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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048752 ID=TCONS_00048752|Name=TCONS_00048752|organism=Clytia hemisphaerica|type=transcript|length=745bp
CTAATTCATTCATTTCTGTCTCTATAAAATTGGGTTGGATGGGTTTAACT
CTAGGCAATTGGAAAGtacaaaaacttttataaattattttttgaagtaA
TAAGTAATATATTGAAAATacaaatgcaaaaaaatatgaattaCAAAAGT
CTAAGATTTCGCCCAGTGGCTGTTTCAACGTCCAACTAGCCTTCAAAATT
GGACTTCGCCGCTCCAAATTTTGCAGTTAGAAATGATAGATATATTTGAT
CAAATATTGTGTATATAAAATACGAAATGTTTTTATCaacaaattttctg
ttttgttttaacGGGTACATTTATTTTAATAATTCAATTCATAATGGGCT
CCTCATAATTTAATTCATACTGGGCACCTCAGTTTAATTCATACTGGGCA
CCTCAGTTTAATTCAATAATGGGCACCTCAAAATGCAATTTATAATTGGC
ACCTCACAGTTTAATTTATACTGGACACCTCAGTTCAATTCTTACTGGGC
ATTTCACAAATTCTGACAAAGTGATTGATCTCGCGATACGAATTCTCTGG
GACTCTTTCTCCATTACCATCTGAGTAAGGGACAACAGGAAAAATAGCAA
ATCTGTGATTATCCATTCTGCGAAAGACGAACCAAACATtccaattattt
ttcaataaatctcCTGGAAGAACTTTTCCCATTGAAAAGCACAGATCAAC
AGAGCTGTGATTCTGACAATTTTTGCATGCGCTTTTGTCCCAtct Run BLAST on NCBI transcript from alignment at scaffold_146:278705..279658- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048752 ID=TCONS_00048752|Name=TCONS_00048752|organism=Clytia hemisphaerica|type=transcript|length=954bp|location=Sequence derived from alignment at scaffold_146:278705..279658- (Clytia hemisphaerica)
CTAATTCATTCATTTCTGTCTCTATAAAATTGGGTTGGATGGGTTTAACT
CTAGGCAATTGGAAAGTACAAAAACTTTTATAAATTATTTTTTGAAGTAA
TAAGTAATATATTGAAAATACAAATGCAAAAAAATATGAATTACAAAAGT
CTAAGATTTCGCCCAGTGGCTGTTTCAACGTCCAACTAGCCTTCAAAATT
GGACTTCGCCGCTCCAAATTTTGCAGTTAGAAATGATAGATATATTTGAT
CAAATATTGTGTATATAAAATACGAAATGTTTTTATCAACAAATTTTCTG
TTTTGTTTTAACGGGTACATTTATTTTAATAATTCAATTCATAATGGGCT
CCTCATAATTTAATTCATACTGGGCACCTCATAATTTAATTCATATTGGG
CACCTCACAGTTTAATTTATACTGGGCACCTCATAATGCAATTTATAATT
GGCACCTCACAGTTTAATTCATACTGGGCACTTCATAATTTAATTCATAT
TGGGCACCTCACAATTTAATTCATACTGGGCACCTCAGTTTAATTCAATA
ATGGGCACCTCAAAATGCAATTTATAATTGGCACCTCACAGTTTAATTCA
TACTGGGCACCTCAGTTTAATTCAATAATGGGCACCTCAAAATGCAATTT
ATAATTGGCACCTCACAGTTTAATTTATACTGGACACCTCAGTTCAATTC
TTACTGGGCATTTCACAAATTCTGACAAAGTGATTGATCTCGCGATACGA
ATTCTCTGGGACTCTTTCTCCATTACCATCTGAGTAAGGGACAACAGGAA
AAATAGCAAATCTGTGATTATCCATTCTGCGAAAGACGAACCAAACATTC
CAATTATTTTTCAATAAATCTCCTGGAAGAACTTTTCCCATTGAAAAGCA
CAGATCAACAGAGCTGTGATTCTGACAATTTTTGCATGCGCTTTTGTCCC
ATCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048752-exon-scaffold_146-1575043694:279279..279658 | TCONS_00048752-exon-scaffold_146-1575043694:279279..279658 | Clytia hemisphaerica | exon |
| TCONS_00048752-exon-scaffold_146-1575043694:278705..279069 | TCONS_00048752-exon-scaffold_146-1575043694:278705..279069 | Clytia hemisphaerica | exon |
| TCONS_00048752-exon-scaffold_146-1510915933:279279..279658 | TCONS_00048752-exon-scaffold_146-1510915933:279279..279658 | Clytia hemisphaerica | exon |
| TCONS_00048752-exon-scaffold_146-1510915933:278705..279069 | TCONS_00048752-exon-scaffold_146-1510915933:278705..279069 | Clytia hemisphaerica | exon |
| TCONS_00048752-exon-scaffold_146-1491911889:279279..279658 | TCONS_00048752-exon-scaffold_146-1491911889:279279..279658 | Clytia hemisphaerica | exon |
| TCONS_00048752-exon-scaffold_146-1491911889:278705..279069 | TCONS_00048752-exon-scaffold_146-1491911889:278705..279069 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_146 | supercontig | scaffold_146:278705..279658 - |
Blast
The following BLAST results are available for this feature:
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