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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049129 ID=TCONS_00049129|Name=TCONS_00049129|organism=Clytia hemisphaerica|type=transcript|length=1038bp
TGTAAACCTCTGAAAATGGCGACCTTTGTAGCGagccgtttgttttgatt
ttagcgaaaatgaaagcttcggtaaaattttggtcaaatcatCAAGACCG
TTAAGGTGGTGGGTAGGTATGTTTTGAAAGTAatggtcttttcccgttac
gcgtggcgactttgaatatggacgtTGCCccttaggtctacactgtcctT
ATTTCCCAGACCAAAATAAGAAACTTGGCAAACTGCCTCAAAGTCCAAAG
AAGTATTAAAAAAACACCTAGACACCTTCCTCATAAGTGTTCTGGACGAA
CCACTTCTTGCACGACCCTGCCCACGCAACGGATTTAACGAACacccgga
cacgcgaaagtccggtgtaaaatgagaattttttttaccacccgaaatct
ctacaccggacttaaggaagtcggatgtccggtgtcggagaaggatattt
ttttccaccggacaatcaaaacaccggacatgaccagtccggtgcgtcca
gtgtttcttaattttttgtttcgtaaATGTCCGGCATCCAAAATttcctg
tatgcaacaccggacttgacaccggacttattgcatccggtgtagcgaaa
ggatactttttgccaccggacaaatacaccggacagtccggtgcgtcggc
agggtcctcttcTTGCCCACTTTTTCACTCTCAGTCAAGCTGACTCCAAC
TGTCCAACAGCTTCAACGTTCAAGGAAATGTAATCCATATGGTATCGGAC
TCAACAGACTGCTGACAGACTCAACGTCGACGACAAACGAGTTGGATGAG
CTGTGTTCAAGCAGAAGCCACAAATAGGTAGATACAAGCCCTAAAGCTGT
GGTTATAGATACATTAAATCACAAAAGTAGAGTAAAAGAAGGCAGTATAA
AAAAAGCTACTCAGAGACAATCCAACGATTTTAGCCAGTCTTCTCTTGAG
TCTTCCGTTCGGTCTTCTCTCAAATTCTGGTAATTTTATCTAATAGCTAA
CACTGACTAACTTTGTAATTAACAGACTTATAAGCAGC Run BLAST on NCBI transcript from alignment at scaffold_152:3692..4729 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049129 ID=TCONS_00049129|Name=TCONS_00049129|organism=Clytia hemisphaerica|type=transcript|length=1038bp|location=Sequence derived from alignment at scaffold_152:3692..4729 (Clytia hemisphaerica)
GCTGCTTATAAGTCTGTTAATTACAAAGTTAGTCAGTGTTAGCTATTAGA
TAAAATTACCAGAATTTGAGAGAAGACCGAACGGAAGACTCAAGAGAAGA
CTGGCTAAAATCGTTGGATTGTCTCTGAGTAGCTTTTTTTATACTGCCTT
CTTTTACTCTACTTTTGTGATTTAATGTATCTATAACCACAGCTTTAGGG
CTTGTATCTACCTATTTGTGGCTTCTGCTTGAACACAGCTCATCCAACTC
GTTTGTCGTCGACGTTGAGTCTGTCAGCAGTCTGTTGAGTCCGATACCAT
ATGGATTACATTTCCTTGAACGTTGAAGCTGTTGGACAGTTGGAGTCAGC
TTGACTGAGAGTGAAAAAGTGGGCAAgaagaggaccctgccgacgcaccg
gactgtccggtgtatttgtccggtggcaaaaagtatcctttcgctacacc
ggatgcaataagtccggtgtcaagtccggtgttgcatacaggaaATTTTG
GATGCCGGACATttacgaaacaaaaaattaagaaacactggacgcaccgg
actggtcatgtccggtgttttgattgtccggtggaaaaaaatatccttct
ccgacaccggacatccgacttccttaagtccggtgtagagatttcgggtg
gtaaaaaaaattctcattttacaccggactttcgcgtgtccgggtGTTCG
TTAAATCCGTTGCGTGGGCAGGGTCGTGCAAGAAGTGGTTCGTCCAGAAC
ACTTATGAGGAAGGTGTCTAGGTGTTTTTTTAATACTTCTTTGGACTTTG
AGGCAGTTTGCCAAGTTTCTTATTTTGGTCTGGGAAATAaggacagtgta
gacctaaggGGCAacgtccatattcaaagtcgccacgcgtaacgggaaaa
gaccatTACTTTCAAAACATACCTACCCACCACCTTAACGGTCTTGatga
tttgaccaaaattttaccgaagctttcattttcgctaaaatcaaaacaaa
cggctCGCTACAAAGGTCGCCATTTTCAGAGGTTTACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049129-exon-scaffold_152-1491911889:3692..4729 | TCONS_00049129-exon-scaffold_152-1491911889:3692..4729 | Clytia hemisphaerica | exon |
| TCONS_00049129-exon-scaffold_152-1510915933:3692..4729 | TCONS_00049129-exon-scaffold_152-1510915933:3692..4729 | Clytia hemisphaerica | exon |
| TCONS_00049129-exon-scaffold_152-1575043694:3692..4729 | TCONS_00049129-exon-scaffold_152-1575043694:3692..4729 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_152 | supercontig | scaffold_152:3692..4729 . |
Blast
The following BLAST results are available for this feature:
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