TCONS_00049152 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049152
Unique NameTCONS_00049152
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1581

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049152 ID=TCONS_00049152|Name=TCONS_00049152|organism=Clytia hemisphaerica|type=transcript|length=1581bp
CAACGATTTGTTCAGCCACCTGCCTGATTGCAACATTTCAAATGATGATT
GGAGAGGCAGAATCAATCAAAGCCAGCGTAAACATCTAGTTGATCGACTC
AGATAAAGTCCACAATATTCAAACAGAATTGGAGGATAAGCGCAATGAAA
GAAAGCGATACGTGAAAGAAGCGATGAAAAGAGACGCAGAAGGACAAAGG
GCATCTAAAttggaagaagaaaatgaaacgaCGGTGAAGAAACGTAAAGA
AGAAGAATGTGCTGGAGGGAATCCAAGTGAAGAGCAAGAGACGAAGGAAG
TAGAAGCAACAAATCAAGAAGCTGAAAATATAGATCAAGGATCACTTCCA
CTTTGCAAACCAAGTCAAGATTGGCATGAATCGATTACTGAAACACAAAG
AAGAGAACACATTGATGAACTTATTTGCTGCCATTGTACCACAAGGAGTC
GACGAGCCAAgtacaacaaaaaacaaacaaatggaAAATCTAGTTTTATA
CGCCCAAAAAGTTGAAGAAGATATGTATACTTCTGCTACCAGTAAAGAAG
AATATGAATCTTTGTTAAACGAGAAAGTGagcaaaataaaaacagaacTC
GAAGAAAAACGATTGGACCGCGAGAAGAAATCCAAAACACGAAATCAAAA
CGAGGCTAGTGCAGGATGACTATTATattcacacccctgtctcacacgGT
CTTAATTTTTGTTGTcggtaattatattttaatgggataaactttcgcgg
ggattaaacttcgcggatttcgcggatttgggtgtcatccgcgaaaatcc
gcgaaattaagtcccattggaaatttggaagggcctcatccgcgaaatat
ttctgaacaaaactcaaaatatgtcaaataaatactatctgaatggttac
ttgcatcagaaaggcgcaaataatgtgtatttcaacaaccaatatgcatg
atttgacagtagaagtcacaaaatcgtgaaaatattgccacccaatagtg
ccacacGCGAAATTAagcccgcgaaatttttgaatttcgcagataggctc
aaccgcgaaatttaatccccgcgaaagtttatcccattaaagtagtcaTT
GTTTGTTGCAGAGGTATTGTCACCATATTACACAAACACAtttattttct
ctaaaattaatTGCTCATACGATGTTGGTCTCGATATAATTCATACAGTA
ATTTATTATTCGATCACTCAAATCGCTGCATCCCCGTATAACAAAACTAC
TTAAGCAATCATCATGGTgagaaaaaatatctaaaatctaTTCTTAATGC
CTGACAGCTCTTCATTCGTTAGCTTTTCGAGTTTTTTTCCCAAGTGGGGA
GGGGATCCTAAAGGTTAGGATACGAGGGTGTTCTGTAGAAGCAATAATAC
TTGGGTCTAAAGATATCACTAAGGAACCATACTTAAGTGTCCAATTACTT
ACCGAAAATTGTCGTTAACTGTAAAAttgaaggaattttttttttaatat
gtaGCATAGACACTGAATAAATctgtaattttttgtttaaataatctatt
tcatatttttttgcgaTTTATATCAAACCAT
Run BLAST on NCBI

transcript from alignment at scaffold_153:140643..165923+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049152 ID=TCONS_00049152|Name=TCONS_00049152|organism=Clytia hemisphaerica|type=transcript|length=25281bp|location=Sequence derived from alignment at scaffold_153:140643..165923+ (Clytia hemisphaerica)
CAACGATTTGTTCAGCCACCTGCCTGATTGGTACATTTGTTTTTAATGgc
tattttgcaaaaaactgtcactgaaaaaaattggtGTCATATTTGGTACT
TTTCAGACCGGTCACATCGACCCTCTGCCGGGACTCAGGACCTACTAGAG
CTGTTGActtaaaattttcaccaaaggtAGATATTGAAATCTTAGGTAGT
GTGCAAATACTTGGTTGGAATTTTACAAACCATCTAAACCGGAAAACTTT
GATCTGCTTTGACCAAgaataaaatctcttttattcaaGTACAGTTTATT
taagtaaaatcctcataaaTTAGGAATTATCATTTAATGCGTTTTAAATT
TACACAAAACTGGTATAGAGAATCTACCGCCCTAACATCTAACACCATTC
TTTTATCTTTTTAGTGTTAAAATCGCTAATATTAACCACCCACGAGACTG
CCtttttttctcaggattgacaaGTGCAATGATCTTGTCATAATTCCAAG
CCAATAGTATTTTCCAATCCTAAGATACAGTAACCTAGGGCTAATTTAGG
CAAAGAGGGCAATTTTGGCCGGTCTGTAAAATGCACGATTATGACAGGTG
ACCCcaacagatttataaagcccgaagggctagatagcgTGCTTTGGCTG
TAAAGTGAGCCGTATTTCGGTAGAGATCCTACcgaggtcacgtgacatta
caatagaatttcggCACAAAAAGTACCCCAAAAGTATATGACACGTGCTC
TtgttttcacagaatttgaccATGAAAAGGTTTCTTCGTGATCTATTTTT
TAACGGAATTTGTAGAAGGAGCTGAAGATTTACATCGAAATTTGAAAAGT
CTAAGAAAAAGTCTTTAAATAGTAAAAGTCTATAAATGGTACCTGATGGT
GACGTATTGTTTTGTTGATTTAGATTCTAATTAATAATACAAAGGACGAG
TTCAGTTTGAGCCATCTTAACGCTGTACGTTAAGATGACTCATTTTTACT
GGTAGCATAAGTCAGGGTGGCCACTAGTCCTGGAAAGTCCTGGAAAGTCC
TTGAAAGTCCTGGATTTTGTTTTAGTCCTGGAAAAGCGTCCTGGAAATTC
AGAAAATTGGTTAAAGTCCTGGAAAAGTCCTGGAATATTCTTCCTTGTTA
GTCCTGGAATTTAACCTTTCTCTATAAGCGATCAAGCGTGAAGGAATTTG
TATTCTAATCAGATATTTATTGCTTTTATTTTCTGTAttctactttaggc
gtagaaactttcgcgagcagaaactttcgcgattttcgcgaattttggcc
cttttcgcgaaagtaaatgtccttaaaaattctaggaagggccattcgcg
aaagtttatgctagATCGGAAGAGCGGTTCACAGGAATGCCGAGACCGAT
CTCGTATGCCGTCTtctgcttgaaaaaaaaaaaaaaaNtgcgaaagttta
tgctcgcgaaaaattcttgacaaaatagaaaatctgtaaaacttcaaact
ttgaataaaatgtaacttttatggcactttttagcctgctaaaagactaa
taagtcaaaggacaagtGTTCCAAGCcaacccaagaagtatttgtgtctc
taagctattttttcatgtggaaattctcaattttacgccttgattcgcga
aagtttatgctcgcgaaaaatatttttccgttaaattcgcgaaagtaaat
gtcgtgaatttcgcaatttttcgtcctcgcgaaagtttctgctcgcgaaa
gtttgtacgcctaaagtaatatCTGTGTTTGTAGAAGTcataaatattgt
caaaatcgtCAAACATAATggcatactctcgggtaccgaTGGACGGGGTT
TTGAATTAAgcggttggaaaaaatctcaaaatctaatCAGGGAGGTTGGa
atagcataccgcagtgaatctaaaaatagacattgatttttctgtttgac
cgaaattcaatcccatcacccttcgCGTTAACTACGCNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTCATAAACA
ATTCTGCTGATTTTACCTTCGAGGAGTTCAAATCACTatgaatttttata
atttgtgtACACTTGATTGCTTTCGTTTTGTATTTTAGAGCAACATTTCA
AATGATGATTGGAGAGGCAGAATCAATCAAAGCCAGCGTAAACATCTAGT
TGATCGACTGTAAGTATACTAGTTTaacaagaaaaaggaagaaaatggGC
TCGTTTGTTGgtttttgtgataaatttcagataacaaatctttttgaaaa
tctttttacagttttaaattttctgtacTCGAAAATATTTTATATTCATG
ACTTTAATGACTCATGACTACCTTTCTAATGAGCACAAAATTACaaacta
tttcaaaattcatttgcaattttcgtaaaacacacccttacagtgcattt
ctgtttccttgaaaaacaCAATTGGTCCCCGTCGGTCACCTTGACTGGTT
GCAACCCCGACCCTTTACCCCAGGGTCACTGCTCTTAATCAAAAAGTAAG
Gatatgttggacggtgaaaaagaatgcggctattatattttgatttttcc
cNGTTTTGTCTGAATAACTAAggcaaataaaaacaaaaacaaacttcgca
atgtggtggcggattgccGCCCCCTTtaagggcgcaaaaagggcgtaagt
agccaaggatcggagaaatgcctttttaactaatatNTCagtccgttctc
aagggaatgatatttctatataaaaaaaagtgtttctatacaaaattatt
tgacgtcaaattggaCAAATATGTCATTTTAGGCGATTTCGGCTTGAAAA
TGGGTTGGTGTAAATGGGGCCATCTGATAAGTTGAATTTGGTCTAAAATG
AACGTGTAAATCAGACTTAGGCGCTCGGTTGGAGAAGATTGAGTTCTTGG
TTCAATCATGAGGTGTGAGGGTTCTCAGTTCTttgatccagaagttttct
ctCTGTAGTATTATCATTTTCATTCTTTCTATATCTGTCTCATTGATCTG
CTCGATGATGGTGAACTTTGCGTCTCTGTTGAAATCGTGGTTGGTTTGGT
GGAAATGTTTACACGCTGGGATTGTCTCTTGTCGTGGTCTGTATGCATTA
CTTCTATGGTTATTGAGTCTTTGATTGAATTGGGTCTCGCTTTTTCCAAT
ATATTTGATGTGACATTAGTTGCATTCCAGGAGGTAGATGATACGAGTGC
TTTTGCAGTTAACGTTTTGGAAGATCTGGTATGTCCTTTTGGTTTGTTGG
CTGGTGAAGGTTGAGGTTGACATTATTTGTTTACAGCAAAGGTTTCCTAT
CCTTGTTAAGCAAGGCTGGCactttcctttcagtttttgttgttttcttg
tgACTTTGTTATCGGATATTGATGTTTGTCCAAGTAGatctttcaagttt
ttgttGCGTCTATACGCAATGACTGGTGTTTGTTGGAAGGTATCTTGAAA
CCGTTCGTTGATGTTGAGGATATCAAAAAGTAAGGACAAGCACAAGAACC
CCACAAGAACTGTCCATTCTTTTTTCAGTATTTCTGCCATTGTGCCACAA
GGAATCAACGAGCCAGgtacaacaaaaacaaacaagtgGAAAAACCTTAT
TTCAAACGTTCAAAAAGCTGAAGAAGAACTTTATAGTTCTGCCGCCAGTA
AAGAAGACTATTTTCACTTGTTAGCAGATAAAGTCCACAATATTCAAACA
GAATTGGAGGATAAGCGCAATGAAAGAAAGCGATACGTGAAAGAAGCGAT
GAAAAGAGACGCAGAAGGACAAAGGTGAGTGAATTCTTAACCTCCTATCG
GAATGAAAAGTGTTGacataaaaaaattctcaaaaatagcCTTTTTAACT
TTGAATACCGTATTCGAATGAACAccccgggcgtttattaaaCTTTTAGG
ATTTTAGGatgggcgtttattcgaggggggggGTGGTTATTAATTGATTT
ATAAACAAGGTCACTTTAGTAACGTTAATTGAAACCATTTTGCCTTTTCA
TTATTATTTCAGTACAAATATGTCAATTTAGGGATGTGGAACTTCGTCAA
AATCAGttcgaataaaaaaaagaatacaATCATAGTTGTAAATCTATGTT
TTTCTTCATATAATACGAAAATATCAAACATTTTCCTTAAAGgacgggcg
tttattcgagggggtgTTTAAAAGATGGACGTTTATTCGAAATAATACAG
TATGTATAATTTAAacttaccttaagggaaaaaattttcgcgagTAATTT
CGCCAATTTGGGCGTAACATTTCGCGAAATTAatttccgcgaaacacacc
aaaatggctaaatcgcgaaattcgatttttttggaGGAAGACGGCGATGA
AGTTTAATCATGACTTATCATAGAAACATTCatctttgatgttattatta
tGTTAAAGTTTGTTAATGTGACTGAAATATGTcttgaaatcaatgaaaaa
tatgaaaaacattttctctgtaaaaaaaaattcttttgaaatttctcaat
ctcgaaattaaattccgtgaaacttttgaaattggctcattcacgaaatt
aaattccgcgaaaaatttcttcccttaagttaCCTTGTTGGATTTGTCTA
AAGACTTTCCTTGGTATAAAACGAAcaatataccttaagggaactatttt
ttgcgggaactaatttttgcggttcgcagttcaagatttaatatttaata
tttgcgggaacttaattttgtggatttctcacttgaaagaaaTTTAGAGC
CGTACTGTGAATTATTCGACCTTTGTGTTTTcaggtgtttttgaaaaatt
ttgcgggaacttaattttacggtttgggtctaaatccgcaaaaaccgcaa
aatttagttcccgcaaaaattagttcccttaaggtagaacAGACTGGTGA
cgttgaaatttcaattttagtgaCTTTTTTAAACTTACTTTATGTAATGA
ATTAATTTGGAACCTACTGAAGAGTAAGTCTAatatataggggatgcgta
tcgtctcTGATATTTCTGCCCCAACTTACCtccgtcttttcttttttgga
cctaccccggtggaggtcctataaattaaccgttgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtatactgagtgagtggg
gtgagtggggtgagtgtagtgagtggggtgagtggggtgagtttagtgag
aatattgagtttagtgagaacattgagatcagctaaagtactgagtgagt
gtagtgagtatactgagtgagtggggtgagtggggtgagtggggtgagtg
taatgagtggggtgagtggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAGTCTGTTCGAATAATTGTAGGGGCGTGTTATTTTTA
TCGATTTAAATCGATATTGGCGGGATGATTTCTGCGCTAACCGCCCGGGA
AATAGTTACCACCAATCTATtcaatttttggccaatttgtTTGCCAATTT
GCTTTATGTAAAATCTTTCGACACTCCTTGAAGAAAATTTCAGACTTAGC
GTTCAAGTTTCCGAAAGGCTGGAAAAAACCCACATTAAAACctcaaaatt
taacattttttctacTACAACTATTTTTACCAGAAGCGATTTGTTCTAAT
AACCGTGTTTACATAAACAAAGTGTAAAGTCCGGGGGTACATGCTATAAC
TGGTTTCGAAGTCTCAAGTATCAAGTAAAAGATTAAGAATGATAGAAAAT
ACTATAAATatgcttttttttaatttaaaaagatttttttaacagATTGG
CCTGAAGCATTAAAAATTTAGTTATATGTACCGAAAAAGTGATTTGCTTT
TTCCATAGGATTTTAAATAACCCCCGTCACTCAATTAGGTTAAACAAAAT
TAATCCCGAAATATGAAAAGAAGATGGAAGCCGAGATGTTTAGTGCTGAT
CGTTGATGTGATTCagaattttattttaagttaATTAGAAACTCGTGGGT
CACTTTTACACTCATATTTTAATCAAGAGATGTTTACTAATGAAGAATCA
ACCTGTATTCTGTGATGAGGGTAGCTGTTTTATGCTGTCTTATCTGTTTG
ATAACTGAATGTGGTGAGTATCTTTTTTGATTGCTttgtatttgattttt
cattGAGAGCTGCTTTAAACATGTTTGTGTTTTGTGTTTATGTTTAAAGG
TTGTTTAATTCTTGAGAatactaatatttttattttaaacaacTGGAAAA
TACCTCCATACAGGCAAACTTTCAAGATTTGACGCTGGCACAGCCGCCAA
CAAACTAAGATTATGGCTTCTGCCAGTCTGGAAATGCGGCTTGTGCGTCG
GATATCTCTGGCGTAGATTTGAGGTTCTAAATCTGTGGCCTTCAACTTTT
CCCAGTTAAGTTGGCGCAGCTCCGGCGTAACATTTCCTTCCTTTCCAGAC
TGAGGCTTCTGAACTTTTTTGGGCCACCTATGGcaattttaaacttgaaa
aagtCCCAAACATGATCTGAACTCGACCGTGCTTGTTTGTGGCTTGTCTA
GGCCAGATTTTTGGAGTtccaattaaaaattttttggccccaacataata
ttttgctattttggCCTGAACATTATGACCCTAAGATGTGGTGGGGTATT
TTCTCAGgccataccgtaagttggtctaatgtcgacatccgtcttctaat
ttcgacattcTTCTTTaactttatagataggaataataagaaggtcgaaa
tcactgatagactaaagatttttcctctaatcgcgctaatcaaagtcaat
cagcgattccgaccttccccagtttctattgttcctatctctaaagaagg
gtgtcgaaattagaagacggatgtcgacattagaccaatttACAGTACTA
CTGTGGGTTATGTTATGGCTGCTGTCACCTTTTTTGAGAGATAAAGCTTT
GAATTAATGTTACATGATTAGAATATTTTTAAGCATAACTTTGAACAAAC
TCAATGATACTTTGTGATATTCAGTGTCAGCATCATCACAAATGCTATGG
AAAACTCATAATACTATAGCATGGTTACTCCAATGTGTCCAATTAATTGC
TGCTTTGTTTGGTATATATGCagtaaaaaatccaaaaacttgAAAGATAG
GTATTCTTACCCACAGTGAAGACGAAGTGCTCATGTCCAATATTTTCAAT
GTTAGCTTTTTTggcttatgcaaataaatggatagaaatagaaatagaaa
tagaaattaagCTGAAATGAATGCATTAAAAAGTCCAAATTCAACCCTGA
AGAAAATTCAATTCGGCTAAATTTTAGGCCAAAATTGATTCTCgttaaaa
ttaatcaaaatctttgaaatcaaCTCATCTGAACCCGGCTTTATTTCCCC
ACAATATATCGCAACTAAGAAGTAACGCTTTTTCACTGTATACATTACTT
TACAATCATACAAGGAAGATATTGCATTTAGTCACTTTAGTATTCTCACA
GGTATTTCAATAGGCTAGAGACAAAATGCTGAATGACAgaatgccggaac
cggaatagctgttccggccggaatagGCTGGAATAACTATGccgcggaat
atgatttttaattatcgtattataataataatataataatctttctcttt
ttcaCCCCTGAGGGTATATCTATGTACATAATCATCCATAATCACCCATT
ACCACCCATAATCACCTATAATCAGCAGTCGGCTACCTCATTGGCTGTTT
TTTCGTATGTAAAGGAATGCACTACTTTGCTTGTGAAGTCATTCGAATAT
ACCTTTCCCGGGGCGTTGTTTgggattttatgtttgagtgtTTCCCTTAC
ATATAACTAAGATTAATTATACCTCACGGAaaatttgaccggctaaaaac
gcctTACAACCCGGCAATCGTCCCTACGAGGACGTCCTGCAGCGTACCTT
GCGACCGGTAACGGtggagtgatgaaatttggcatgctttcccccttcga
tatgcttgacgtctccagaaagtttcaagtcgtgagacctacccagtccg
gcgctaggggagGAGTTCATTTACGGTCCCGTACGGGTCCTTTACGGTCT
CGTAGCGCCCTTCCGTCAACTTTTCGGacctattttttttaaatctacac
ccaaaaggacatgttcataaaaaaaggcaagtttttgaggtttttgtgac
attttagACCTATGTTACAAAATTAGCCTATATTTTTCTAACAGAATTTG
ATCCTTCCCAAAGAATAACATGATGGTTAGCTCATTAGATTTCTGTTGGC
AAATTATGTAACAGCAATTTCCAAAGTTTAGTATATCTCAAGTTATGATA
ATTTGAATCTTGCCAGAATTCTGGCTAATGATGTAACAttgcaattttct
aaaaagctGGCTAATGACTCTAAAACAGCTATTAGGCAATATTCACATAA
AAAATGGTACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNATGTTACTTCTTTAGCCAATATC
TTCAGTTTAACGATGTGCAATTTCCGCGAATAACAACAGCGGTTAGGTAA
CATactaaagtttcattttcaagccttgttctaattattttcacctgaaa
taaaaatttaggtcatttataatgaaaatgttacatttttagccattttc
ggCAAAATAACCTACAAATCCAAAATCTTTCAAGTCTAGTGCCTTTGGAC
CTTTGTTACCTTTTTagccaaaaatttttattgatctagaggctattttg
aagattttatcaacataaaacgaatttttcttaatttttgaatgTCACAG
AGCTTGCctttttttatgaacatgtccaaaaaaacatgaaacatcaaaac
ctggataaaaattttaaaggtgacCATGACCCGCTTGGATCCGTGGACCC
CTAGTGCGTGAACCCAACGCTTTAAACCACTGGGCCAACTTCTAGCCGTG
TGGTAATGAAATTTCTCAGCGATCTTATACCTTTATTAGCTTGACTTGGC
CCGGAGCTCAATAGGGACCCTCAGAGtatttttttagacttggcTGAAGA
TGTACGTCAGCACCAAGTGGTTCACGTGTTGTAGAAACGTCCCACTGCTT
TCCATCCCACCGGGGACTCTAATCTAAGCTGGTCTGGTACGATGAGTTCT
GACCCCCCCTCTAGAGCTCTAGAGCCTTGCCATGAACTTTTCAGGACGTC
GGACtactttttttggaatctacacccaaaaaaaacataaaatatcaaaa
tctggTCAAAAATTGGGACTTTCTCCCGAACCATGGATGTGGAGCATGCG
CATGgatagacaggagacccgttgtgtgtttttttataatttgatgtaca
caagacaggttcgagctgtgagtccaatttttacagtgggaagttcgaat
ttagcgctgtcctcacttactaaaataaaagccaaatttcgaaagttgca
ctttctctaagaaagtgtgaccagtaaaagaataacaaaatttgattggc
tatgttttcaactgttattaggatctgagaaattcaaactctcagcccgt
accatgctatacatttcgccatcagtttatcaaagaagaaatcatagcat
ggactCCCAGGCTAGCGCATGAAGGCCATGGAGTTCTTTTGTTGGGACTa
attgaggcctctacagccctcCATATACAGCCAGGCCTCGTTTTCATGTA
ATTATATTTCTAGCTCTATCTTAGTTTTATATGTAAGGGAAACACTCAAG
TCAAACATACAATCCCAAACAACAccccgggaaaggtgtattagaaNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAACATACAA
TCCCAAACAACAccccgggaaaggtgtattagaatGATTTTACAAGCGAG
TGCATTCCTTTATATATGAAAAAACAGCCAATGAGGTAGCCAATTGCAGA
TTATAggtgattatggaaaaaaatataaaatcatattctgcaaaaatcgg
gaaaattagtaaaaaatgacccttgaaacccttgaatttgttgaaaaaga
aaagctgGCCACCTTTATTGCATTTTTAATAAAACAGCCGTAATGACAGC
TGCAAGCAGGGGGGGTACCAAGTCAGTGTACTGtaccatagggtactaac
ttgatttttggattttttttccaaaaaactagaccaccaccctttttagt
acactgtactaacttccTTCCACGGtcgggctttgacaccaccctttcag
tacactgtacCGACTTTTCTCCATGACAGGATCTTTGATACAACTCTTTt
tgtacactgtactaactttcttCCACAGATTGGGCTTtaacaccaccctt
ttagtacactgtactgacttTTCTCCATGACCGGATTTTTGATATCACCC
TTTTAGTACATTGTActagctgttttttttttctcggtCAAATAAGTCAA
ATTGCCACCATACAGTATACAAAGGATTTAAAGCATTTTGTCAAGAAAAG
CACCAAATTATATAAagggaaagatttgaatattattaGAATATTTGAAT
CATTGTAGTACAAACACTGAACACAATGAAACAGACAAAGTCTTTCGAAT
ACAGTGAAATTAGCTGAAATTAGCACGTCAAAACACTCAAAACCAACTTT
GAGTTATTTCCCTTCCTATGACTTGATTTCTGGTTGTCTGGCAAGCTGTa
gcagtttttcatttttgaaaaagaaaaNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNga
attatgaagttctctggaatttcgattgcatttattcaggttgatttttt
atgacttctaatggtactttttctaacgagtttgattactctgttctcac
aattatgtctttttttttgcgtccttttccgtgattacttttatttatat
ttttaaagacaggtaagcaggcatattgatgtaactgatcgaatggccga
ttcctgggtaatattcgattgtgttcgattgcgtttgagtaaTGTTcaat
tgatagttgactatgttcgattgatagttgactaNTGAAGGTCTCGGACA
AATACACATGGGAATTCTCTGAGTTTGTGTGTTTTCACCACTGAAATTAG
TACAATGTACTACTTCTTATTGTGTATTGGGTGGCCACTGGTCCTGGAAA
GTCCTGGAAAGTCCTTGAAAGTCCTGGATTTTGTTTTAGTCCTGGAAAAG
CGTCCTGGAAATTCATAAAATTGATTAAAGTCCTGGAAAAGTCCTGGAAT
ATTTTTCCTTGTTAGTCCTGGAATTTAACCTTTCTCTATAGCTAAGCGAT
CAAGCGTGAAggaatttgtatttttatcaGATATTCATTGCTTTTATTTT
CTGTATTCTAATATCTGTGTTTGCAGAAGTcataaatattgtcaaaatcg
tCAAACATAATGGCATAACTCTTGGGTACCAATGGACGGGGTTTGGAATT
AAgcggttggaaaaaatctcaaaatctaatCAGGGAGGTTGAAATTAAAA
TGCCCTGctgggtggaaaactttggaAAAGCAGGCTAATACagaagaatt
agggcaaaagagggaactatcaaaaatattttcccaaaacttaattagca
gggggtgggtggaataagaatgtcatgggtggaaaatttttcaaaaaatt
aattagcgaggGGTACACTTATTAGGTACCCAAGAGTAGTTTGGCTAAAA
GCCAAAAGCATTATCGTCTAAAAACTGGTTCCTACATGAGACACTTATAA
AACACCAGCTTTATGAATACACCCATTGAAGTTTTTCAAAATATCACGTC
CTATCTTCGAAAATATTATCTAGTTGCGTTTCAAAGAGATAATCCTATgt
ttctgtttctaaaaaagtgatattTTCCAATTGTTGATGAAAACGATGAT
GCACCACTAAAATTGTTTAAGTTGGGTTTTTGGGGGGAGAAAGGGGAAAG
GGGTgccaaaacttttttgttaaatCTTATTAAAAGTTGGACTTTGTGCG
TCTTAAACTGCGCCCTGAAATCAATTTTGGTGAAAtaagttttcaaatct
ttcatgctcgctttgctcgcaataagattttggtaatttttttgaaatct
agttttgcaattttttttgacaatctAGCAGTTTCGAATGGTAATCTTAA
TGTGCGCCCCATGACCAATTAGCTGAATGCAATTTAAAACATATAACCCA
ATTTTTTTCACTCGAAAAGTAATTCGAANGTAATCTAACTGTGCGCCCCA
TGACCAATTAGCTGAATGCAATTTAAAACATATAacccaatttttttcgc
tcgaaaAGTAATTCGAAATCCGTAGTGGttactttaaaaacaaaaataca
agaGTAATGTACGGTTAACTCTCACTTTACAAAATCTTTGTCGCCTCAAA
ATATCCTCAACAAGTAAGACAATTTGTAAGATTCTTTTTAAAGCTATGTG
ATTGTCTATGCAAATCTTCTattggcccagctagctttagtgtagtgggc
ctttcattagcattctgcccggtgtcagtgtgtaacaatttactaggcga
tacgcgttttATTTCAAGCACCGGCTAGTACATattgtgaaaaatttgat
tggctgaaaCATGTCTCTTTTAGAACATGATTGGCAGAATAAAAACAATT
GCAATCGTCTTTATTGgtttaaaacataaaaggagaaaatacaattaact
aCTAAAACTATAGAATATAAcagatgtacacgtttttttttattagaaca
cctaaaatttggctgagcctggatgtgcttatttttttagcaattttcag
tcTAAAATGTTCTNtattagaacacctaaaatttggctgagcctggatgt
gcttattttttagcctaaaatgttcttaaatgcgttcctAATTTTTCGGA
CTACTTTAAATCGACaacatcatgcaaaataaagagctcttaaagttggt
aaaatttggacaatatttgactctcgattttagaaaatccatccctaagt
ttggttaaaactgcttgaaaagaggaaagaattgtagtttcttgtcattt
ttttccaaactgaggctgggctgatgttcttacgatgttcgtAATTTTTC
Gatgaatttcagcctaaatgttcttataaactgggttctaataaagaaaa
cgtgtagtacgttttattaaatattttgatttatttctcaTTGTTGCTAA
TAAGAGATAGGCGAGTGGTTTAAGGCATCTTTGGCTTGTACTAGCGACTT
TAGGTTCAAATCCTCTCTGTTACTtaagtcttgttcagttcatattttta
tttgctgggccttcatgccctctgggcttctttTCTTCTTGGTTAAAATC
AAATTGGCCCATTCTCTATTTCGTTGCTTTGGAGCAAGTTAGAAAAAGCT
TTGCACCTCATTTTTGCGTTAATATTTTTCACATACATAGCTCAGTTCCA
GGAgaaaatgcttttcttttagGATAAAAAGtcctggaaaattttaaaaa
catcctGGAAAAGTCCTTGAAAAGTCCTGGAATTTGACTTGATTTTTTGA
GTGGCCACCCtgataagtagaaaaaaagcccaATTTTTGCCATCGCAAAT
tcaaccgctaaaaatcgcgaatttttcaaccaaaaatacattcaaatata
gcgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGTGGTG
GAAGGCACAAAAAATTATCTTCCTTTCTCAGAAAAAAGCTATCATTTTGT
TTCAGCTGaaggtaacctgataacagctgttcgtaattttcttaggtgca
cggtaaacctctgaaggcacttgaaaattatacacatctgaggaaaatag
tcctcccgcggaaaatttcacaacaagaatcttgttgtgcgccagaaagt
caaaaactgatacggcgccctattcacaaacacaatcacgcaactttgtt
gtcatccccagtccttatAGACGatcgcggtccttacgattttgagattg
cattttcatcagatcgtatgttttcacccagtgggttcgactgacaattc
ctgcattaaAAGCCAAGATGCAATATGTTTATTAAATACACGCTCACAGT
ATCTCTAGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTCTGACCTCATGA
ATGTAAGAACCAAGaattaaagactttgttttggggTCACTCGGTAAACA
AATCTCATATAACTTGTTCCAGAGACATTCATTGTCCATATAAGACTGTA
AGAGTTtgtatttcaaagcaaaaatatttctcgtactgcctatttttctc
atcaattcttcaacttgaaccagtttcacatctcaatagaatgttaatac
cattttgccaatcatttaatgtccaaaGTTATGGGGATGTAGCGTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNatacatcaatgttcttagtcaaattactcaattcttttatgagatag
atgtttttttttgctcacgagggcttacttttgaagaatgtgtgtgttta
gaaatgaaattttggctacttggcgtgtttttggccaaataagatatttt
tttatcagcacattatcaattacttctAGGTATTACCTTTTCTCGAGGTT
Ggcgctttcattctttatgatttttttcacaaagatgcataactataaac
cctcgaatgtgacggagcccgattttcaaaaatacatatttttgggcaaa
tttgggctcaaaaatgcatgtttatctataagaatcacaaacgcacgttc
cgcaaaaattgataattatgaaaacaacagcacaatgacttcattttttt
cattctttgattggatgtgacgaaattatgtaaatttatgcaaattttgg
ttaccccaaatttaaggtaactctcggacgagaatttcatacacgatacg
catttCTTCTGAAGGATATCTCAAAGTAAAAACATGGTCAAGTAATCAGA
TTCAAATTACTAAGTGACCATTTTTAGACTTACAGACGAATTCTTCTTAA
AATGATTCTAAAAAGGTCAGAGTgacatttttcaagctttcatCAAGATT
TCCTTCAACATAAAATCTTTAAGAAATACGACGGTGATAGCTTCTGATAA
CGTAACAGCTCAAGAGAAGCGACTGCTTGAAAAGGCTTCAACCCGTTGAC
TCTTTCAGGGCATCTAAAttggaagaagaaaatgaaacgaCGGTGAAGAA
ACGTAAAGAAGAAGAATGTGCTGGAGGGAATCCAAGTGAAGAGCAAGAGA
CGAAGGAAGTAGAAGCAACAAATCAAGAAGCTGAAAATATAGATCAAGGG
TAATTCTCACTCTCATTTAAAGCAACGTTGAAGAAGTGTcaccatttttt
tcttttgaatttttataaaacttaAGTTTCATCATAAGTACATCCAAATT
GACTGAAAAAATCGATTCTCCTGCAAACTTCTAGAATTTTAAAGACAGCC
CTGCAGCTTAAAGACagccctgtgtcacagaccctgtGGGACCCccgccc
cactgaaaaatttggccaaaattctgttcccggtgggaaaattACCCCAT
AATTTCAGCTCCATTGGGAATTTGACTTAGTTTTTGTTTAGAATAGGAAA
AgaaatgcactccaaaaccatccccactgagaaGTTCTTACTTAGTTTTA
CTTTTGAAGATCACTTCCACTTTGCAAACCAAGTCAAGATTGGCATGAAT
CGATTACTGAAACACAAAGAAGAGAACACATTGATGAACTGTAAGTATTT
TTGTTAAGGCTTTGCGATTTCCCAGGTGAGACCAGCTTGATTAGTTGTTT
ACGATCTCGACCGATCCTCACACTTGAAAAGAAGGTTGAAGAAGAATGTT
GTCaatattcttataatttcaTTGTTCAACTGCCagtttgtttcaatttg
aaaatctttgttaatttaattttttgcatgGTATTCATTTTCATTACATT
CCATCTACTTATTTATTTCAGTATTTGCTGCCATTGTACCACAAGGAGTC
GACGAGCCAAgtacaacaaaaaacaaacaaatggaAAATCTAGTTTTATA
CGCCCAAAAAGTTGAAGAAGATATGTATACTTCTGCTACCAGTAAAGAAG
AATATGAATCTTTGTTAAACGAGAAAGTGagcaaaataaaaacagaacTC
GAAGAAAAACGATTGGACCGCGAGAAGAAATCCAAAACACGAAATCAAAA
CGAGGCTAGTGCAGGATGACTATTATattcacacccctgtctcacacgGT
CTTAATTTTTGTTGTcggtaattatattttaatgggataaactttcgcgg
ggattaaacttcgcggatttcgcggatttgggtgtcatccgcgaaaatcc
gcgaaattaagtcccattggaaatttggaagggcctcatccgcgaaatat
ttctgaacaaaactcaaaatatgtcaaataaatactatctgaatggttac
ttgcatcagaaaggcgcaaataatgtgtatttcaacaaccaatatgcatg
atttgacagtagaagtcacaaaatcgtgaaaatattgccacccaatagtg
ccacacGCGAAATTAagcccgcgaaatttttgaatttcgcagataggctc
aaccgcgaaatttaatccccgcgaaagtttatcccattaaagtagtcaTT
GTTTGTTGCAGAGGTATTGTCACCATATTACACAAACACAtttattttct
ctaaaattaatTGCTCATACGATGTTGGTCTCGATATAATTCATACAGTA
ATTTATTATTCGATCACTCAAATCGCTGCATCCCCGTATAACAAAACTAC
TTAAGCAATCATCATGGTgagaaaaaatatctaaaatctaTTCTTAATGC
CTGACAGCTCTTCATTCGTTAGCTTTTCGAGTTTTTTTCCCAAGTGGGGA
GGGGATCCTAAAGGTTAGGATACGAGGGTGTTCTGTAGAAGCAATAATAC
TTGGGTCTAAAGATATCACTAAGGAACCATACTTAAGTGTCCAATTACTT
ACCGAAAATTGTCGTTAACTGTAAAAttgaaggaattttttttttaatat
gtaGCATAGACACTGAATAAATctgtaattttttgtttaaataatctatt
tcatatttttttgcgaTTTATATCAAACCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031231XLOC_031231Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049152-exon-scaffold_153-1491911889:140643..140672TCONS_00049152-exon-scaffold_153-1491911889:140643..140672Clytia hemisphaericaexon
TCONS_00049152-exon-scaffold_153-1510915933:140643..140672TCONS_00049152-exon-scaffold_153-1510915933:140643..140672Clytia hemisphaericaexon
TCONS_00049152-exon-scaffold_153-1575043694:140643..140672TCONS_00049152-exon-scaffold_153-1575043694:140643..140672Clytia hemisphaericaexon
TCONS_00049152-exon-scaffold_153-1491911889:143433..143501TCONS_00049152-exon-scaffold_153-1491911889:143433..143501Clytia hemisphaericaexon
TCONS_00049152-exon-scaffold_153-1510915933:143433..143501TCONS_00049152-exon-scaffold_153-1510915933:143433..143501Clytia hemisphaericaexon
TCONS_00049152-exon-scaffold_153-1575043694:143433..143501TCONS_00049152-exon-scaffold_153-1575043694:143433..143501Clytia hemisphaericaexon
TCONS_00049152-exon-scaffold_153-1491911889:145017..145116TCONS_00049152-exon-scaffold_153-1491911889:145017..145116Clytia hemisphaericaexon
TCONS_00049152-exon-scaffold_153-1510915933:145017..145116TCONS_00049152-exon-scaffold_153-1510915933:145017..145116Clytia hemisphaericaexon
TCONS_00049152-exon-scaffold_153-1575043694:145017..145116TCONS_00049152-exon-scaffold_153-1575043694:145017..145116Clytia hemisphaericaexon
TCONS_00049152-exon-scaffold_153-1491911889:163951..164091TCONS_00049152-exon-scaffold_153-1491911889:163951..164091Clytia hemisphaericaexon
TCONS_00049152-exon-scaffold_153-1510915933:163951..164091TCONS_00049152-exon-scaffold_153-1510915933:163951..164091Clytia hemisphaericaexon
TCONS_00049152-exon-scaffold_153-1575043694:163951..164091TCONS_00049152-exon-scaffold_153-1575043694:163951..164091Clytia hemisphaericaexon
TCONS_00049152-exon-scaffold_153-1491911889:164452..164532TCONS_00049152-exon-scaffold_153-1491911889:164452..164532Clytia hemisphaericaexon
TCONS_00049152-exon-scaffold_153-1510915933:164452..164532TCONS_00049152-exon-scaffold_153-1510915933:164452..164532Clytia hemisphaericaexon
TCONS_00049152-exon-scaffold_153-1575043694:164452..164532TCONS_00049152-exon-scaffold_153-1575043694:164452..164532Clytia hemisphaericaexon
TCONS_00049152-exon-scaffold_153-1491911889:164764..165923TCONS_00049152-exon-scaffold_153-1491911889:164764..165923Clytia hemisphaericaexon
TCONS_00049152-exon-scaffold_153-1510915933:164764..165923TCONS_00049152-exon-scaffold_153-1510915933:164764..165923Clytia hemisphaericaexon
TCONS_00049152-exon-scaffold_153-1575043694:164764..165923TCONS_00049152-exon-scaffold_153-1575043694:164764..165923Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_153supercontigscaffold_153:140643..165923 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.0296395	0	0	0	0	0	0	0	0	0	0	0	0.106575	0	0	0	0	0	0	0.39423	0	0	0	0	0.695583	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049152 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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