATTGTCACCATATTACACAAACACAtttattttctctaaa
attaatTGCTCATACGATGTTGGTCTCGATATAATTCATACAGTAATTTA
TTATTCGATCACTCAAATCGCTGCATCCCCGTATAACAAAACTACTTAAG
CAATCATCATGGTgagaaaaaatatctaaaatctaTTCTTAATGCCTGAC
AGCTCTTCATTCGTTAGCTTTTCGAGTTTTTTTCCCAAGTGGGGAGGGGA
TCCTAAAGGTTAGGATACGAGGGTGTTCTGTAGAAGCAATAATACTTGGG
TCTAAAGATATCACTAAGGAACCATACTTAAGTGTCCAATTACTTACCGA
AAATTGTCGTTAACTGTAAAAttgaaggaattttttttttaatatgtaGC
ATAGACACTGAATAAATctgtaattttttgtttaaataatctatttcata
tttttttgcgaTTTATATCAAACCAT
Run BLAST on NCBI

transcript from alignment at scaffold_153:140644..165923+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049153 ID=TCONS_00049153|Name=TCONS_00049153|organism=Clytia hemisphaerica|type=transcript|length=25280bp|location=Sequence derived from alignment at scaffold_153:140644..165923+ (Clytia hemisphaerica)
AACGATTTGTTCAGCCACCTGCCTGATTGGTACATTTGTTTTTAATGgct
attttgcaaaaaactgtcactgaaaaaaattggtGTCATATTTGGTACTT
TTCAGACCGGTCACATCGACCCTCTGCCGGGACTCAGGACCTACTAGAGC
TGTTGActtaaaattttcaccaaaggtAGATATTGAAATCTTAGGTAGTG
TGCAAATACTTGGTTGGAATTTTACAAACCATCTAAACCGGAAAACTTTG
ATCTGCTTTGACCAAgaataaaatctcttttattcaaGTACAGTTTATTt
aagtaaaatcctcataaaTTAGGAATTATCATTTAATGCGTTTTAAATTT
ACACAAAACTGGTATAGAGAATCTACCGCCCTAACATCTAACACCATTCT
TTTATCTTTTTAGTGTTAAAATCGCTAATATTAACCACCCACGAGACTGC
CtttttttctcaggattgacaaGTGCAATGATCTTGTCATAATTCCAAGC
CAATAGTATTTTCCAATCCTAAGATACAGTAACCTAGGGCTAATTTAGGC
AAAGAGGGCAATTTTGGCCGGTCTGTAAAATGCACGATTATGACAGGTGA
CCCcaacagatttataaagcccgaagggctagatagcgTGCTTTGGCTGT
AAAGTGAGCCGTATTTCGGTAGAGATCCTACcgaggtcacgtgacattac
aatagaatttcggCACAAAAAGTACCCCAAAAGTATATGACACGTGCTCT
tgttttcacagaatttgaccATGAAAAGGTTTCTTCGTGATCTATTTTTT
AACGGAATTTGTAGAAGGAGCTGAAGATTTACATCGAAATTTGAAAAGTC
TAAGAAAAAGTCTTTAAATAGTAAAAGTCTATAAATGGTACCTGATGGTG
ACGTATTGTTTTGTTGATTTAGATTCTAATTAATAATACAAAGGACGAGT
TCAGTTTGAGCCATCTTAACGCTGTACGTTAAGATGACTCATTTTTACTG
GTAGCATAAGTCAGGGTGGCCACTAGTCCTGGAAAGTCCTGGAAAGTCCT
TGAAAGTCCTGGATTTTGTTTTAGTCCTGGAAAAGCGTCCTGGAAATTCA
GAAAATTGGTTAAAGTCCTGGAAAAGTCCTGGAATATTCTTCCTTGTTAG
TCCTGGAATTTAACCTTTCTCTATAAGCGATCAAGCGTGAAGGAATTTGT
ATTCTAATCAGATATTTATTGCTTTTATTTTCTGTAttctactttaggcg
tagaaactttcgcgagcagaaactttcgcgattttcgcgaattttggccc
ttttcgcgaaagtaaatgtccttaaaaattctaggaagggccattcgcga
aagtttatgctagATCGGAAGAGCGGTTCACAGGAATGCCGAGACCGATC
TCGTATGCCGTCTtctgcttgaaaaaaaaaaaaaaaNtgcgaaagtttat
gctcgcgaaaaattcttgacaaaatagaaaatctgtaaaacttcaaactt
tgaataaaatgtaacttttatggcactttttagcctgctaaaagactaat
aagtcaaaggacaagtGTTCCAAGCcaacccaagaagtatttgtgtctct
aagctattttttcatgtggaaattctcaattttacgccttgattcgcgaa
agtttatgctcgcgaaaaatatttttccgttaaattcgcgaaagtaaatg
tcgtgaatttcgcaatttttcgtcctcgcgaaagtttctgctcgcgaaag
tttgtacgcctaaagtaatatCTGTGTTTGTAGAAGTcataaatattgtc
aaaatcgtCAAACATAATggcatactctcgggtaccgaTGGACGGGGTTT
TGAATTAAgcggttggaaaaaatctcaaaatctaatCAGGGAGGTTGGaa
tagcataccgcagtgaatctaaaaatagacattgatttttctgtttgacc
gaaattcaatcccatcacccttcgCGTTAACTACGCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTCATAAACAA
TTCTGCTGATTTTACCTTCGAGGAGTTCAAATCACTatgaatttttataa
tttgtgtACACTTGATTGCTTTCGTTTTGTATTTTAGAGCAACATTTCAA
ATGATGATTGGAGAGGCAGAATCAATCAAAGCCAGCGTAAACATCTAGTT
GATCGACTGTAAGTATACTAGTTTaacaagaaaaaggaagaaaatggGCT
CGTTTGTTGgtttttgtgataaatttcagataacaaatctttttgaaaat
ctttttacagttttaaattttctgtacTCGAAAATATTTTATATTCATGA
CTTTAATGACTCATGACTACCTTTCTAATGAGCACAAAATTACaaactat
ttcaaaattcatttgcaattttcgtaaaacacacccttacagtgcatttc
tgtttccttgaaaaacaCAATTGGTCCCCGTCGGTCACCTTGACTGGTTG
CAACCCCGACCCTTTACCCCAGGGTCACTGCTCTTAATCAAAAAGTAAGG
atatgttggacggtgaaaaagaatgcggctattatattttgatttttccc
NGTTTTGTCTGAATAACTAAggcaaataaaaacaaaaacaaacttcgcaa
tgtggtggcggattgccGCCCCCTTtaagggcgcaaaaagggcgtaagta
gccaaggatcggagaaatgcctttttaactaatatNTCagtccgttctca
agggaatgatatttctatataaaaaaaagtgtttctatacaaaattattt
gacgtcaaattggaCAAATATGTCATTTTAGGCGATTTCGGCTTGAAAAT
GGGTTGGTGTAAATGGGGCCATCTGATAAGTTGAATTTGGTCTAAAATGA
ACGTGTAAATCAGACTTAGGCGCTCGGTTGGAGAAGATTGAGTTCTTGGT
TCAATCATGAGGTGTGAGGGTTCTCAGTTCTttgatccagaagttttctc
tCTGTAGTATTATCATTTTCATTCTTTCTATATCTGTCTCATTGATCTGC
TCGATGATGGTGAACTTTGCGTCTCTGTTGAAATCGTGGTTGGTTTGGTG
GAAATGTTTACACGCTGGGATTGTCTCTTGTCGTGGTCTGTATGCATTAC
TTCTATGGTTATTGAGTCTTTGATTGAATTGGGTCTCGCTTTTTCCAATA
TATTTGATGTGACATTAGTTGCATTCCAGGAGGTAGATGATACGAGTGCT
TTTGCAGTTAACGTTTTGGAAGATCTGGTATGTCCTTTTGGTTTGTTGGC
TGGTGAAGGTTGAGGTTGACATTATTTGTTTACAGCAAAGGTTTCCTATC
CTTGTTAAGCAAGGCTGGCactttcctttcagtttttgttgttttcttgt
gACTTTGTTATCGGATATTGATGTTTGTCCAAGTAGatctttcaagtttt
tgttGCGTCTATACGCAATGACTGGTGTTTGTTGGAAGGTATCTTGAAAC
CGTTCGTTGATGTTGAGGATATCAAAAAGTAAGGACAAGCACAAGAACCC
CACAAGAACTGTCCATTCTTTTTTCAGTATTTCTGCCATTGTGCCACAAG
GAATCAACGAGCCAGgtacaacaaaaacaaacaagtgGAAAAACCTTATT
TCAAACGTTCAAAAAGCTGAAGAAGAACTTTATAGTTCTGCCGCCAGTAA
AGAAGACTATTTTCACTTGTTAGCAGATAAAGTCCACAATATTCAAACAG
AATTGGAGGATAAGCGCAATGAAAGAAAGCGATACGTGAAAGAAGCGATG
AAAAGAGACGCAGAAGGACAAAGGTGAGTGAATTCTTAACCTCCTATCGG
AATGAAAAGTGTTGacataaaaaaattctcaaaaatagcCTTTTTAACTT
TGAATACCGTATTCGAATGAACAccccgggcgtttattaaaCTTTTAGGA
TTTTAGGatgggcgtttattcgaggggggggGTGGTTATTAATTGATTTA
TAAACAAGGTCACTTTAGTAACGTTAATTGAAACCATTTTGCCTTTTCAT
TATTATTTCAGTACAAATATGTCAATTTAGGGATGTGGAACTTCGTCAAA
ATCAGttcgaataaaaaaaagaatacaATCATAGTTGTAAATCTATGTTT
TTCTTCATATAATACGAAAATATCAAACATTTTCCTTAAAGgacgggcgt
ttattcgagggggtgTTTAAAAGATGGACGTTTATTCGAAATAATACAGT
ATGTATAATTTAAacttaccttaagggaaaaaattttcgcgagTAATTTC
GCCAATTTGGGCGTAACATTTCGCGAAATTAatttccgcgaaacacacca
aaatggctaaatcgcgaaattcgatttttttggaGGAAGACGGCGATGAA
GTTTAATCATGACTTATCATAGAAACATTCatctttgatgttattattat
GTTAAAGTTTGTTAATGTGACTGAAATATGTcttgaaatcaatgaaaaat
atgaaaaacattttctctgtaaaaaaaaattcttttgaaatttctcaatc
tcgaaattaaattccgtgaaacttttgaaattggctcattcacgaaatta
aattccgcgaaaaatttcttcccttaagttaCCTTGTTGGATTTGTCTAA
AGACTTTCCTTGGTATAAAACGAAcaatataccttaagggaactattttt
tgcgggaactaatttttgcggttcgcagttcaagatttaatatttaatat
ttgcgggaacttaattttgtggatttctcacttgaaagaaaTTTAGAGCC
GTACTGTGAATTATTCGACCTTTGTGTTTTcaggtgtttttgaaaaattt
tgcgggaacttaattttacggtttgggtctaaatccgcaaaaaccgcaaa
atttagttcccgcaaaaattagttcccttaaggtagaacAGACTGGTGAc
gttgaaatttcaattttagtgaCTTTTTTAAACTTACTTTATGTAATGAA
TTAATTTGGAACCTACTGAAGAGTAAGTCTAatatataggggatgcgtat
cgtctcTGATATTTCTGCCCCAACTTACCtccgtcttttcttttttggac
ctaccccggtggaggtcctataaattaaccgttgttcgttcgttcgttcg
ttcgttcgttcgttcgttcgttcgttcgttcNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtatactgagtgagtgggg
tgagtggggtgagtgtagtgagtggggtgagtggggtgagtttagtgaga
atattgagtttagtgagaacattgagatcagctaaagtactgagtgagtg
tagtgagtatactgagtgagtggggtgagtggggtgagtggggtgagtgt
aatgagtggggtgagtggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAGTCTGTTCGAATAATTGTAGGGGCGTGTTATTTTTAT
CGATTTAAATCGATATTGGCGGGATGATTTCTGCGCTAACCGCCCGGGAA
ATAGTTACCACCAATCTATtcaatttttggccaatttgtTTGCCAATTTG
CTTTATGTAAAATCTTTCGACACTCCTTGAAGAAAATTTCAGACTTAGCG
TTCAAGTTTCCGAAAGGCTGGAAAAAACCCACATTAAAACctcaaaattt
aacattttttctacTACAACTATTTTTACCAGAAGCGATTTGTTCTAATA
ACCGTGTTTACATAAACAAAGTGTAAAGTCCGGGGGTACATGCTATAACT
GGTTTCGAAGTCTCAAGTATCAAGTAAAAGATTAAGAATGATAGAAAATA
CTATAAATatgcttttttttaatttaaaaagatttttttaacagATTGGC
CTGAAGCATTAAAAATTTAGTTATATGTACCGAAAAAGTGATTTGCTTTT
TCCATAGGATTTTAAATAACCCCCGTCACTCAATTAGGTTAAACAAAATT
AATCCCGAAATATGAAAAGAAGATGGAAGCCGAGATGTTTAGTGCTGATC
GTTGATGTGATTCagaattttattttaagttaATTAGAAACTCGTGGGTC
ACTTTTACACTCATATTTTAATCAAGAGATGTTTACTAATGAAGAATCAA
CCTGTATTCTGTGATGAGGGTAGCTGTTTTATGCTGTCTTATCTGTTTGA
TAACTGAATGTGGTGAGTATCTTTTTTGATTGCTttgtatttgatttttc
attGAGAGCTGCTTTAAACATGTTTGTGTTTTGTGTTTATGTTTAAAGGT
TGTTTAATTCTTGAGAatactaatatttttattttaaacaacTGGAAAAT
ACCTCCATACAGGCAAACTTTCAAGATTTGACGCTGGCACAGCCGCCAAC
AAACTAAGATTATGGCTTCTGCCAGTCTGGAAATGCGGCTTGTGCGTCGG
ATATCTCTGGCGTAGATTTGAGGTTCTAAATCTGTGGCCTTCAACTTTTC
CCAGTTAAGTTGGCGCAGCTCCGGCGTAACATTTCCTTCCTTTCCAGACT
GAGGCTTCTGAACTTTTTTGGGCCACCTATGGcaattttaaacttgaaaa
agtCCCAAACATGATCTGAACTCGACCGTGCTTGTTTGTGGCTTGTCTAG
GCCAGATTTTTGGAGTtccaattaaaaattttttggccccaacataatat
tttgctattttggCCTGAACATTATGACCCTAAGATGTGGTGGGGTATTT
TCTCAGgccataccgtaagttggtctaatgtcgacatccgtcttctaatt
tcgacattcTTCTTTaactttatagataggaataataagaaggtcgaaat
cactgatagactaaagatttttcctctaatcgcgctaatcaaagtcaatc
agcgattccgaccttccccagtttctattgttcctatctctaaagaaggg
tgtcgaaattagaagacggatgtcgacattagaccaatttACAGTACTAC
TGTGGGTTATGTTATGGCTGCTGTCACCTTTTTTGAGAGATAAAGCTTTG
AATTAATGTTACATGATTAGAATATTTTTAAGCATAACTTTGAACAAACT
CAATGATACTTTGTGATATTCAGTGTCAGCATCATCACAAATGCTATGGA
AAACTCATAATACTATAGCATGGTTACTCCAATGTGTCCAATTAATTGCT
GCTTTGTTTGGTATATATGCagtaaaaaatccaaaaacttgAAAGATAGG
TATTCTTACCCACAGTGAAGACGAAGTGCTCATGTCCAATATTTTCAATG
TTAGCTTTTTTggcttatgcaaataaatggatagaaatagaaatagaaat
agaaattaagCTGAAATGAATGCATTAAAAAGTCCAAATTCAACCCTGAA
GAAAATTCAATTCGGCTAAATTTTAGGCCAAAATTGATTCTCgttaaaat
taatcaaaatctttgaaatcaaCTCATCTGAACCCGGCTTTATTTCCCCA
CAATATATCGCAACTAAGAAGTAACGCTTTTTCACTGTATACATTACTTT
ACAATCATACAAGGAAGATATTGCATTTAGTCACTTTAGTATTCTCACAG
GTATTTCAATAGGCTAGAGACAAAATGCTGAATGACAgaatgccggaacc
ggaatagctgttccggccggaatagGCTGGAATAACTATGccgcggaata
tgatttttaattatcgtattataataataatataataatctttctctttt
tcaCCCCTGAGGGTATATCTATGTACATAATCATCCATAATCACCCATTA
CCACCCATAATCACCTATAATCAGCAGTCGGCTACCTCATTGGCTGTTTT
TTCGTATGTAAAGGAATGCACTACTTTGCTTGTGAAGTCATTCGAATATA
CCTTTCCCGGGGCGTTGTTTgggattttatgtttgagtgtTTCCCTTACA
TATAACTAAGATTAATTATACCTCACGGAaaatttgaccggctaaaaacg
cctTACAACCCGGCAATCGTCCCTACGAGGACGTCCTGCAGCGTACCTTG
CGACCGGTAACGGtggagtgatgaaatttggcatgctttcccccttcgat
atgcttgacgtctccagaaagtttcaagtcgtgagacctacccagtccgg
cgctaggggagGAGTTCATTTACGGTCCCGTACGGGTCCTTTACGGTCTC
GTAGCGCCCTTCCGTCAACTTTTCGGacctattttttttaaatctacacc
caaaaggacatgttcataaaaaaaggcaagtttttgaggtttttgtgaca
ttttagACCTATGTTACAAAATTAGCCTATATTTTTCTAACAGAATTTGA
TCCTTCCCAAAGAATAACATGATGGTTAGCTCATTAGATTTCTGTTGGCA
AATTATGTAACAGCAATTTCCAAAGTTTAGTATATCTCAAGTTATGATAA
TTTGAATCTTGCCAGAATTCTGGCTAATGATGTAACAttgcaattttcta
aaaagctGGCTAATGACTCTAAAACAGCTATTAGGCAATATTCACATAAA
AAATGGTACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNATGTTACTTCTTTAGCCAATATCT
TCAGTTTAACGATGTGCAATTTCCGCGAATAACAACAGCGGTTAGGTAAC
ATactaaagtttcattttcaagccttgttctaattattttcacctgaaat
aaaaatttaggtcatttataatgaaaatgttacatttttagccattttcg
gCAAAATAACCTACAAATCCAAAATCTTTCAAGTCTAGTGCCTTTGGACC
TTTGTTACCTTTTTagccaaaaatttttattgatctagaggctattttga
agattttatcaacataaaacgaatttttcttaatttttgaatgTCACAGA
GCTTGCctttttttatgaacatgtccaaaaaaacatgaaacatcaaaacc
tggataaaaattttaaaggtgacCATGACCCGCTTGGATCCGTGGACCCC
TAGTGCGTGAACCCAACGCTTTAAACCACTGGGCCAACTTCTAGCCGTGT
GGTAATGAAATTTCTCAGCGATCTTATACCTTTATTAGCTTGACTTGGCC
CGGAGCTCAATAGGGACCCTCAGAGtatttttttagacttggcTGAAGAT
GTACGTCAGCACCAAGTGGTTCACGTGTTGTAGAAACGTCCCACTGCTTT
CCATCCCACCGGGGACTCTAATCTAAGCTGGTCTGGTACGATGAGTTCTG
ACCCCCCCTCTAGAGCTCTAGAGCCTTGCCATGAACTTTTCAGGACGTCG
GACtactttttttggaatctacacccaaaaaaaacataaaatatcaaaat
ctggTCAAAAATTGGGACTTTCTCCCGAACCATGGATGTGGAGCATGCGC
ATGgatagacaggagacccgttgtgtgtttttttataatttgatgtacac
aagacaggttcgagctgtgagtccaatttttacagtgggaagttcgaatt
tagcgctgtcctcacttactaaaataaaagccaaatttcgaaagttgcac
tttctctaagaaagtgtgaccagtaaaagaataacaaaatttgattggct
atgttttcaactgttattaggatctgagaaattcaaactctcagcccgta
ccatgctatacatttcgccatcagtttatcaaagaagaaatcatagcatg
gactCCCAGGCTAGCGCATGAAGGCCATGGAGTTCTTTTGTTGGGACTaa
ttgaggcctctacagccctcCATATACAGCCAGGCCTCGTTTTCATGTAA
TTATATTTCTAGCTCTATCTTAGTTTTATATGTAAGGGAAACACTCAAGT
CAAACATACAATCCCAAACAACAccccgggaaaggtgtattagaaNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAACATACAAT
CCCAAACAACAccccgggaaaggtgtattagaatGATTTTACAAGCGAGT
GCATTCCTTTATATATGAAAAAACAGCCAATGAGGTAGCCAATTGCAGAT
TATAggtgattatggaaaaaaatataaaatcatattctgcaaaaatcggg
aaaattagtaaaaaatgacccttgaaacccttgaatttgttgaaaaagaa
aagctgGCCACCTTTATTGCATTTTTAATAAAACAGCCGTAATGACAGCT
GCAAGCAGGGGGGGTACCAAGTCAGTGTACTGtaccatagggtactaact
tgatttttggattttttttccaaaaaactagaccaccaccctttttagta
cactgtactaacttccTTCCACGGtcgggctttgacaccaccctttcagt
acactgtacCGACTTTTCTCCATGACAGGATCTTTGATACAACTCTTTtt
gtacactgtactaactttcttCCACAGATTGGGCTTtaacaccacccttt
tagtacactgtactgacttTTCTCCATGACCGGATTTTTGATATCACCCT
TTTAGTACATTGTActagctgttttttttttctcggtCAAATAAGTCAAA
TTGCCACCATACAGTATACAAAGGATTTAAAGCATTTTGTCAAGAAAAGC
ACCAAATTATATAAagggaaagatttgaatattattaGAATATTTGAATC
ATTGTAGTACAAACACTGAACACAATGAAACAGACAAAGTCTTTCGAATA
CAGTGAAATTAGCTGAAATTAGCACGTCAAAACACTCAAAACCAACTTTG
AGTTATTTCCCTTCCTATGACTTGATTTCTGGTTGTCTGGCAAGCTGTag
cagtttttcatttttgaaaaagaaaaNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaa
ttatgaagttctctggaatttcgattgcatttattcaggttgatttttta
tgacttctaatggtactttttctaacgagtttgattactctgttctcaca
attatgtctttttttttgcgtccttttccgtgattacttttatttatatt
tttaaagacaggtaagcaggcatattgatgtaactgatcgaatggccgat
tcctgggtaatattcgattgtgttcgattgcgtttgagtaaTGTTcaatt
gatagttgactatgttcgattgatagttgactaNTGAAGGTCTCGGACAA
ATACACATGGGAATTCTCTGAGTTTGTGTGTTTTCACCACTGAAATTAGT
ACAATGTACTACTTCTTATTGTGTATTGGGTGGCCACTGGTCCTGGAAAG
TCCTGGAAAGTCCTTGAAAGTCCTGGATTTTGTTTTAGTCCTGGAAAAGC
GTCCTGGAAATTCATAAAATTGATTAAAGTCCTGGAAAAGTCCTGGAATA
TTTTTCCTTGTTAGTCCTGGAATTTAACCTTTCTCTATAGCTAAGCGATC
AAGCGTGAAggaatttgtatttttatcaGATATTCATTGCTTTTATTTTC
TGTATTCTAATATCTGTGTTTGCAGAAGTcataaatattgtcaaaatcgt
CAAACATAATGGCATAACTCTTGGGTACCAATGGACGGGGTTTGGAATTA
AgcggttggaaaaaatctcaaaatctaatCAGGGAGGTTGAAATTAAAAT
GCCCTGctgggtggaaaactttggaAAAGCAGGCTAATACagaagaatta
gggcaaaagagggaactatcaaaaatattttcccaaaacttaattagcag
ggggtgggtggaataagaatgtcatgggtggaaaatttttcaaaaaatta
attagcgaggGGTACACTTATTAGGTACCCAAGAGTAGTTTGGCTAAAAG
CCAAAAGCATTATCGTCTAAAAACTGGTTCCTACATGAGACACTTATAAA
ACACCAGCTTTATGAATACACCCATTGAAGTTTTTCAAAATATCACGTCC
TATCTTCGAAAATATTATCTAGTTGCGTTTCAAAGAGATAATCCTATgtt
tctgtttctaaaaaagtgatattTTCCAATTGTTGATGAAAACGATGATG
CACCACTAAAATTGTTTAAGTTGGGTTTTTGGGGGGAGAAAGGGGAAAGG
GGTgccaaaacttttttgttaaatCTTATTAAAAGTTGGACTTTGTGCGT
CTTAAACTGCGCCCTGAAATCAATTTTGGTGAAAtaagttttcaaatctt
tcatgctcgctttgctcgcaataagattttggtaatttttttgaaatcta
gttttgcaattttttttgacaatctAGCAGTTTCGAATGGTAATCTTAAT
GTGCGCCCCATGACCAATTAGCTGAATGCAATTTAAAACATATAACCCAA
TTTTTTTCACTCGAAAAGTAATTCGAANGTAATCTAACTGTGCGCCCCAT
GACCAATTAGCTGAATGCAATTTAAAACATATAacccaatttttttcgct
cgaaaAGTAATTCGAAATCCGTAGTGGttactttaaaaacaaaaatacaa
gaGTAATGTACGGTTAACTCTCACTTTACAAAATCTTTGTCGCCTCAAAA
TATCCTCAACAAGTAAGACAATTTGTAAGATTCTTTTTAAAGCTATGTGA
TTGTCTATGCAAATCTTCTattggcccagctagctttagtgtagtgggcc
tttcattagcattctgcccggtgtcagtgtgtaacaatttactaggcgat
acgcgttttATTTCAAGCACCGGCTAGTACATattgtgaaaaatttgatt
ggctgaaaCATGTCTCTTTTAGAACATGATTGGCAGAATAAAAACAATTG
CAATCGTCTTTATTGgtttaaaacataaaaggagaaaatacaattaacta
CTAAAACTATAGAATATAAcagatgtacacgtttttttttattagaacac
ctaaaatttggctgagcctggatgtgcttatttttttagcaattttcagt
cTAAAATGTTCTNtattagaacacctaaaatttggctgagcctggatgtg
cttattttttagcctaaaatgttcttaaatgcgttcctAATTTTTCGGAC
TACTTTAAATCGACaacatcatgcaaaataaagagctcttaaagttggta
aaatttggacaatatttgactctcgattttagaaaatccatccctaagtt
tggttaaaactgcttgaaaagaggaaagaattgtagtttcttgtcatttt
tttccaaactgaggctgggctgatgttcttacgatgttcgtAATTTTTCG
atgaatttcagcctaaatgttcttataaactgggttctaataaagaaaac
gtgtagtacgttttattaaatattttgatttatttctcaTTGTTGCTAAT
AAGAGATAGGCGAGTGGTTTAAGGCATCTTTGGCTTGTACTAGCGACTTT
AGGTTCAAATCCTCTCTGTTACTtaagtcttgttcagttcatatttttat
ttgctgggccttcatgccctctgggcttctttTCTTCTTGGTTAAAATCA
AATTGGCCCATTCTCTATTTCGTTGCTTTGGAGCAAGTTAGAAAAAGCTT
TGCACCTCATTTTTGCGTTAATATTTTTCACATACATAGCTCAGTTCCAG
GAgaaaatgcttttcttttagGATAAAAAGtcctggaaaattttaaaaac
atcctGGAAAAGTCCTTGAAAAGTCCTGGAATTTGACTTGATTTTTTGAG
TGGCCACCCtgataagtagaaaaaaagcccaATTTTTGCCATCGCAAATt
caaccgctaaaaatcgcgaatttttcaaccaaaaatacattcaaatatag
cgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGTGGTGG
AAGGCACAAAAAATTATCTTCCTTTCTCAGAAAAAAGCTATCATTTTGTT
TCAGCTGaaggtaacctgataacagctgttcgtaattttcttaggtgcac
ggtaaacctctgaaggcacttgaaaattatacacatctgaggaaaatagt
cctcccgcggaaaatttcacaacaagaatcttgttgtgcgccagaaagtc
aaaaactgatacggcgccctattcacaaacacaatcacgcaactttgttg
tcatccccagtccttatAGACGatcgcggtccttacgattttgagattgc
attttcatcagatcgtatgttttcacccagtgggttcgactgacaattcc
tgcattaaAAGCCAAGATGCAATATGTTTATTAAATACACGCTCACAGTA
TCTCTAGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTCTGACCTCATGAA
TGTAAGAACCAAGaattaaagactttgttttggggTCACTCGGTAAACAA
ATCTCATATAACTTGTTCCAGAGACATTCATTGTCCATATAAGACTGTAA
GAGTTtgtatttcaaagcaaaaatatttctcgtactgcctatttttctca
tcaattcttcaacttgaaccagtttcacatctcaatagaatgttaatacc
attttgccaatcatttaatgtccaaaGTTATGGGGATGTAGCGTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNatacatcaatgttcttagtcaaattactcaattcttttatgagataga
tgtttttttttgctcacgagggcttacttttgaagaatgtgtgtgtttag
aaatgaaattttggctacttggcgtgtttttggccaaataagatattttt
ttatcagcacattatcaattacttctAGGTATTACCTTTTCTCGAGGTTG
gcgctttcattctttatgatttttttcacaaagatgcataactataaacc
ctcgaatgtgacggagcccgattttcaaaaatacatatttttgggcaaat
ttgggctcaaaaatgcatgtttatctataagaatcacaaacgcacgttcc
gcaaaaattgataattatgaaaacaacagcacaatgacttcatttttttc
attctttgattggatgtgacgaaattatgtaaatttatgcaaattttggt
taccccaaatttaaggtaactctcggacgagaatttcatacacgatacgc
atttCTTCTGAAGGATATCTCAAAGTAAAAACATGGTCAAGTAATCAGAT
TCAAATTACTAAGTGACCATTTTTAGACTTACAGACGAATTCTTCTTAAA
ATGATTCTAAAAAGGTCAGAGTgacatttttcaagctttcatCAAGATTT
CCTTCAACATAAAATCTTTAAGAAATACGACGGTGATAGCTTCTGATAAC
GTAACAGCTCAAGAGAAGCGACTGCTTGAAAAGGCTTCAACCCGTTGACT
CTTTCAGGGCATCTAAAttggaagaagaaaatgaaacgaCGGTGAAGAAA
CGTAAAGAAGAAGAATGTGCTGGAGGGAATCCAAGTGAAGAGCAAGAGAC
GAAGGAAGTAGAAGCAACAAATCAAGAAGCTGAAAATATAGATCAAGGGT
AATTCTCACTCTCATTTAAAGCAACGTTGAAGAAGTGTcaccattttttt
cttttgaatttttataaaacttaAGTTTCATCATAAGTACATCCAAATTG
ACTGAAAAAATCGATTCTCCTGCAAACTTCTAGAATTTTAAAGACAGCCC
TGCAGCTTAAAGACagccctgtgtcacagaccctgtGGGACCCccgcccc
actgaaaaatttggccaaaattctgttcccggtgggaaaattACCCCATA
ATTTCAGCTCCATTGGGAATTTGACTTAGTTTTTGTTTAGAATAGGAAAA
gaaatgcactccaaaaccatccccactgagaaGTTCTTACTTAGTTTTAC
TTTTGAAGATCACTTCCACTTTGCAAACCAAGTCAAGATTGGCATGAATC
GATTACTGAAACACAAAGAAGAGAACACATTGATGAACTGTAAGTATTTT
TGTTAAGGCTTTGCGATTTCCCAGGTGAGACCAGCTTGATTAGTTGTTTA
CGATCTCGACCGATCCTCACACTTGAAAAGAAGGTTGAAGAAGAATGTTG
TCaatattcttataatttcaTTGTTCAACTGCCagtttgtttcaatttga
aaatctttgttaatttaattttttgcatgGTATTCATTTTCATTACATTC
CATCTACTTATTTATTTCAGTATTTGCTGCCATTGTACCACAAGGAGTCG
ACGAGCCAAgtacaacaaaaaacaaacaaatggaAAATCTAGTTTTATAC
GCCCAAAAAGTTGAAGAAGATATGTATACTTCTGCTACCAGTAAAGAAGA
ATATGAATCTTTGTTAAACGAGAAAGTGagcaaaataaaaacagaacTCG
AAGAAAAACGATTGGACCGCGAGAAGAAATCCAAAACACGAAATCAAAAC
GAGGCTAGTGCAGGATGACTATTATattcacacccctgtctcacacgGTC
TTAATTTTTGTTGTcggtaattatattttaatgggataaactttcgcggg
gattaaacttcgcggatttcgcggatttgggtgtcatccgcgaaaatccg
cgaaattaagtcccattggaaatttggaagggcctcatccgcgaaatatt
tctgaacaaaactcaaaatatgtcaaataaatactatctgaatggttact
tgcatcagaaaggcgcaaataatgtgtatttcaacaaccaatatgcatga
tttgacagtagaagtcacaaaatcgtgaaaatattgccacccaatagtgc
cacacGCGAAATTAagcccgcgaaatttttgaatttcgcagataggctca
accgcgaaatttaatccccgcgaaagtttatcccattaaagtagtcaTTG
TTTGTTGCAGAGGTATTGTCACCATATTACACAAACACAtttattttctc
taaaattaatTGCTCATACGATGTTGGTCTCGATATAATTCATACAGTAA
TTTATTATTCGATCACTCAAATCGCTGCATCCCCGTATAACAAAACTACT
TAAGCAATCATCATGGTgagaaaaaatatctaaaatctaTTCTTAATGCC
TGACAGCTCTTCATTCGTTAGCTTTTCGAGTTTTTTTCCCAAGTGGGGAG
GGGATCCTAAAGGTTAGGATACGAGGGTGTTCTGTAGAAGCAATAATACT
TGGGTCTAAAGATATCACTAAGGAACCATACTTAAGTGTCCAATTACTTA
CCGAAAATTGTCGTTAACTGTAAAAttgaaggaattttttttttaatatg
taGCATAGACACTGAATAAATctgtaattttttgtttaaataatctattt
catatttttttgcgaTTTATATCAAACCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031231XLOC_031231Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049153-exon-scaffold_153-1491911889:140644..140672TCONS_00049153-exon-scaffold_153-1491911889:140644..140672Clytia hemisphaericaexon
TCONS_00049153-exon-scaffold_153-1510915933:140644..140672TCONS_00049153-exon-scaffold_153-1510915933:140644..140672Clytia hemisphaericaexon
TCONS_00049153-exon-scaffold_153-1575043694:140644..140672TCONS_00049153-exon-scaffold_153-1575043694:140644..140672Clytia hemisphaericaexon
TCONS_00049153-exon-scaffold_153-1491911889:143433..143501TCONS_00049153-exon-scaffold_153-1491911889:143433..143501Clytia hemisphaericaexon
TCONS_00049153-exon-scaffold_153-1510915933:143433..143501TCONS_00049153-exon-scaffold_153-1510915933:143433..143501Clytia hemisphaericaexon
TCONS_00049153-exon-scaffold_153-1575043694:143433..143501TCONS_00049153-exon-scaffold_153-1575043694:143433..143501Clytia hemisphaericaexon
TCONS_00049153-exon-scaffold_153-1491911889:144871..145116TCONS_00049153-exon-scaffold_153-1491911889:144871..145116Clytia hemisphaericaexon
TCONS_00049153-exon-scaffold_153-1510915933:144871..145116TCONS_00049153-exon-scaffold_153-1510915933:144871..145116Clytia hemisphaericaexon
TCONS_00049153-exon-scaffold_153-1575043694:144871..145116TCONS_00049153-exon-scaffold_153-1575043694:144871..145116Clytia hemisphaericaexon
TCONS_00049153-exon-scaffold_153-1491911889:163951..164091TCONS_00049153-exon-scaffold_153-1491911889:163951..164091Clytia hemisphaericaexon
TCONS_00049153-exon-scaffold_153-1510915933:163951..164091TCONS_00049153-exon-scaffold_153-1510915933:163951..164091Clytia hemisphaericaexon
TCONS_00049153-exon-scaffold_153-1575043694:163951..164091TCONS_00049153-exon-scaffold_153-1575043694:163951..164091Clytia hemisphaericaexon
TCONS_00049153-exon-scaffold_153-1491911889:164452..164532TCONS_00049153-exon-scaffold_153-1491911889:164452..164532Clytia hemisphaericaexon
TCONS_00049153-exon-scaffold_153-1510915933:164452..164532TCONS_00049153-exon-scaffold_153-1510915933:164452..164532Clytia hemisphaericaexon
TCONS_00049153-exon-scaffold_153-1575043694:164452..164532TCONS_00049153-exon-scaffold_153-1575043694:164452..164532Clytia hemisphaericaexon
TCONS_00049153-exon-scaffold_153-1491911889:164764..165923TCONS_00049153-exon-scaffold_153-1491911889:164764..165923Clytia hemisphaericaexon
TCONS_00049153-exon-scaffold_153-1510915933:164764..165923TCONS_00049153-exon-scaffold_153-1510915933:164764..165923Clytia hemisphaericaexon
TCONS_00049153-exon-scaffold_153-1575043694:164764..165923TCONS_00049153-exon-scaffold_153-1575043694:164764..165923Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_153supercontigscaffold_153:140644..165923 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.295941	0.530652	0.0702792	0.811873	5.32124	5.79461	2.5175	4.78724	1.47494	1.07344	2.09339	0.0529768	2.0013	0.0313975	1.41007	1.78793	0.704245	1.3732	1.71805	2.1033	1.22353	2.10072	0.565887	1.21174	2.00318	0.965592	3.33929	2.72656	1.4585	4.19023e-09
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049153 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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