TCONS_00049103 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049103
Unique NameTCONS_00049103
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1338

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049103 ID=TCONS_00049103|Name=TCONS_00049103|organism=Clytia hemisphaerica|type=transcript|length=1338bp
AATTAATTCCCGTAAAATCTTAAAATCTTACTGAAAAGCTCAACCGCGAA
ATTTAATCCCTGTGAAAATTAATTCCATTAAAGTAAACCTTTGAAACTGT
ACTGATACCTACCAGCTGAGCCCTTGTTTTGTATAGTAGTGGCTTTTAAA
GCATCTTCACTTTCTTGTTTTTAGACATACTATTTAATAATTCAGAACCA
AATATGATCAGTAAGAAACATTGGGGAGAGTTAGAAGATAGTGAGGAATT
TGTTGAAAAGAAGGATGCAAAACCAGATAAGATGCGCTCTACAAGTTTCC
ATAATTTTGAACTTCCACCACTCTATCAACCTGTCTGTCATCAGAAATCA
AATAAGAAAGAGTCCCTAAAACGAAGTTGGATGAAAGGGCCTCTGGACAG
TAAAGGTCAAAGCTACCTCTTACATGCGATCGAACTTCAACATTACAAAC
GACGCATGAAATACATGTTGGCTGCTGCCCAATCACATCAAGCTGAAGTT
CAGAGGGGGAATGTTCCAGAAGTTCAAATGTTACCAACACCTCCACAAGC
ACCAAAACGATTCTGTTCAAACGAAGGGAAATTGGTCTCCCAAACAAAAC
CCTCCTTTCTAGGTGTAGAGTATTCAGCCAGTAGCAGTAAGAAACGTAGC
AACGAATACAAACATTTTCACAACCCATTGGTGTTAGATGCTCTTGCTGT
TCGCCAGTTGATGATGAAAGCAGTGGCTGCCATCTGCTCACATACTGGAT
TCGAAACTGCCAATGAGACAACCTTGCAAACACTGACGGACATCGCCATT
GAATATTGTTGCAAGTTTTGTTGCAAGTTAAAAACATACTATGATCACCA
GCCGAAAGGAGAAACCTCCATCGATGGATTTGTTCACGTGTTACAACAAG
TCAGTTGTGAGGGTTTGGATTCACTGCAAGATTACTGGATCACTCGTATC
AAAAATGTTGCCTTGAAACTGGAAAAAGAAGATAAACAACTTCTTGATGA
TTACAATGCACTTAAGGATTCCACGAGTCAGCAAGTGACAATCAAAGAAG
AAAAACCGTAACACCACTGAGCTGATGCGTGGAGAAGGAAAAAGGTGGCA
GAATAACGTGTTGCAAAGACCATATACCTGCATTAGTATAACTTTTTGTC
ATCCCCGTACAACATTTGAACATGAAACATGAATactaacaatccaaaag
ttcacGAATAAATGCGAACATTTTGAGATATGAACCAAGCTAGCTGCTCA
TGAAAACTGTTCAACAAAACTCTCCCGAATTTGGTTCCAGCTTCGTTTTT
TAAACTCCAAATTGGCTCTACCGTAGCACTATCCGAAT
Run BLAST on NCBI

transcript from alignment at scaffold_152:11521..21756+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049103 ID=TCONS_00049103|Name=TCONS_00049103|organism=Clytia hemisphaerica|type=transcript|length=10236bp|location=Sequence derived from alignment at scaffold_152:11521..21756+ (Clytia hemisphaerica)
AATTAATTCCCGTAAAATCTTAAAATCTTACTGAAAAGCTCAACCGCGAA
ATTTAATCCCTGTGAAAATTAATTCCATTAAAGTAAACCTTTGAAACTGT
ACTGATACCTACCAGCTGAGCCCTTGTTTTGTATAGTAGTGGCTTTTAAA
GCATCTTCACTTTCTTGTTTTTAGACATACTATTTAATAATTCAGAACCA
AATATGATCAGTAAGAAACATTGGGGAGAGTTAGAAGATAGTGAGGAATT
TGTTGAAAAGAAGGATGCAAAACCAGATAAGATGCGCTCTACAAGTTTCC
ATAATTTTGAACTTCCACCACTCTATCAACCTGTCTGTCATCAGAAATCA
AATAAGAAAGAGTAAGTTGAAGTACTTCTTGGTTGTTTCTATACATATTT
TTGGATTATTTTTTAATTCCCAAACTCTTCTGTCAAGGTCAAGTTTGAAT
TTCAATGCTAAAGGTTTACTACCATTACTGTAACCATTACAAAATGATTA
AAAAATAATAATTTTTTCTGAATTCTTTTCAAAGCAAAGAGGTAATAGGA
AATCTTGTCGACGAATCTTTTTTTACAAGCAGAATATGTACAATGAGAGC
AATTGTTATTAAAAAAAGAATGAATTTGTAAAATAAAATGAAAATTGACC
TTGGAAATGATTTATATATCTATCTATTTTCAGAAGTTTAAAGGATATTC
TTTTTCATGATATAGATAGGAGGCGCTGACAAAAAAGATAAACAAAGAAA
TATGTGTTGTGCTTGTGTTTATTATTGTTTAGATATTCTTGCCTTTGTTT
AAAAAAACTGTGCCATTAAATGATGTATTTCCTATGATTGTTTACTTGTA
GGTCCCTAAAACGAAGTTGGATGAAAGGGCCTCTGGACAGTAAAGGTCAA
AGCTACCTCTTACATGCGATCGAACTTCAACATTACAAACGACGCATGAA
ATACATGTTGGCTGCTGCCCAATCACATCAAGCTGAAGTTCAGGTACAAA
CAAACATTCCCCTATATTCATTAAAATCCctttagtaaaaaaaattcatg
tctTACACcaagaaaaatgttattttgtAGATTAAAAATTTTTCGTTCTT
TGATTATGACACTCActaaaattttttgagaaagtgGCGTGTTGTTGATT
TTATTTCTATGTTGATAAACAAACGGTTACACAACTGGTGCTACTGTGTC
TTAATGCTAAAGcaagttttaaaattgatcCAAAAGTTTAATTAGAGCCA
AGATGTGagtaaaaataaatagaaaaggATCACTTAGCAGAAATTTGGAC
GCTGAGAGCTTCAAAACATCCCACTTTTGTTTCCCTGCCTCATTCATGAA
GCGTTTGAAAAAATTAGGCATTGTGGGTACTTATTTTTCAAACTGAATAT
ATTTTTGCCGTCTTACAAAGAAAACGGAATAGGAAATCACCTGTGTATTC
CGATCGGAATAATAACTAATACTTGCTTAGCCCTAGCGATGATCGGTTCT
AGAAACCCGTTTGGGATTGTTTTACCGAAAACATAGAAGAATCGGATTTA
AACTTTGAAGTCTTGACGACGATCAGTCGAAAAAAATTGTGGAAGGGATC
TAaagggtcaccggggctgaccaaAAATGACAATGACAATTCAAAATAGA
TTTCAAAATAGTAAATGTTTGATTGatgaattaaaaaattatcgattgaa
aagtatataatagataaaagttaaatcaaaactacacgtttttttttttt
aagaaacacacttttaagaaacatgaggcttagaatgcctaaaaactaag
aaacatctaagaaacatgctgaggctgaNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNagaaacatttaaggctcaaaaggctgatttcttaagaaac
attgaggctgcttggtaaaactagtttcttaaaaaaaaaaaacgtgtata
ttcaTCAAGAAAATTGTATATAATACAGCTTCTTAACGTATCATAAAGTG
CTTTTTATTATATGTGGATGTAGGAAAACAAAAAGTATCtaaatgaaata
taaaaaaattacaaaacaaaataatcaaaTCCATAAATCATAGCTTTATG
TAGGAGAACCTCACCACCCTGTTAATTCGAAAAATAGACCCAAAATGTTT
TATAACAATCCTCCAacaattgtaaaaaaaaattgaattgaaaaataaaa
aaattacaaaacaaatTAATCAAATCCTTAAATCATAGTTTTAATTGTAC
CCCCACCACCCTGTAAATTCGAAAATTAGACCCAATTTTTTAGCAGTTCT
CCAAAAATTGTAAATAGCTCCTAAATGTATTATAAGTGCTTATAATATAT
TGTAAGGGGCTTTTTATTATACATGAATGTAGGAAAACAAAAGGTATCta
aatgaaatataaaaaatctacaaaacaaATTAATCAAATCCTTAAATCAT
AGCTTTATGTATGAGGACCCCATCACCCTGTAAATTCGAAAATAGACCCA
ATTTTTAACAATTCATTCAAATTCTCAATTTAAACgataaaaaaaacgaa
aagtaTATCTATCTCAATGAAGGAGGTAACTTTTTAATCGACATTGGAAC
TACTATATTTTTTCCGTCAACTATATCAATCAATCGACTACAAAAGATTC
TAAATTTACAAACGGTACGGTAAATAAATTGACCGTGCATCTCATAATAG
TGTTCAATGCAGTGTATGGtagcttttgatatttttcatctGCTGCTGGA
GGTAGTATAGTAATGACATTATGCCACTCGAAACCATACACAGAGTAATA
TGGGACAATCAAGACTGTCCTAGTACCTCTACGTATTAAAGAATGGTAGG
CTTTCTCTCCTTTCTTTGACAGTAGAGAAGGTTCAAGGAGTGAGCTGACA
CAACTTTCCACTTTATTTCTAACCATTTCCATTAATCTTGTGTCATTGTA
AGGCGGAACAATCAAAAGAATTCCTCCTTTTGTGTTCTTCTGTGCCTTTA
TTAGAGCGTCCTTTAAGTCCGTGCAATGTTGAGGACCATTACCGCAAGGG
GAGTTCGCCAACACTTTTGGTTTGCCGAATATCTTCTCATATTCATCTGT
TATTTCTTTAATACCCGCCTCAGTAATACTTTTACAGTTTCTCAGATTGT
AATCTAAATGAAACGTTTGAAATGAAGATGAATCATTTTTTTGGTTGTGT
TTGTCCAAATCAGGGGCAAGCCAAACccattttttattatttgattCACT
AATAATGTCATTGGGATTGCCTTTGAATTCATCACAAAAAATAGCTGTCA
TTTGATTGCTCGTTGTCATCAAATCGTCTTTGTTAACCTAAAGcataaaa
aaagggttttgtGGTTTAAGTTTGACACATTAGTACACACCTACATTAAA
AGACATTATCTTTTAAAAACAACATTAAAAGTCTAAACCACTATAAGAGT
CCTTAACATCAGACAAAATTCATATTTCAGACAAGCGCCACATATCATTA
TTTGTAAAACCTGTGAGTTTCTATCATACTCAACGAGggagaaatttgaa
gaaaaattaaattccttaCATCTTTGTTCACAAATTCCACTGAGATTCCC
TTTAGACCTTTCTTCTCTGAACGGTATTTTAAATGTTGATGAAATAAGAA
ATGCGTCTCGTCTTGAATTTCGTCCAACTTTTGCTCTGGTGCCATAACCA
AGTATTTGACCTCTATATTCTCTTTGTGTTGCTTCTTCAACTGTTTGGCT
TTTTCTTGAAGCAAGAGACTTTTTCCTGTACCGTGGTGTCCAGAAATGAG
GAGGTTCTGGTACTGAGATTCCATGCAAAATAGATCCAATTGTTGTTTAG
AGTAAAAGATGATATTGCTTTCGTTGGAGACTGCTTCTATTGCGTCGCGA
ATGTAATCAACCCAGTTCGCAGGGGTGATAGGGCGTGATTTTGTATTGTG
AATGGTGTAGATGAAAATTTGAACTATCTTTTTTAACGagtcctaaaaaa
taaaaacatttttttcatttttccattcTCCTTGTCAGTTAGAcaggaca
gacagacagacagacagacagacagacagacagacagacagacagacaga
cagacagacagacagacagacagacagacagacagacagacagacagacc
tTCGAATCTGTAGCTGATCCGTTCATAGATGTGACATTTCCATTCTCGAG
CACCCCCTGTAGCCATGATCTTATATTGGTTGAAGTATTGATGACATTAA
CGTGTTCTTCGTGAAGGTTGAAAGGATCCTTTTTAGAGTGATATCCAAAA
GCTGGAATGAATTTCCAGCCGTCTAAAATATCTCCAAACAAAGTGGTTCT
GTATGATTTCCTTTCTAGTCTTTATCTAATTCACGACACATTTCTTAGCA
TCTAAGATATTTTGCTCCGTTGCGCTTCGCTTTAGCTCCACTGCTACGAG
TTGTTTACACGGNAAGATATTTTGCTCCGTTGTGCTTCGCTTAAGCTCCA
CTGCTACGAGTTGTTTACATGAGTGTGCGAAGATGAGCAAATCAAATTCT
GCTCCTCCAAACCCTTTCGCTTTGATATCAACTGAACGAAGGACAACGCA
ATCTTTTAATAAATCTCTGTTGTCTTTGAGCGCATTGAAAAACCAGTGCT
CAATTTCCTCATCGTCACGTACGTTTTTCACTTTATCTAGCCATTCTATG
ACATTGGCTGGTCCagtcactgaaatttcattttgaaactctTGTTTAAT
GTTTTCTATCCAGGTTTCTAATTGGTTTTGGTTAATGCCATCTGAATGTT
CTTCAAGAAATTTTTGTAGCTCATCTCTGAACCATTGTGGCATTTCTTCA
TTTTCGGCAGTTTCTTTAATGTGATTTACAAAATCATAATCCAATGAGGT
TATCAATTTTCCTTGTGGtatttcaaattcaaagaaGTATTGTATAGTCT
CTTGAATACTCTTTTTCTCAATTTCCTCATCAAGAAGTTCATTCAATCTT
TCCAAATTGTCCATTGTTTCTAAGATTCTTTTCAAGCTGTTTGATAAATC
CTTATTGGAAAATCTTTCGAAGCAAATTCGTACAAATGATTCTGTGCTGT
GGTGTCTCATAGTAAATGGTATCTGAcgcaaatctttgttttcgagCTCT
TCATGTAAAagatatttgattttaactCGCAACATCCAATCCTCAAAATC
ATGATTGTTTATAGCATTCGGTATCGAATCATTATTGTTCGAAAGCTTCT
GTTTTCTTTTCTGTTCTTGAAAAAACGCTTTAAGTTCCTTCTTAAACCAA
TGGTTGTCCGTTAGTTGATCATATTGTGTCTCTATTTCGGACAGCATTTC
CTTATCTTGAATATGGTCAGCAACATGATGCTTTGACACAAAAACAGGTG
GTATGAAAATCGATTCACCTTCTTTCTGGAAAAGAAATGAATCTCCGTAT
TCTCTCTGCAAAAGATGTGCTGCGGCTTCTAAAGGCTTTCTATTGCGCTG
CCCATTTCCAAGTTGAAACTGTCTTTTCTGATTTGTTGTCGGCCCATTTT
GTTCTTCAAATATTTCTCCAATGACTTTTGACATCTTGCTTTATCGATCA
TTTTTTCTTGTAAGGTTTCTCTTAATTTTTGGACGAGTTCCTGTCTCCTG
TCACCATTGCTTTGCTCCTCACTCATCTCTTTAGATTAGTAATGAGTTTG
CCTCCTTCACAAAACGTTTCATGATGGTCTGAGTAATAAATAATTCTTAG
AAAACGGTTAGACGTTTCTCTTATTTGAAAATTCTGTTAACCTTTacgaa
acttttttttatacaGCTCCCCTTTCTTTTAAACCTTTTAGTACAGTTTC
CAAGTGCtgtaattgtttttttgtttttttttgcttgtgtaTTGACTGCT
GTGTAACAGAATACATAGTTcatcttttataagaactttttctTTCAGAT
GATGCTCGTGATCCTTATTTTTTGACTCGACCCTAAGAATATTCTGTAAT
GATTCTTAAATATTCAAGATTGACTCTCCTTCGAAATTTATTCTACTCCC
CATTTACTTTAGAActtatttgatttaaaattaggaagaaattaaattct
tatttaaaaaatgaaatttgtatAAAGATAACGATCTGTTGACCAACACT
TAATTTCCTACAAAATATTATACGATTTTTGCGCTCGCCTTGCAATTGAG
AGATTAATGGGGCTTTTTCTTGTATATCTTATTCTTTatactttatttat
aagaacgaactatataagagcattaagactttgatggccaaaatattaag
aacattttaacttAGCCTTTGCAgattctaaaacacccaatcTCCTAAAA
GATTGCACAAAATTTGGTTAAAAACTCataaagttaagagcatccgaagg
cttccGAAACTTTGGGCGTTCTTGTTACAAAAGCACGTACATTGACTCTT
GACCTCGAAAAATCAAAGGGATATTTTTGCAAGTTTGATTGGAATTTTTT
ACATTGCATAATTTACTATTGCTGTTGAAACTCTCTGGTGAAAAATCTTT
TAAGATAATCTTTGTAattgaatctttctttaattcgaaggGATAATTAT
TTGTCCGTTgcagatcgaattagagagagtcaaatGTAGTATTATACTTG
TTTTTTCTCAGAGGGGGAATGTTCCAGAAGTTCAAATGTTACCAACACCT
CCACAAGCACCAAAACGATTCTGTTCAAACGAAGGGAAATTGGTCTCCCA
AACAAAACCCTCCTTTCTAGGTACAGTATACTATGTGTAATTTTCGAACA
TTAATTTGTTTAACTTTTCGACCATAGTGGGCAAAGTGTCATCTCCACTT
ACATAGGTTTATCTCAGTACATCAAATTGCATTTACATCAAATTGCTCAT
CAACCCAAACCCCAATCTGAATCCAGGGGGAGTTTCCACTATGATGGTTA
TAATCACCTAAACTCTTTCAAGGAAAtaagtttgttttttatctttagcC
CAGTTTTCTCCAGTATTAATTAAAAAAGGGGCCTTCCTGACCAACGTTAA
GAATTTCTGTTCCGGTCAGAGACGAGGCCTTAAATAATATTTTGGTGTAG
TGTATACAATGTATTTTGTAAGCAAACTTTAGGTTGTATTCTGCACATGA
GTAGAAGTATGTATAGTTTATGTCTTCAAAACCACTGATTTTATCACGTC
TCTAGGTGTAGAGTATTCAGCCAGTAGCAGTAAGAAACGTAGCAACGAAT
ACAAACATTTTCACAACCCATTGGTGTTAGATGCTCTTGCTGTTCGCCAG
TTGATGATGAAAGCAGTGGCTGCCATCTGCTCACATACTGGATTCGAAAG
TAAGgcttgtacacgttttttcataagaataaactatataagagNCGACC
CTAAGAATATTCTGTAATGATTCTTAAATATTCAAGATTGACTCTCCTTC
GAAATTTATTCTACTCCCCATTTACTTTAGAActtatttgatttaaaatt
aggaagaaattaaattcttatttaaaaaatgaaatttgtatAAAGATAAC
GATCTGTTGACCAACACTTAATTTCCTACAAAATATTATACGATTTTTGC
GCTCGCCTTGCAATTGAGAGATTAATGGGGCTTTTTNCATCTTAAACCAT
TATCTAGACAGgatcattttaatgacgacacTCTAGTCTGGAGACTTACT
TATTCCACAAAAATCTTGTCAATAGATAAACGTTTTCCCTTCACAGCTGC
CAATGAGACAACCTTGCAAACACTGACGGACATCGCCATTGAATATTGTT
GCAAGTTTTGTTGCAAGTTAAAAACATACTATGATCACCAGCCGAAAGGA
GAAACCTCCATCGTAAGTGATGCTCTGGAAACCTACGATTCTGACGGATA
GAAGCTCATTTCTGAGTATTTTCCAAAGTTCAGTGTCGATATTATATGAT
TGCCAATTCAGCGTCGCAGCTTTCCCGTCTGTACAGACTTTGAGTGTTCA
AGGGTTTGAAGGGATTAAAAGGCTTTCCGTTCAGCAGTCTAGTAtatata
ctagacgtcacctgcgtttttttctacgcaatttgcgtatcaaaacactt
gaaagtcttctatttttcagaaatcgtcaaagtggaactcactaagaaac
gggatGAAAAATTCTGGTTTTTGGTGAGCACCGTTATCCATCCAGCAGTG
AGACAAAAAACTGACCCGTTTTTAGTTCGAGTTTGATTCATCTTATTTTC
AAAGTCAAGTAGTGAATCGATAATATTTTGTAGTTGGTTTAAAGGCTACt
tctatttgtattcttattTCGGAGATGATCATTTCTCGAAAAAGGAATAA
TATTGTCACGTTTTTGTTTCACAGGATGGATTTGTTCACGTGTTACAACA
AGTCAGTTGTGAGGGTTTGGATTCACTGCAAGATTACTGGATCACTCGTA
TCAAAAATGTTGCCTTGAAACTGGAAAAAGAAGATAAACAACTTCTTGAT
GATTACAATGCACTTAAGGTATTTATATTTGTATATTACACTTTCTTCTT
GTTGAGTTGAACTCTCATTCATCAGAAGAGTGCTTGATCGATCGGAATCG
GAAGCATATATATGCTATTGTCGAATGAAATTAAtgtgttttatttcaaa
actaacAGTTTCACACCGTGGAGACGatcatcagttgaaaataaaattta
aaaaaactagaatAGGCGTTCATTCAACTTCATTCGACAATAGTATATAT
TACACTTTGATAATACGAATCGCACACGCCTGATAAACTAGAAGTATTTG
GAAGCACGAGAGGATGCCAGTAGCGTAACACCCTTCACGCATGACATACC
ttgttttcattgtttttttttacaaaattaaacACTACACTGCTGAGGTG
ATAGGATATTGCTGAAACGACATTCAATAAAATATACAGGAGTTATACTT
ATACAGAAGTTACATACTTGGCACGTTTTAACTTGGCAGCtaagtaaata
aggaactcgataaggaactttgaggctgaaactcTCTggaaaaaataagg
aactccaggctcaaattaaggttccttataaaaaaacgcgtagCACACAT
CGTCgttaaaaatcaagttttgctTGTGTTTCTGGTGTTTGTGTTAAGTA
GCCATTATTCTGAAATACAAAGTCCAATGGAAATTTACAATTCGATCTGC
TTTACTCTATACAGGATTCCACGAGTCAGCAAGTGACAATCAAAGAAGAA
AAACCGTAACACCACTGAGCTGATGCGTGGAGAAGGAAAAAGGTGGCAGA
ATAACGTGTTGCAAAGACCATATACCTGCATTAGTATAACTTTTTGTCAT
CCCCGTACAACATTTGAACATGAAACATGAATactaacaatccaaaagtt
cacGAATAAATGCGAACATTTTGAGATATGAACCAAGCTAGCTGCTCATG
AAAACTGTTCAACAAAACTCTCCCGAATTTGGTTCCAGCTTCGTTTTTTA
AACTCCAAATTGGCTCTACCGTAGCACTATCCGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031208XLOC_031208Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049103-exon-scaffold_152-1491911889:11521..11881TCONS_00049103-exon-scaffold_152-1491911889:11521..11881Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1510915933:11521..11881TCONS_00049103-exon-scaffold_152-1510915933:11521..11881Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1575043694:11521..11881TCONS_00049103-exon-scaffold_152-1575043694:11521..11881Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1491911889:12372..12513TCONS_00049103-exon-scaffold_152-1491911889:12372..12513Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1510915933:12372..12513TCONS_00049103-exon-scaffold_152-1510915933:12372..12513Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1575043694:12372..12513TCONS_00049103-exon-scaffold_152-1575043694:12372..12513Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1491911889:18882..18990TCONS_00049103-exon-scaffold_152-1491911889:18882..18990Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1510915933:18882..18990TCONS_00049103-exon-scaffold_152-1510915933:18882..18990Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1575043694:18882..18990TCONS_00049103-exon-scaffold_152-1575043694:18882..18990Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1491911889:19426..19569TCONS_00049103-exon-scaffold_152-1491911889:19426..19569Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1510915933:19426..19569TCONS_00049103-exon-scaffold_152-1510915933:19426..19569Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1575043694:19426..19569TCONS_00049103-exon-scaffold_152-1575043694:19426..19569Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1491911889:19967..20082TCONS_00049103-exon-scaffold_152-1491911889:19967..20082Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1510915933:19967..20082TCONS_00049103-exon-scaffold_152-1510915933:19967..20082Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1575043694:19967..20082TCONS_00049103-exon-scaffold_152-1575043694:19967..20082Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1491911889:20595..20738TCONS_00049103-exon-scaffold_152-1491911889:20595..20738Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1510915933:20595..20738TCONS_00049103-exon-scaffold_152-1510915933:20595..20738Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1575043694:20595..20738TCONS_00049103-exon-scaffold_152-1575043694:20595..20738Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1491911889:21435..21756TCONS_00049103-exon-scaffold_152-1491911889:21435..21756Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1510915933:21435..21756TCONS_00049103-exon-scaffold_152-1510915933:21435..21756Clytia hemisphaericaexon
TCONS_00049103-exon-scaffold_152-1575043694:21435..21756TCONS_00049103-exon-scaffold_152-1575043694:21435..21756Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_152supercontigscaffold_152:11521..21756 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.536	13.1526	6.04966	4.52019	10.3455	6.83231	10.471	11.5757	5.39159	7.4187	3.87815	5.45135	5.97118	4.5342	6.12419	5.39177	8.16485	6.90672	4.99819	3.88709	5.16595	7.46058	12.681	9.4373	5.71301	7.07853	3.80971	2.74055	7.13966	9.18413
Blast
[Close]
BLAST of TCONS_00049103 vs. Swiss-Prot (Human)
Match: ST65G (STAGA complex 65 subunit gamma OS=Homo sapiens GN=SUPT7L PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.021e-17
Identity = 78/257 (30.35%), Postives = 120/257 (46.69%), Query Frame = 3 
Query:  204 MISKKHWGELEDSEEFVEKK--DAKPDKMRSTSFHNFELPPLYQPVCHQKSNKKESLKRSWMKGPLDSKGQSYLLHAIELQHYKRRMKYMLAAAQSHQAEVQRG-NVPEVQMLPTPPQAPKRFCSNEGKLVSQTKPSFLGVEYSASSSKKRSNEYKHFHNPLV-LDALAVRQLMMKAVAAICSHTGFETANETTLQTLTDIAIEYCCKFCCKLKTYYDHQPK-GETSI-DGFVHVLQQVSCEGLDSLQDYWITRIKN 956
            M  +++WGE+  S     +   D  P + R    H+   PPL+QP     +NK    K   M   + S+  S  +H I+L  + RR++ ++A AQ+   +   G    E + LP+ P +P                 F         S   S+ Y+    P+  L   + RQL+ +AVA I +H GF+ ANE+ L+TLTD+A EYC KF   L+   D + + G+T   D    V  +V    + SLQ +W  RIK+
Sbjct:    1 MNLQRYWGEIPISSSQTNRSSFDLLPREFRLVEVHD---PPLHQP----SANKP---KPPTMLD-IPSEPCSLTIHTIQLIQHNRRLRNLIATAQAQNQQQTEGVKTEESEPLPSCPGSPPLPDDLLPLDCKNPNAPF-----QIRHSDPESDFYRGKGEPVTELSWHSCRQLLYQAVATILAHAGFDCANESVLETLTDVAHEYCLKFTKLLRFAVDREARLGQTPFPDVMEQVFHEVGIGSVLSLQKFWQHRIKD 241
The following BLAST results are available for this feature:
BLAST of TCONS_00049103 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ST65G7.021e-1730.35STAGA complex 65 subunit gamma OS=Homo sapiens GN=... [more]
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