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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048883 ID=TCONS_00048883|Name=TCONS_00048883|organism=Clytia hemisphaerica|type=transcript|length=64bp
TTACTGGCAGGATCAACCAGGTAACTACAATTTATGGCAGTgaaactaag
agttccaacagACA Run BLAST on NCBI transcript from alignment at scaffold_148:248928..251061+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048883 ID=TCONS_00048883|Name=TCONS_00048883|organism=Clytia hemisphaerica|type=transcript|length=2134bp|location=Sequence derived from alignment at scaffold_148:248928..251061+ (Clytia hemisphaerica)
TTACTGGCAGGATCAACCAGGTAACTAAAATTTATGGCAGTgaaactaag
agttccaacagACATAGTTCAGAAGTCTGAAATCATTGCACCATGATGGC
TATCATCTTGTAGAAATTTGCAGATTGTAACTAACTCTCTTGATAGGGCT
TGATAGTGAAGGGTAGCTTATGTGTATTTTTTCATCATCAAATTGTTAGC
CAAAAAATCATTTGTTAGAAATATTTACTTACTAAATTGCTATCCTTACA
TTCACTTCATTATCTCAAAATCATACTGTGCTCTTTTTCCCAGTGAGAGT
TAATTTCAGTGTAGTTTTCGAGCCGGGcgaaattttagggtatttcTTGA
GATTATTTCAACCTCTAAAGACCaatgatagaaattttatcgcgcgtgtg
tcaatctaatcactgtagaaaaaatctaagatgaagagcaaatgttacca
tattaatgtctagcagactgtatcagtatgcattTTACtctttacgaatt
ccccagaaacctccaagtgtaattgaaacgagtttttttcaaaagaaatc
ttttacatgatccccaaatgtgtaacagtaattactaaacctttaattat
ggaaatgtcactttaattgaattgaaataatacacagactttatgttatg
attctctatcactgactcttttgaaaaagcattgatgacatttctgagtt
gtgttttcaaattacacgctgaatagaatctggattggtcggcacagcgt
cgatatatgatttcgacctgtgcttttcacggtaatatTTTATTAGACCA
TATTTCACCAAAAGCACATTACAACAAAACAAACCATTATTTTCTGCTCC
Atttgattgaaagaaaaatgcttctattttttttacgttacataaattaa
aaataaaaaatattccaCTTCTTGGAACGCCTTGGAGTCTAACGTTTACT
TCTACTTCAAAATTTTATGAATATGTTTTCGCCAGAtttgatttaaaata
aaaaatgtgaaaGAAATCTCCATTTTAGAGATATTAAAAGTTGTATTATT
ATTTGTACAGTACTATTTAATAGTAACGGTAATTTTTACTTTATCGATTC
GTaccaaaattacaaagaaactaATTTGCATTTCATTGGCAAGGATATAT
TTTGTACTGTACGTTCTCTATTTATTTGCTGAAATAAGAACACAAATTTT
GGATGATAGAGAAAActcatcaaaagttttctggCCCTTGCTCACCAAAG
AAATTTTCGAAACCGAGGTCGTATCTTGCTAAGACgggtcattttttctt
ttgtttaaaggttaaatattgaaaatacgAATTTTATGAGTTCTAACAAT
TTTGGATTTAGAGAATGGAAAATTTCAGTTtaattttcagagttttttgG
GTGTGGCTcacaaataaacaataaaaCGGGAAAATGGTCAGAAAAATATA
AAGAGGTCATAAGTTTGATACTTACCAACGAAACGTGCGAAGCGTGAATC
GACACGTgacttttctttgattgtagATGGTTGCAAGCGAAGTCGTGCAG
TCAGTCACATActcttttcgaaaatcgtgcATCAAGTCACATACACAAAA
ATGCTCGTCAAACCTTTTGTCAATCTACTATTCTTTTCTGATGAAAAACC
TTTGTAGCGCTCAATAGCTTTTTAATTAACCTTTTGAAAAGTTACATCAC
CTAGGGATAACATTTCTATTTTTTGTCCATGAATGCACTCTTGAAATGGA
ATACCATTAGTTTGACAAGAATCAAACACGTCATGTGGACAAAAAGACAA
TACGCCTCGTTCTATTGTTcacaaaaataacaataaaacgaATCATGTCA
CCAATTAAAGGAACATTTCTAAAGTTATGCATCTTCTTTAACGTCCGCAG
AGCATCGTAAttctagcttttgtaattttaattctacgcgacaaaatttc
ttctcttaatgATCACTATCTATTAATTATACATCTTCAATTAAATGTTC
ATCTAATAACGTAGATGCATACTTTGTAGAATTCTTCCTGAGGCCCCGGG
GCCAGGGGGACACTCGATTTCGNCTGGCAGGATCAACCAGGTAACTACAA
TTTATGGCAGTgaaactaagagttccaacagACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048883-exon-scaffold_148-1491911889:248928..248947 | TCONS_00048883-exon-scaffold_148-1491911889:248928..248947 | Clytia hemisphaerica | exon |
| TCONS_00048883-exon-scaffold_148-1510915933:248928..248947 | TCONS_00048883-exon-scaffold_148-1510915933:248928..248947 | Clytia hemisphaerica | exon |
| TCONS_00048883-exon-scaffold_148-1575043694:248928..248947 | TCONS_00048883-exon-scaffold_148-1575043694:248928..248947 | Clytia hemisphaerica | exon |
| TCONS_00048883-exon-scaffold_148-1491911889:251018..251061 | TCONS_00048883-exon-scaffold_148-1491911889:251018..251061 | Clytia hemisphaerica | exon |
| TCONS_00048883-exon-scaffold_148-1510915933:251018..251061 | TCONS_00048883-exon-scaffold_148-1510915933:251018..251061 | Clytia hemisphaerica | exon |
| TCONS_00048883-exon-scaffold_148-1575043694:251018..251061 | TCONS_00048883-exon-scaffold_148-1575043694:251018..251061 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_148 | supercontig | scaffold_148:248928..251061 + |
Blast
The following BLAST results are available for this feature:
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