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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048813 ID=TCONS_00048813|Name=TCONS_00048813|organism=Clytia hemisphaerica|type=transcript|length=914bp
CTGGTCATCAAAACCATGTAATTCATTATCATTGTTGGTGTTTGGTTCAG
CGTTCCACTCACGTAGAGTATTTTTGGCTTTCTCCAATACTGGAATTTTT
CGAAAACATGCTCTACAAATTGTTTCGGCTTTGTTGGTGCCTTGTTCTAG
TTCGATTCCAGTCACATTAAAAATCctagtttttaaattttcattctcgt
ctgattttcttttataaatatTATGTCTCGCAGCTCTACTCGTTTCAGTG
TCTTTGTAAGGTTCCTTACATAATCTACAAAACGACATgattattattta
aaaattttcttttttctttccatcttctttactttccaaaaaaaatttct
actttcactttcatttttgcaattttttttcgcgcgtaAATCAAAGACTA
TTTTCATCGATAATaataaactaatttctcaattatatcaaaccattttt
gcttaaaattacaAAGTCATTAGACAAATAATTTTGCATTTGTTTTATTA
CTAAGATTTGGGCCAGCTATTACTTAAATAGTCTTAAAAGTCTATAAAGA
CGACTGCTAGTACCTACTTTGCTCTGTCATCCAGTGGAATTACTGTTAGG
GGGTAACAACATAAACATTTTCCTAAGCTACTCAGAGATCTTTCAATATT
TATCACCCCCTGTAATCATTGGTTGCACAGGGAATATGTTAGTAAAAGta
atatttctaatttttaaacTAAGGGGATAGACCAGGCATTTGTAAACAAG
ATTAGACGATTGCAAAGTGAAAGTGATGGGGGGACAAGATAAAATGGCTG
TTGATTTATAGCTGGGTGCATCTTGTTTGCTTGTATTTTCTACAAAATCT
TGGCCGTTTTCGTCCTCCGAAGAAGTGATCATGAATGTTAAAGTACTTTT
GTAGGTAAGTTTNN Run BLAST on NCBI transcript from alignment at scaffold_146:471696..472609 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048813 ID=TCONS_00048813|Name=TCONS_00048813|organism=Clytia hemisphaerica|type=transcript|length=914bp|location=Sequence derived from alignment at scaffold_146:471696..472609 (Clytia hemisphaerica)
NNAAACTTACCTACAAAAGTACTTTAACATTCATGATCACTTCTTCGGAG
GACGAAAACGGCCAAGATTTTGTAGAAAATACAAGCAAACAAGATGCACC
CAGCTATAAATCAACAGCCATTTTATCTTGTCCCCCCATCACTTTCACTT
TGCAATCGTCTAATCTTGTTTACAAATGCCTGGTCTATCCCCTTAgttta
aaaattagaaatattaCTTTTACTAACATATTCCCTGTGCAACCAATGAT
TACAGGGGGTGATAAATATTGAAAGATCTCTGAGTAGCTTAGGAAAATGT
TTATGTTGTTACCCCCTAACAGTAATTCCACTGGATGACAGAGCAAAGTA
GGTACTAGCAGTCGTCTTTATAGACTTTTAAGACTATTTAAGTAATAGCT
GGCCCAAATCTTAGTAATAAAACAAATGCAAAATTATTTGTCTAATGACT
Ttgtaattttaagcaaaaatggtttgatataattgagaaattagtttatt
ATTATCGATGAAAATAGTCTTTGATTtacgcgcgaaaaaaaattgcaaaa
atgaaagtgaaagtagaaattttttttggaaagtaaagaagatggaaaga
aaaaagaaaatttttaaataataatcATGTCGTTTTGTAGATTATGTAAG
GAACCTTACAAAGACACTGAAACGAGTAGAGCTGCGAGACATAatattta
taaaagaaaatcagacgagaatgaaaatttaaaaactagGATTTTTAATG
TGACTGGAATCGAACTAGAACAAGGCACCAACAAAGCCGAAACAATTTGT
AGAGCATGTTTTCGAAAAATTCCAGTATTGGAGAAAGCCAAAAATACTCT
ACGTGAGTGGAACGCTGAACCAAACACCAACAATGATAATGAATTACATG
GTTTTGATGACCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048813-exon-scaffold_146-1491911889:471696..472609 | TCONS_00048813-exon-scaffold_146-1491911889:471696..472609 | Clytia hemisphaerica | exon |
| TCONS_00048813-exon-scaffold_146-1510915933:471696..472609 | TCONS_00048813-exon-scaffold_146-1510915933:471696..472609 | Clytia hemisphaerica | exon |
| TCONS_00048813-exon-scaffold_146-1575043694:471696..472609 | TCONS_00048813-exon-scaffold_146-1575043694:471696..472609 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_146 | supercontig | scaffold_146:471696..472609 . |
Blast
The following BLAST results are available for this feature:
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