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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048593 ID=TCONS_00048593|Name=TCONS_00048593|organism=Clytia hemisphaerica|type=transcript|length=157bp
TCCAACGGCACTCCCTCCTTTCCTCGCTTACTCCATGAAGGGAGCTGCAA
GGGGCAAGAATTTAGTGTACGCAAATTTTGGCCGCGATCAAGATTACCAA
AAGTTGATTGAACTGAAAATCAACGTCACTGATTGTATTGTTTTGACCAA
ATATGGT Run BLAST on NCBI transcript from alignment at scaffold_144:42477..43382+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048593 ID=TCONS_00048593|Name=TCONS_00048593|organism=Clytia hemisphaerica|type=transcript|length=906bp|location=Sequence derived from alignment at scaffold_144:42477..43382+ (Clytia hemisphaerica)
TCCAACGGCACTCCCTCCTTTCCTCGCTTACTCCATGAAGGGAGCTGCAA
GGGTGAGAttataaccattgagtttcaataaTCCAACGGTACTCCCATCT
TTCCTCGCTTACTCAATGAAGGGGGAAGAAAGGGTGACATTATAATCATA
ATTCCCAACACAATAACGTCTTCTCTGTCCATAACATagacaatatttta
taaatctaaattatttcgtagaCGTCGATAGACCTgtaaaatataattct
atgaataagcGAGCCGCGAAACCACTTTAGGATAtaggcttcaaatccta
taTACGAATTTCGATTCAAACCCTCTGCTGTACCTTATTCATTATAACCT
ATACTTGAACACTTTTGCATCGCTCATTTCAAAGTGCGGCCTGCGTTTCA
GGGAACTTGTCAGGGAATCACATTTATCCCTCgcataaaagaaaaaaagc
gcccaaatacacaggttgcaaaattaaagtctgaagaaaATCACGCCTTT
ACTCGAAAATTTTATGTGCTTTCTACaagacatttatttctgattggttc
gaatttattgacactaataaagttatcagctgtaagttgtaaagcaagta
aattgggaataaaatcacatgttttgactacATTCATATAactttgcaac
ccgtgtattcacTATTTTGTCAAATAACTTTTCCATTTGTGATTGTGTCC
CGGGGATGggctacttaggcaaaaatgggtgctgggtatctGCAGACGGT
AAAAGTCGGTTGTTTTACCTTTGATCATGAAAAATTATATCCATTTTATA
GGGCAAGAATTTAGTGTACGCAAATTTTGGCCGCGATCAAGATTACCAAA
AGTTGATTGAACTGAAAATCAACGTCACTGATTGTATTGTTTTGACCAAA
TATGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048593-exon-scaffold_144-1491911889:42477..42528 | TCONS_00048593-exon-scaffold_144-1491911889:42477..42528 | Clytia hemisphaerica | exon |
| TCONS_00048593-exon-scaffold_144-1510915933:42477..42528 | TCONS_00048593-exon-scaffold_144-1510915933:42477..42528 | Clytia hemisphaerica | exon |
| TCONS_00048593-exon-scaffold_144-1575043694:42477..42528 | TCONS_00048593-exon-scaffold_144-1575043694:42477..42528 | Clytia hemisphaerica | exon |
| TCONS_00048593-exon-scaffold_144-1491911889:43278..43382 | TCONS_00048593-exon-scaffold_144-1491911889:43278..43382 | Clytia hemisphaerica | exon |
| TCONS_00048593-exon-scaffold_144-1510915933:43278..43382 | TCONS_00048593-exon-scaffold_144-1510915933:43278..43382 | Clytia hemisphaerica | exon |
| TCONS_00048593-exon-scaffold_144-1575043694:43278..43382 | TCONS_00048593-exon-scaffold_144-1575043694:43278..43382 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_144 | supercontig | scaffold_144:42477..43382 + |
Blast
The following BLAST results are available for this feature:
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