TCONS_00049015 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049015
Unique NameTCONS_00049015
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2139

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049015 ID=TCONS_00049015|Name=TCONS_00049015|organism=Clytia hemisphaerica|type=transcript|length=2139bp
ttttagttctcaaaaaatattttaagaacatggGTGCATACTTACCAAAA
CCAGTTACAGAGAAAACATCTCATGATGAATCCTTGGATCATCTTTCCTT
TGGTATCTCTGGCATGCAAGGATGGAGAGAGAATATGGAGgATGCCCATT
GTGCTATGCCAGATTTTGATGGAAAGAATAATGCATTATTTGGCGTATTC
GATGGACATGGAGgtgAAGAAGTGGCAGTTTACGTATCCCAGAATTTACA
TAAGTTCATCTTAGACTGTGACAGTTACATGGAAGGCGAAATTGAATCAG
CTTTGAAAGAAGCCTTTATGAATATTGATCAAGCAGTTATAACAGAGGAG
GTTATTGAAGAGTTGAAAGAAATAGCTGGTTTCAATGAAGGAAATGAAGA
AGAGAGAGCTGGAGAACTGAATGCTCTTTTAGAAGAAGCACACATGCCCA
TTGAAGACATTCTTGCCAATATCCAACAAAAATGCCAAGAAAGGCTTTCT
GTAAAAGGTGTTTTTAAAGATGAAGAGGAATCTGAAGATGAAGAGGAGGA
TGAAGAAAAACCCAAAACTGAAAATGTTgttgatgaaaataagaatgtCA
ATGGACACACAGaGGTGCCAAAGGAGACTGGGAAGAAGTCAAGGAAACAA
AAGGCACCAACAAAGAGagttgaaaatggTAACACTGAGATAGTGGCAAT
AAACGGGTCAGCTGAAAAAGTAAAAGAGGAAGGTGGATCAAGTGGCGGCT
CCTCATCTACGCCATCAGCAGAAGAAGCAGCTTCGGCTGATGGTTCTAAC
AGTGTTTGTGGCTCCGGTGGATCGTCTACCGCTGAAGAATCAGCTGGTCG
TTCATCTGGTGGATCTGGCAGCTCCAGTGGTGGTTCATCAGGGGGATCAT
CAAAGGCACCATACATCCCTCCTGTCAACCCAGCTGGTGGTGAGGACGAc
gatgaagatgatgatgacCCAGATTTTGATTCACCACCAGAAGATAGTGA
CGAAGCTGAATCTTCAGGCGATGATGATGAGGATGTTTCTGGTGAATCTG
GCGAAGAGGATGATGATGAAGATCAGTTTCAAGATTCAGAAGGTTACGAA
TTCTCTCAAGGACAAGAGGTTGGTAAAGATAGCGGGACAACAGCCGTGGT
AGCTTTGATACACAATAAACAGCTATACGTAGCCAACGCTGGCGATTCTC
GGTGCATTTTGTGTAGAAATGGCAAAGTGGTTGAAATGTCTAAAGATCAT
AGCCCTGATGTTGAGGAAGAGCGGAAACGAATCGAAGCAGCCGGCAGTAA
AATTTGCTCTGAAGGTCGTATCAATGGTGGTATTAACCTAACGCGAGCCG
TCGGTGACCACGCGtacaaacaaaataaagatTTGCCACCTGAAGAACAA
GCGGTCACAGCGTTACCGGACGTTCGTGTACAAGACCTTACTGACGAAGA
TGAATTCATGGTACTGGCGTGCGATGGTATATGGAATGTGATGACGAATG
ATGAAGTATTAGATTTTGTGCGCGACCGAATCACTGCAAACGAAAAAGCT
GATGAAAAACTCAAATTATCCCAAATTTGTGAAGAGATGTTCGACCACTG
TTTGGCACCGGACACACAAAATGATGGTACTGGGTGTGACAATATGACGT
GCATGATCATtcaattcaaaaagaaattccTTCAAAACGGACATTCTACT
GCGCCAAATAAACGAGAACTTTCTCCTTCTGCTGATGAAGAGTCTAAACA
GAAGTCTAAAAAATCCAAATTGAGCTGAAGCTAATGAATGGCTGTAGTAT
AGCTTTAGTCTATTTACAGTGTTCTAACCTCGGAAATCTCCTCGTCGAGA
GTTTACAAGGCTTACCGCGGAAGACTTCGGTTATTTGGTTTTTGAGCTTT
ATAATGGTTTCAATGGCTATTGGagatgttaatttttttaagtttggttC
CAAAACGAGTCAATTCTGGTAAACCATTTATCATATTTGACGGAACGGCA
ATCagtgaaaaatttgcttttaaaattttcggatgatattttttatttgt
cagagtttattattaaaaaagagGTGTATTTATGACGAGAAAAATCTTTC
GTGgcaatttttgcgtttttaaaAACTGAATGTTTActt
Run BLAST on NCBI

transcript from alignment at scaffold_15:204406..214165-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049015 ID=TCONS_00049015|Name=TCONS_00049015|organism=Clytia hemisphaerica|type=transcript|length=9760bp|location=Sequence derived from alignment at scaffold_15:204406..214165- (Clytia hemisphaerica)
TTTTAGTTCTCAAAAAATATTTTAAGAACATGGGTGCATACTTACCAAAA
CCAGTTACAGAGAAAACATCTCATGATGAATCCTTGGATCATCTTTCCTT
TGGTATCTCTGGCATGCAAGGATGGAGAGAGAATATGGAGGTGAGCACAA
CAGTTATTAATTTTGTAAAAATAAAAGTTCAATTTTGAAATGAAAAAATA
AAAATGAATTTTAAAGCAGGAATAATAGATTGAGAAACCTGGTAAAAGAA
ATATTTCTGGGTATGAAATTTTGTAGAGGGCAATATTATACCTTTATTGA
TAAGAGTTGGATATATTTTTAGTTAGTCAGATTTAGTTTGGTTTTCAGTA
AATGCAAAATTAATGTGTTTTTTTCTATTTCTTTTTTAAGGATGCCCATT
GTGCTATGCCAGATTTTGATGGAAAGAATAATGCATTATTTGGCGTATTC
GATGGACATGGAGGTGAGAAATTTTAAATATTATCAATAAATTCTTTTGT
TTAAAAAATCAGCAGAACTTTTAACCGGTTTAAAGCTATCCAATTAGCCC
TATTGAAACATTTAATTTTCAATTTTTAGGTGAAGAAGTGGCAGTTTACG
TATCCCAGAATTTACATAAGTTCATCTTAGACTGTGACAGTTACATGGAA
GGCGAAATTGAATCAGCTTTGAAAGAAGCCTTTATGAATATTGATCAAGC
AGTTATAACAGAGGAGGTTTGAAATAATGGTTTTATGATCCAAAATATTT
TTAAAGATGATATTTTGGGGTAATAGGAACCTGCTGAAAGAGGGACACCT
CCATGCTGAGTCAAATAGATAAAAGCTACTTTTATGCAACGTTATGTTGA
TGCAAAATAATACGCATACTAACAGATACTAATGCCCGGCTAGTGCACAT
GCATGAGCGTTTCTGAATTATTGCTAATGCAGTATTGTTCAATCAAAAAA
AAAAGCTTCAACTTGTTATATGTTTTAAAATCTGTTTCCCGAAAAATATT
TTCCACCCAGTGTTACCAAAAGAGTAGACGCAATAAAGCAGGAAAATATA
TAATGAATTGGAAGGAAACAGAGAATGAAACAGAGCAACCTCTGTTGGAA
TGATGTGCCGAATCCTATTGATTGGTTGGATAGATATTTTATATATATTT
TTACCCCTTAGTAATTGTATTCCTTCAGGTTATTGAAGAGTTGAAAGAAA
TAGCTGGTTTCAATGAAGGAAATGAAGAAGAGAGAGCTGGAGAACTGAAT
GCTCTTTTAGAAGAAGCACACATGCCCATTGAAGACATTCTTGCCAATAT
CCAAGTAAGTCACTGCTTCGACTTCGAGATATTCAACTAAACCAAGAGAG
GTATTTTTCTTTTTGTTACAAATTTAAAGTGACATTTTGTTCATTGCAAG
TCTCTAACAAATTTCACTCCAAATATCAATATTGGTTGTNGATAAGAGTT
GGATATATTTTTAGTTAGTCAGATTTAGTTTGGTTTTCAGTAAATGCAAA
ATTAATGTGTTTTTTTCTATTTCTTTTTTAAGGATGCCCATTGTGCTATG
CCAGATTTTGATGGAAAGAATAATGCATTATTTGGCGTATTCGATGGACA
TGGAGGTGAGAAATTTTAAATATTATCAATATATTTTTTTGTTTAAAAAG
TCAGCAGAATTTTTAACCGGTTTAAAGCTATCCAATTAGCTCTACTGAAA
CATTTAATTTTCAATCTTTAGGTGAAGAAGTGGCAGTTTACGTATCCCAG
AATTTACATAAGTTCATCTTAGACTGTGACAGTTACATGGAAGGCAAAAT
TGAATCAGCTTTGAAAGAAGCCTTTATGAATATTGATCAAGCAGTTATAA
CAGAGGAGGTTTGAAATGATGGTTTTATGATCCAAAATACTTTTAAAGAT
AATATTTTGGGGTAATAGGAACCTGCTGAAAGAGGGACACCTCCATGCTG
AGTCAAATAGATAAAAGCTACTTTTATGCAACGTTATGTTGATGCAAAAT
AATACGCATACTAACAGATACTAATGCCCGGCTAGTGCACATGCATGAGC
GTTTCTGAATTATTGCTAATGCAGTATTGTTCAATCAAAAAAAAAAGCTT
CAACTTGTTATATGTTTTAAAATCTGTTTCCCGAAAAATATTTTCCACCC
AGTGTTACCAAAAGAGTAGACGCAATAAAGCAGGAAAATATATAATGAAT
TGGAAGGAAACAGAGAATGAAACAGAGCAACCTCTGTTGGAATGATGTGC
CGAATCCTATTGATTGGTTGGATAGATATTTTATATATATTTTTACCCCT
TAGTAATTGTATTCCTTCAGGTTATTGAAGAGTTGAAAGAAATAGCTGGT
TTCAATGAAGGAAATGAAGAAGAGAGAGCTGGAGAACTGAATGCTCTTTT
AGAAGAAGCACACATGCCCATTGAAGACATTCTTGCCAATATCCAAGTAA
GTCACTGCTTCGACTTCGAGATATTCAACTAAACCAAGAGAGGTATTTTT
CTTTTTGTTACAAATTTAAAGTGACATTTTGTTCATTGCAAGTCTCTAAC
AAATTTCACTCCAAATATCAATATTGGTTGTTTTCCCTGACTGTGTTGTG
TTATTCTCAACTTCAGTGAACTAGGATTTAACCTATAAGCTTTGTATCTT
TTTCTTCAGCAAAAATGCCAAGAAAGGCTTTCTGTAAAAGGTGTTTTTAA
AGATGAAGAGGAATCTGAAGATGAAGAGGAGGATGAAGAAAAACCCAAAA
CTGAAAATGTTGTTGATGAAAATAAGAATGTCAATGGACACACAGGTAAT
GTAATGTTCATCTAAAAAAAATATTTAGGTGATGGTTAAAAGAAAGTTAA
ATATTCCGTACAGACATTTTTGAATAAAATATCTTGCTTGGTATTAACAT
AAATCACTGCCGTTTTCTAGCTGACCTGAGTAAAACTTATACCTAAGGGT
GTTGGGCTAAAGCTTCATTAACCTGACTTGACTATAATGAGACTGGCACT
TTGAAAAGGAGTAAATTTAATTGTTTTTGATTCAGACAGTTTTCTAAATC
ATATAACCTACTCGATTTGAATTATATATATTTTAGAGGTGCCAAAGGAG
ACTGGGAAGAAGTCAAGGAAACAAAAGGCACCAACAAAGAGGTAAAACTT
ACTCTATTTTTCATCGATTAGTCAATCGACGGTTGAAGAATCCCCCTTAC
AATTGTTAATATAAAGATGAGTCTTCGAAGGACTCCATGTCCATGCAACA
TATTGTCAAATTACACTCATGTCTCGTTTTTTGTTTGTATTGAGAAAAAA
ACCATCACCAGACATATTATTTTGTTTATTTGTAATTTGGCATTTTGTCT
GGCATTGATAAGTAATATAAGATTTTACGAAACACATTTGTAATTTAAAG
GGCTTTGTAATTTAAACAACTAAATCCATAGTTCGAACCCCCCCCCCCCT
TCTTAAGGGGGTGGCACCTTCCGAAAAAATGAAGAATGGGGATCAGAAAA
GAGGAGGCATCGTTTAAGAAGGGGGGCTTCCATATATATTTTAGAATATT
TTCAAGCACTGTTATGAAATTTGGTCTACGTTAAAGTCTGACTCAAAAAA
AGAAAGAAGTTTGTTGTTTCTCTTTCTCTATCTAAAGATATTTTCTTAGA
AAGGGGTAGCAGCGAGAAGGGGATTATTATCGGATCCCACTATACACTAT
ATATTTTCGAAAATGTAGCCCAAAACCCTCGGGGGATAGGCATTTCTAAA
GGTTGGGGATGTCATGAAGGGGGATCAGACCCCTTTTCGCACTATGTTAA
ATCTGTTTTGTTCATTTTAGAGTTGAAAATGGTAACACTGAGATAGTGGC
AATAAACGGGTCAGCTGAAAAAGTAAAAGAGGAAGGTGGATCAAGTGGCG
GCTCCTCATCTACGCCATCAGCAGAAGAAGCAGCTTCGGCTGATGGTTCT
AACAGTGTTTGTGGCTCCGGTGGATCGTCTACCGCTGAAGAATCAGCTGG
TCGTTCATCTGGTGGATCTGGCAGCTCCAGTGGTGGTTCATCAGGGGGAT
CATCAAAGGCACCATACATCCCTCCTGTCAACCCAGCTGGTGGTGAGGAC
GACGATGAAGATGATGATGACCCAGATTTTGATGTAACACACATCTTTTT
GAATCTTTTTAGTAACTTTTTGTTGTCATATAAATTATACCTTGTTAAGA
TTATCATAATTCCTTTCAATTGGACGAAGTAATGTTTCTCCATTTGTTTG
ATTTGTTGAAGCTGTTATATTATGCTGCTGCCCCACACGTTCTCTCGTTC
TATTAATAACCACAGCTTATTCAAAAAGTAAATACCCCATGTTAAGTATG
TCATATAATTTCGTCTATGAGACTCTTTTGCCCTCCACTAGTCACCACCA
GAAGATAGTGACGAAGCTGAATCTTCAGGCGATGATGATGAGGATGTTTC
TGGTGAATCTGGCGAAGAGGATGATGATGAAGATCAGTTTCAAGATTCAG
AAGGTTACGAATTCTCTCAAGGACAAGAGGTGAGACAAATGTTTTCTTCA
TTGTAAAATCTTTTAATGATGTAAAAATGTTAGGATTAAACTGCGCTTCT
TCCTTACATTTGGAGGCGGACTAAAGACAACTGGGAAGTGATACAGCAGG
GGAGAACTAGCTCAACCTATGATCTGAGATTCAAAGCTACCTGTAATTTG
ATTGTTTTTGTAATGATAAAATACCAACAAAAGTAATATTTTGAAATAGC
ACAATTCGAATTATCGTATATTTTTGTAATCTTGCAAAATTACGTTTTAT
TGACAAAAATCTTATTACTGTGGTTCATGGCAGGTTGGTAAAGATAGCGG
GACAACAGCCGTGGTAGCTTTGATACACAATAAACAGCTATACGTAGCCA
ACGCTGGCGATTCTCGGTGCATTTTGTGTAGAAATGGCAAAGTGGTTGAA
ATGTCTAAAGATCATAGCCCTGATGTTGAGGAAGAGCGGAAACGAATCGA
AGCAGCCGGCAGTAAAATTTGCTCTGAAGGTCGTATCAATGGTGGTATTA
ACCTAACGCGAGCCGTCGGTATGTGGAATGAATTGTTTTTTAGATTTATT
GACCTTTTCTCATTCATTATTCAAATCCTTCTATAATTCGAACTGATTTC
CAGTCCCTTCAAGGAGGGACCTCCCTTTAAATAGTTTCGAATAATGCGGA
ATTACCGACCAAGTAAGATTCCCAATTCGAATTCCAAATTGCACTTGAGT
TAGAATCCCCTCTTTTCGAGAATTTTAACCAACTTTCTTGTCTTTACACT
CAACAAATAAAGCCTCGCGAAACCAATTCTTTCACTAGAACAGAACCTTT
GGTAACTCGAACGATTTCCATTTATACTTTAGTTTCCACTGTAGATTAGA
ACAGTTAGCTCGAATAAAAAAAATGAGTTCTCGAAATGACAGTGAAAAAT
TTTTAATGAACTGTATCACTGTAGATTTTCGTAATAGTTTTTTGTTATTT
TCAAACTCTTCTTGTCTTCTTTTAAAGGTGACCACGCGTACAAACAAAAT
AAAGATTTGCCACCTGAAGAACAAGCGGTCACAGCGTTACCGGACGTTCG
TGTACAAGACCTTACTGAGTATAATGTTCTTCTATACGTCTTCTCGATTT
TTAGACCTACTTTGGAGATCCTTTAAATTAACCTATGTTCGTCCGTTCGT
TCGTTCGTTCGTCTGTTACAGCTATAAGCAAAAAACTCGTACCCAAAAAT
TTTTAAAATGTCAAAAAATGAAGGTCTTCAAATCTCTCTAAAACCTATTT
TTATGGGAAGCTATGGTATTTTGTAGCAAAAGGGGAAAAATAGAGCTTAA
CCTCGCTTTAAAGATTTTTTATCGCATTTTTTAGGTTTTTGTAAAATTGC
AGGCCAAAATAGGAGAAAAAATCATCAAGTTTTGCATTTTCTTCTCATTG
ACTTCATTTTTAACCCCTACTTTTAACCATTTTTGAAATCTACATAAAAT
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTGGAAAAACCCGGCCTTTTTTTAGGATTTAGTGCATGTTTTAAC
TTTCAAAGTTAATTTTTCTCATTCTTGTATGTATTTATGACAACTTGACA
TTAAAATATTAATGTTTCTTACAAATTCAGAAAAATTATTTCCTATTTAA
CATTTGTGATTTTTGGTGTTACATCACTTTTTGGGCCAAAATTGGGTCAT
TTTTAGGCCGAAATCCAAAAAAACAACAAAAGTAACCTGAAAATAACTCT
ATCGTGTTATAATATATCAGTGGAAGTGGAATTTTGAGTAGATTTTGAAT
ATCCAAGTTTCATGTCCTAAAAAACAACTTTACTCAAATTATTATGCTTT
AACAGCTAAAAAAAGACATGGGTACGAGCTTTTTGCTTATAGCTTTACCT
TTTTCTCGAGATTGGCTCATTAGTTTTTTCTTTTTTCTTTGCACAGTGAT
GCAAAATTGTGATTCCCAAAAAGTGACGGAGTCAGCTTGTTACTATTGTC
AAATGTTTGTCCAAATAAGCATTGGATTAACTTTATAAAACAATTGTAAA
ATTGAAGTATTACAAAATAGACAAACAATATTAAACATTTTGAGAGGGTT
AGGGTTTAAAAGCCATTGGACTATGGAAACATTTTCAAATTAATTGGGAA
CTTTTAAGGGGGCCGAATTTTTCGGTATATCAAAACTCATTGTAAGTATT
AAGACTGAGAAGTCTACATTAAAGATACAATGAGAAAATACATGTTTTTA
CAATTACTTTGTAAAGAAGTATTAATGAACTATTTGTTCCTTCCTTTTAG
CGAAGATGAATTCATGGTACTGGCGTGCGATGGTATATGGTAAGCTAAAT
TATATGTGCTTTTAAAGTACTGTTATTCATGATATGCACCATCACGAACC
CCCAACAGCTGATTGATTGTAAGGGATGTAAAATCAGTCAATACGTCACT
TTCAACTGATCAGCTGTTGGGTCTGTGGAATAAATGGCAATGGTGCATAT
CATGAATACGTCTTAGTTTATTAAGCTATGTTTTACGGTAAAAGTTATTC
TCAAGAAAATGAATCATCATAAACATGCAAAATGATTGCTGGTAAAGTAA
TAAGATTGATTTTGAAAGCAATAATTATACTTGAAACTGATATAACTTTT
ACCAACTATTTCTCTCAAATCTTAACCACTAAACTTACGATAACATTTTT
TTGAAAAAATGAGCAAATTTTTGAAGATTGTATTTATTCTTGTTTGAATC
AATCGAATATTAATTTGATTAAATGTTTGAGATTCACAGATTGCCTCAGG
TTTCTCATCATCATGTGGCGACCACAATAAGAACAATGACATTAAAAATC
CTTCTCCAAACATCACTATTCCTCATAACTGTCCAAAGATCTCGTTTTAG
TTTGTTTGTGTCCCTGTCTAAAAAAGGTATTTTATTGTACCCCTTGTAGA
GTCCGAAGAATCTCCAAAATATCTTTCTTATGGAATAGTTGTAATGAAAA
TTCATTATTTCTCAGGAATGTGATGACGAATGATGAAGTATTAGATTTTG
TGCGCGACCGAATCACTGCAAACGAAAAAGCTGATGAAAAACTCAAATTA
TCCCAAATTTGTGAAGAGGTATTAGTCACGTTTGTTTTACAATTCTGATT
ATGTTTTCTACAAATTCTGAGGCTCGTTTCCAACCCTCTTTAATTGACTA
ATTGTGTTTATTACATTTTTTGGACCTACCTCCGGGTTCCCCGGTGGAGG
TTCTATAAATTAACCCATGTCCGTTCGTCCGTTCGTTCGTCCGTCTGTTA
CCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTCTGATTTTTGGCATAT
TTGGGCAAATTTGGGCCAAAAACTACCTAAAAATAGGGTTTTTTGGACTT
TGTGCAAAATCCTGTCATTACTTTTTTCTGATTTTTGGCATATTTGGGCA
AATTTGGGCCAAAAACTACCTAAAAATAGGGTTTTTTGGACTTTGTGCAA
AATCCTGTCATTACTTTTTTCTGATTTTTGGCATATTTGGGCAAATTTGG
GCCAAAAACAGCTTAAAAGGTTTTTTGGGCCTGAATGGTTTAAGTGATTT
TCGTATTTGGGGAAATTCCTTTTTACCATTTTACATTATTCAACACACAA
GCTTTATTTTTCCATTCTGAATTTCGTACAATTACTGTCACTTTTTTCTT
ATTTTCATCTGATGTCATTAGGTAGGTCCATTCAGCATGTTGCTTGTTGT
TTTTGATCCGATAATTAATTACCGCTTTCATCAGCTTTCATATCTATGAA
GAGACCAACTTCATTAATGAAAAAAATGTCTATCCTTTGGTATTTTAATT
TTCATCGACCTTCTTTCGACATATCCACTTCAATCTAATAAAGAGGGCTG
ATTCTCAAGTCTGAACACTGATCTAGATGATAAACAATATTGATTGAAGA
AGTATCGTTTGCAAGATTTTAGCAAAGATTTTAACACAAAATGTCCTAAA
ACAGTCTTCAGACTTGAAGAACAGATAGATTTTGATGCTTAAAGGTTTTG
ATTAATATAGTCAAATTTTTCAAAGCTAATTATCTTAATCTTGGTGGTCT
ATATCATTTTCGCCTGTGAAACATTTTTTAATCCCATCACACTTCTTTTA
TTTACAGATGTTCGACCACTGTTTGGCACCGGACACACAAAATGATGGTA
CTGGGTGTGACAATATGACGTGCATGATCATTCAATTCAAAAAGAAATTC
CTTCAAAACGGACATTCTACTGCGCCAAATAAACGAGAACTTTCTCCTTC
TGCTGATGAAGAGTCTAAACAGAAGTCTAAAAAATCCAAATTGAGCTGAA
GCTAATGAATGGCTGTAGTATAGCTTTAGTCTATTTACAGTGTTCTAACC
TCGGAAATCTCCTCGTCGAGAGTTTACAAGGCTTACCGCGGAAGACTTCG
GTTATTTGGTTTTTGAGCTTTATAATGGTTTCAATGGCTATTGGAGATGT
TAATTTTTTTAAGTTTGGTTCCAAAACGAGTCAATTCTGGTAAACCATTT
ATCATATTTGACGGAACGGCAATCAGTGAAAAATTTGCTTTTAAAATTTT
CGGATGATATTTTTTATTTGTCAGAGTTTATTATTAAAAAAGAGGTGTAT
TTATGACGAGAAAAATCTTTCGTGGCAATTTTTGCGTTTTTAAAAACTGA
ATGTTTACTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031137XLOC_031137Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049015-exon-scaffold_15-1575043694:214026..214165TCONS_00049015-exon-scaffold_15-1575043694:214026..214165Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1575043694:213703..213775TCONS_00049015-exon-scaffold_15-1575043694:213703..213775Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1575043694:213450..213586TCONS_00049015-exon-scaffold_15-1575043694:213450..213586Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1575043694:212895..212987TCONS_00049015-exon-scaffold_15-1575043694:212895..212987Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1575043694:211720..211752TCONS_00049015-exon-scaffold_15-1575043694:211720..211752Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1575043694:211371..211506TCONS_00049015-exon-scaffold_15-1575043694:211371..211506Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1575043694:211025..211079TCONS_00049015-exon-scaffold_15-1575043694:211025..211079Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1575043694:210033..210345TCONS_00049015-exon-scaffold_15-1575043694:210033..210345Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1575043694:209637..209774TCONS_00049015-exon-scaffold_15-1575043694:209637..209774Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1575043694:209098..209332TCONS_00049015-exon-scaffold_15-1575043694:209098..209332Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1575043694:208548..208638TCONS_00049015-exon-scaffold_15-1575043694:208548..208638Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1575043694:206777..206815TCONS_00049015-exon-scaffold_15-1575043694:206777..206815Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1575043694:205998..206100TCONS_00049015-exon-scaffold_15-1575043694:205998..206100Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1575043694:204406..204958TCONS_00049015-exon-scaffold_15-1575043694:204406..204958Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1510915933:214026..214165TCONS_00049015-exon-scaffold_15-1510915933:214026..214165Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1510915933:213703..213775TCONS_00049015-exon-scaffold_15-1510915933:213703..213775Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1510915933:213450..213586TCONS_00049015-exon-scaffold_15-1510915933:213450..213586Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1510915933:212895..212987TCONS_00049015-exon-scaffold_15-1510915933:212895..212987Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1510915933:211720..211752TCONS_00049015-exon-scaffold_15-1510915933:211720..211752Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1510915933:211371..211506TCONS_00049015-exon-scaffold_15-1510915933:211371..211506Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1510915933:211025..211079TCONS_00049015-exon-scaffold_15-1510915933:211025..211079Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1510915933:210033..210345TCONS_00049015-exon-scaffold_15-1510915933:210033..210345Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1510915933:209637..209774TCONS_00049015-exon-scaffold_15-1510915933:209637..209774Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1510915933:209098..209332TCONS_00049015-exon-scaffold_15-1510915933:209098..209332Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1510915933:208548..208638TCONS_00049015-exon-scaffold_15-1510915933:208548..208638Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1510915933:206777..206815TCONS_00049015-exon-scaffold_15-1510915933:206777..206815Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1510915933:205998..206100TCONS_00049015-exon-scaffold_15-1510915933:205998..206100Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1510915933:204406..204958TCONS_00049015-exon-scaffold_15-1510915933:204406..204958Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1491911889:214026..214165TCONS_00049015-exon-scaffold_15-1491911889:214026..214165Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1491911889:213703..213775TCONS_00049015-exon-scaffold_15-1491911889:213703..213775Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1491911889:213450..213586TCONS_00049015-exon-scaffold_15-1491911889:213450..213586Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1491911889:212895..212987TCONS_00049015-exon-scaffold_15-1491911889:212895..212987Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1491911889:211720..211752TCONS_00049015-exon-scaffold_15-1491911889:211720..211752Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1491911889:211371..211506TCONS_00049015-exon-scaffold_15-1491911889:211371..211506Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1491911889:211025..211079TCONS_00049015-exon-scaffold_15-1491911889:211025..211079Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1491911889:210033..210345TCONS_00049015-exon-scaffold_15-1491911889:210033..210345Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1491911889:209637..209774TCONS_00049015-exon-scaffold_15-1491911889:209637..209774Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1491911889:209098..209332TCONS_00049015-exon-scaffold_15-1491911889:209098..209332Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1491911889:208548..208638TCONS_00049015-exon-scaffold_15-1491911889:208548..208638Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1491911889:206777..206815TCONS_00049015-exon-scaffold_15-1491911889:206777..206815Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1491911889:205998..206100TCONS_00049015-exon-scaffold_15-1491911889:205998..206100Clytia hemisphaericaexon
TCONS_00049015-exon-scaffold_15-1491911889:204406..204958TCONS_00049015-exon-scaffold_15-1491911889:204406..204958Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:204406..214165 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
71.3989	65.9534	33.9887	30.2833	24.8811	21.6685	40.105	40.9239	47.7561	45.0299	44.4153	40.625	28.4355	33.4689	52.6928	59.2012	79.7527	77.7496	17.8752	21.5532	51.1632	48.8596	61.0195	61.1911	50.331	56.7601	28.7605	24.6575	40.1573	40.2982
Blast
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BLAST of TCONS_00049015 vs. Swiss-Prot (Human)
Match: PPM1G (Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 7.479e-74
Identity = 114/188 (60.64%), Postives = 147/188 (78.19%), Query Frame = 3 
Query: 1113 QEVGKDSGTTAVVALIHNKQLYVANAGDSRCILCRNGKVVEMSKDHSPDVEEERKRIEAAGSKICSEGRINGGINLTRAVGDHAYKQNKDLPPEEQAVTALPDVRVQDLTDEDEFMVLACDGIWNVMTNDEVLDFVRDRITANEKADEKLKLSQICEEMFDHCLAPDTQNDGTGCDNMTCMIIQFKKK 1676
            +E G DSGTTAVVALI  KQL VANAGDSRC++   GK ++MS DH P+ E E  RI+ AG K+  +GR+NGG+NL+RA+GDH YK+NK+LPPEEQ ++ALPD++V  LTD+ EFMV+ACDGIWNVM++ EV+DF++ +I+  ++  E   LS I EE+ D CLAPDT  DGTGCDNMTC+II FK +
Sbjct:  321 EEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFKPR 508

HSP 2 Score: 126.331 bits (316), Expect = 2.066e-30
Identity = 75/167 (44.91%), Postives = 102/167 (61.08%), Query Frame = 3 
Query:   30 MGAYLPKPVTEKTSHD---ESLDHLSFGISGMQGWRENMEDAHCAMPDFDGKNNALFGVFDGHGGEEVAVYVSQNLHKFILDCDSYMEGEIESALKEAFMNIDQAVITEEVIEELKEIAGFNEGNEEERA---------GELNALL-EEAHMPIEDILANIQQKCQE 491
            MGAYL +P T K S D        L +G S MQGWR +MEDAH  +P+ D +  A+F V+DGHGGEEVA+Y ++ L   I D  +Y EG+++ AL++AF+ ID  + TEEVI+EL +IAG    +E+E+           E  ALL EEA M IE++L    Q C +
Sbjct:    1 MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNCIPELDSET-AMFSVYDGHGGEEVALYCAKYLPDIIKDQKAYKEGKLQKALEDAFLAIDAKLTTEEVIKELAQIAGRPTEDEDEKEKVADEDDVDNEEAALLHEEATMTIEELLTRYGQNCHK 166
The following BLAST results are available for this feature:
BLAST of TCONS_00049015 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPM1G7.479e-7460.64Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE... [more]
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