TCONS_00048833 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048833
Unique NameTCONS_00048833
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1377

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048833 ID=TCONS_00048833|Name=TCONS_00048833|organism=Clytia hemisphaerica|type=transcript|length=1377bp
ggACTTCAATCATCTTTTGGATTGCTTGTTAATCAAATACCCAAAGTTGG
AAGAATCCCAGAAAGTTTTGAACCATTGATATTCCACAAACCTGGGAACG
TGACCTAGAATGATATCAATTTTCAGAGCTTCAATTAgcgaggcatcaag
taccattttgggagaATTTGGTATGACCCTACTGACGGTCGAATCCACAA
CCTTGTGCACCATAGCTGAACATTTCGAAATGTTAATTTAACATTGCAAC
ATTTATGGGCTGACCCACATACCAGAAGAGCGAGATGGGTGCTATAAAAG
AAGCCAGAGAGATGTACTGTCAAATCGTAGAAGATAACAACACTAAACGA
AAGAAGAAATTGTAGCATACCAAAAAGGAAAACTACCTAAACCACTGACA
AAATGGctacaaaatattacaaaaacatGTCCGAAAAAGATTTTCTCGAT
GTTTTCCGTAAAGAATATAAAGTTGATGCCGTCACTTTTATGAAGGCTTT
TGAAGAGGCAGATGAGGATGGCAATGGACAAATTTCTTCTTCAGAACTCA
TTaaatttttaaaagcatTGGGTGTGGACGCCAAAGAAACTGAAGAACTC
AAAGAACACATTATTGAACTATACGACAAAAATCATGATGGAAAACTTGG
GCTAACAGAACTCTCAAAATTATTACAATCTGATCAAAATGTATTGAAAG
CCTTCGTCGAGgGTGAAGACTTAACAGAAGAAAAATTCAATGAAGTTTTT
GCTCACTACGATCGCGATAACGGTGGTACGATCAATAACAGTGAATTGAG
TGGTTTCTTAAAAGATATGAAGTCAACACAAGATGTTAATGTGGAATCGA
AAGAACTGAAAGAATACGAGATTTGGATCCTCGGTGAAGCAGATAAAAAT
AATGATGGTGAACTTTCAAAAGATGAACTTCGAATGTTATTCTTCGGTTA
AAAACAAGACTCCACGATAAAAAAATATCGTATTTGTATACTGAGAATTA
GCTTTTTATAGAGTAAATTTATAATGTGTTAttaatttttgtacattttc
atATTATTTCAAACTAAATTTTTGACTCTGATACTTCTGTCAAATATGCT
ACATTAATTACCAACTAGTATAATCAACATGGTACATTATAATATTTCGT
TCTTATTTctttctttgaagaaaattacTCTTGATTTTAAGATGTTATAC
AACTCAGAGAAATTTAAGGACTCGTTATCTTCATTGAACTACAAAGAAGc
cattgattttttctgcaaatattatataattgtttttttgtaaacttcta
ctatattatatattatatctATATTCTTATAATATTTTGATGATTACATC
GAGACATCAATAATGCAATAAACATTC
Run BLAST on NCBI

protein sequence of TCONS_00048833-protein

>TCONS_00048833-protein ID=TCONS_00048833-protein|Name=TCONS_00048833-protein|organism=Clytia hemisphaerica|type=polypeptide|length=182bp
MATKYYKNMSEKDFLDVFRKEYKVDAVTFMKAFEEADEDGNGQISSSELI
KFLKALGVDAKETEELKEHIIELYDKNHDGKLGLTELSKLLQSDQNVLKA
FVEGEDLTEEKFNEVFAHYDRDNGGTINNSELSGFLKDMKSTQDVNVESK
ELKEYEIWILGEADKNNDGELSKDELRMLFFG
Run BLAST on NCBI

transcript from alignment at scaffold_147:240031..253861+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048833 ID=TCONS_00048833|Name=TCONS_00048833|organism=Clytia hemisphaerica|type=transcript|length=13831bp|location=Sequence derived from alignment at scaffold_147:240031..253861+ (Clytia hemisphaerica)
ggACTTCAATCATCTTTTGGATTGCTTGTTAATCAAATACCCAAAGTTGG
AAGAATCCCAGAAAGTTTTGAACCATTGATATTCCACAAACCTGGGAACG
TGACCTAGAATGATATCAATGTAAGAAGTGCGTTTCTgaaaaaggcttta
aaaatccACGTTGCCTATCTATTCcagtttttagatattttattaATCAT
GAATCCTAATAATTTTAACCTTTCGTaggtttgcgaccgcagtcgagggc
gacccgaaggctcccttttctttAGCTGTCTATCCAAAGGTAGAGGAGGT
TACCATTTCTTTTCCTTGACttttccacttacccttgatccgtctcttca
GTTTCAGAGCTTCAATTAgcgaggcatcaagtaccattttgggagaATTT
GGTATGACCCTACTGACGGTCGAATCCACAACCTTGTGCACCATAGCTGA
GTATGCTACGTAATCACGGTTTCTCGGACGGTAACGCTACACTGTAAtca
cctccgccactgctttCTCCGCCTCGGGCTAACcaacgttttcaaattta
tcccgcctcctaaattattatttttttagtgatcttgtgtagacgatccT
CGTGTATGTAAGACACACCAAAAAAGAATAGTTGTTTTTATGTGCTAAGG
AAGGGTCTATAGCACTATAGCCTTcaattatttagattttttcaaagccg
GCACAATTTTAGATCAGGataatttttgtagatttttataaatttttctg
TCTAAAGCTTCCCCATAAGTAGAGATATATTTTAATATAATGATGTTGCA
TGGGGTGCAAATTAATCAAAAGAGTTGTAAGCTAGCCCGGTCTGTTAATT
TCTCCTTTTAGAAAACTCACAGTTGAACTGCTTTCTTGTTTCTTAGACAT
TTCGAAATATTAATTTAACATTGCAACATTTATGGGCTGACCNTTCTTAG
ACATTTCGAAATGTTAATTTAACATTGCAACATTTATGGGCTGACCCACA
TACCAGAAGAGCGAGATGGGTGCTATAAAAGAAGCCAGAGAGATGTACTG
TCAAATCGTAGAAGATAACAACACTAAACGAAAGAAGAAATTGTAGCATA
CCAAAAAGGAAAACTACCTAAACCACTGACAAAATGGTAAGAAAATTGAT
AAACATTTCAAATAGATTTCTGCAGCTTTCAGGCATCAAAAGACATCGGT
TGCGTGTGTACCAGGGTCGAATGACGTCAAGTTCTTCAATGTAACGATTC
AATACACGTGACACCATGTGGCCCTACTTATCTCGATACAATCCTCTAAC
TTCCAACTAGTTGTAATAGAGGTGCCTTCTTTTAAATTCATtggaatttt
aataaatttctatAGGTTCTTTCAACTATTGGTGAGTCCTATCCTAGTAA
CTCAGTAGCCAGTAGCTTCTTTATTATATCGTATTCCTAAAATGGAAATT
AGAACTTCCGAAAGAAGGAATCGCgcaagaaattttaaaagagaTACAAT
GTTAGGCTTCAAACTGGGTTTAATTTATTAACagtcagattttgaaaaaa
atgtaatacTAAGGTTAGCTTCCTTTGTCTAATGCTCTTTAAATTATTTA
TCATCCTGTGTGATTCCTTTACCGGTCAAACCGGGGGCTATTCCGGGACA
CTTTGATTCAAGGATTAGATTATCAgaattataattttaaaaagtcttTC
CCGAGAACTTCCATACAAAGTTTTAAATTTATACAGAAAGGTTCGTCGGT
CTACTTTATTTAATGTTGACTTGATGTAGAGCAATATAGGTAGAATTGTT
GTAGAGACTTAATtggactaattttcgcgagaattAATTTGGCATTTATA
TTAAAGTTTTCTTTAGTGTAATNAGAGACTTAATTGGACTAATTTTCACG
AGAATTAATTTGGCATTTTCATTAAAGTTTTCTTCAGTGTAATTTCGTCG
AAAACCGAGTATTTGCATAAAATTTGGCAAGACGAAAAGTCGATCAGATA
TATTAGCGATCTGCCTTGGATTTAGGCTCCTTTAATATAGGACTTTAAAA
CATTAGAACTTTGAAATATAGATACAGTCACTCTTTGATTAACTTAATCG
ATTTTAGAACAATTAGGTTAATCTATATGAGGGGCTGACTATCAGAAAAA
TAATCCATTTTTGGTTAATTATTTTTGGTTTCTTGTTAACCAACGTAATT
AAAATTCCGAaattgtaattttctttttggtttgACCTGGACTGCCCAGT
GAACACGATCTTTTTCTCAAGCTAAATGACGCACATTCCTTTAATTCATG
TCTTAGTTAGACGGACGATGTTTTATCGTTTTGAGCCATCCGGGTAGCTT
AGGGGGTGAACGGGTGTTGgaaacaccgaaataccgacgttTTTCTTGGA
TCACCGTCCCACCGACAaccaaaaattgctaaaattctTTCTTTGTTGTA
ACACGGCACGTTTGACAACGTAATATCGTGTCCTTTTATTTTGAACACCG
AAACATCGACGGACTAATACCGTCACATCGCCAAACCCGTATGTATTCTC
CCCCTTTTTAGAACATATATTTCGTGTAATACACTTTTATTATATCAgaa
gaattttaaaagaaaaattaggctcaaaattgccaaaaaataagaacaat
taaagaacaatgctgagcctaaaattactcaaattcaagcaatttagggg
ttaaagtagtaaaaatttgaatataacgCCTAAAATTCCTCAATTGCATC
ttagaaataagaacaggataagaataatttgaggctcaaagtcccaaaaa
ataaatttctggttcttataaaaaaaagtgtattcgattcattaaaataa
atcatTGTTCATCAGTCTTCAAAGTGATCTGTCAACAACTTATGACTTTC
GATGACACACTGTTATAAGATATGACAATAGCAATACCCATTTTACAGAC
AGTCCCGAAATTATTTCATCATGTTTAATTTACTTAGTTACTACAGTATT
TGGTGACAAACGTCTGTATTCAAATGTATTGTATAAATTtgtgtttgctt
gtttttcagATTTGCTAAGATATCGTATCCCATATCTACTTTAGACCCAA
AGAAAGGATTTTTTGTCATATACGTTTTTTCTAttcgtacacgtttttta
cataagaacataaagtATAATAAAAACATAGGGCTTCGAGACtagaaaat
cttaagaacattctaagaacatttcaaggcttaaaacccagaacattaag
gaaacccgaaggcttcaaaaatatctttaacattcttataaaaaacgtgt
acaaaaataataacatcaatATGCTAACGAATTTGGTGTCCTGATTACAT
ATCTAGTTAGTTGGTTATGAAAGGGAAACGCCATCTTTGTATCCAATTAG
AGATCATGTTTGATGGTGTACAAATTGTCGTGGATTGTTTCGATTGTTTT
GCTCTGTCATATATGGGTACTAATAGGACATTCTCTTTCATGATTAATTT
GCGTTTATTGAAGTAGTCCTTGTATCAGGATTGAGTATATTATCCAAGGA
ATGTAAACAGAAAAGCTGTCCTTATCAGCAGAGGACCCACCCAGTCTCAT
AATATTATAAAGTTTATGTGAGGTAGGTCATCCTCACATTGGTAAAACGA
AAATCACATTTGTATGGCTTTGGATGAGGAGGATAATTTCTTAAGTGATG
ATACAGGGTGTTCAATATTGCTCTAAACGTCGTAATCGATTGAATTAGAA
TCTGGTATATTGTCTACTCGTGCCTGAAATGTTTAGGGCATTTTGTTTTG
GAGATGGGGAGAAGCATAGAGATACTAGGTGGTGGTACTCGATCTAGCAT
CGTTAGGAAAAGCTTAAAACAAGCTTATACAGTCGACGCTCTCTAAtccg
atcttcaaggggaattgggttttcattgaataaggtcgaattagagagtg
tcaactgtacaTTCAACATAAAGGATTGGGTCGGTTTCAAAGCGAGAGCA
AGTACAACTTCAGTCGAGGTTGCTTAAATTGAAACAAGGCATTTGCTACG
ATAGTAGATTCTAAAAACAACGATAGACTCTTGGGAAAAATCCCATCTAA
GATTTCTTGATTTTNTCTAAACGTCGTAATCGATTGAATTAGAATCTGGT
ATATTGTCTACTCGTGCCTGAAATGTTTAGGGCATTTTGTTTTGGAGATG
GGGAGAAGCATAGAGATACTAGGTGGTGGTACTCGATCTAGCATCGTTAG
GAAAAGCTTAAAACAAGCTTATACAGTCGACGCTCTCTAAtccgatcttc
aaggggaattgggttttcattgaataaggtcgaattagagagtgtcaact
gtacaTTCAACATAAAGGATTGGGTCGGTTTCAAAGCGAGAGCAAGTACA
ACTTCAGTCGAGGTTGCTTAAATTGAAACAAGGCATTTGCTACGATAGTA
GATTCTAAAAACAACGATAGACTCTTGGGAAAAATCCCATCTAAGATTTC
TTGATTTTCCGTGTTGGCAGATTTACTATGCTATTTGCTATATGACTGTC
AAAAATATATTCTTGTACGAAAAAACTGTTGATTACATATTAATCCTCGT
GATTATCAAATCTTTTCCTTGTTCAAAAAGTTCGAATCTTATTTCAATTT
CATCCTTGGTTTTTTACTCTACTATAAGGTAACTAAATTTGTAGGATACA
ATTTTAAGGATATAATTGTCGTGTTATATAATTATTGTAAACTATAGTTT
TAAACCAGTCTTACCTATTTCTCCCTTTTAAATCGAGTGGTCAAGAGTTT
TGGCCTTACGTTTGGGACTATAATGGTTGATTTTGATGTATACACACGTC
GAAAAAGATTATGGATCGATGTATATTTGGTCACATTTTTGGACCGTGAC
TTATATTTATATTTGGGCTAAGTATTTATGTTTtgggaacaaaaattttt
taaataatattttgacaaaCTTGTTTTGTGTTTCCTTTCGCCATTAAAAG
TGTCGTGACATTTGTTCATAAAACAGCTTTGTGCTTGGGTTTGCCTATGT
GatatttttaatcgaaaatCAGTCACGCATACTAACTTCAACAGCTAGTG
TTTGGAAAATAGACTCAATGAAAGTTAAACCTAGTTACTCTTAACATAGG
GTATGTAAGTCAAGGTCCGATGTTTCTCTTTGGAAATTTCTGGTATGATG
CCTGGACGCCTTTCATATATTAAGTCACCTTAGTCAAATATAACGGCTAA
AATTATTAAAGCCCTTTTTGTGTTTTGTGTGGTTATGGTATCACGTTTTT
GTTAAGGTTTTGCCGTGCTGTTCGTGTTTGCATTCCggtagaaaaaaaag
tttgtttttctctATGATCTAtgggttttcttttttttgtttgttaataT
AGAATATTTCAATCATCTAAAACTAAAAATACCCATGTGAAGCTCTTGGA
TGTTTTCCGTAAAAGCTATATAAAGTGACGCcgtccaaatttgaaatagc
ACTTTTTTCTATAGACTAACCCCTTGATATTTTTAGTAGCAGCCACCAAG
TCGATACCTTCACAATTTGGCATAGCACTTTATTCTACAAGTTAATCTGA
AAACAAGACAGGCTTTTCTCGCAAAACCAACATTTTACGCCAAAGCATAT
CTTCTTTGTTTCCAAAGAAGCCTGTAGAAAAGTACCGTAACGTGGACGAA
GGCTCAAGAAACTCTGTTCATCGTTTCAAGATTCGTTAATATAAGGGAAA
TTTTAAACTCGAAATCCGAATCTAAATGGTTACGAGTGAATGATATTTGA
TCAATAAGAAGAGAACTGAATTTAGTTGTATATCTAATACTTGATGTGTT
TCTTTGTAGGctacaaaatattacaaaaacatGTCCGAAAAAGATTTTCT
CGATGTTTTCCGTAAAGAATATAAAGTTGATGCCGTCACTTTTATGAAGG
TTAGTTGTTTGACTCGCTACAttctacacccccttctcacagacccactg
gatcttcttgtggaaaattatactccaatttttgtccccgctgaaaataa
tcagtcaaggaaatcctcactgcaaaatagtGTGCTATTTTTTCGATCCA
CCCTGAATTTTCTTGCTGGAAAtcataaaagaattgaaatcccaagaatt
gaaaaatatttggttGGTATGCCGGTATTTCATGAAAAGATTACCGGTAT
TCCAGTACTTTTTATCCACGGAAGCCCCTCACTATATATTTGAGGGTACT
TTTAGGCAACTCTgactttcaaatgaaaaaatgagTCACTAgcagaatta
aaaaattaattcatcTCTTCATCCGACTCTTTTCCGGGAAATAACGCTTT
AACAATTCTCGTCATTAGTCCCGGGAATTTAACCTAGATTCCCTTCATTA
TTTCTTGgctattttttatgaataaccGAACTGGACTCGTGTAAAACTGG
AAGGAATTAGCTACAGTTTCATCGAATGTGTTACAATCGTTTAGCTTTAA
ATTCCATGACATTTGTGTATAAGagcacccctgtctcgcagccccgaTCG
AATTTTTCCAACAGCTTGAGATAAAAGTTTTATCGAATTTCCAACGGTGA
TAGAAGCTCTTTTGTTCCAAGCTCAAAAAATCAGAATGGTTTTGGACCGC
aattttttctattgaattttaaatggggATCAAGGGATTCAATCAAAGTC
CTTTTCccaatggggctgaaattgaagggtatttttcccaccggggacca
aatttttgaccaaatttttgaccaaattttccaaTGGTCAGGTTGGAGGT
GACACGGTGGTGTATATGatagattttttttgattttttttttatttctt
actATAATTTTTTACTTTCCAGGCTTTTGAAGAGGCAGATGAGGATGGCA
ATGGACAAATTTCTTCTTCAGAACTCATTGTAAGTTTGCTGTtttaaaac
ttcatcatcattATTGACAGGGAGTCTTTGATAACTGACGGAAAAACGCT
GGAGATTTTAGGAACTTAAACTCTCATATGATTATTTGCAACGAGATCTT
TAAGCCTGATTTTTGGACCTCAAATGTGTTAAAATATgtcaaacgttttt
ttttaattcaatgaTTTTGAAATCCTGTCAGAGATtaaaaatggttgttt
tttgTACCTGGATTGGTTAAATATTCTTATCCACTTTCTTTACAActaga
aatttttaaaagcatTGGGTGTGGACGCCAAAGAAACTGAAGAACTCAAA
GAACACATTGTAAGTAGTGATGCCGGTCACGGTTTTCTTGATCTAGGTCC
CGTAAAAGTATCAATATGAACAACACCTGATTTGTAACTGTTCAAATTAA
GAATGAGctgtacatgtttttcttttatgagAACGTTCAAAGAATTTTTA
ATCTTCGgattttcttagtttttttagttttgcgagatgctcttaaaatg
ttctcatttttttcaccattttgtgagttaTCTTGTGTAATTTCTTATCA
ACTTTCATGTTTTAAAGTCCACAAATCTTCAAAATGTCCTAACTTGCCGA
TAACTTCGTAGccttatgtttttttatattaagAATTTCTTCAAATATAA
CAGACGTCTAAAATCGTTTGGTTGAGCTAGGatctaaaacatttttctgt
GTTCCTAACTGCATCATCCGTTATAACTTACTAGAAAATGTTATAATAGT
GTACAAGCTTCGCTATATTAATTCTAGATTGAACTATACGACAAAAATCA
TGATGGAAAACTTGGGCTAACAGAACTCTCAAAGTAAGTTGTTTAGAATC
TTACCACAAAAGTACCACAAGTTTGACAGCAAAAACTCTGAGGCATTAGG
TATGATCATTTATTTACAAGAAGAACCGTATTTAAAGATGTCTTATTTTG
AAGGTATCTTTTTCTTGTGTTTCATGTGTTTAATCATATCCTTTGCATCG
tattctgaaaatgaataatCAGTAACTTAATTTCGCTTTTCGATTTTAGA
TTATTACAATCTGATCAAAATGTATTGAAAGCCTTCGTCGAGGTAAGTTT
GCTTGTTCTTTTTGCACTATGCTAGATATCCTATCCNTTTCTTTTATGAG
AACGTTCAAAGAATTTTTAATCTTCGgattttcttagtttttttagtttt
gcgagatgctcttaaaatgttctcatttttttcaccattttgtgagttaT
CTTGTGTAATTTCTTATCAACTTTCATGTTTTAAAGTCCACAAATCTTCA
AAATGTCCTAACTTGCCGATAACTTCGTAGccttatgtttttttatatta
agAATTTCTTCAAATATAACAGACGTCTAAAATCGTTTGGTTGAGCTAGG
atctaaaacatttttctgtGTTCCTAACTGCATCATCCGTTATAACTTAC
TAGAAAATGTTATAATAGTGTACAAGCTTCGCTATATTAATTCTAGATTG
AACTATACGACAAAAATCATGATGGAAAACTTGGGCTAACAGAACTCTCA
AAGTAAGTTGTTTAGAATCTTACCACAAAAGTACCACAAGTTTGACAGCA
AAAACTCTGAGGCATTAGGTATGATCATTTATTTACAAGAAGAACCGTAT
TTAAAGATGTCTTATTTTGAAGGTATCTTTTTCTTGTGTTTCATGTGTTT
AATCATATCCTTTGCATCGtattctgaaaatgaataatCAGTAACTTAAT
TTCGCTTTTCGATTTTAGATTATTACAATCTGATCAAAATGTATTGAAAG
CCTTCGTCGAGGTAAGTTTGCTTGTTCTTTTTGCACTATGCTAGATATCC
TATCCAGAACCTCCCTTCCCAATTCGAGATTTTCGAGAGAAAAGAAGTTT
GGGAAGGTTTTAGCCAATCAAACGGCGACTGAAAGCTTATCGACTTTGGC
TTATCATTAAACTGTTAGTTTGTTAGATATTTTCCAGGGAAGTGATATTC
TGTGTCAATGACgagttatcttttttttttcaattccaggGTGAAGACTT
AACAGAAGAAAAATTCAATGAAGTTTTTGCTCACTACGATCGCGTAAGTT
CGACAGACTCTAAGATCGCAGAACTTTTTGCCATTTCCCTAATCATTGAC
TATAAAAGTTTTGTTCGTAAAAAATTATGTGCTGTATTCTTAGTGTGTGT
TACATGCAAACCTGATTAAAATTACTTTAACCGGGCAAATCTTCACGAGA
TTTAATCTTGAGAGCAAAAAATTTGCGAATTTaatttggatttatttttt
gcaggaatttaatttcgcaaatcagCCAAGAAAACTAGCTTAATNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtcggatt
tttcataccaattttgaaaaacaggcggcaacgaagctcgcttcaaagag
acaataaaagatagatgtccagtcgtttatatgttcatggctTAATACAC
CAGATTTTGTAAGATCAGCAAATTAACAGGGATACGAATTTTTAGCCGGa
aataagaatttgaatatttcacgtagatttatttttgcgaGATATTCTTT
TCTCGAAAAAGGCCTAAATTTGCGAAAACAcaaaattaaatccaaaatAC
ATATTAATCCGAATAAAATAGAAGATGTCACTGTTCTTTCATCAATTGAT
AGAATTATTCAAAGTTGAATTTAGCTTATATTTTGCTTCAGGATAACGGT
GGTACGATCAATAACAGTGAATTGAGTGGTTTCTTAAAAGATATGAAGTC
AACACAAGATGTTGTAagtaaaactttcaaatttaaatCATACTATGGGG
TGTACGGGTTTAACCGTGTGGCGGTATTTACCCCTTTTTTCGATCGAGAG
AAAAAGTGACGGTGTTTCGGTATTAAACATGCGGTGACAAAATaacgaat
ttttcgaaaaaaattactGTTGGCGTTGACGATGGTCCAACAAAAATGCG
TACGACCATTATATTCATGGTATTATCCGCGTAATGTTTTTTACGGAAAT
AgtccggtttttgccagtagtgatAAAATTTCAACAGTTTTTCTCTAGTa
tatatttcttaaatttgccactactggcaaagcCGGGGTGTttctgtaga
aaacattacgtttTACGTTATGAATATTACGAATCTATGTTTTCTCGACA
TTTTGTCCTTATAATTAATTTGAAAAGCCTACACCTAAACCTGCTGGTGT
TACCCCTTCAATGAATAAAATACTGTTTGTGACAGTTTTCTACTAAAAAA
TGGGATACTCTCATTGATCCaaagatattcttgttttatGATGTTTATGA
TTTGAAAAGGAGGCGCGCTTCTATACTGGCAAGAGGAATAAAcgaaagaa
tttctcaaaatttgtgatCTTGTGGTGCTGGAGACTGTGACCAAGTGTCT
TTCTTTTGTATCGAAAGGCTGTGTAATCGATATCTAGGATATACTTTAAA
TTATGTACTTTAAGGcacaatacacaggttgcaaaattcaAGACTGTAGA
CAagtcacgcttttactcgaatttttatgtgcttgttacatgacatcata
gtataagaaagccgctgCTGGAATATGTACCAACCACATTGTCttctcag
ttaattgctgttctatctctgtctccgagctttataagaacatcaagatg
ctcagtttattattggtagatagcttttgaaatttttctcttaatttcct
tcacaaaaagtttttttattgctagatatctttgaatctgtacccaatag
aacacttgaactaatttggaCATATAGACCAGCGTCCGTGTTCGATAATT
CTTTCACttcatattttaggggtattttgtggaaaaaatagtttttcgcc
aaaattgagattataagaactatattcaagatgacaactttcttgtcagt
ttgaatgataagttttgaaggtgctggcttgaaactttcacagtattatc
tagatgtactttttcattgatttctaaacagatttcactgaaatattgcg
aaggcattcgaggcactttgtttatttttgatttctttcagcgcagccat
tttgtgcttgtttaaatttcttattgttgatctttcctttacaatgattt
tataatgcaagtgtattatcaagggtatatcattaatgtctaaaacactg
agaagtaagtattaacgacaaaccaataaaatttaccattaaagatgcta
cattactgatctcTTGATCtaaaaatagtcatcaaatacgacagagatag
aacaacagaagttcactcaagtgagttacggcatgtccaaagaaaaagtg
aaccagttccactcattttcaaaatgtcaaacatagctggaaagaagcgc
cttGTGATGTATATCAACGTGAtaggtgttagaaaaatttaacttaaggc
tataagaagttatagcccaaaaacctgtattatgacgtcataaacattac
ataacattacgtcataaaactaaaaatttgaatatctcNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCGTGAACTAAAAGTCATATAaacgtcaaattttgaccacaa
atagatattgatgtaagaaaatttctgagttaaaaatcttttgaaaaaaa
tgatgacgtcatttattatagccaaaaatcgaaaattgcttaaaaatgct
gacttcatcatttttcaggagatttcgaaaattttactTCTAGAGAATTA
CAATATATTTGTTCTGTCAAAATTACATATTGATATCATTAATAGTTTAT
gagttatttaaattttaaatttNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTACATCATATGGCGCTTCTTTtcagctatgtttgacattttgaaagt
gagtggaactggttcacttttaccttggacatgccgtaactcacttgagc
agatgttatcattccagccgcggctttcttatacagggtgtccctaatta
aagtatcgagtttgaacatgcgattgagtagaaaagtttgtgtgtgttaN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNtgtgtgtgttatcgctaaaatataagaacgttctccatcacacag
gcttattacaaaaggtagttacaacgtataaattaatcgtaatgacaaag
aaaaacgagggagagcttaaaatacaattttgtgaatacacacataaaac
tttctactcatagttgtgtttcgactggatactttaattagggacaccct
gtactatGATGACATTTACTTCTGACTGGTTAGataatttattgacacta
ataaatttatcagctgtaagttgtaaagcaagtaacatgggaataaaatc
acgtgaactttttcgagtaatcatatgttttgactgcattgatataaNct
gtaagttgtaaagcaagtaacatgggaataaaatcacgtgaactttttcg
agtaatcataTGTTTTGACtacattgatataatttttgcAGCCCGTTTAT
TTTGGCGCGCTGTTAAGGGTTGATGTGCGTGTGTTTCCAGGACTTTGAAT
TAGATATCTGTGTACTCTCCATGAGGTGAGTACCAATTTGTCAACGAGAC
CTAGTTACATTTGATCCACTAATTTCCAACAATTTATTTAGAATGTGGAA
TCGAAAGAACTGAAAGAATACGAGATTTGGATCCTCGGTGAAGCAGATAA
AAATAATGATGGTGAACTTTCAAAAGATGAACTTCGAATGTTATTCTTCG
GTTAAAAACAAGACTCCACGATAAAAAAATATCGTATTTGTATACTGAGA
ATTAGCTTTTTATAGAGTAAATTTATAATGTGTTAttaatttttgtacat
tttcatATTATTTCAAACTAAATTTTTGACTCTGATACTTCTGTCAAATA
TGCTACATTAATTACCAACTAGTATAATCAACATGGTACATTATAATATT
TCGTTCTTATTTctttctttgaagaaaattacTCTTGATTTTAAGATGTT
ATACAACTCAGAGAAATTTAAGGACTCGTTATCTTCATTGAACTACAAAG
AAGccattgattttttctgcaaatattatataattgtttttttgtaaact
tctactatattatatattatatctATATTCTTATAATATTTTGATGATTA
CATCGAGACATCAATAATGCAATAAACATTC

Coding sequence (CDS) from alignment at scaffold_147:240031..253861+

>TCONS_00048833 ID=TCONS_00048833|Name=TCONS_00048833|organism=Clytia hemisphaerica|type=CDS|length=4941bp|location=Sequence derived from alignment at scaffold_147:240031..253861+ (Clytia hemisphaerica)
ATGGctacaaaatattacaaaaacatGTCCGAAAAAGATTTTCTCGATGT
TTTCCGTAAAGAATATAAAGTTGATGCCGTCACTTTTATGAAGGCTTTTG
AAGAGGCAGATGAGGATGGCAATGGACAAATTTCTTCTTCAGAACTCATT
aaatttttaaaagcatTGGGTGTGGACGCCAAAGAAACTGAAGAACTCAA
AGAACACATTATTGAACTATACGACAAAAATCATGATGGAAAACTTGGGC
TAACAGAACTCTCAAAATTATTACAATCTGATCAAAATGTATTGAAAGCC
TTCGTCGAGgGTGAAGACTTAACAGAAGAAAAATTCAATGAAGTTTTTGC
TCACTACGATCGCGATAACGGTGGTACGATCAATAACAGTGAATTGAGTG
GTTTCTTAAAAGATATGAAGTCAACACAAGATGTTAATGTGGAATCGAAA
GAACTGAAAGAATACGAGATTTGGATCCTCGGTGAAGCAGATAAAAATAA
TGATGGTGAACTTTCAAAAGATGAACTTCGAATGTTATTCTTCGGTTAAA
TGGctacaaaatattacaaaaacatGTCCGAAAAAGATTTTCTCGATGTT
TTCCGTAAAGAATATAAAGTTGATGCCGTCACTTTTATGAAGGCTTTTGA
AGAGGCAGATGAGGATGGCAATGGACAAATTTCTTCTTCAGAACTCATTa
aatttttaaaagcatTGGGTGTGGACGCCAAAGAAACTGAAGAACTCAAA
GAACACATTATTGAACTATACGACAAAAATCATGATGGAAAACTTGGGCT
AACAGAACTCTCAAAATTATTACAATCTGATCAAAATGTATTGAAAGCCT
TCGTCGAGgGTGAAGACTTAACAGAAGAAAAATTCAATGAAGTTTTTGCT
CACTACGATCGCGATAACGGTGGTACGATCAATAACAGTGAATTGAGTGG
TTTCTTAAAAGATATGAAGTCAACACAAGATGTTAATGTGGAATCGAAAG
AACTGAAAGAATACGAGATTTGGATCCTCGGTGAAGCAGATAAAAATAAT
GATGGTGAACTTTCAAAAGATGAACTTCGAATGTTATTCTTCGGTTAAAT
GGctacaaaatattacaaaaacatGTCCGAAAAAGATTTTCTCGATGTTT
TCCGTAAAGAATATAAAGTTGATGCCGTCACTTTTATGAAGGCTTTTGAA
GAGGCAGATGAGGATGGCAATGGACAAATTTCTTCTTCAGAACTCATTaa
atttttaaaagcatTGGGTGTGGACGCCAAAGAAACTGAAGAACTCAAAG
AACACATTATTGAACTATACGACAAAAATCATGATGGAAAACTTGGGCTA
ACAGAACTCTCAAAATTATTACAATCTGATCAAAATGTATTGAAAGCCTT
CGTCGAGgGTGAAGACTTAACAGAAGAAAAATTCAATGAAGTTTTTGCTC
ACTACGATCGCGATAACGGTGGTACGATCAATAACAGTGAATTGAGTGGT
TTCTTAAAAGATATGAAGTCAACACAAGATGTTAATGTGGAATCGAAAGA
ACTGAAAGAATACGAGATTTGGATCCTCGGTGAAGCAGATAAAAATAATG
ATGGTGAACTTTCAAAAGATGAACTTCGAATGTTATTCTTCGGTTAAATG
GctacaaaatattacaaaaacatGTCCGAAAAAGATTTTCTCGATGTTTT
CCGTAAAGAATATAAAGTTGATGCCGTCACTTTTATGAAGGCTTTTGAAG
AGGCAGATGAGGATGGCAATGGACAAATTTCTTCTTCAGAACTCATTaaa
tttttaaaagcatTGGGTGTGGACGCCAAAGAAACTGAAGAACTCAAAGA
ACACATTATTGAACTATACGACAAAAATCATGATGGAAAACTTGGGCTAA
CAGAACTCTCAAAATTATTACAATCTGATCAAAATGTATTGAAAGCCTTC
GTCGAGgGTGAAGACTTAACAGAAGAAAAATTCAATGAAGTTTTTGCTCA
CTACGATCGCGATAACGGTGGTACGATCAATAACAGTGAATTGAGTGGTT
TCTTAAAAGATATGAAGTCAACACAAGATGTTAATGTGGAATCGAAAGAA
CTGAAAGAATACGAGATTTGGATCCTCGGTGAAGCAGATAAAAATAATGA
TGGTGAACTTTCAAAAGATGAACTTCGAATGTTATTCTTCGGTTAAATGG
ctacaaaatattacaaaaacatGTCCGAAAAAGATTTTCTCGATGTTTTC
CGTAAAGAATATAAAGTTGATGCCGTCACTTTTATGAAGGCTTTTGAAGA
GGCAGATGAGGATGGCAATGGACAAATTTCTTCTTCAGAACTCATTaaat
ttttaaaagcatTGGGTGTGGACGCCAAAGAAACTGAAGAACTCAAAGAA
CACATTATTGAACTATACGACAAAAATCATGATGGAAAACTTGGGCTAAC
AGAACTCTCAAAATTATTACAATCTGATCAAAATGTATTGAAAGCCTTCG
TCGAGgGTGAAGACTTAACAGAAGAAAAATTCAATGAAGTTTTTGCTCAC
TACGATCGCGATAACGGTGGTACGATCAATAACAGTGAATTGAGTGGTTT
CTTAAAAGATATGAAGTCAACACAAGATGTTAATGTGGAATCGAAAGAAC
TGAAAGAATACGAGATTTGGATCCTCGGTGAAGCAGATAAAAATAATGAT
GGTGAACTTTCAAAAGATGAACTTCGAATGTTATTCTTCGGTTAAATGGc
tacaaaatattacaaaaacatGTCCGAAAAAGATTTTCTCGATGTTTTCC
GTAAAGAATATAAAGTTGATGCCGTCACTTTTATGAAGGCTTTTGAAGAG
GCAGATGAGGATGGCAATGGACAAATTTCTTCTTCAGAACTCATTaaatt
tttaaaagcatTGGGTGTGGACGCCAAAGAAACTGAAGAACTCAAAGAAC
ACATTATTGAACTATACGACAAAAATCATGATGGAAAACTTGGGCTAACA
GAACTCTCAAAATTATTACAATCTGATCAAAATGTATTGAAAGCCTTCGT
CGAGgGTGAAGACTTAACAGAAGAAAAATTCAATGAAGTTTTTGCTCACT
ACGATCGCGATAACGGTGGTACGATCAATAACAGTGAATTGAGTGGTTTC
TTAAAAGATATGAAGTCAACACAAGATGTTAATGTGGAATCGAAAGAACT
GAAAGAATACGAGATTTGGATCCTCGGTGAAGCAGATAAAAATAATGATG
GTGAACTTTCAAAAGATGAACTTCGAATGTTATTCTTCGGTTAAATGGct
acaaaatattacaaaaacatGTCCGAAAAAGATTTTCTCGATGTTTTCCG
TAAAGAATATAAAGTTGATGCCGTCACTTTTATGAAGGCTTTTGAAGAGG
CAGATGAGGATGGCAATGGACAAATTTCTTCTTCAGAACTCATTaaattt
ttaaaagcatTGGGTGTGGACGCCAAAGAAACTGAAGAACTCAAAGAACA
CATTATTGAACTATACGACAAAAATCATGATGGAAAACTTGGGCTAACAG
AACTCTCAAAATTATTACAATCTGATCAAAATGTATTGAAAGCCTTCGTC
GAGgGTGAAGACTTAACAGAAGAAAAATTCAATGAAGTTTTTGCTCACTA
CGATCGCGATAACGGTGGTACGATCAATAACAGTGAATTGAGTGGTTTCT
TAAAAGATATGAAGTCAACACAAGATGTTAATGTGGAATCGAAAGAACTG
AAAGAATACGAGATTTGGATCCTCGGTGAAGCAGATAAAAATAATGATGG
TGAACTTTCAAAAGATGAACTTCGAATGTTATTCTTCGGTTAAATGGcta
caaaatattacaaaaacatGTCCGAAAAAGATTTTCTCGATGTTTTCCGT
AAAGAATATAAAGTTGATGCCGTCACTTTTATGAAGGCTTTTGAAGAGGC
AGATGAGGATGGCAATGGACAAATTTCTTCTTCAGAACTCATTaaatttt
taaaagcatTGGGTGTGGACGCCAAAGAAACTGAAGAACTCAAAGAACAC
ATTATTGAACTATACGACAAAAATCATGATGGAAAACTTGGGCTAACAGA
ACTCTCAAAATTATTACAATCTGATCAAAATGTATTGAAAGCCTTCGTCG
AGgGTGAAGACTTAACAGAAGAAAAATTCAATGAAGTTTTTGCTCACTAC
GATCGCGATAACGGTGGTACGATCAATAACAGTGAATTGAGTGGTTTCTT
AAAAGATATGAAGTCAACACAAGATGTTAATGTGGAATCGAAAGAACTGA
AAGAATACGAGATTTGGATCCTCGGTGAAGCAGATAAAAATAATGATGGT
GAACTTTCAAAAGATGAACTTCGAATGTTATTCTTCGGTTAAATGGctac
aaaatattacaaaaacatGTCCGAAAAAGATTTTCTCGATGTTTTCCGTA
AAGAATATAAAGTTGATGCCGTCACTTTTATGAAGGCTTTTGAAGAGGCA
GATGAGGATGGCAATGGACAAATTTCTTCTTCAGAACTCATTaaattttt
aaaagcatTGGGTGTGGACGCCAAAGAAACTGAAGAACTCAAAGAACACA
TTATTGAACTATACGACAAAAATCATGATGGAAAACTTGGGCTAACAGAA
CTCTCAAAATTATTACAATCTGATCAAAATGTATTGAAAGCCTTCGTCGA
GgGTGAAGACTTAACAGAAGAAAAATTCAATGAAGTTTTTGCTCACTACG
ATCGCGATAACGGTGGTACGATCAATAACAGTGAATTGAGTGGTTTCTTA
AAAGATATGAAGTCAACACAAGATGTTAATGTGGAATCGAAAGAACTGAA
AGAATACGAGATTTGGATCCTCGGTGAAGCAGATAAAAATAATGATGGTG
AACTTTCAAAAGATGAACTTCGAATGTTATTCTTCGGTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031040XLOC_031040Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048833-exon-scaffold_147-1491911889:240031..240150TCONS_00048833-exon-scaffold_147-1491911889:240031..240150Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1510915933:240031..240150TCONS_00048833-exon-scaffold_147-1510915933:240031..240150Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1575043694:240031..240150TCONS_00048833-exon-scaffold_147-1575043694:240031..240150Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1491911889:240382..240480TCONS_00048833-exon-scaffold_147-1491911889:240382..240480Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1510915933:240382..240480TCONS_00048833-exon-scaffold_147-1510915933:240382..240480Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1575043694:240382..240480TCONS_00048833-exon-scaffold_147-1575043694:240382..240480Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1491911889:240981..241166TCONS_00048833-exon-scaffold_147-1491911889:240981..241166Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1510915933:240981..241166TCONS_00048833-exon-scaffold_147-1510915933:240981..241166Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1575043694:240981..241166TCONS_00048833-exon-scaffold_147-1575043694:240981..241166Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1491911889:245890..245979TCONS_00048833-exon-scaffold_147-1491911889:245890..245979Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1510915933:245890..245979TCONS_00048833-exon-scaffold_147-1510915933:245890..245979Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1575043694:245890..245979TCONS_00048833-exon-scaffold_147-1575043694:245890..245979Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1491911889:246903..246959TCONS_00048833-exon-scaffold_147-1491911889:246903..246959Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1510915933:246903..246959TCONS_00048833-exon-scaffold_147-1510915933:246903..246959Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1575043694:246903..246959TCONS_00048833-exon-scaffold_147-1575043694:246903..246959Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1491911889:247230..247289TCONS_00048833-exon-scaffold_147-1491911889:247230..247289Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1510915933:247230..247289TCONS_00048833-exon-scaffold_147-1510915933:247230..247289Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1575043694:247230..247289TCONS_00048833-exon-scaffold_147-1575043694:247230..247289Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1491911889:247758..247813TCONS_00048833-exon-scaffold_147-1491911889:247758..247813Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1510915933:247758..247813TCONS_00048833-exon-scaffold_147-1510915933:247758..247813Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1575043694:247758..247813TCONS_00048833-exon-scaffold_147-1575043694:247758..247813Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1491911889:248749..248791TCONS_00048833-exon-scaffold_147-1491911889:248749..248791Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1510915933:248749..248791TCONS_00048833-exon-scaffold_147-1510915933:248749..248791Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1575043694:248749..248791TCONS_00048833-exon-scaffold_147-1575043694:248749..248791Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1491911889:249020..249073TCONS_00048833-exon-scaffold_147-1491911889:249020..249073Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1510915933:249020..249073TCONS_00048833-exon-scaffold_147-1510915933:249020..249073Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1575043694:249020..249073TCONS_00048833-exon-scaffold_147-1575043694:249020..249073Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1491911889:250022..250093TCONS_00048833-exon-scaffold_147-1491911889:250022..250093Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1510915933:250022..250093TCONS_00048833-exon-scaffold_147-1510915933:250022..250093Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1575043694:250022..250093TCONS_00048833-exon-scaffold_147-1575043694:250022..250093Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1491911889:253322..253861TCONS_00048833-exon-scaffold_147-1491911889:253322..253861Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1510915933:253322..253861TCONS_00048833-exon-scaffold_147-1510915933:253322..253861Clytia hemisphaericaexon
TCONS_00048833-exon-scaffold_147-1575043694:253322..253861TCONS_00048833-exon-scaffold_147-1575043694:253322..253861Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048833-proteinTCONS_00048833-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_147supercontigscaffold_147:240031..253861 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.662683	0.758692	0.275135	0.134588	0.335733	0.136237	0	0.149826	0.209797	0.194892	0.0647634	0.235906	0.170055	0.397359	0.181304	0.222425	0.19195	0.323608	0.203857	0.0711074	0.494442	0.180879	0.659645	0.799617	0.549058	0.41945	0.613566	0.280635	0.212852	0.722873
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR007736Caleosin-related
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
Blast
[Close]
BLAST of TCONS_00048833 vs. Swiss-Prot (Human)
Match: SEGN (Secretagogin OS=Homo sapiens GN=SCGN PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 8.501e-21
Identity = 57/180 (31.67%), Postives = 101/180 (56.11%), Query Frame = 1 
Query:  433 EKDFLDVFRKEYKVDA-VTFMKAFEEADEDGNGQISSSELIKFLKALGVDAKET------EELKEHIIELYDKNHDGKLGLTELSKLLQSDQNVLKAFVEGEDLTEEK---FNEVFAHYDRDNGGTINNSELSGFLKDMKSTQDVNVESKELKEYEIWILGEADKNNDGELSKDELRMLF 942
            +++FL +FR+E  +D+ V FM+ + + D D +G IS++EL  FL+ L +  K+       EE    +++++D+N DG+L L +L+++L   +N L  F      TEE+   F ++FA+YD    G +   E+ GF+KDM      ++   +L ++   +L   D N DG++ K EL +  
Sbjct:   91 DENFLLLFRRENPLDSSVEFMQIWRKYDADSSGFISAAELRNFLRDLFLHHKKAISEAKLEEYTGTMMKIFDRNKDGRLDLNDLARILALQENFLLQFKMDACSTEERKRDFEKIFAYYDVSKTGALEGPEVDGFVKDMMELVQPSISGVDLDKFREILLRHCDVNKDGKIQKSELALCL 270
The following BLAST results are available for this feature:
BLAST of TCONS_00048833 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SEGN8.501e-2131.67Secretagogin OS=Homo sapiens GN=SCGN PE=2 SV=2[more]
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