TCONS_00048839 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048839
Unique NameTCONS_00048839
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length997

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048839 ID=TCONS_00048839|Name=TCONS_00048839|organism=Clytia hemisphaerica|type=transcript|length=997bp
CATAATATTATAAAGTTTATGTGAGGctacaaaatattacaaaaacatGT
CCGAAAAAGATTTTCTCGATGTTTTCCGTAAAGAATATAAAGTTGATGCC
GTCACTTTTATGAAGGCTTTTGAAGAGGCAGATGAGGATGGCAATGGACA
AATTTCTTCTTCAGAACTCATTaaatttttaaaagcatTGGGTGTGGACG
CCAAAGAAACTGAAGAACTCAAAGAACACATTATTGAACTATACGACAAA
AATCATGATGGAAAACTTGGGCTAACAGAACTCTCAAAATTATTACAATC
TGATCAAAATGTATTGAAAGCCTTCGTCGAGgGTGAAGACTTAACAGAAG
AAAAATTCAATGAAGTTTTTGCTCACTACGATCGCGATAACGGTGGTACG
ATCAATAACAGTGAATTGAGTGGTTTCTTAAAAGATATGAAGTCAACACA
AGATGTTAATGTGGAATCGAAAGAACTGAAAGAATACGAGATTTGGATCC
TCGGTGAAGCAGATAAAAATAATGATGGTGAACTTTCAAAAGATGAACTT
CGAATGTTATTCTTCGGTTAAAAACAAGACTCCACGATAAAAAAATATCG
TATTTGTATACTGAGAATTAGCTTTTTATAGAGTAAATTTATAATGTGTT
AttaatttttgtacattttcatATTATTTCAAACTAAATTTTTGACTCTG
ATACTTCTGTCAAATATGCTACATTAATTACCAACTAGTATAATCAACAT
GGTACATTATAATATTTCGTTCTTATTTctttctttgaagaaaattacTC
TTGATTTTAAGATGTTATACAACTCAGAGAAATTTAAGGACTCGTTATCT
TCATTGAACTACAAAGAAGccattgattttttctgcaaatattatataat
tgtttttttgtaaacttctactatattatatattatatctATATTCTTAT
AATATTTTGATGATTACATCGAGACATCAATAATGCAATAAACATTC
Run BLAST on NCBI

transcript from alignment at scaffold_147:243628..253861+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048839 ID=TCONS_00048839|Name=TCONS_00048839|organism=Clytia hemisphaerica|type=transcript|length=10234bp|location=Sequence derived from alignment at scaffold_147:243628..253861+ (Clytia hemisphaerica)
CATAATATTATAAAGTTTATGTGAGGTAGGTCATCCTCACATTGGTAAAA
CGAAAATCACATTTGTATGGCTTTGGATGAGGAGGATAATTTCTTAAGTG
ATGATACAGGGTGTTCAATATTGCTCTAAACGTCGTAATCGATTGAATTA
GAATCTGGTATATTGTCTACTCGTGCCTGAAATGTTTAGGGCATTTTGTT
TTGGAGATGGGGAGAAGCATAGAGATACTAGGTGGTGGTACTCGATCTAG
CATCGTTAGGAAAAGCTTAAAACAAGCTTATACAGTCGACGCTCTCTAAt
ccgatcttcaaggggaattgggttttcattgaataaggtcgaattagaga
gtgtcaactgtacaTTCAACATAAAGGATTGGGTCGGTTTCAAAGCGAGA
GCAAGTACAACTTCAGTCGAGGTTGCTTAAATTGAAACAAGGCATTTGCT
ACGATAGTAGATTCTAAAAACAACGATAGACTCTTGGGAAAAATCCCATC
TAAGATTTCTTGATTTTNTCTAAACGTCGTAATCGATTGAATTAGAATCT
GGTATATTGTCTACTCGTGCCTGAAATGTTTAGGGCATTTTGTTTTGGAG
ATGGGGAGAAGCATAGAGATACTAGGTGGTGGTACTCGATCTAGCATCGT
TAGGAAAAGCTTAAAACAAGCTTATACAGTCGACGCTCTCTAAtccgatc
ttcaaggggaattgggttttcattgaataaggtcgaattagagagtgtca
actgtacaTTCAACATAAAGGATTGGGTCGGTTTCAAAGCGAGAGCAAGT
ACAACTTCAGTCGAGGTTGCTTAAATTGAAACAAGGCATTTGCTACGATA
GTAGATTCTAAAAACAACGATAGACTCTTGGGAAAAATCCCATCTAAGAT
TTCTTGATTTTCCGTGTTGGCAGATTTACTATGCTATTTGCTATATGACT
GTCAAAAATATATTCTTGTACGAAAAAACTGTTGATTACATATTAATCCT
CGTGATTATCAAATCTTTTCCTTGTTCAAAAAGTTCGAATCTTATTTCAA
TTTCATCCTTGGTTTTTTACTCTACTATAAGGTAACTAAATTTGTAGGAT
ACAATTTTAAGGATATAATTGTCGTGTTATATAATTATTGTAAACTATAG
TTTTAAACCAGTCTTACCTATTTCTCCCTTTTAAATCGAGTGGTCAAGAG
TTTTGGCCTTACGTTTGGGACTATAATGGTTGATTTTGATGTATACACAC
GTCGAAAAAGATTATGGATCGATGTATATTTGGTCACATTTTTGGACCGT
GACTTATATTTATATTTGGGCTAAGTATTTATGTTTtgggaacaaaaatt
ttttaaataatattttgacaaaCTTGTTTTGTGTTTCCTTTCGCCATTAA
AAGTGTCGTGACATTTGTTCATAAAACAGCTTTGTGCTTGGGTTTGCCTA
TGTGatatttttaatcgaaaatCAGTCACGCATACTAACTTCAACAGCTA
GTGTTTGGAAAATAGACTCAATGAAAGTTAAACCTAGTTACTCTTAACAT
AGGGTATGTAAGTCAAGGTCCGATGTTTCTCTTTGGAAATTTCTGGTATG
ATGCCTGGACGCCTTTCATATATTAAGTCACCTTAGTCAAATATAACGGC
TAAAATTATTAAAGCCCTTTTTGTGTTTTGTGTGGTTATGGTATCACGTT
TTTGTTAAGGTTTTGCCGTGCTGTTCGTGTTTGCATTCCggtagaaaaaa
aagtttgtttttctctATGATCTAtgggttttcttttttttgtttgttaa
taTAGAATATTTCAATCATCTAAAACTAAAAATACCCATGTGAAGCTCTT
GGATGTTTTCCGTAAAAGCTATATAAAGTGACGCcgtccaaatttgaaat
agcACTTTTTTCTATAGACTAACCCCTTGATATTTTTAGTAGCAGCCACC
AAGTCGATACCTTCACAATTTGGCATAGCACTTTATTCTACAAGTTAATC
TGAAAACAAGACAGGCTTTTCTCGCAAAACCAACATTTTACGCCAAAGCA
TATCTTCTTTGTTTCCAAAGAAGCCTGTAGAAAAGTACCGTAACGTGGAC
GAAGGCTCAAGAAACTCTGTTCATCGTTTCAAGATTCGTTAATATAAGGG
AAATTTTAAACTCGAAATCCGAATCTAAATGGTTACGAGTGAATGATATT
TGATCAATAAGAAGAGAACTGAATTTAGTTGTATATCTAATACTTGATGT
GTTTCTTTGTAGGctacaaaatattacaaaaacatGTCCGAAAAAGATTT
TCTCGATGTTTTCCGTAAAGAATATAAAGTTGATGCCGTCACTTTTATGA
AGGTTAGTTGTTTGACTCGCTACAttctacacccccttctcacagaccca
ctggatcttcttgtggaaaattatactccaatttttgtccccgctgaaaa
taatcagtcaaggaaatcctcactgcaaaatagtGTGCTATTTTTTCGAT
CCACCCTGAATTTTCTTGCTGGAAAtcataaaagaattgaaatcccaaga
attgaaaaatatttggttGGTATGCCGGTATTTCATGAAAAGATTACCGG
TATTCCAGTACTTTTTATCCACGGAAGCCCCTCACTATATATTTGAGGGT
ACTTTTAGGCAACTCTgactttcaaatgaaaaaatgagTCACTAgcagaa
ttaaaaaattaattcatcTCTTCATCCGACTCTTTTCCGGGAAATAACGC
TTTAACAATTCTCGTCATTAGTCCCGGGAATTTAACCTAGATTCCCTTCA
TTATTTCTTGgctattttttatgaataaccGAACTGGACTCGTGTAAAAC
TGGAAGGAATTAGCTACAGTTTCATCGAATGTGTTACAATCGTTTAGCTT
TAAATTCCATGACATTTGTGTATAAGagcacccctgtctcgcagccccga
TCGAATTTTTCCAACAGCTTGAGATAAAAGTTTTATCGAATTTCCAACGG
TGATAGAAGCTCTTTTGTTCCAAGCTCAAAAAATCAGAATGGTTTTGGAC
CGCaattttttctattgaattttaaatggggATCAAGGGATTCAATCAAA
GTCCTTTTCccaatggggctgaaattgaagggtatttttcccaccgggga
ccaaatttttgaccaaatttttgaccaaattttccaaTGGTCAGGTTGGA
GGTGACACGGTGGTGTATATGatagattttttttgattttttttttattt
cttactATAATTTTTTACTTTCCAGGCTTTTGAAGAGGCAGATGAGGATG
GCAATGGACAAATTTCTTCTTCAGAACTCATTGTAAGTTTGCTGTtttaa
aacttcatcatcattATTGACAGGGAGTCTTTGATAACTGACGGAAAAAC
GCTGGAGATTTTAGGAACTTAAACTCTCATATGATTATTTGCAACGAGAT
CTTTAAGCCTGATTTTTGGACCTCAAATGTGTTAAAATATgtcaaacgtt
tttttttaattcaatgaTTTTGAAATCCTGTCAGAGATtaaaaatggttg
ttttttgTACCTGGATTGGTTAAATATTCTTATCCACTTTCTTTACAAct
agaaatttttaaaagcatTGGGTGTGGACGCCAAAGAAACTGAAGAACTC
AAAGAACACATTGTAAGTAGTGATGCCGGTCACGGTTTTCTTGATCTAGG
TCCCGTAAAAGTATCAATATGAACAACACCTGATTTGTAACTGTTCAAAT
TAAGAATGAGctgtacatgtttttcttttatgagAACGTTCAAAGAATTT
TTAATCTTCGgattttcttagtttttttagttttgcgagatgctcttaaa
atgttctcatttttttcaccattttgtgagttaTCTTGTGTAATTTCTTA
TCAACTTTCATGTTTTAAAGTCCACAAATCTTCAAAATGTCCTAACTTGC
CGATAACTTCGTAGccttatgtttttttatattaagAATTTCTTCAAATA
TAACAGACGTCTAAAATCGTTTGGTTGAGCTAGGatctaaaacatttttc
tgtGTTCCTAACTGCATCATCCGTTATAACTTACTAGAAAATGTTATAAT
AGTGTACAAGCTTCGCTATATTAATTCTAGATTGAACTATACGACAAAAA
TCATGATGGAAAACTTGGGCTAACAGAACTCTCAAAGTAAGTTGTTTAGA
ATCTTACCACAAAAGTACCACAAGTTTGACAGCAAAAACTCTGAGGCATT
AGGTATGATCATTTATTTACAAGAAGAACCGTATTTAAAGATGTCTTATT
TTGAAGGTATCTTTTTCTTGTGTTTCATGTGTTTAATCATATCCTTTGCA
TCGtattctgaaaatgaataatCAGTAACTTAATTTCGCTTTTCGATTTT
AGATTATTACAATCTGATCAAAATGTATTGAAAGCCTTCGTCGAGGTAAG
TTTGCTTGTTCTTTTTGCACTATGCTAGATATCCTATCCNTTTCTTTTAT
GAGAACGTTCAAAGAATTTTTAATCTTCGgattttcttagtttttttagt
tttgcgagatgctcttaaaatgttctcatttttttcaccattttgtgagt
taTCTTGTGTAATTTCTTATCAACTTTCATGTTTTAAAGTCCACAAATCT
TCAAAATGTCCTAACTTGCCGATAACTTCGTAGccttatgtttttttata
ttaagAATTTCTTCAAATATAACAGACGTCTAAAATCGTTTGGTTGAGCT
AGGatctaaaacatttttctgtGTTCCTAACTGCATCATCCGTTATAACT
TACTAGAAAATGTTATAATAGTGTACAAGCTTCGCTATATTAATTCTAGA
TTGAACTATACGACAAAAATCATGATGGAAAACTTGGGCTAACAGAACTC
TCAAAGTAAGTTGTTTAGAATCTTACCACAAAAGTACCACAAGTTTGACA
GCAAAAACTCTGAGGCATTAGGTATGATCATTTATTTACAAGAAGAACCG
TATTTAAAGATGTCTTATTTTGAAGGTATCTTTTTCTTGTGTTTCATGTG
TTTAATCATATCCTTTGCATCGtattctgaaaatgaataatCAGTAACTT
AATTTCGCTTTTCGATTTTAGATTATTACAATCTGATCAAAATGTATTGA
AAGCCTTCGTCGAGGTAAGTTTGCTTGTTCTTTTTGCACTATGCTAGATA
TCCTATCCAGAACCTCCCTTCCCAATTCGAGATTTTCGAGAGAAAAGAAG
TTTGGGAAGGTTTTAGCCAATCAAACGGCGACTGAAAGCTTATCGACTTT
GGCTTATCATTAAACTGTTAGTTTGTTAGATATTTTCCAGGGAAGTGATA
TTCTGTGTCAATGACgagttatcttttttttttcaattccaggGTGAAGA
CTTAACAGAAGAAAAATTCAATGAAGTTTTTGCTCACTACGATCGCGTAA
GTTCGACAGACTCTAAGATCGCAGAACTTTTTGCCATTTCCCTAATCATT
GACTATAAAAGTTTTGTTCGTAAAAAATTATGTGCTGTATTCTTAGTGTG
TGTTACATGCAAACCTGATTAAAATTACTTTAACCGGGCAAATCTTCACG
AGATTTAATCTTGAGAGCAAAAAATTTGCGAATTTaatttggatttattt
tttgcaggaatttaatttcgcaaatcagCCAAGAAAACTAGCTTAATNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtcgg
atttttcataccaattttgaaaaacaggcggcaacgaagctcgcttcaaa
gagacaataaaagatagatgtccagtcgtttatatgttcatggctTAATA
CACCAGATTTTGTAAGATCAGCAAATTAACAGGGATACGAATTTTTAGCC
GGaaataagaatttgaatatttcacgtagatttatttttgcgaGATATTC
TTTTCTCGAAAAAGGCCTAAATTTGCGAAAACAcaaaattaaatccaaaa
tACATATTAATCCGAATAAAATAGAAGATGTCACTGTTCTTTCATCAATT
GATAGAATTATTCAAAGTTGAATTTAGCTTATATTTTGCTTCAGGATAAC
GGTGGTACGATCAATAACAGTGAATTGAGTGGTTTCTTAAAAGATATGAA
GTCAACACAAGATGTTGTAagtaaaactttcaaatttaaatCATACTATG
GGGTGTACGGGTTTAACCGTGTGGCGGTATTTACCCCTTTTTTCGATCGA
GAGAAAAAGTGACGGTGTTTCGGTATTAAACATGCGGTGACAAAATaacg
aatttttcgaaaaaaattactGTTGGCGTTGACGATGGTCCAACAAAAAT
GCGTACGACCATTATATTCATGGTATTATCCGCGTAATGTTTTTTACGGA
AATAgtccggtttttgccagtagtgatAAAATTTCAACAGTTTTTCTCTA
GTatatatttcttaaatttgccactactggcaaagcCGGGGTGTttctgt
agaaaacattacgtttTACGTTATGAATATTACGAATCTATGTTTTCTCG
ACATTTTGTCCTTATAATTAATTTGAAAAGCCTACACCTAAACCTGCTGG
TGTTACCCCTTCAATGAATAAAATACTGTTTGTGACAGTTTTCTACTAAA
AAATGGGATACTCTCATTGATCCaaagatattcttgttttatGATGTTTA
TGATTTGAAAAGGAGGCGCGCTTCTATACTGGCAAGAGGAATAAAcgaaa
gaatttctcaaaatttgtgatCTTGTGGTGCTGGAGACTGTGACCAAGTG
TCTTTCTTTTGTATCGAAAGGCTGTGTAATCGATATCTAGGATATACTTT
AAATTATGTACTTTAAGGcacaatacacaggttgcaaaattcaAGACTGT
AGACAagtcacgcttttactcgaatttttatgtgcttgttacatgacatc
atagtataagaaagccgctgCTGGAATATGTACCAACCACATTGTCttct
cagttaattgctgttctatctctgtctccgagctttataagaacatcaag
atgctcagtttattattggtagatagcttttgaaatttttctcttaattt
ccttcacaaaaagtttttttattgctagatatctttgaatctgtacccaa
tagaacacttgaactaatttggaCATATAGACCAGCGTCCGTGTTCGATA
ATTCTTTCACttcatattttaggggtattttgtggaaaaaatagtttttc
gccaaaattgagattataagaactatattcaagatgacaactttcttgtc
agtttgaatgataagttttgaaggtgctggcttgaaactttcacagtatt
atctagatgtactttttcattgatttctaaacagatttcactgaaatatt
gcgaaggcattcgaggcactttgtttatttttgatttctttcagcgcagc
cattttgtgcttgtttaaatttcttattgttgatctttcctttacaatga
ttttataatgcaagtgtattatcaagggtatatcattaatgtctaaaaca
ctgagaagtaagtattaacgacaaaccaataaaatttaccattaaagatg
ctacattactgatctcTTGATCtaaaaatagtcatcaaatacgacagaga
tagaacaacagaagttcactcaagtgagttacggcatgtccaaagaaaaa
gtgaaccagttccactcattttcaaaatgtcaaacatagctggaaagaag
cgccttGTGATGTATATCAACGTGAtaggtgttagaaaaatttaacttaa
ggctataagaagttatagcccaaaaacctgtattatgacgtcataaacat
tacataacattacgtcataaaactaaaaatttgaatatctcNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCGTGAACTAAAAGTCATATAaacgtcaaattttgacca
caaatagatattgatgtaagaaaatttctgagttaaaaatcttttgaaaa
aaatgatgacgtcatttattatagccaaaaatcgaaaattgcttaaaaat
gctgacttcatcatttttcaggagatttcgaaaattttactTCTAGAGAA
TTACAATATATTTGTTCTGTCAAAATTACATATTGATATCATTAATAGTT
TATgagttatttaaattttaaatttNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTACATCATATGGCGCTTCTTTtcagctatgtttgacattttgaa
agtgagtggaactggttcacttttaccttggacatgccgtaactcacttg
agcagatgttatcattccagccgcggctttcttatacagggtgtccctaa
ttaaagtatcgagtttgaacatgcgattgagtagaaaagtttgtgtgtgt
taNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNtgtgtgtgttatcgctaaaatataagaacgttctccatcaca
caggcttattacaaaaggtagttacaacgtataaattaatcgtaatgaca
aagaaaaacgagggagagcttaaaatacaattttgtgaatacacacataa
aactttctactcatagttgtgtttcgactggatactttaattagggacac
cctgtactatGATGACATTTACTTCTGACTGGTTAGataatttattgaca
ctaataaatttatcagctgtaagttgtaaagcaagtaacatgggaataaa
atcacgtgaactttttcgagtaatcatatgttttgactgcattgatataa
Nctgtaagttgtaaagcaagtaacatgggaataaaatcacgtgaactttt
tcgagtaatcataTGTTTTGACtacattgatataatttttgcAGCCCGTT
TATTTTGGCGCGCTGTTAAGGGTTGATGTGCGTGTGTTTCCAGGACTTTG
AATTAGATATCTGTGTACTCTCCATGAGGTGAGTACCAATTTGTCAACGA
GACCTAGTTACATTTGATCCACTAATTTCCAACAATTTATTTAGAATGTG
GAATCGAAAGAACTGAAAGAATACGAGATTTGGATCCTCGGTGAAGCAGA
TAAAAATAATGATGGTGAACTTTCAAAAGATGAACTTCGAATGTTATTCT
TCGGTTAAAAACAAGACTCCACGATAAAAAAATATCGTATTTGTATACTG
AGAATTAGCTTTTTATAGAGTAAATTTATAATGTGTTAttaatttttgta
cattttcatATTATTTCAAACTAAATTTTTGACTCTGATACTTCTGTCAA
ATATGCTACATTAATTACCAACTAGTATAATCAACATGGTACATTATAAT
ATTTCGTTCTTATTTctttctttgaagaaaattacTCTTGATTTTAAGAT
GTTATACAACTCAGAGAAATTTAAGGACTCGTTATCTTCATTGAACTACA
AAGAAGccattgattttttctgcaaatattatataattgtttttttgtaa
acttctactatattatatattatatctATATTCTTATAATATTTTGATGA
TTACATCGAGACATCAATAATGCAATAAACATTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031040XLOC_031040Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048839-exon-scaffold_147-1491911889:243628..243652TCONS_00048839-exon-scaffold_147-1491911889:243628..243652Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1510915933:243628..243652TCONS_00048839-exon-scaffold_147-1510915933:243628..243652Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1575043694:243628..243652TCONS_00048839-exon-scaffold_147-1575043694:243628..243652Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1491911889:245890..245979TCONS_00048839-exon-scaffold_147-1491911889:245890..245979Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1510915933:245890..245979TCONS_00048839-exon-scaffold_147-1510915933:245890..245979Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1575043694:245890..245979TCONS_00048839-exon-scaffold_147-1575043694:245890..245979Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1491911889:246903..246959TCONS_00048839-exon-scaffold_147-1491911889:246903..246959Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1510915933:246903..246959TCONS_00048839-exon-scaffold_147-1510915933:246903..246959Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1575043694:246903..246959TCONS_00048839-exon-scaffold_147-1575043694:246903..246959Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1491911889:247230..247289TCONS_00048839-exon-scaffold_147-1491911889:247230..247289Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1510915933:247230..247289TCONS_00048839-exon-scaffold_147-1510915933:247230..247289Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1575043694:247230..247289TCONS_00048839-exon-scaffold_147-1575043694:247230..247289Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1491911889:248477..248532TCONS_00048839-exon-scaffold_147-1491911889:248477..248532Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1510915933:248477..248532TCONS_00048839-exon-scaffold_147-1510915933:248477..248532Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1575043694:248477..248532TCONS_00048839-exon-scaffold_147-1575043694:248477..248532Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1491911889:248749..248791TCONS_00048839-exon-scaffold_147-1491911889:248749..248791Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1510915933:248749..248791TCONS_00048839-exon-scaffold_147-1510915933:248749..248791Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1575043694:248749..248791TCONS_00048839-exon-scaffold_147-1575043694:248749..248791Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1491911889:249020..249073TCONS_00048839-exon-scaffold_147-1491911889:249020..249073Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1510915933:249020..249073TCONS_00048839-exon-scaffold_147-1510915933:249020..249073Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1575043694:249020..249073TCONS_00048839-exon-scaffold_147-1575043694:249020..249073Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1491911889:250022..250093TCONS_00048839-exon-scaffold_147-1491911889:250022..250093Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1510915933:250022..250093TCONS_00048839-exon-scaffold_147-1510915933:250022..250093Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1575043694:250022..250093TCONS_00048839-exon-scaffold_147-1575043694:250022..250093Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1491911889:253322..253861TCONS_00048839-exon-scaffold_147-1491911889:253322..253861Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1510915933:253322..253861TCONS_00048839-exon-scaffold_147-1510915933:253322..253861Clytia hemisphaericaexon
TCONS_00048839-exon-scaffold_147-1575043694:253322..253861TCONS_00048839-exon-scaffold_147-1575043694:253322..253861Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_147supercontigscaffold_147:243628..253861 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0682747	0.016947	0	8.11984e-10	0.0285295	0	0	0.211432	0.245473	0.102717	0.0887326	0.0901083	22.8292	13.7138	0.114744	3.34877e-07	2.29682	1.49373	17.0138	19.366	8.46413	7.42563	6.50119	7.37023	1.80117	3.43584	5.67268	3.09054	30.237	21.461
Blast
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BLAST of TCONS_00048839 vs. Swiss-Prot (Human)
Match: SEGN (Secretagogin OS=Homo sapiens GN=SCGN PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.384e-21
Identity = 57/178 (32.02%), Postives = 99/178 (55.62%), Query Frame = 2 
Query:   59 DFLDVFRKEYKVDA-VTFMKAFEEADEDGNGQISSSELIKFLKALGVDAKET------EELKEHIIELYDKNHDGKLGLTELSKLLQSDQNVLKAFVEGEDLTEEK---FNEVFAHYDRDNGGTINNSELSGFLKDMKSTQDVNVESKELKEYEIWILGEADKNNDGELSKDELRMLF 562
            +FL +FR+E  +D+ V FM+ + + D D +G IS++EL  FL+ L +  K+       EE    +++++D+N DG+L L +L+++L   +N L  F      TEE+   F ++FA+YD    G +   E+ GF+KDM      ++   +L ++   +L   D N DG++ K EL +  
Sbjct:   93 NFLLLFRRENPLDSSVEFMQIWRKYDADSSGFISAAELRNFLRDLFLHHKKAISEAKLEEYTGTMMKIFDRNKDGRLDLNDLARILALQENFLLQFKMDACSTEERKRDFEKIFAYYDVSKTGALEGPEVDGFVKDMMELVQPSISGVDLDKFREILLRHCDVNKDGKIQKSELALCL 270
The following BLAST results are available for this feature:
BLAST of TCONS_00048839 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SEGN2.384e-2132.02Secretagogin OS=Homo sapiens GN=SCGN PE=2 SV=2[more]
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