TCONS_00049104 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049104
Unique NameTCONS_00049104
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1172

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049104 ID=TCONS_00049104|Name=TCONS_00049104|organism=Clytia hemisphaerica|type=transcript|length=1172bp
TAATTCAGAACCAAATATGATCAGTAAGAAACATTGGGGAGAGTTAGAAG
ATAGTGAGGAATTTGTTGAAAAGAAGGATGCAAAACCAGATAAGATGCGC
TCTACAAGTTTCCATAATTTTGAACTTCCACCACTCTATCAACCTGTCTG
TCATCAGAAATCAAATAAGAAAGAGTCCCTAAAACGAAGTTGGATGAAAG
GGCCTCTGGACAGTAAAGGTCAAAGCTACCTCTTACATGCGATCGAACTT
CAACATTACAAACGACGCATGAAATACATGTTGGCTGCTGCCCAATCACA
TCAAGCTGAAGTTCAGAGGGGGAATGTTCCAGAAGTTCAAATGTTACCAA
CACCTCCACAAGCACCAAAACGATTCTGTTCAAACGAAGGGAAATTGGTC
TCCCAAACAAAACCCTCCTTTCTAGGTGTAGAGTATTCAGCCAGTAGCAG
TAAGAAACGTAGCAACGAATACAAACATTTTCACAACCCATTGGTGTTAG
ATGCTCTTGCTGTTCGCCAGTTGATGATGAAAGCAGTGGCTGCCATCTGC
TCACATACTGGATTCGAAAATAAACGTTTTCCCTTCACAGCTGCCAATGA
GACAACCTTGCAAACACTGACGGACATCGCCATTGAATATTGTTGCAAGT
TTTGTTGCAAGTTAAAAACATACTATGATCACCAGCCGAAAGGAGAAACC
TCCATCGATGGATTTGTTCACGTGTTACAACAAGTCAGTTGTGAGGGTTT
GGATTCACTGCAAGATTACTGGATCACTCGTATCAAAAATGTTGCCTTGA
AACTGGAAAAAGAAGATAAACAACTTCTTGATGATTACAATGCACTTAAG
GATTCCACGAGTCAGCAAGTGACAATCAAAGAAGAAAAACCGTAACACCA
CTGAGCTGATGCGTGGAGAAGGAAAAAGGTGGCAGAATAACGTGTTGCAA
AGACCATATACCTGCATTAGTATAACTTTTTGTCATCCCCGTACAACATT
TGAACATGAAACATGAATactaacaatccaaaagttcacGAATAAATGCG
AACATTTTGAGATATGAACCAAGCTAGCTGCTCATGAAAACTGTTCAACA
AAACTCTCCCGAATTTGGTTCCAGCTTCGTTTTTTAAACTCCAAATTGGC
TCTACCGTAGCACTATCCGAAT
Run BLAST on NCBI

protein sequence of TCONS_00049104-protein

>TCONS_00049104-protein ID=TCONS_00049104-protein|Name=TCONS_00049104-protein|organism=Clytia hemisphaerica|type=polypeptide|length=297bp
NSEPNMISKKHWGELEDSEEFVEKKDAKPDKMRSTSFHNFELPPLYQPVC
HQKSNKKESLKRSWMKGPLDSKGQSYLLHAIELQHYKRRMKYMLAAAQSH
QAEVQRGNVPEVQMLPTPPQAPKRFCSNEGKLVSQTKPSFLGVEYSASSS
KKRSNEYKHFHNPLVLDALAVRQLMMKAVAAICSHTGFENKRFPFTAANE
TTLQTLTDIAIEYCCKFCCKLKTYYDHQPKGETSIDGFVHVLQQVSCEGL
DSLQDYWITRIKNVALKLEKEDKQLLDDYNALKDSTSQQVTIKEEKP
Run BLAST on NCBI

transcript from alignment at scaffold_152:11708..21756+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049104 ID=TCONS_00049104|Name=TCONS_00049104|organism=Clytia hemisphaerica|type=transcript|length=10049bp|location=Sequence derived from alignment at scaffold_152:11708..21756+ (Clytia hemisphaerica)
TAATTCAGAACCAAATATGATCAGTAAGAAACATTGGGGAGAGTTAGAAG
ATAGTGAGGAATTTGTTGAAAAGAAGGATGCAAAACCAGATAAGATGCGC
TCTACAAGTTTCCATAATTTTGAACTTCCACCACTCTATCAACCTGTCTG
TCATCAGAAATCAAATAAGAAAGAGTAAGTTGAAGTACTTCTTGGTTGTT
TCTATACATATTTTTGGATTATTTTTTAATTCCCAAACTCTTCTGTCAAG
GTCAAGTTTGAATTTCAATGCTAAAGGTTTACTACCATTACTGTAACCAT
TACAAAATGATTAAAAAATAATAATTTTTTCTGAATTCTTTTCAAAGCAA
AGAGGTAATAGGAAATCTTGTCGACGAATCTTTTTTTACAAGCAGAATAT
GTACAATGAGAGCAATTGTTATTAAAAAAAGAATGAATTTGTAAAATAAA
ATGAAAATTGACCTTGGAAATGATTTATATATCTATCTATTTTCAGAAGT
TTAAAGGATATTCTTTTTCATGATATAGATAGGAGGCGCTGACAAAAAAG
ATAAACAAAGAAATATGTGTTGTGCTTGTGTTTATTATTGTTTAGATATT
CTTGCCTTTGTTTAAAAAAACTGTGCCATTAAATGATGTATTTCCTATGA
TTGTTTACTTGTAGGTCCCTAAAACGAAGTTGGATGAAAGGGCCTCTGGA
CAGTAAAGGTCAAAGCTACCTCTTACATGCGATCGAACTTCAACATTACA
AACGACGCATGAAATACATGTTGGCTGCTGCCCAATCACATCAAGCTGAA
GTTCAGGTACAAACAAACATTCCCCTATATTCATTAAAATCCctttagta
aaaaaaattcatgtctTACACcaagaaaaatgttattttgtAGATTAAAA
ATTTTTCGTTCTTTGATTATGACACTCActaaaattttttgagaaagtgG
CGTGTTGTTGATTTTATTTCTATGTTGATAAACAAACGGTTACACAACTG
GTGCTACTGTGTCTTAATGCTAAAGcaagttttaaaattgatcCAAAAGT
TTAATTAGAGCCAAGATGTGagtaaaaataaatagaaaaggATCACTTAG
CAGAAATTTGGACGCTGAGAGCTTCAAAACATCCCACTTTTGTTTCCCTG
CCTCATTCATGAAGCGTTTGAAAAAATTAGGCATTGTGGGTACTTATTTT
TCAAACTGAATATATTTTTGCCGTCTTACAAAGAAAACGGAATAGGAAAT
CACCTGTGTATTCCGATCGGAATAATAACTAATACTTGCTTAGCCCTAGC
GATGATCGGTTCTAGAAACCCGTTTGGGATTGTTTTACCGAAAACATAGA
AGAATCGGATTTAAACTTTGAAGTCTTGACGACGATCAGTCGAAAAAAAT
TGTGGAAGGGATCTAaagggtcaccggggctgaccaaAAATGACAATGAC
AATTCAAAATAGATTTCAAAATAGTAAATGTTTGATTGatgaattaaaaa
attatcgattgaaaagtatataatagataaaagttaaatcaaaactacac
gttttttttttttaagaaacacacttttaagaaacatgaggcttagaatg
cctaaaaactaagaaacatctaagaaacatgctgaggctgaNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNagaaacatttaaggctcaaaaggctga
tttcttaagaaacattgaggctgcttggtaaaactagtttcttaaaaaaa
aaaaacgtgtatattcaTCAAGAAAATTGTATATAATACAGCTTCTTAAC
GTATCATAAAGTGCTTTTTATTATATGTGGATGTAGGAAAACAAAAAGTA
TCtaaatgaaatataaaaaaattacaaaacaaaataatcaaaTCCATAAA
TCATAGCTTTATGTAGGAGAACCTCACCACCCTGTTAATTCGAAAAATAG
ACCCAAAATGTTTTATAACAATCCTCCAacaattgtaaaaaaaaattgaa
ttgaaaaataaaaaaattacaaaacaaatTAATCAAATCCTTAAATCATA
GTTTTAATTGTACCCCCACCACCCTGTAAATTCGAAAATTAGACCCAATT
TTTTAGCAGTTCTCCAAAAATTGTAAATAGCTCCTAAATGTATTATAAGT
GCTTATAATATATTGTAAGGGGCTTTTTATTATACATGAATGTAGGAAAA
CAAAAGGTATCtaaatgaaatataaaaaatctacaaaacaaATTAATCAA
ATCCTTAAATCATAGCTTTATGTATGAGGACCCCATCACCCTGTAAATTC
GAAAATAGACCCAATTTTTAACAATTCATTCAAATTCTCAATTTAAACga
taaaaaaaacgaaaagtaTATCTATCTCAATGAAGGAGGTAACTTTTTAA
TCGACATTGGAACTACTATATTTTTTCCGTCAACTATATCAATCAATCGA
CTACAAAAGATTCTAAATTTACAAACGGTACGGTAAATAAATTGACCGTG
CATCTCATAATAGTGTTCAATGCAGTGTATGGtagcttttgatatttttc
atctGCTGCTGGAGGTAGTATAGTAATGACATTATGCCACTCGAAACCAT
ACACAGAGTAATATGGGACAATCAAGACTGTCCTAGTACCTCTACGTATT
AAAGAATGGTAGGCTTTCTCTCCTTTCTTTGACAGTAGAGAAGGTTCAAG
GAGTGAGCTGACACAACTTTCCACTTTATTTCTAACCATTTCCATTAATC
TTGTGTCATTGTAAGGCGGAACAATCAAAAGAATTCCTCCTTTTGTGTTC
TTCTGTGCCTTTATTAGAGCGTCCTTTAAGTCCGTGCAATGTTGAGGACC
ATTACCGCAAGGGGAGTTCGCCAACACTTTTGGTTTGCCGAATATCTTCT
CATATTCATCTGTTATTTCTTTAATACCCGCCTCAGTAATACTTTTACAG
TTTCTCAGATTGTAATCTAAATGAAACGTTTGAAATGAAGATGAATCATT
TTTTTGGTTGTGTTTGTCCAAATCAGGGGCAAGCCAAACccattttttat
tatttgattCACTAATAATGTCATTGGGATTGCCTTTGAATTCATCACAA
AAAATAGCTGTCATTTGATTGCTCGTTGTCATCAAATCGTCTTTGTTAAC
CTAAAGcataaaaaaagggttttgtGGTTTAAGTTTGACACATTAGTACA
CACCTACATTAAAAGACATTATCTTTTAAAAACAACATTAAAAGTCTAAA
CCACTATAAGAGTCCTTAACATCAGACAAAATTCATATTTCAGACAAGCG
CCACATATCATTATTTGTAAAACCTGTGAGTTTCTATCATACTCAACGAG
ggagaaatttgaagaaaaattaaattccttaCATCTTTGTTCACAAATTC
CACTGAGATTCCCTTTAGACCTTTCTTCTCTGAACGGTATTTTAAATGTT
GATGAAATAAGAAATGCGTCTCGTCTTGAATTTCGTCCAACTTTTGCTCT
GGTGCCATAACCAAGTATTTGACCTCTATATTCTCTTTGTGTTGCTTCTT
CAACTGTTTGGCTTTTTCTTGAAGCAAGAGACTTTTTCCTGTACCGTGGT
GTCCAGAAATGAGGAGGTTCTGGTACTGAGATTCCATGCAAAATAGATCC
AATTGTTGTTTAGAGTAAAAGATGATATTGCTTTCGTTGGAGACTGCTTC
TATTGCGTCGCGAATGTAATCAACCCAGTTCGCAGGGGTGATAGGGCGTG
ATTTTGTATTGTGAATGGTGTAGATGAAAATTTGAACTATCTTTTTTAAC
GagtcctaaaaaataaaaacatttttttcatttttccattcTCCTTGTCA
GTTAGAcaggacagacagacagacagacagacagacagacagacagacag
acagacagacagacagacagacagacagacagacagacagacagacagac
agacagacagacctTCGAATCTGTAGCTGATCCGTTCATAGATGTGACAT
TTCCATTCTCGAGCACCCCCTGTAGCCATGATCTTATATTGGTTGAAGTA
TTGATGACATTAACGTGTTCTTCGTGAAGGTTGAAAGGATCCTTTTTAGA
GTGATATCCAAAAGCTGGAATGAATTTCCAGCCGTCTAAAATATCTCCAA
ACAAAGTGGTTCTGTATGATTTCCTTTCTAGTCTTTATCTAATTCACGAC
ACATTTCTTAGCATCTAAGATATTTTGCTCCGTTGCGCTTCGCTTTAGCT
CCACTGCTACGAGTTGTTTACACGGNAAGATATTTTGCTCCGTTGTGCTT
CGCTTAAGCTCCACTGCTACGAGTTGTTTACATGAGTGTGCGAAGATGAG
CAAATCAAATTCTGCTCCTCCAAACCCTTTCGCTTTGATATCAACTGAAC
GAAGGACAACGCAATCTTTTAATAAATCTCTGTTGTCTTTGAGCGCATTG
AAAAACCAGTGCTCAATTTCCTCATCGTCACGTACGTTTTTCACTTTATC
TAGCCATTCTATGACATTGGCTGGTCCagtcactgaaatttcattttgaa
actctTGTTTAATGTTTTCTATCCAGGTTTCTAATTGGTTTTGGTTAATG
CCATCTGAATGTTCTTCAAGAAATTTTTGTAGCTCATCTCTGAACCATTG
TGGCATTTCTTCATTTTCGGCAGTTTCTTTAATGTGATTTACAAAATCAT
AATCCAATGAGGTTATCAATTTTCCTTGTGGtatttcaaattcaaagaaG
TATTGTATAGTCTCTTGAATACTCTTTTTCTCAATTTCCTCATCAAGAAG
TTCATTCAATCTTTCCAAATTGTCCATTGTTTCTAAGATTCTTTTCAAGC
TGTTTGATAAATCCTTATTGGAAAATCTTTCGAAGCAAATTCGTACAAAT
GATTCTGTGCTGTGGTGTCTCATAGTAAATGGTATCTGAcgcaaatcttt
gttttcgagCTCTTCATGTAAAagatatttgattttaactCGCAACATCC
AATCCTCAAAATCATGATTGTTTATAGCATTCGGTATCGAATCATTATTG
TTCGAAAGCTTCTGTTTTCTTTTCTGTTCTTGAAAAAACGCTTTAAGTTC
CTTCTTAAACCAATGGTTGTCCGTTAGTTGATCATATTGTGTCTCTATTT
CGGACAGCATTTCCTTATCTTGAATATGGTCAGCAACATGATGCTTTGAC
ACAAAAACAGGTGGTATGAAAATCGATTCACCTTCTTTCTGGAAAAGAAA
TGAATCTCCGTATTCTCTCTGCAAAAGATGTGCTGCGGCTTCTAAAGGCT
TTCTATTGCGCTGCCCATTTCCAAGTTGAAACTGTCTTTTCTGATTTGTT
GTCGGCCCATTTTGTTCTTCAAATATTTCTCCAATGACTTTTGACATCTT
GCTTTATCGATCATTTTTTCTTGTAAGGTTTCTCTTAATTTTTGGACGAG
TTCCTGTCTCCTGTCACCATTGCTTTGCTCCTCACTCATCTCTTTAGATT
AGTAATGAGTTTGCCTCCTTCACAAAACGTTTCATGATGGTCTGAGTAAT
AAATAATTCTTAGAAAACGGTTAGACGTTTCTCTTATTTGAAAATTCTGT
TAACCTTTacgaaacttttttttatacaGCTCCCCTTTCTTTTAAACCTT
TTAGTACAGTTTCCAAGTGCtgtaattgtttttttgtttttttttgcttg
tgtaTTGACTGCTGTGTAACAGAATACATAGTTcatcttttataagaact
ttttctTTCAGATGATGCTCGTGATCCTTATTTTTTGACTCGACCCTAAG
AATATTCTGTAATGATTCTTAAATATTCAAGATTGACTCTCCTTCGAAAT
TTATTCTACTCCCCATTTACTTTAGAActtatttgatttaaaattaggaa
gaaattaaattcttatttaaaaaatgaaatttgtatAAAGATAACGATCT
GTTGACCAACACTTAATTTCCTACAAAATATTATACGATTTTTGCGCTCG
CCTTGCAATTGAGAGATTAATGGGGCTTTTTCTTGTATATCTTATTCTTT
atactttatttataagaacgaactatataagagcattaagactttgatgg
ccaaaatattaagaacattttaacttAGCCTTTGCAgattctaaaacacc
caatcTCCTAAAAGATTGCACAAAATTTGGTTAAAAACTCataaagttaa
gagcatccgaaggcttccGAAACTTTGGGCGTTCTTGTTACAAAAGCACG
TACATTGACTCTTGACCTCGAAAAATCAAAGGGATATTTTTGCAAGTTTG
ATTGGAATTTTTTACATTGCATAATTTACTATTGCTGTTGAAACTCTCTG
GTGAAAAATCTTTTAAGATAATCTTTGTAattgaatctttctttaattcg
aaggGATAATTATTTGTCCGTTgcagatcgaattagagagagtcaaatGT
AGTATTATACTTGTTTTTTCTCAGAGGGGGAATGTTCCAGAAGTTCAAAT
GTTACCAACACCTCCACAAGCACCAAAACGATTCTGTTCAAACGAAGGGA
AATTGGTCTCCCAAACAAAACCCTCCTTTCTAGGTACAGTATACTATGTG
TAATTTTCGAACATTAATTTGTTTAACTTTTCGACCATAGTGGGCAAAGT
GTCATCTCCACTTACATAGGTTTATCTCAGTACATCAAATTGCATTTACA
TCAAATTGCTCATCAACCCAAACCCCAATCTGAATCCAGGGGGAGTTTCC
ACTATGATGGTTATAATCACCTAAACTCTTTCAAGGAAAtaagtttgttt
tttatctttagcCCAGTTTTCTCCAGTATTAATTAAAAAAGGGGCCTTCC
TGACCAACGTTAAGAATTTCTGTTCCGGTCAGAGACGAGGCCTTAAATAA
TATTTTGGTGTAGTGTATACAATGTATTTTGTAAGCAAACTTTAGGTTGT
ATTCTGCACATGAGTAGAAGTATGTATAGTTTATGTCTTCAAAACCACTG
ATTTTATCACGTCTCTAGGTGTAGAGTATTCAGCCAGTAGCAGTAAGAAA
CGTAGCAACGAATACAAACATTTTCACAACCCATTGGTGTTAGATGCTCT
TGCTGTTCGCCAGTTGATGATGAAAGCAGTGGCTGCCATCTGCTCACATA
CTGGATTCGAAAGTAAGgcttgtacacgttttttcataagaataaactat
ataagagNCGACCCTAAGAATATTCTGTAATGATTCTTAAATATTCAAGA
TTGACTCTCCTTCGAAATTTATTCTACTCCCCATTTACTTTAGAActtat
ttgatttaaaattaggaagaaattaaattcttatttaaaaaatgaaattt
gtatAAAGATAACGATCTGTTGACCAACACTTAATTTCCTACAAAATATT
ATACGATTTTTGCGCTCGCCTTGCAATTGAGAGATTAATGGGGCTTTTTN
CATCTTAAACCATTATCTAGACAGgatcattttaatgacgacacTCTAGT
CTGGAGACTTACTTATTCCACAAAAATCTTGTCAATAGATAAACGTTTTC
CCTTCACAGCTGCCAATGAGACAACCTTGCAAACACTGACGGACATCGCC
ATTGAATATTGTTGCAAGTTTTGTTGCAAGTTAAAAACATACTATGATCA
CCAGCCGAAAGGAGAAACCTCCATCGTAAGTGATGCTCTGGAAACCTACG
ATTCTGACGGATAGAAGCTCATTTCTGAGTATTTTCCAAAGTTCAGTGTC
GATATTATATGATTGCCAATTCAGCGTCGCAGCTTTCCCGTCTGTACAGA
CTTTGAGTGTTCAAGGGTTTGAAGGGATTAAAAGGCTTTCCGTTCAGCAG
TCTAGTAtatatactagacgtcacctgcgtttttttctacgcaatttgcg
tatcaaaacacttgaaagtcttctatttttcagaaatcgtcaaagtggaa
ctcactaagaaacgggatGAAAAATTCTGGTTTTTGGTGAGCACCGTTAT
CCATCCAGCAGTGAGACAAAAAACTGACCCGTTTTTAGTTCGAGTTTGAT
TCATCTTATTTTCAAAGTCAAGTAGTGAATCGATAATATTTTGTAGTTGG
TTTAAAGGCTACttctatttgtattcttattTCGGAGATGATCATTTCTC
GAAAAAGGAATAATATTGTCACGTTTTTGTTTCACAGGATGGATTTGTTC
ACGTGTTACAACAAGTCAGTTGTGAGGGTTTGGATTCACTGCAAGATTAC
TGGATCACTCGTATCAAAAATGTTGCCTTGAAACTGGAAAAAGAAGATAA
ACAACTTCTTGATGATTACAATGCACTTAAGGTATTTATATTTGTATATT
ACACTTTCTTCTTGTTGAGTTGAACTCTCATTCATCAGAAGAGTGCTTGA
TCGATCGGAATCGGAAGCATATATATGCTATTGTCGAATGAAATTAAtgt
gttttatttcaaaactaacAGTTTCACACCGTGGAGACGatcatcagttg
aaaataaaatttaaaaaaactagaatAGGCGTTCATTCAACTTCATTCGA
CAATAGTATATATTACACTTTGATAATACGAATCGCACACGCCTGATAAA
CTAGAAGTATTTGGAAGCACGAGAGGATGCCAGTAGCGTAACACCCTTCA
CGCATGACATACCttgttttcattgtttttttttacaaaattaaacACTA
CACTGCTGAGGTGATAGGATATTGCTGAAACGACATTCAATAAAATATAC
AGGAGTTATACTTATACAGAAGTTACATACTTGGCACGTTTTAACTTGGC
AGCtaagtaaataaggaactcgataaggaactttgaggctgaaactcTCT
ggaaaaaataaggaactccaggctcaaattaaggttccttataaaaaaac
gcgtagCACACATCGTCgttaaaaatcaagttttgctTGTGTTTCTGGTG
TTTGTGTTAAGTAGCCATTATTCTGAAATACAAAGTCCAATGGAAATTTA
CAATTCGATCTGCTTTACTCTATACAGGATTCCACGAGTCAGCAAGTGAC
AATCAAAGAAGAAAAACCGTAACACCACTGAGCTGATGCGTGGAGAAGGA
AAAAGGTGGCAGAATAACGTGTTGCAAAGACCATATACCTGCATTAGTAT
AACTTTTTGTCATCCCCGTACAACATTTGAACATGAAACATGAATactaa
caatccaaaagttcacGAATAAATGCGAACATTTTGAGATATGAACCAAG
CTAGCTGCTCATGAAAACTGTTCAACAAAACTCTCCCGAATTTGGTTCCA
GCTTCGTTTTTTAAACTCCAAATTGGCTCTACCGTAGCACTATCCGAAT

Coding sequence (CDS) from alignment at scaffold_152:11708..21756+

>TCONS_00049104 ID=TCONS_00049104|Name=TCONS_00049104|organism=Clytia hemisphaerica|type=CDS|length=6258bp|location=Sequence derived from alignment at scaffold_152:11708..21756+ (Clytia hemisphaerica)
AATTCAGAACCAAATATGATCAGTAAGAAACATTGGGGAGAGTTAGAAGA
TAGTGAGGAATTTGTTGAAAAGAAGGATGCAAAACCAGATAAGATGCGCT
CTACAAGTTTCCATAATTTTGAACTTCCACCACTCTATCAACCTGTCTGT
CATCAGAAATCAAATAAGAAAGAGTCCCTAAAACGAAGTTGGATGAAAGG
GCCTCTGGACAGTAAAGGTCAAAGCTACCTCTTACATGCGATCGAACTTC
AACATTACAAACGACGCATGAAATACATGTTGGCTGCTGCCCAATCACAT
CAAGCTGAAGTTCAGAGGGGGAATGTTCCAGAAGTTCAAATGTTACCAAC
ACCTCCACAAGCACCAAAACGATTCTGTTCAAACGAAGGGAAATTGGTCT
CCCAAACAAAACCCTCCTTTCTAGGTGTAGAGTATTCAGCCAGTAGCAGT
AAGAAACGTAGCAACGAATACAAACATTTTCACAACCCATTGGTGTTAGA
TGCTCTTGCTGTTCGCCAGTTGATGATGAAAGCAGTGGCTGCCATCTGCT
CACATACTGGATTCGAAAATAAACGTTTTCCCTTCACAGCTGCCAATGAG
ACAACCTTGCAAACACTGACGGACATCGCCATTGAATATTGTTGCAAGTT
TTGTTGCAAGTTAAAAACATACTATGATCACCAGCCGAAAGGAGAAACCT
CCATCGATGGATTTGTTCACGTGTTACAACAAGTCAGTTGTGAGGGTTTG
GATTCACTGCAAGATTACTGGATCACTCGTATCAAAAATGTTGCCTTGAA
ACTGGAAAAAGAAGATAAACAACTTCTTGATGATTACAATGCACTTAAGG
ATTCCACGAGTCAGCAAGTGACAATCAAAGAAGAAAAACCGTAAAATTCA
GAACCAAATATGATCAGTAAGAAACATTGGGGAGAGTTAGAAGATAGTGA
GGAATTTGTTGAAAAGAAGGATGCAAAACCAGATAAGATGCGCTCTACAA
GTTTCCATAATTTTGAACTTCCACCACTCTATCAACCTGTCTGTCATCAG
AAATCAAATAAGAAAGAGTCCCTAAAACGAAGTTGGATGAAAGGGCCTCT
GGACAGTAAAGGTCAAAGCTACCTCTTACATGCGATCGAACTTCAACATT
ACAAACGACGCATGAAATACATGTTGGCTGCTGCCCAATCACATCAAGCT
GAAGTTCAGAGGGGGAATGTTCCAGAAGTTCAAATGTTACCAACACCTCC
ACAAGCACCAAAACGATTCTGTTCAAACGAAGGGAAATTGGTCTCCCAAA
CAAAACCCTCCTTTCTAGGTGTAGAGTATTCAGCCAGTAGCAGTAAGAAA
CGTAGCAACGAATACAAACATTTTCACAACCCATTGGTGTTAGATGCTCT
TGCTGTTCGCCAGTTGATGATGAAAGCAGTGGCTGCCATCTGCTCACATA
CTGGATTCGAAAATAAACGTTTTCCCTTCACAGCTGCCAATGAGACAACC
TTGCAAACACTGACGGACATCGCCATTGAATATTGTTGCAAGTTTTGTTG
CAAGTTAAAAACATACTATGATCACCAGCCGAAAGGAGAAACCTCCATCG
ATGGATTTGTTCACGTGTTACAACAAGTCAGTTGTGAGGGTTTGGATTCA
CTGCAAGATTACTGGATCACTCGTATCAAAAATGTTGCCTTGAAACTGGA
AAAAGAAGATAAACAACTTCTTGATGATTACAATGCACTTAAGGATTCCA
CGAGTCAGCAAGTGACAATCAAAGAAGAAAAACCGTAAAATTCAGAACCA
AATATGATCAGTAAGAAACATTGGGGAGAGTTAGAAGATAGTGAGGAATT
TGTTGAAAAGAAGGATGCAAAACCAGATAAGATGCGCTCTACAAGTTTCC
ATAATTTTGAACTTCCACCACTCTATCAACCTGTCTGTCATCAGAAATCA
AATAAGAAAGAGTCCCTAAAACGAAGTTGGATGAAAGGGCCTCTGGACAG
TAAAGGTCAAAGCTACCTCTTACATGCGATCGAACTTCAACATTACAAAC
GACGCATGAAATACATGTTGGCTGCTGCCCAATCACATCAAGCTGAAGTT
CAGAGGGGGAATGTTCCAGAAGTTCAAATGTTACCAACACCTCCACAAGC
ACCAAAACGATTCTGTTCAAACGAAGGGAAATTGGTCTCCCAAACAAAAC
CCTCCTTTCTAGGTGTAGAGTATTCAGCCAGTAGCAGTAAGAAACGTAGC
AACGAATACAAACATTTTCACAACCCATTGGTGTTAGATGCTCTTGCTGT
TCGCCAGTTGATGATGAAAGCAGTGGCTGCCATCTGCTCACATACTGGAT
TCGAAAATAAACGTTTTCCCTTCACAGCTGCCAATGAGACAACCTTGCAA
ACACTGACGGACATCGCCATTGAATATTGTTGCAAGTTTTGTTGCAAGTT
AAAAACATACTATGATCACCAGCCGAAAGGAGAAACCTCCATCGATGGAT
TTGTTCACGTGTTACAACAAGTCAGTTGTGAGGGTTTGGATTCACTGCAA
GATTACTGGATCACTCGTATCAAAAATGTTGCCTTGAAACTGGAAAAAGA
AGATAAACAACTTCTTGATGATTACAATGCACTTAAGGATTCCACGAGTC
AGCAAGTGACAATCAAAGAAGAAAAACCGTAAAATTCAGAACCAAATATG
ATCAGTAAGAAACATTGGGGAGAGTTAGAAGATAGTGAGGAATTTGTTGA
AAAGAAGGATGCAAAACCAGATAAGATGCGCTCTACAAGTTTCCATAATT
TTGAACTTCCACCACTCTATCAACCTGTCTGTCATCAGAAATCAAATAAG
AAAGAGTCCCTAAAACGAAGTTGGATGAAAGGGCCTCTGGACAGTAAAGG
TCAAAGCTACCTCTTACATGCGATCGAACTTCAACATTACAAACGACGCA
TGAAATACATGTTGGCTGCTGCCCAATCACATCAAGCTGAAGTTCAGAGG
GGGAATGTTCCAGAAGTTCAAATGTTACCAACACCTCCACAAGCACCAAA
ACGATTCTGTTCAAACGAAGGGAAATTGGTCTCCCAAACAAAACCCTCCT
TTCTAGGTGTAGAGTATTCAGCCAGTAGCAGTAAGAAACGTAGCAACGAA
TACAAACATTTTCACAACCCATTGGTGTTAGATGCTCTTGCTGTTCGCCA
GTTGATGATGAAAGCAGTGGCTGCCATCTGCTCACATACTGGATTCGAAA
ATAAACGTTTTCCCTTCACAGCTGCCAATGAGACAACCTTGCAAACACTG
ACGGACATCGCCATTGAATATTGTTGCAAGTTTTGTTGCAAGTTAAAAAC
ATACTATGATCACCAGCCGAAAGGAGAAACCTCCATCGATGGATTTGTTC
ACGTGTTACAACAAGTCAGTTGTGAGGGTTTGGATTCACTGCAAGATTAC
TGGATCACTCGTATCAAAAATGTTGCCTTGAAACTGGAAAAAGAAGATAA
ACAACTTCTTGATGATTACAATGCACTTAAGGATTCCACGAGTCAGCAAG
TGACAATCAAAGAAGAAAAACCGTAAAATTCAGAACCAAATATGATCAGT
AAGAAACATTGGGGAGAGTTAGAAGATAGTGAGGAATTTGTTGAAAAGAA
GGATGCAAAACCAGATAAGATGCGCTCTACAAGTTTCCATAATTTTGAAC
TTCCACCACTCTATCAACCTGTCTGTCATCAGAAATCAAATAAGAAAGAG
TCCCTAAAACGAAGTTGGATGAAAGGGCCTCTGGACAGTAAAGGTCAAAG
CTACCTCTTACATGCGATCGAACTTCAACATTACAAACGACGCATGAAAT
ACATGTTGGCTGCTGCCCAATCACATCAAGCTGAAGTTCAGAGGGGGAAT
GTTCCAGAAGTTCAAATGTTACCAACACCTCCACAAGCACCAAAACGATT
CTGTTCAAACGAAGGGAAATTGGTCTCCCAAACAAAACCCTCCTTTCTAG
GTGTAGAGTATTCAGCCAGTAGCAGTAAGAAACGTAGCAACGAATACAAA
CATTTTCACAACCCATTGGTGTTAGATGCTCTTGCTGTTCGCCAGTTGAT
GATGAAAGCAGTGGCTGCCATCTGCTCACATACTGGATTCGAAAATAAAC
GTTTTCCCTTCACAGCTGCCAATGAGACAACCTTGCAAACACTGACGGAC
ATCGCCATTGAATATTGTTGCAAGTTTTGTTGCAAGTTAAAAACATACTA
TGATCACCAGCCGAAAGGAGAAACCTCCATCGATGGATTTGTTCACGTGT
TACAACAAGTCAGTTGTGAGGGTTTGGATTCACTGCAAGATTACTGGATC
ACTCGTATCAAAAATGTTGCCTTGAAACTGGAAAAAGAAGATAAACAACT
TCTTGATGATTACAATGCACTTAAGGATTCCACGAGTCAGCAAGTGACAA
TCAAAGAAGAAAAACCGTAAAATTCAGAACCAAATATGATCAGTAAGAAA
CATTGGGGAGAGTTAGAAGATAGTGAGGAATTTGTTGAAAAGAAGGATGC
AAAACCAGATAAGATGCGCTCTACAAGTTTCCATAATTTTGAACTTCCAC
CACTCTATCAACCTGTCTGTCATCAGAAATCAAATAAGAAAGAGTCCCTA
AAACGAAGTTGGATGAAAGGGCCTCTGGACAGTAAAGGTCAAAGCTACCT
CTTACATGCGATCGAACTTCAACATTACAAACGACGCATGAAATACATGT
TGGCTGCTGCCCAATCACATCAAGCTGAAGTTCAGAGGGGGAATGTTCCA
GAAGTTCAAATGTTACCAACACCTCCACAAGCACCAAAACGATTCTGTTC
AAACGAAGGGAAATTGGTCTCCCAAACAAAACCCTCCTTTCTAGGTGTAG
AGTATTCAGCCAGTAGCAGTAAGAAACGTAGCAACGAATACAAACATTTT
CACAACCCATTGGTGTTAGATGCTCTTGCTGTTCGCCAGTTGATGATGAA
AGCAGTGGCTGCCATCTGCTCACATACTGGATTCGAAAATAAACGTTTTC
CCTTCACAGCTGCCAATGAGACAACCTTGCAAACACTGACGGACATCGCC
ATTGAATATTGTTGCAAGTTTTGTTGCAAGTTAAAAACATACTATGATCA
CCAGCCGAAAGGAGAAACCTCCATCGATGGATTTGTTCACGTGTTACAAC
AAGTCAGTTGTGAGGGTTTGGATTCACTGCAAGATTACTGGATCACTCGT
ATCAAAAATGTTGCCTTGAAACTGGAAAAAGAAGATAAACAACTTCTTGA
TGATTACAATGCACTTAAGGATTCCACGAGTCAGCAAGTGACAATCAAAG
AAGAAAAACCGTAAAATTCAGAACCAAATATGATCAGTAAGAAACATTGG
GGAGAGTTAGAAGATAGTGAGGAATTTGTTGAAAAGAAGGATGCAAAACC
AGATAAGATGCGCTCTACAAGTTTCCATAATTTTGAACTTCCACCACTCT
ATCAACCTGTCTGTCATCAGAAATCAAATAAGAAAGAGTCCCTAAAACGA
AGTTGGATGAAAGGGCCTCTGGACAGTAAAGGTCAAAGCTACCTCTTACA
TGCGATCGAACTTCAACATTACAAACGACGCATGAAATACATGTTGGCTG
CTGCCCAATCACATCAAGCTGAAGTTCAGAGGGGGAATGTTCCAGAAGTT
CAAATGTTACCAACACCTCCACAAGCACCAAAACGATTCTGTTCAAACGA
AGGGAAATTGGTCTCCCAAACAAAACCCTCCTTTCTAGGTGTAGAGTATT
CAGCCAGTAGCAGTAAGAAACGTAGCAACGAATACAAACATTTTCACAAC
CCATTGGTGTTAGATGCTCTTGCTGTTCGCCAGTTGATGATGAAAGCAGT
GGCTGCCATCTGCTCACATACTGGATTCGAAAATAAACGTTTTCCCTTCA
CAGCTGCCAATGAGACAACCTTGCAAACACTGACGGACATCGCCATTGAA
TATTGTTGCAAGTTTTGTTGCAAGTTAAAAACATACTATGATCACCAGCC
GAAAGGAGAAACCTCCATCGATGGATTTGTTCACGTGTTACAACAAGTCA
GTTGTGAGGGTTTGGATTCACTGCAAGATTACTGGATCACTCGTATCAAA
AATGTTGCCTTGAAACTGGAAAAAGAAGATAAACAACTTCTTGATGATTA
CAATGCACTTAAGGATTCCACGAGTCAGCAAGTGACAATCAAAGAAGAAA
AACCGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031208XLOC_031208Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049104-proteinTCONS_00049104-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049104-exon-scaffold_152-1491911889:11708..11881TCONS_00049104-exon-scaffold_152-1491911889:11708..11881Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1510915933:11708..11881TCONS_00049104-exon-scaffold_152-1510915933:11708..11881Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1575043694:11708..11881TCONS_00049104-exon-scaffold_152-1575043694:11708..11881Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1491911889:12372..12513TCONS_00049104-exon-scaffold_152-1491911889:12372..12513Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1510915933:12372..12513TCONS_00049104-exon-scaffold_152-1510915933:12372..12513Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1575043694:12372..12513TCONS_00049104-exon-scaffold_152-1575043694:12372..12513Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1491911889:18882..18990TCONS_00049104-exon-scaffold_152-1491911889:18882..18990Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1510915933:18882..18990TCONS_00049104-exon-scaffold_152-1510915933:18882..18990Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1575043694:18882..18990TCONS_00049104-exon-scaffold_152-1575043694:18882..18990Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1491911889:19426..19569TCONS_00049104-exon-scaffold_152-1491911889:19426..19569Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1510915933:19426..19569TCONS_00049104-exon-scaffold_152-1510915933:19426..19569Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1575043694:19426..19569TCONS_00049104-exon-scaffold_152-1575043694:19426..19569Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1491911889:19946..20082TCONS_00049104-exon-scaffold_152-1491911889:19946..20082Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1510915933:19946..20082TCONS_00049104-exon-scaffold_152-1510915933:19946..20082Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1575043694:19946..20082TCONS_00049104-exon-scaffold_152-1575043694:19946..20082Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1491911889:20595..20738TCONS_00049104-exon-scaffold_152-1491911889:20595..20738Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1510915933:20595..20738TCONS_00049104-exon-scaffold_152-1510915933:20595..20738Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1575043694:20595..20738TCONS_00049104-exon-scaffold_152-1575043694:20595..20738Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1491911889:21435..21756TCONS_00049104-exon-scaffold_152-1491911889:21435..21756Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1510915933:21435..21756TCONS_00049104-exon-scaffold_152-1510915933:21435..21756Clytia hemisphaericaexon
TCONS_00049104-exon-scaffold_152-1575043694:21435..21756TCONS_00049104-exon-scaffold_152-1575043694:21435..21756Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_152supercontigscaffold_152:11708..21756 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.69317	3.33338	3.33579	1.84234	3.02414	3.41442	1.31775	2.34774	3.5203	1.91588	5.56834	2.31916	1.99164	3.97172	0.581253	2.99547	5.25148	2.95797	3.22596	1.67196	1.21	0.896005	4.05709	5.75652	3.74456	4.12736	2.30274	1.69305	1.03443	0.356198
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006565BTP
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049104 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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