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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048949 ID=TCONS_00048949|Name=TCONS_00048949|organism=Clytia hemisphaerica|type=transcript|length=873bp
AACTTTCGGGATTTATATTTCACAAATTGTCGAATAGGTAggttcaaaaa
atcttttaatatttGTACACGATTTATAGTTCGTTTGATACTGCTTGGGA
AAAATAATTGATTACTTTTATCGAGTTCTTGTATTTTGAAATCAATGAAA
CAGGACAGTAAAATGGTCATTACTCAAACAATAAACGGGCTATAATTTCT
TTCTCAACcagttttgattaaaaataaaacttatctaaatcatttcaaat
cttattgctcaaataaatttgaatatctgATTCGGTGAATTGGGTCTGTG
ATAAAAAGGTTACCATTTTCTATCTGTTTCATTGTGACAAGTTTATGGGC
TTAGTTCGGAAATAAGATACCATTCAAGCATAACAGACATGCTTTAAACT
GATGACAAATAGCTTATGATCTTTTGGTTGCCTTTACTGCCAAGAGAATA
TGAAATTTTCCAACCTTTGAATTTGTTTGTAGTAGTAGCGCGTTAGACAT
TTTCAAACAGAGATCGATGGAACATAATTTGTCGAATAATTCTCATATTT
CGTCTTTAAAACAATTTGTTCAGATGTTGAGGAGAGATATTATGCTAATG
TTAAAAGTAAGTAAGATAGGATGAATAATCAATTAGTTTTACTTCTTTTG
AGCCAGCTTTAATTGATTGTACGCTATGTTCGAAAAGAAATTTGGACAAC
TGCTTTCAAAGAATGAGAATAGTCTGTTTTGTAACAGATTTAACATGTAA
TTGCGTTGTCGTAAGAAACTGTTGGCtcagacaaaaatatttttcagaga
CTTTACTGTAAAATTTCGGTTGTTCTCATTTTAGGATCGGGTTGCTGGTA
TAAACCGAAATTTTTGATTTCCC Run BLAST on NCBI transcript from alignment at scaffold_148:219945..220817 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048949 ID=TCONS_00048949|Name=TCONS_00048949|organism=Clytia hemisphaerica|type=transcript|length=873bp|location=Sequence derived from alignment at scaffold_148:219945..220817 (Clytia hemisphaerica)
GGGAAATCAAAAATTTCGGTTTATACCAGCAACCCGATCCTAAAATGAGA
ACAACCGAAATTTTACAGTAAAGtctctgaaaaatatttttgtctgaGCC
AACAGTTTCTTACGACAACGCAATTACATGTTAAATCTGTTACAAAACAG
ACTATTCTCATTCTTTGAAAGCAGTTGTCCAAATTTCTTTTCGAACATAG
CGTACAATCAATTAAAGCTGGCTCAAAAGAAGTAAAACTAATTGATTATT
CATCCTATCTTACTTACTTTTAACATTAGCATAATATCTCTCCTCAACAT
CTGAACAAATTGTTTTAAAGACGAAATATGAGAATTATTCGACAAATTAT
GTTCCATCGATCTCTGTTTGAAAATGTCTAACGCGCTACTACTACAAACA
AATTCAAAGGTTGGAAAATTTCATATTCTCTTGGCAGTAAAGGCAACCAA
AAGATCATAAGCTATTTGTCATCAGTTTAAAGCATGTCTGTTATGCTTGA
ATGGTATCTTATTTCCGAACTAAGCCCATAAACTTGTCACAATGAAACAG
ATAGAAAATGGTAACCTTTTTATCACAGACCCAATTCACCGAATcagata
ttcaaatttatttgagcaataagatttgaaatgatttagataagttttat
ttttaatcaaaactgGTTGAGAAAGAAATTATAGCCCGTTTATTGTTTGA
GTAATGACCATTTTACTGTCCTGTTTCATTGATTTCAAAATACAAGAACT
CGATAAAAGTAATCAATTATTTTTCCCAAGCAGTATCAAACGAACTATAA
ATCGTGTACaaatattaaaagattttttgaaccTACCTATTCGACAATTT
GTGAAATATAAATCCCGAAAGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048949-exon-scaffold_148-1491911889:219945..220817 | TCONS_00048949-exon-scaffold_148-1491911889:219945..220817 | Clytia hemisphaerica | exon |
| TCONS_00048949-exon-scaffold_148-1510915933:219945..220817 | TCONS_00048949-exon-scaffold_148-1510915933:219945..220817 | Clytia hemisphaerica | exon |
| TCONS_00048949-exon-scaffold_148-1575043694:219945..220817 | TCONS_00048949-exon-scaffold_148-1575043694:219945..220817 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_148 | supercontig | scaffold_148:219945..220817 . |
Blast
The following BLAST results are available for this feature:
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