TCONS_00049118 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049118
Unique NameTCONS_00049118
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3180

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049118 ID=TCONS_00049118|Name=TCONS_00049118|organism=Clytia hemisphaerica|type=transcript|length=3180bp
gttggcttgaaacatttgtcctttgacttattagtcttttagcaggctaa
aaagtgccataaaagttacattttattcaaagtttgaagttttacagatt
ttctattttgtcaagaatttttcgcgagcataaactttggcgaatggccc
ttcctagaatttttaaagacgtgtatttactttcgcgaaaagggccaaaa
ttcgcgaaaatcgcgaaagtttcagctcgcgaaagtttctacgcctgACT
ATTATGACTTTCAAGCTCCAGCcaccaaccctaaccctaactgataataa
ccgagcCCCAGCCTaggtccgcagattgaaaaTCCTGGTAGGTGATATCG
TCTGGTGGATGATATTGATTGATTATAGATGGTTATGACTaatatgtttc
tttttttttttttggcaataATATTCGTGGAAACAGTTGGCAAGATACCT
ATGGATTCATTAAGGGGATATTATATTTCTAATCAATTCAAATAAATATG
ACATAGGTATACCTGTTTTGCAGTCCAGTCAGCCTTCTTTTAGTCCCAAC
TTTGATATTTCTTTCCTGCTCGTGTGGATGGAACCTTTTGCAATTACGGG
CTTCATTGCTGGGGGTCTTTTAGCCAGCTTCCAACAATTTCTGCTTTTCG
TTTAGATTTCACTTTGTGATATTTTAAATCAAGCATCTACTGGCTAATAA
TACAAGCGccgttttccaatttttcatttgcgaaaaaagtttcGCTGGCT
CCACGTACAAAAGAATGTCTGAGCAAAGAGACCATAAGAATAAACAGTAA
GTGTGCCCACAACCATCGACAAGGGCAAGAAAGTTGAAGAAAATGGCGGA
CGCTCTCACAGATGCACTTCAGTCTCTCGAAGGCGATTCTCTTTTGACAA
AAGCCAGTCCGGAGAACAATTTTATCGACGAAGGGAAGTCAGAAGATAAT
TCTCAGTATGCAGTTGATGACTCTCAGAAAGGAGGGTTTGATTTTGAAGT
GAACCTTCAACCAGAAAAAATTGTAGAAGTTGCCAATTTACCGGATGGCA
GTCGTTCATATCGCATGAAATGGAAAGATACTTGGATACACGAAGGATTA
ATGCCTGCTTACCAAAACCTGGTGGATCAGTTTTGGACGGAACAAAAGCA
TGCAAATAAAGAAAAGCAGGTTGATGAAAGTCCAGAAGAGCTTGACTTCA
CCATTAAAGCCCTGGATACACCACCAGAAGAAGACAAAACAAAAGAGGAT
AAACAGGACAACCAACAAGCCAAACTGGAAGCAGAAAAGCAAAGCTTGGT
GGATAATATTGAAAACAGCATCAACATGATTTTGCTGCCTGACACCCACA
AAGATGAAGAAAAACCTGAGGAAGTGAAAAATCATGAAGAAATGGAATCC
AAAATAGAATCCAAAATTGaagaGAAAATTGGACGGAAACGCAAAATTCA
GAAAGTCGCCAGGTCCAAGAAAGAAccaaagaaagtgaaagtaaaagtaa
aagacACCAAGAAGGTTGGAGAAGGAGacgaaaaagaaaacgaaaacaaa
CCTGATGCTGACGATTTTGACGACTTGGTCGATAAAAATGTCGATCACTT
AACACCCCCTGATACTGATATCACATCCATGGAAGCGCAactactgaaaa
ataaaaacaacaactaGGAAATTTGCAAAATAACTAAAAATTTTGGCAGA
TGAGTTGTTTTGTAACTTTAGAAGCTTAGGCACAAAAAGCTTGATATCGA
GTCGAGACCACCCTCAACTTAACAACAAAACTGCTCTGCTGGTTGCTACC
TCACTCACACACACTCTAATCTGCCCAATTATAAAGACAAATGGTGGTAC
AATGAGAATCCCTTTGATGGCCGAACCTCAGCATTGTGAACGAGGTAGTA
TCACAGACGAAGAAGATGACCAGGCCGAATCAGCGGAGAACGAGCAACAT
GCTGTTCGGAAAACACCTCCGAAGTCAACAGTCAATAAACGGGTTCGCGT
CCCTGAACAATACTATTGCTTATCAATGGATGAATTACGAACGTATGAAG
GTTTTCTACGAAAGCTTTTGTGTTCTTCTTTAAAGCGTGTTGGTGTTTGT
GTTCTTAAAGACTTTCTACCTTCATCATTGGCAGAGTTAGTTCACAAAGA
AACTGAAAATCTATTCTCTGATAGCTGTGGCAATGGTGATTCAACCAAAA
CTCAAAAATCGAACCCTAATTTTCGAAGCGACGAAGTAGCTTGGGTTGGA
AGTAAAGACACTAAAAATACGGCTCTTAATAAACTGAACTGTACTCTTCA
GAACCTTGTAGTGTCTATGGCAGGTTTACCAGAGTTGCAACAACATCGTT
TTAAGATCACTCATAAATCGCATATCCAGGTCTCCAAGTTTCCGAAAGGT
TGTGCAGTCGGTTATAAACCTCATATTGAGAATCCAAACAATAACGGACG
ATTGTTATCTGTTGTTTATTACACCAATAAAAATTAttcgaaaattgaag
atgaagGTCTGGTTCGATTTTACCTGAAAAACAATACTCGTTTTATTGAG
GTAGAACCATCTTTCAATACTGCAGTTATACATTGGTCTGACCAAAGAGT
CATCAAAGAAGTTTTATCTTCCAACACTAGAGATATGTACCATATAACGA
GTTGGTTTTTTGGTTCGTGTACTTTGAAGTAACATACATTATCCGTTTTT
GTTTGATTCAATATCATTTGAGTGCTTGGTGAATGGAATCAATTCCGGCA
TTCTCTCAGAGTAAGGAAAACCTCAAATATTTTCCACTGTGACAAACCTA
TGGAATGGGTGGTATTGGATAAATAGAGAGCacttttttgctgaaatttt
gcagatttcagGGTTGTGATAATGTAATATAAAGCATTTCGAGCAAGAAA
TCTATAACTACCTTTCATGTCATTTGAGTAGTAACCTTAAAACAGACCTG
GTGGTGCCTCCTTAGTCAGTATATCACTTTCAAAGTGAAGCCGCGGTCCC
TGGGTATTCTATATATTGGATGTAGCCaccaatttcttttgaaaatttta
taacGTTATATATAGGTAGGTTGTAAATACTGTCGATATATTTGAAAAAg
gattttataaatattttatgCTCGCTATCTAAATAATTAAACTAAAAGAC
AAAGTTTGATTCGAACTGATTTCACTAACA
Run BLAST on NCBI

protein sequence of TCONS_00049118-protein

>TCONS_00049118-protein ID=TCONS_00049118-protein|Name=TCONS_00049118-protein|organism=Clytia hemisphaerica|type=polypeptide|length=276bp
MRIPLMAEPQHCERGSITDEEDDQAESAENEQHAVRKTPPKSTVNKRVRV
PEQYYCLSMDELRTYEGFLRKLLCSSLKRVGVCVLKDFLPSSLAELVHKE
TENLFSDSCGNGDSTKTQKSNPNFRSDEVAWVGSKDTKNTALNKLNCTLQ
NLVVSMAGLPELQQHRFKITHKSHIQVSKFPKGCAVGYKPHIENPNNNGR
LLSVVYYTNKNYSKIEDEGLVRFYLKNNTRFIEVEPSFNTAVIHWSDQRV
IKEVLSSNTRDMYHITSWFFGSCTLK
Run BLAST on NCBI

transcript from alignment at scaffold_152:108727..131176+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049118 ID=TCONS_00049118|Name=TCONS_00049118|organism=Clytia hemisphaerica|type=transcript|length=22450bp|location=Sequence derived from alignment at scaffold_152:108727..131176+ (Clytia hemisphaerica)
gttggcttgaaacatttgtcctttgacttattagtcttttagcaggctaa
aaagtgccataaaagttacattttattcaaagtttgaagttttacagatt
ttctattttgtcaagaatttttcgcgagcataaactttggcgaatggccc
ttcctagaatttttaaagacgtgtatttactttcgcgaaaagggccaaaa
ttcgcgaaaatcgcgaaagtttcagctcgcgaaagtttctacgcctgACT
ATTATGACTTTCAAGCTCCAGCcaccaaccctaaccctaactgataataa
ccgagcCCCAGCCTaggtccgcagattgaaaaTCCTGGTAGGTGATATCG
TCTGGTGGATGATATTGATTGATTATAGATGGTTATGACTaatatgtttc
tttttttttttttggcaataATATTCGTGGAAACAGTTGGCAAGATACCT
ATGGATTCATTAAGGGGATATTATATTTCTAATCAATTCAAATAAATATG
ACATAGGTATACCTGTTTTGCAGTCCAGTCAGCCTTCTTTTAGTCCCAAC
TTTGATATTTCTTTCCTGCTCGTGTGGATGGAACCTTTTGCAATTACGGG
CTTCATTGCTGGGGGTCTTTTAGCCAGCTTCCAACAATTTCTGCTTTTCG
TTTAGATTTCACTTTGTGATATTTTAAATCAAGCATCTACTGGCTAATAA
TACAAGCGccgttttccaatttttcatttgcgaaaaaagtttcGCTGGCT
CCACGTACAAAAGAATGTCTGAGCAAAGAGACCATAAGAATAAACAGTAA
GTGTGCCCACAACCATCGACAAGGGCAAGAAAGTTGAAGAAAATGGCGGA
CGCTCTCACAGATGCACTTCAGTCTCTCGAAGGCGATTCTCTTTTGACAA
AAGCCAGTCCGGAGAACAATTTTATCGACGAAGGGAAGTCAGAAGATAAT
TCTCAGTATGCAGTTGATGACTCTCAGAAAGGAGGGTTTGATTTTGAAGT
GAACCTTCAACCAGAAAAAATTGTAGAAGTTGCCAATTTACCGgtaaaaa
attttaagttcaTTCTTTTATCCATTTTATGCTATGTTAAACTTACTGCT
TTCACTAAAATACAAATAACATGGGATGATAATTTCAGTTTTTAACATTA
TAATTGTTATCTTACTCccatgaaatgaaaatgaatagACACTTTCTGTT
GCGTGCGTGTTGAGAAATCACACTCACACAGGCTAGCAGCTCCAGAagag
ttttcaagttttaatttttttttcaaaatctaacctatcttgtagagctt
tgaaaaagaaagaaaatgaggggtcataggcctccagaggattagtggtt
gtaaagatattcaaattttagtgtcaaaaatttgNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNaaaaatgtcaaaaaaaaggttaggaaaatagcttggaaaa
attcgaaaaatgtgtcaaaaaagaaaaaaaagaaattttcaagtcaagct
tcttaaattttgcataactttttttctagtgtagctagagacctcaaatt
tggagggagaattctttgatggtgttaaaatattattatataaaaatatt
tgttaagagccagtttttttaagagcggggcaggtccaatagtttgaaac
ttagatttttttcatttttggatatgttgttaagtacaatgaactgagta
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATC
TACCATTTAAggatcaagtctgtcaaaatgtgcttctaaactctcaaatc
ttcaaaggtgaactttaccaaccccataaaacaattttgccaTCAGCCTA
TTTGCTCTTAAATACTTAGAGATAAGtccaaaagtacaaaatattccTAA
ACCTTTCCTTCTCTTTGGATAATTTGAACTTTGGGCTCATTAACTGCATT
TAAGAGCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNtcagttcattgtacttaacaacatatccaaaaat
gaaaaaaatctaagtttcaaactattggaactgccccaaactgccccatt
cttaaaaaaactggctcttaagtATTTAGtgtatttatcaaaataacgaa
agatatatctttttttgaaaaaagaagacattgcattgttttatttgttt
cattttcaaggggcctctggaaatggaggaacaaaaacttatgagtaaag
aataagtttttctgaaaggagaagccccaaatgaaaagaaaatccatttc
ggcagaattaaaacctttttttgggacattcccatgctaaagaagcaaaa
aagttaaaaaaactacatgaaaatgaaagaactagaattggCGATTGTgg
tttttgaattcctcaccctttttctgataaacatacaaagtttcagcctc
caaatacattttcctccgtttccagacacatttgttcttcgatagttgca
aattttttttctcccgtcggcaaacaattttctaaatgttgcaaaacgtt
cggcaatCCAATTTCCAAttccaatttgccgtctagcccgtgtccacagt
gttatataccgctggaaagctaagatcaccggctttcatttagtaaaaac
tggaacgctttagcatacatagaaaaaaagtttgagggttcaaagttcac
ggaaaaatgaaacatttggtttgacgtcaaccaAAGTTGCATGccttctg
gagtcgctacacAGGCACAGGGGGCAGGCTCCTCCAGGGAGTGGCTTTTG
TCAGAAATGACTGATTCCTACAGTATTGTCAACAGTATTGTTAGTTCCAT
GACCCTGATTTTTCGAGATGAGAATAATACCTAGATACTATGGTCTAACG
TTAACATTCTCTGTCTAATAGAGCTTTTCGCCATTGATGTCATTTTTATG
CACAAGCAGCCATGCCATTTTCCATATAGCAGCTACTTTAGATTGCCGAA
ACAGATTtgcatattttaaattttttttcaaatcaagaTTTGCATAGTTT
TGCATATAAATGACAGTTAGTGGAAATACCTCCATTtaaagcatgttcaa
agttcacaattttagcgactttcgttttattacggaaaccaaacaagtga
gaacaagtcattaaaactaaaagtcagcacTCCGTGGTTATGACGTAGGT
TTTGTAATCGATTTTCAAAGTTTCTTAAATCTAACTTCcacgtcattttt
taaacctctTAGTAGGAGAATGTGTCAttctataaggaattttataacac
ttcatggcgGTTTAAAACAGACAATTAGACATTTTTgcatttatggggaa
gaatgtaattttcagaagatgctttattcgTTTCTGTAAAATTGTGATTC
CCCATGGTTGTGAAATGGTGGCTATGagttcctttgttcttttgctattt
gcTTTTGTTCTGTGTCACGTAAAGACGCTTTGCAAATCaaagtacttcca
ctaactgaatgacatcattttcaaaatggtttatcttttttaaatctatg
aTTTCTATGAAAAATAGCTTGTATATATTATAAATGAtatcaaaggcaaa
aaggtctattgggcagttccagaaaaaaCCCTTACCCCCTGTGGACAACa
ctctgtttgaaatttttttcacttggaaatcctgagaaattttgaaaaag
gttccagaaaattcaggattttccTATTTGTTCATTCGTATCAGATGCAA
ATGCAGACAGATTTTTAGCCCCAAGTGCAGAGTTCAACTATTTTTTCCTC
AAGTGcagctaattttagcaatttttgcttttttgggccaatttgcgagg
tataggtgcaccttgtaaggaccaaaatttatcaggtgcgCTCTTCAAGT
GGGGAACttggtatttccaaatttttcctcAAGTGCAGCCTTGTCATACT
CTGGAAACTGATCtgtcacccttctttagaggaacaaaatatcttttttg
tAGCCAGGCTAGAAATGATGCACAGTATATATTTTACAGGAGGCAGTAAT
TACTTTTGGTGTATTGGCACAAGGAACAAATATAAAGTAAGACATTGgca
taaataaaaatttttcaaaatgagagGAATACCGCCATTTCAACAAACGA
TTTCATGACTCCAGGTTTATCGCATCCACCTTAGAAGCACCTGCAATACA
AGCTATTTTTTAgtctttttaatcataaaaactgaaaatatagcACATTC
TGAGCAATTTTTAGGCGTCAGAAGTTAAAATATCCCAGGGCTTTCTTTGC
CCCCTTGACCCGTTTGCTTACTCTTAAGTTCCAAATAAccgccccccccc
gcttgttaattttttgaaaattttccaacccccggaccttattagggccc
cccgtttatcaatttggaagaatattttcagctgtcaaagagagggcccc
ttattttgctctaaatagcctgattttaccctatatttacttatttttag
gttttcagaagtacaattacTTTACTAAAATGTGAAAGACCGGGTGGAAA
TGACTGGGAAACAATCTAGACATAAAGAGGAACGTTTGCTTAACGACcaa
gaaaagaagagaaacaATAAATGACTAGGAAACAAAGGGAAATGGGTGAT
TTGcgcgaaattgttctgaaatgaaaaatgacacaATTTTCTAAATATAT
TGAGTTAACTGTGAGATAAGTAaacctttttggcccaaaaatagTGTAAT
GGGGTTGTTTTGCTGGAACAAGCAAAAAGAATTCCAGGTGATTATCTTAA
ATgggaatttttttggatttgccCGTGTCCATTTTCACTTAAATCGACAA
CTGTTAAAATAATGATAGAAGAAAATGTATTTTTATCCATCATATCAAGG
ACATGGTATAGTAGTAAATACCCAAAATCTTCAATTCTGACTTTGTgaca
attaaaaataaattgtaCTTACACCATATTTTGTCACCGTTGTAGTTCCT
TCAGTGAAAGCTTCCACTGAGGCTTTTGCTGCCCCTTTCTTGTTTACCAC
AAGATTGGTTTTATGTTTGGAACAAACTTTGCACCAAACTTTAGTGACAA
GCTGCTTTCCATTTTCTTCAGACGTAGAGTGCCCGATCACCTCACTTTTC
CCCCATGATAAAAATGTTGCCAAACTAACTACTCTTTTCTTACTCATGTT
TTGTCAGATGTGAAGCCACTCATGCACAAATTAAGACTGAATTTTATCTT
TATCAGCCACGACTTACAGTATTTCATGTCCGAATTTACTTTCTAATTAA
TGAGTGAAATGAAACCTAAAAATTTTAGGAAGCAAAccaaggctcgaaat
aacaatttcaagtaggtcggacaaaatgtccgatcagggttgctttagct
tgaaaattatgatttttgggtcggacatgaagctatttgggtcggacaat
gttccatgtccgaccgttatttcgagccctggcAAACCAATGAAAAACCT
GCATAAAGGATAATTGAGCTAGTAAAACATTTCTGTAAACAATGTAATTC
AACAAGATAATAGAATCATTGAATCAAGAAACTCTCTCTTAAAACAGAAA
TCTGGCTATTATGAAATGAAGAGACTCCAACTTTGACGTCTATGAATAAG
AGCATGAATCTGGTAATGTGGCCCACTTCTCGATTTATTAATTTTCCTAC
TTTGAGGCTTTGTTGAAATCTCTATAGGTATATAGTCATATCAAATCTTA
TTGTTTCTGGTCAATCTTGATATGGGCAAGCTTAAACAGTAATTTTTTCT
GATATAACAGGTACTCAAATTTTCCTATAGGGGGCTTTCTTTCCGGtaag
tgtaaaccgcaggttacaggttgcaggttacaggtcacaggtcacaggtt
acaggttaacaaaacatagaccggaaaactgtaacgcactcgtaacatac
aattcttgttatcatacccaaggtgatgcaggagataaaatgagatatga
catagtAATATTCGAATATCTTTTATTATTTGTATATAAcatataccgtg
aaaagcacagctcaaaatcatatatttacgctgtgccgacgaatcgagat
tctattcatcgcgcaatcagcgaagacaaaagtaaccatgacgNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagac
attaatatggtaatatttgctcttcatctttgattttttctacagtgatt
agattgacacatgcgcgataaaatttctattatttgtcttcaaaggttac
tattttctttgaaaacttaacctctgatactcagggtatataacatacgt
aacatgcgtataacattgaaaaaataatttttttacatgtgtgatataga
tgtaatatataatacaggtccgtgttatacacggcataaaacgcgaAATC
ACATGGTCAGCACgtgggtagatttttagctttaaaatagttctagatca
atacaatacctttgaaattatatttttgacattaacaactgtttttcaaa
cattttctttgtgttttacagtaattaaagctgaccaacactgacctgtg
acctgtaacctgtgacctgtgacctgtgacctgtaacctgcaacctgcgg
tttacacttaccgctttctttcaaaatgtgaacggaaaataaggtttaaa
aaaaatcaacatcatTGTATAATAATTCATCAACAACATGCTTTTTCAGC
TTGGTTTTTGTTGTTCTCACAGCCAGaggatatgaaaaatgaaaaacaca
gtAAGAAccagcaaaaaaagtttttttgacatataaaatgaaaaatgttg
CAGACATAACTATTTCCGTTcacaaagttatgtccgcacagATTTGACac
agaaaaagattgaaaagcTTTAGCTCACtggtttttacattttaaatccT
TCCCAGATAATAGGAAACTAGAGCaagttgcaaaaaaacgccagtTATCT
TGGTCAacgcgaaaaattattttgaagtgaACAGTGTCTTGTTTCCGTTC
ACATCTTCGAGTTATGCCCGCACACTATTTGatcctttaaatttttcaag
gaaTTATCCTTACTCAGCTGAATCATTTTTCTATGTCAAGGGTTACATTT
GGGgtcattttatacaaatttgaagtcTCAATAGTGTGgttgtgttacaa
aaatacaggctgtttgtaggaaaagaataagatccagctgaaactttctc
cggACCTTCTctatttccttacctaactcgagatatttcatgcgcaagtt
ccacttttcgctacattttggtctaaaattgaccatatatatcatcttct
gcgtgaattatcttgagttaggtaatgaaatcggctatacccgtttaaaa
gtcttctatatagtttttcgagagctttcgaatggtatacttgataatgc
ctgaaaatgagtttgagattttcaaaatatttcgcccttaggattttgcc
tggggaaaaaagaaattgcccaaaaaaggatgttccaccagtgggatttc
aGGGGAATTTTTCcagaggcataaccatcctatagagaaggtccggagaa
agtttcagctggatcttatttttttcccttaaattatGCTAGACAACCCC
ACTACAAAGGCTATTTGTTGGGAGACAGTGAAACAAAACAGTTTCTGCAA
AAATCAGTTATGTCCACAACAAAAAtttatgtccgcaacaaatcATGGAG
TTTTCTCAACCTCCAAACACCAATTTTaggtttctttgacaaattattgC
ATCTAAGAAGGTCATTTTAAGTTGGTTACAACcagaaaaaagtttcataa
tTTTCCATTGGCAAGATTTCCAGTTTATTTACTTCTTTCATATGTATttc
atgttgcggacataactattttGTCTATAATGTTGTTGATAAAGTTTGca
attttttgtgtcctctaGGGTTGTTCTTCTATTAGAAATATTAGAAAATT
TTAATATCATCATCGagtcttcttttgttcttttcatgaagaaaaacatg
taataactgaatatattgatttagtctcgaatattccttaaattttggaa
acagaaaaagacactccaaaattttaaataaatgatGTGAAATGTTCTTT
GGTTCTACCctggaagaaaaaaagttatgtccgcaacatagcATTATTAC
CCATTTAACCCTTTCTATTTGAAAAGGTTGAGTGgcttttcaaggaaaat
cataTTTACTGATTATGAAGATGTACAACAGTTAATgtcaagctcaaaat
ttaacttttaaaattagatTATGACAAAAAGTGATATATGATTGGATTCT
ATTTTACAcataaatcttcaattttcaggaaatcatagttaaaaaagacc
tttcaagacaacaaatttcaatgattaagtAGAACAGCATATTTTATCTC
AAATGAAGTGTAAACAAgaaagagttttttgccaaatttgtctgATTATA
ACTACTCTTGGTCAAATTTCTGGACCAAGCCAGTTTGATTAAGCCCTGAT
Tcgggggggggactagggttggcgaatgagggtatgtgcggacgggacct
ccaaaaaccgacccttagagatactgatttttgcttaaaaaggtgaccct
tagagagactttttgaattttttttttcgatttttgaaaaaagtcatacc
cttagagagactttattacaattttttctctggaaatcaaaaaatttcct
aaaaatcctgaattttccgacccttagagagactaatttaaaacttcctg
atttttctgacccttagagagactttattacaattttttctctggaaatc
aaaaaatttcctaaaaatcctgaattttccgacccttagagagactaatt
taaaacttcctgatttttctgacccttagagagactttattacaattttt
tctctggaaatcaaaaaatttcctaaaaatcctgaattttccgaccctta
gagagactaatttaaaacttcctgatttttctgacccttagagagacttt
attacaattttttctctggaaatcaaaaaatttcctaaaaatcctgaatt
ttccgacccttagagagactaatttaaaacttcctgatttttctgaccct
tagagagactttattacaattttttctctggaaatcaaaaaatttcctaa
aaatcctgaattttccgacccttagagagactaatttaaaacttcctgat
ttttctgacccttagagagactttattacaattttttctctggaaatcaa
aaaatttcctaaaaatcctgaattttccgacccttagagagactaattta
aaacttcctgatttttctgacccttagagagactttgaaaggtaaaAAAA
CCGCCCcttcccgtccgcacatacccatcatccatttttgcctaagtgcc
ccccccccccgggccctgatatttatgttttctgaaaattgaagtcatta
ataaaaagtttatccaggaataaaagtgaaattcaaaaccttattttttc
gaaattttttcacCTATTTGGGTGACATTACCAGATTCATGCTCATAAAC
ACCTgtaaaagagagaaactttaAATTAAGTTTATTTACAGAATGGAATA
ATTGTTTTAattgaatgaaaagaaaaataatttttattacatgCGTGCTA
TTATTGTTTTAGGCGTGCTTAAATTGCACgccttggagtttttttaacct
ttttaggCGTGTTATTTTCGCACTCGTAAATCATTTTACACGTGTGCCAG
CGCGTGCGCTTGCTTTCGCACGTCATTCATGGCCAGGCCTGTAAATTGAA
TTTCTGAACCGGAATATTGATTTGGTAGTTTTGATTTCAGTTGGGAGGTT
TTTCCATAATAAAGAGCCAGAATTAATAAATGTTCGATCAGTGAAACGAG
TCTTAGATAAAGGCACCACAACATTGTTTTCAGCAGCAAATCTTGTTCTC
TGATGTCTGCCACTGACAAGATTCACCTCGTTACAGAGGTAGCTCGGTTC
AATTTTGTGAATGCCTTTGAACATCATAATGGCTTTTTTAATCTCTGCCA
TTTGTTGGAAAGTTCTGTTTAGAGGAGCTAGCCGATTAACGTTACGCATT
AAAGATTCAAATTTATTCCGATTTGCAGCTGACATAGCACTCCAAGAGTT
GGAATAGTAATTGACATGAGGCATGACAAGAGCGTTGGTTAAGCTTTTTA
GTATCATCTGTTAGAAGGCCCTTAGAAGAGATGAAATCCGTTTTATCCTG
TTTAAGGCAAGATAAGCTTTGCTTCAGACCCTTTTAGCCTGCTCATCCCA
GGTCATGTTCATGTCAAAGACGACACCAAGATATTTCACCTCCTTTTTAG
AGTCTATAGCATCACCTAGAAATCTGAGAGGAGGAATAGACTTGCATTCC
TCAACTTTCTTGGATCTACCGAAGAAGATGACATCAGTTTTAGAGGTGTT
AACTGAGAGTTTACATCCATAGAACCACTGACCAAGATCTGAGAGTTGAC
GCATCAGACCAGAGCATAATAAGTCAGGGTCCTCAGCACTCTTGATGATT
ATTGTGTCGTCAGCATAGAGATGGTAAAAAGTGCCAGATTTAATACAATC
TCCTATATCATTTATATACTGTAAGAACGGAAGAGGTCCTAGTACTGATC
CTTGGGGATCACACCAAAAggattttcttttgataaatCAGACATGGTGT
TTTCAAGAAGGGTGCACTGGAGTCTGTCACCAAGATACGATTGAAACCAT
TCAAGGGAGACATCCCGAAATCCGTAACAGAAAAGCTTCTTTAGGAGTAT
TTGGTGGTCTACAGTGTCGAAAGCCTTTTTGAGATCAGCGAGTACAGCTC
CGACATATTTACCCTTTCCTAACTCTTTAAGGATAAAATCTGAAACGCAA
ATGACAGCAGTGTCGGTAGAATGACCATGCCTGAAGCCACTTTGCGATTA
TGAAAGTATCTTAGATGAATCTAGAAAATCAGAGACCTGGTAATGcacaa
ctttttcaaacacTTTCATAGCGATAGGTAGTATAGAAATTGGACGATAG
TTGTTAACATCATCCGTATCGCCCGTCTTAAAGACTGGTGTCACCCTTTT
TTTCTTCCATGATTTAGGAACACAATCAGAAGACAGAGAAAGGTTGAAAA
GATGAGttagataaaaataaagaattggCGAGCCAGCTTTGAGTGCCCGC
GCCTGGCACAAAATATGCCAAAGCTTGGAAAACTTGAAAGAGGTTATGAT
ATGGTAGGTTAAAAGGAGTGAATTAAGGGGAAAATGTTTACCAGGTTGTA
GGAAAAAGTTTTTAATAGCCTTTCCAACCTTGGAGGGGTCTGAAAAGAAA
ACCCCCTACCGGTAGGGGTTTTCCACCCTAATTTGAAGCATAATAGATAA
GAATACAGCAGAGCTTTtaaattttcgtttaaaaatgaGATGTCTTATAG
CGTTATGTATAACCCTATAAAGTTCCAGCGCTAGGACATACCTACTTGAA
CTTTTATGGGCAATTTTCTTAAAGATTGCGTtttaagcagattttttttt
caagtttgcaATTGTTAGATTTATACCTCAAAATTAGCTGGAATATAGcc
aaatattctttttttttcaggtaacTTTACTTTATGGACCAGGGGGGGGG
gatcggtagtaaaatctcagacatatatgagtagtaaaatgatttttacg
aatttttacataccaccacccagccTCTTGGAAGaggagaattttttgtt
tgcagcaaacaactttctaacagaaaatattttaaaattataaaaaattt
cagattttttcagaaaactcatccaaaaaattaaaagaattacaaaaata
gctataatttgctaattttaccagtttaaactacccaggtagtaaaattt
tttcaacatttaacacatagatagataccacccattttagtatttaacta
ccctgggtagtaaaaattattttcgatttttcgtcacaccaccaccttGT
AAACGttattatgtctgagattttactaccgacccccccccctgtatgga
ccAGTGCaacacacaaagattaaaaatatTGGTTTAAAGGTTTAAGAAGA
GTATGCATTCATAAATTAGGGAGAAAAACACCTTCTGGTAGGTGTTTTTC
CGTTAGAATTATCATTAAATATGATTACTGTTTTATTTTCAGGATGGCAG
TCGTTCATATCGCATGAAATGGAAAGATACTTGGATACACGAAGGATTAA
TGCCTGCTTACCAAAACCTGGTGGATCAGTTTTGGACGGAACAAAAGCAT
GCAAATAAAGAAAAGCAGGTTGATGAAAGTCCAGAAGAGGTTtgtgaaat
taaaaatgacattttcagGGCTGGCCAATCGTTTTAAAAAGGGGGCTAAG
TAATATAGTGACAAAGGAAGCCACTATGGTTGAGGCCAACGggtgggaaa
atttttgaaattttggtactctTCATTGGCTTAGAAGTGGATAGCGATAC
AGATGTGTTGATGACTgaaatcaacctttccaaaaGAATTATATGATGTT
TAACAATTAAACcctaaaaatagcaaaaacaatctcaagtaaaaatataa
aacaaactGGCGTACCCGTTTATTATCAATTAGACCTTAggtcggtgttt
tttacactttacACTTTgggcaaaaaagtgaaaatttgaccACCGTTAGA
AAAGGAGTCAGTGTTATCTCACTATATACCTTAGTATCAGGCTtggaaaa
aactcaaaattccTCTTCTTGATGATTGCGAGAGAGAGAAAcagaaaatc
tttgtttttggaATATCTAATCCCTCTCCGCTCGAACAAAAAACAATCAC
ATATGTACAATCcgattttgcatctttgtggaACTTTTCATCCTAAAATg
ctcatttttctttatttcataccaaaaaaactgtttttggcGAGAAAAAA
GTGTCACGTTTTCGCCCAAcgtgtaaaaaacaccgacttGGCACTTGAGA
GTAATCATTCTGTCCTTCCCGTTTATTGTTAAGAAAGTAAACTAATTTTC
TTCACACCTTAAATTTTCAGCTTGACTTCACCATTAAAGCCCTGGATACA
CCACCAGAAGAAGACAAAACAAAAGAGGATAAACAGGACAACCAACAAGC
CAAACTGGAAGCAGAAAAGCAAAGCTTGGTGGATAATATTGAAAACAGCA
TCAACATGATTTTGCTGCCTGACACCCACAAAGATGAAGAAAAACCTGAG
GAAGTGAAAAATCATGAAGAAATGGAATCCAAAATAGAATCCAAAATTGG
TATATACGAACTTTAGACAGTTTTTTGCTCTTCCTTTGTATTAGAGTTGG
AGATTTAACGCTCTCTATTTCGATGTTTGTTCAATTTTGCTCATAAGATC
TTTCAATATTTCTACTGATACGTGTTCAAATGAATAGGGTTTTACCTATA
TTTTTCTCTCCAGCTCTATAATTCCATATTTATCTTGTATTCCATACGCT
GccatattcgatgaaatttctCAATTCTTCTTGACAATCGAACTTGACAA
ACGGTAACCGATGAGGGAATACTATTGTGTCCTGAAAGGGATTATCAGGC
TATTTAATAGACTTTGAACTGGTAATTTGtaattttggaattgaaataaa
ttctttttgaaacttgaaatgctaaaaaataattcgtcaagtttcctttt
taaaaaactttttttttatttcagaagaGAAAATTGGACGGAAACGCAAA
ATTCAGAAAGTCGCCAGGTCCAAGAAAGAAccaaagaaagtgaaagtaaa
agtaaaagacACCAAGAAGGTTGGAGAAGGAGacgaaaaagaaaacgaaa
acaaaCCTGATGCTGACGATTTTGACGACTTGGTCGATAAAAATGTCGAT
CACTTAACACCCCCTGATACTGATATCACATCCATGGAAGGTGGGGACGA
GAAGTTCGCTTATCCCGAAGACAAGGGTCCATGCACGTGTAATATTTGTG
GAAAAGTCATCTCTAATAAATATGGTTTGCGTGAGCATCAAAGTGTTGTC
CATTTCAAAAATGGGAAATTTCAATGCGAAATCTGTGGTAAACGTGTCAC
CAATAAACGTGCTTTGACTCTTCACATGACGTCACATTCCACCGAACGGA
AATTTGTTTGTGAGCTGTGCGGAAGCAGCCATAAAACGAAAGGAAACTTG
AATTACCACATCAAGACTATGCATACAATGATCAAAAACTTTCGTTGCGA
TATTTgcttcaaaacattcaaagtgCAAGCTGAGTTGAAAGAACATTGTT
TTACAGTGCATTCAAACGAAGGTGTTATCACTTGTATTGTGTGCAAAAAG
AAATTGACCACAGCTCTGTCTATTTACACCCACAGTGTGATGCACTCGGG
TGCACGCGAACACGAATGTACTGAATGTGGGTACGCGTTCAAGACGGCGA
CCGGCTTAAAAGAACACATGGTCACTCACTCAGAAGAGAAACCAGTTCGA
CAATGTCCTCATTGTGACCGAAAGTTCTATTCACGTTCTCAGTACAATGC
TCACGTGATGAGACACACCGCAGACGGGGGTTTGATCACCTACAAATGCC
CAGAATGTGACGTCAAATTTCAACACAAATCAAGTTACAATCGCCACGTG
ATTCGTCACCAACCTGGTGGGGATTTAGAATTCCCGAAGAAGAATCCTTA
TCTGCTTTTGGACGAATCAGAACTACCAGAAGGCGTTTGCCACAAATGTC
GAAAACATTACAGCTCCAAGTCAGGCTTCTATCTTCACTTGAAGAAATGT
AGGGATGGTATCGTACAGCAATTCCAATGTCCATTCTGCGAGCGTGGTTG
CTCAAACCGTTctagcttgaaacgtcatatcCAACGTCGTCACAAAGGAA
TGGAATTTGAAGGGCAGACAGTGCGTGGCCGTGAGCTTCAAACAGATGAT
GTGGACGATACAGGAGGTACACAACAGGCACAGGCTGTACTCACACAAGA
TGGTATTCAATACCaacaatatttcgaccatgGTTATGGTAACCAAATTA
CCACAGTTGATGCGTCGCAACTCACCGCAGTGGATGTTCAACTGCTCATC
GATACAGCAACGGCACAAGGAGATGGCCAGGCTGCTCAAATATTGAGCAA
TGTGAACCAAGTTGCTCAGCTAACACAAAACGGTGATAACACGCAAAGCC
TTCATATCGTCAGTGAGAATGAAGTAGCTCAGTTAGCGGCTCACTTGTCT
CAACACGGTGTTATTGTGCGTAGTTCGAACAATGTACCTTCCAACGAAGC
AACAGTACAAGGACATCATCTCATCGTCAGTTCCACACAACTGGACGCGC
GCACCGGCCAATTATTAATGAACGAAAATCAAGCCACACAAATCATCACT
GATGCAGAAGCTCTTCAAAACCGTGCGCAACTCGATAGCAGCGAAGCGGC
CGCTCTTGGTATCCAAACGACGGATCAAAACAATTTATTGCGATCAGAAA
ACGTTTTGCATTTCAACAACCGTACAGCGGTCATCCAAATCCAACACAAT
TCAGATGAAGTTATCACTAGCCAACAAGTTCTAACACTTCCTGAACAGCA
AGTCAACCAGCTGACCACGCAAGCCATCCAATCAATGAAAGACCTTCAAC
CGACAGCCACTATCACTGAAATCACAGACCAAGATACTACACAACAGTCT
TTCATTCAAGAAGAGCAGATTGTATCGAACATTACAGAAACGGATGTAGA
TGTAGGACAAGCTTATCAAGATATTAATCTTTAGATTCCTTATTGTGTAC
acaaataatttcattttgataCAGGTGGAACATTCTTAGTTTGCAGAAGG
TTTCTGTCCAATCAGAATTTTGCACTTAGCAGattcgttaattttttttc
agaaattatcGTGCTTGCTTGCCTTTTCGAAGGAAGAGAAAGATGTTCGA
TCTGACGTACACGTTAATTTTTATTAGACCCTCCTAATTTGGGCTGTGCG
TGGGTATGCTTTTTTCACGATTTTATGCCTAAAATGTAATATACTGAAAT
TACGAAAGATTCATTCTTATGAATTCAGATAATATTGAGAAAATTTGGCT
GATGGCTTCAATTCTCAGGCTGGTGACGTTCTTATTCTTCCCCAAATTTC
AACCTTTAAATGCTCTTATAAACGGGGTTTTAGTTAGAGAAACGTGCGCA
GTTTACTTTGATTTGTAAATAGCCgagttatttgataaaattagaATACT
GAATATGAACCTTAGGTCCTAGATTATATTTATGAAAAGATCTCTTTCAC
GGGATCTAAATAATagtcttttattttgaaaaaatatttgattctgtTCC
CGACCTCCTCCTTCACCCTCTTGAACTActgaaaactttcaattttcctC
TCACTGTAACTTAGTCGTTGTTTTTTGAACAGTGTCTctaatttcatgaa
attgaaTACTAAGAGTAAGAGAGTCTATTGGTTGTATCTGATTCCTCGTT
TCAACATTCTTTTCCAGAACCAAGAAGCtagtagcctgggaatccatgct
atgatttcttctttgataaactgatggcgaaatgtatagcatggtacggg
ctgaaagtttgaatttctcagatcctaataacggttgaaaacatacccaa
tcaaattttgttattcttttactggtcacactttcttagagaaagcccaa
ctttcgaaatttggtttttattttagtaagtgaggacagcgctaaattcg
aatttcccactgtaaaaaatgtgagtccaatattggactcacagcttgaa
cccgtcttgtgtacatcaaattataaaaaaacacacgacgggtctcctgt
ctaagAAGCTAGTAGTTTTTTTTAACATAAGTTACATcattcaagtgaaa
aaaaaagagaagagaTGAAGCTGTTAACAGTCTACTGTTATTCCTACCCT
TTTGATGTGCCCCCCTGCATGCTGGTTGTTTTCTCACCTAttttccattc
tatttttagCGCAactactgaaaaataaaaacaacaactaGGAAATTTGC
AAAATAACTAAAAATTTTGGCAGATGAGTTGTTTTGTAACTTTAGAAGCT
TAGGTAACTATGgtgatttatgattttgatACTTTATGTTTTTTAACATT
GATTCTTTGTAATTTGGTGCCTTTATTCTcagtattattttttaaagttt
ttgataaCTCTCTGAAATGAGTAGGCCTCGCGGACGAGAGTCATGGCTCT
ATCTATGTCCAACTTCACCCAGTAATGGGTAGTTGTAAAAtcattattta
ttattaatAGTATGGCTCCGTAATAACTTGTATGTATAGACGTCATTCGC
TAATATACAGGAAAACTGAGTTCCAGTCTTTACATCTTTCTAACGAACCT
TCTCCGAAAGACATCAAGCTTAGATCTAAAAACTATATTTGGAGCTTTCT
ATGAAACATTTTTACTGTCATTATTGTAGGCACAAAAAGCTTGATATCGA
GTCGAGACCACCCTCAACTTAACAACAAAACTGCTCTGCTGGTTGCTACC
TCACTCACACACACTCTAATCTGCCCAATTATAAAGGTACGTTTACACTA
TACACTCTTTATCGCTCTTTTCCCTATTTAACATTATTCAgcagtttttt
attctaaagtTACGGAATCTGGTAATCATATTCGCGAGCTATTTAAATAA
TTCATGGTTGTTCTAGTGTAGATAGGGCCTTAAAGATTGTTTGAATAATA
AACGAACAACTTTCTCTTTGAAACGTGAAACAGTGCAcggtttcaaataa
aaagacgTGAGAAATCGCACGCATAAAATCTCAAGTGCTGAAACATATAA
TTTCATTTTCCACAGAGATCTTACTGAAGGAAGCCGTATCAATTATTTCT
CACTACTGCTAGTggtttatatatattttttttctgtgtgtgtgtgtctc
tTTAGAtaccattttgatattttcaatattttggaaGAGAGATCTTCTCT
ACAGTACAAATATATaactttcttattttttctacaGTACTGTACTTTTC
TTTTAGACAAATGGTGGTACAATGAGAATCCCTTTGATGGCCGAACCTCA
GCATTGTGAACGAGGTAGTATCACAGACGAAGAAGATGACCAGGCCGAAT
CAGCGGAGAACGAGCAACATGCTGTTCGGAAAACACCTCCGAAGTCAACA
GTCAATAAACGGGTTCGCGTCCCTGAACAATACTATTGCTTATCAATGGA
TGAATTACGAACGTATGAAGGTTTTCTACGAAAGCTTTTGTGTTCTTCTT
TAAAGCGTGTTGGTGTTTGTGTTCTTAAAGACTTTCTACCTTCATCATTG
GCAGAGTTAGTTCACAAAGAAACTGAAAATCTATTCTCTGATAGCTGTGG
CAATGGTGATTCAACCAAAACTCAAAAATCGAACCCTAATTTTCGAAGCG
ACGAAGTAGCTTGGGTTGGAAGTAAAGACACTAAAAATACGGCTCTTAAT
AAACTGAACTGTACTCTTCAGAACCTTGTAGTGTCTATGGCAGGTTTACC
AGAGTTGCAACAACATCGTTTTAAGATCACTCATAAATCGCATATCCAGG
TCTCCAAGTTTCCGAAAGGTTGTGCAGTCGGTTATAAACCTCATATTGAG
AATCCAAACAATAACGGACGATTGTTATCTGTTGTTTATTACACCAATAA
AAATTAttcgaaaattgaagatgaagGTCTGGTTCGATTTTACCTGAAAA
ACAATACTCGTTTTATTGAGGTAGAACCATCTTTCAATACTGCAGTTATA
CATTGGTCTGACCAAAGAGTCATCAAAGAAGTTTTATCTTCCAACACTAG
AGATATGTACCATATAACGAGTTGGTTTTTTGGTTCGTGTACTTTGAAGT
AACATACATTATCCGTTTTTGTTTGATTCAATATCATTTGAGTGCTTGGT
GAATGGAATCAATTCCGGCATTCTCTCAGAGTAAGGAAAACCTCAAATAT
TTTCCACTGTGACAAACCTATGGAATGGGTGGTATTGGATAAATAGAGAG
CacttttttgctgaaattttgcagatttcagGGTTGTGATAATGTAATAT
AAAGCATTTCGAGCAAGAAATCTATAACTACCTTTCATGTCATTTGAGTA
GTAACCTTAAAACAGACCTGGTGGTGCCTCCTTAGTCAGTATATCACTTT
CAAAGTGAAGCCGCGGTCCCTGGGTATTCTATATATTGGATGTAGCCacc
aatttcttttgaaaattttataacGTTATATATAGGTAGGTTGTAAATAC
TGTCGATATATTTGAAAAAggattttataaatattttatgCTCGCTATCT
AAATAATTAAACTAAAAGACAAAGTTTGATTCGAACTGATTTCACTAACA

Coding sequence (CDS) from alignment at scaffold_152:108727..131176+

>TCONS_00049118 ID=TCONS_00049118|Name=TCONS_00049118|organism=Clytia hemisphaerica|type=CDS|length=831bp|location=Sequence derived from alignment at scaffold_152:108727..131176+ (Clytia hemisphaerica)
ATGAGAATCCCTTTGATGGCCGAACCTCAGCATTGTGAACGAGGTAGTAT
CACAGACGAAGAAGATGACCAGGCCGAATCAGCGGAGAACGAGCAACATG
CTGTTCGGAAAACACCTCCGAAGTCAACAGTCAATAAACGGGTTCGCGTC
CCTGAACAATACTATTGCTTATCAATGGATGAATTACGAACGTATGAAGG
TTTTCTACGAAAGCTTTTGTGTTCTTCTTTAAAGCGTGTTGGTGTTTGTG
TTCTTAAAGACTTTCTACCTTCATCATTGGCAGAGTTAGTTCACAAAGAA
ACTGAAAATCTATTCTCTGATAGCTGTGGCAATGGTGATTCAACCAAAAC
TCAAAAATCGAACCCTAATTTTCGAAGCGACGAAGTAGCTTGGGTTGGAA
GTAAAGACACTAAAAATACGGCTCTTAATAAACTGAACTGTACTCTTCAG
AACCTTGTAGTGTCTATGGCAGGTTTACCAGAGTTGCAACAACATCGTTT
TAAGATCACTCATAAATCGCATATCCAGGTCTCCAAGTTTCCGAAAGGTT
GTGCAGTCGGTTATAAACCTCATATTGAGAATCCAAACAATAACGGACGA
TTGTTATCTGTTGTTTATTACACCAATAAAAATTAttcgaaaattgaaga
tgaagGTCTGGTTCGATTTTACCTGAAAAACAATACTCGTTTTATTGAGG
TAGAACCATCTTTCAATACTGCAGTTATACATTGGTCTGACCAAAGAGTC
ATCAAAGAAGTTTTATCTTCCAACACTAGAGATATGTACCATATAACGAG
TTGGTTTTTTGGTTCGTGTACTTTGAAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031214XLOC_031214Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049118-exon-scaffold_152-1491911889:108727..109769TCONS_00049118-exon-scaffold_152-1491911889:108727..109769Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1510915933:108727..109769TCONS_00049118-exon-scaffold_152-1510915933:108727..109769Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1575043694:108727..109769TCONS_00049118-exon-scaffold_152-1575043694:108727..109769Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1491911889:123969..124115TCONS_00049118-exon-scaffold_152-1491911889:123969..124115Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1510915933:123969..124115TCONS_00049118-exon-scaffold_152-1510915933:123969..124115Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1575043694:123969..124115TCONS_00049118-exon-scaffold_152-1575043694:123969..124115Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1491911889:124847..125075TCONS_00049118-exon-scaffold_152-1491911889:124847..125075Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1510915933:124847..125075TCONS_00049118-exon-scaffold_152-1510915933:124847..125075Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1575043694:124847..125075TCONS_00049118-exon-scaffold_152-1575043694:124847..125075Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1491911889:125501..125716TCONS_00049118-exon-scaffold_152-1491911889:125501..125716Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1510915933:125501..125716TCONS_00049118-exon-scaffold_152-1510915933:125501..125716Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1575043694:125501..125716TCONS_00049118-exon-scaffold_152-1575043694:125501..125716Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1491911889:128786..128879TCONS_00049118-exon-scaffold_152-1491911889:128786..128879Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1510915933:128786..128879TCONS_00049118-exon-scaffold_152-1510915933:128786..128879Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1575043694:128786..128879TCONS_00049118-exon-scaffold_152-1575043694:128786..128879Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1491911889:129256..129362TCONS_00049118-exon-scaffold_152-1491911889:129256..129362Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1510915933:129256..129362TCONS_00049118-exon-scaffold_152-1510915933:129256..129362Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1575043694:129256..129362TCONS_00049118-exon-scaffold_152-1575043694:129256..129362Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1491911889:129833..131176TCONS_00049118-exon-scaffold_152-1491911889:129833..131176Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1510915933:129833..131176TCONS_00049118-exon-scaffold_152-1510915933:129833..131176Clytia hemisphaericaexon
TCONS_00049118-exon-scaffold_152-1575043694:129833..131176TCONS_00049118-exon-scaffold_152-1575043694:129833..131176Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049118-proteinTCONS_00049118-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_152supercontigscaffold_152:108727..131176 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0341867	0.0340163	0.0711891	0	0	0.172955	0	0.226501	13.7014	11.9588	6.27623	9.83189	4.90237	2.80385	0.267477	0.0745308	0.191279	0.310187	0.556966	9.22071	0.152638	0.429553	0.141237	0.478212	7.46939	10.1254	0.688263	0	0	0.179158
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006620Pro_4_hyd_alph
IPR005123Oxoglu/Fe-dep_dioxygenase
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0031418L-ascorbic acid binding
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0005506 iron ion binding
molecular_function GO:0031418 L-ascorbic acid binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Blast
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BLAST of TCONS_00049118 vs. Swiss-Prot (Human)
Match: EGLN1 (Egl nine homolog 1 OS=Homo sapiens GN=EGLN1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.843e-21
Identity = 54/197 (27.41%), Postives = 98/197 (49.75%), Query Frame = 1 
Query: 2080 LKRVGVCVLKDFLPSSLAELVHKETENLFSDSCGNGDSTKTQKSNP--NFRSDEVAWVGSKDTKNTALNKLNCTLQNLVVSMAGLPELQQHRFKITHKSHIQVSKFPKGCAVGYKPHIENPNNNGRLLSVVYYTNKNYSKIEDEGLVRFYLKNNTRFIEVEPSFNTAVIHWSDQRVIKEVLSS-NTRDMYHITSWFF 2661
            + + G+CV+ DFL     + +  E   L            +QKS+   + R D++ W+  K+     +  L  ++ +L+    G    +   +KI  ++   V+ +P G   GY  H++NPN +GR ++ +YY NK++      G++R + +   +F ++EP F+  +  WSD+R   EV  +  TR  Y IT W+F
Sbjct:  202 MNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNG----KLGSYKINGRTKAMVACYP-GNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATR--YAITVWYF 391
The following BLAST results are available for this feature:
BLAST of TCONS_00049118 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EGLN12.843e-2127.41Egl nine homolog 1 OS=Homo sapiens GN=EGLN1 PE=1 S... [more]
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