TCONS_00048409 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048409
Unique NameTCONS_00048409
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2348

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048409 ID=TCONS_00048409|Name=TCONS_00048409|organism=Clytia hemisphaerica|type=transcript|length=2348bp
GAAGAATCTGGATCGAAATGCTTTTTACATCTGCCTGAAGGCTTTATAAT
TAATTGATCGTAGACTTTGGCAGACCATGAGTGTTTTCTGACCAACACGC
TGAAGCTCTTAAAGAGATagatgaaaacaaacaatctgacgaattaGCTA
TCAAACTCATATTTCGTACAACAAACTTCACTCGAAGAAAACAACACAAA
CGTCGCCATGTTGGATCGAAATGAACGGGACCGAAAACCTCGATCGAACG
GTCGTTACTTCAATAAGCAACGTGCACAACAATACTCTCCAACCTCCACC
GACACTGGATTGTCCGGATCTCCACCGTATGTAAACGGAATTAACGGAAG
CCGGACTAATCTTACAAATGGCTACAAACCATCCTACTCGCCGACATCTA
CTGATGCTGAATCAGTCTCACCCTTACCTTCAAATGGGTGGGATTTTTCA
GAGCTCGAAATGCGCTACACATCAATGATAAATAGCCTAAAAGACGAACT
TTCTTTTCTTGAAGAATCAAACACCAATCTACTTACGGAGCTACGAGAAA
GTCAAAACTCGAATTACGTATTAACGGAAGAAATTCGACGTCAGCAACGT
AACAACTTAAGTACGTTAGATGAGTTACAAGCGTGCCAAACAGCAAATTC
AGTTCTGAGACAGGAGTTGCAACGTCTTGAGCAATCCAGCGTTAAAATGT
CCAGAGATTCTGAAAAATACAAGAAGGCGAACTCGATGCTTAAAGATGAG
ATCAAAGACCTCAAAGCTCATAACTATAAACGTAAAAACAGTATGGTTAC
ACTCAAAGAGAAAGCTATTGATCTACAAAATGACATTCTAGAAAAAGAGA
AGGATTTCAAAGATTTGTCATCTCTCAAACAAACTGTCAATATAATAGTC
GAAGCGGTCGAAAACGATTCTAACATCGATAACGGCTATTTCCCAACCGA
TTCGGACATTTCTAGTAACGATGGCAACGATGATAAACAATTGGGTGCTT
TCACTCCAAAACCGGTAAAAAAATCGGATACTTTCTCAAGTTCTTTGCCT
TCACCTCTAGCAAGGAAATTCTTTGCACATCAAAACGGGGGTAAATCTCC
ATTACTGAGACGAAAACAGAAAGACAAATACAACACTGACCTGACTGAAC
GATCTCGCTCGAGATCCTTGAACGTGACTTCTGGGGAAAGCCGGGACGAA
AGTCCCTCTCCTCCCCATTACAACGGTCCCTCATCCGGCCCTTTACCGGC
GGCTGGGGACCGACGACGAGGGTCTCTTGATAGTTTTCATCAGAATAAGG
ACTTGAAAGAGACCTCTCTTCGTAACAATACTTTGACACGACAGTTAGGG
AAATCCCTTGAACGACTTCACGATCATAAAATCAAACGATCGGAGTCGGG
GAATCGCCCACGTAGTATGACGTTTGACGATCGACATAACGATAAAATGA
CGGATGACTTTTCTTACGTCGTAAAAGGTGAAAGTATTGGAACGATCAAC
TCTGCTTCTCCCGAGCAAGGAACCTTTGAGCTCTAACATTTCATCTTCCG
CGTACGTCTGAAGAAACGATTTAAGTGGATGCCTAACTCGGATACTACTT
TGAATTAATACACCCAGGACGTGTATCTTCGAGCTCTAACATCTCTTCCA
TTGAGAATGTACAACCATAACAAGCCAAGATGTTGTTTGGACGTTATATT
AGCGTTCTTTTAACGAATAATGCTCAGGCGAGAAATAATCTAACATTTCA
AATGTTCTAACATTAATTTGTAGAAGGACTTCAAAGAGACTGACATATGA
ACAATAAATGAACATGTTACATCTTGGCTCCCGAAACAACGGATTTAATA
CACAACGTCCCGCAATATCAATCTAACGTCGTACAGATCTTTTTCGATGG
ATATTGTTAATGTAGGATCACTAGGAAGGCACTCATTAACTCAAAAATTA
TTTGTACGCTTGTATGCGTAGCATCAATGAAGTCTTTAGTTAGAAGACAT
TTTTATCTGTACGAAAATATATCTCTAAAGCGTTCACCATACTTGGAAAT
GTATCTGGAAATTATCACAACTACTGCTGTAAAAATACTACTACGAACCG
TAAAAATGATCAAGAAGTGAAGTCTGATAGACTTTTCAATGGCAAAACAG
ACcaataaaattttacaactttttactACAGTTTTGCGTGtttttgtctt
taaaaataatatctaaatatcttttaaaaacctTCTATAAGAATACCCAC
GTATTTTTACTTGGCAATATACTAAGAACATATTTGACTtaagaattttg
taaaatattgttattttctACAAAACTTTGAAACATACTAGAAAATGA
Run BLAST on NCBI

transcript from alignment at scaffold_142:870718..883393-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048409 ID=TCONS_00048409|Name=TCONS_00048409|organism=Clytia hemisphaerica|type=transcript|length=12676bp|location=Sequence derived from alignment at scaffold_142:870718..883393- (Clytia hemisphaerica)
GAAGAATCTGGATCGAAATGCTTTTTACATCTGCCTGAAGGCTTTATAAT
TAATTGATCGTAGACTTTGGCAGACCATGAGTGTTTTCTGACCAACACGC
TGAAGCTCTTAAAGAGATAGATGAAAACAAACAATCTGACGAATTAGCTA
TCAAACTCATATTTCGTAAAGACCGCATATTGAAATTGGACAAAAAAGTC
GTTGCGAGATTTTGTTAAAATAGGGCCCTTAAATGGTTAATCTTAAGCTA
CTTACTACTGCACGGTTTACCGTATGCGTAAGAAAGTTATGGTTGTCTGT
TACAAGAGGTCACATGTTCCACAAATGTACTGAGCAATAGTGTAGATGAA
ATCTTAAAATGGAATCCTTAACCTCAAAGTTTAGTGTAGTAGGTCGTCAA
GTTTTGTTGGTCGGGATTGCCAGCTAAACTTCCAATGACATAACATGTAT
TTTTAAACTATGTTATACAATGTGGAAATCTAAACTTGATTCTGTTTTAC
CCAGAAGGAAGAGAAGTTAGATAATAAAGCAGTCTCCACGTTTTTATTTT
CTCCTTTTCGCGGAACTCTATAAGTCACTATTATAACTTGTTATGAAGAA
TATTACTTTCCTTGGAGACGGTAGGAAGAAGGCGGTCTAATGGTTGACCC
TCGATATTGCGTTTTTTATGACCTTTAATTTTCGATTTCAATCACTGATC
AGAAAATAAATTTATAATCATCGTTGAATTTTGTGTTGCTGACAACGCTC
GTTGTAGAAGGGGTATATACCGAGTTTATGTACGTGTGTTTTTCTGTGAC
GGGAACAGTAACGTTCTTATTTGTCTAACTCCTGGACTAACCGAGGACGA
CGGTAAATCAGCACTTTTACTCCTCGATCTTGCGGGTCAAAACTGCGGGT
TATTCAAAATCACTTCAGTCACTTTACTGTCCTCAAAAGTCCAATTTCAT
TTTAAACGTTCCTTGGTATTGTGGTGTTTGAAGAAAGATGTGATGGTACT
TCAAACATTCCCCCATAGGCGTAGCGAGATGCCCTGCAAAATTTATGGAT
GAGAGTGGTTTTTACGACACTGTAATTATTGTCTTTGTTTTATCAAAAGA
TAGTCAATATGTCAAAAACGTCTACACTCCCTCATAAATTTTGCAGGGTA
TCTAGCTACGCCTACGCATGTGGTGACAAAATATGGAGTTTAGTAATTTG
TGTGTGTGTCGATATTTCGGTGTTTTTGGTCCCCGTACGCCCCTACCATT
GTATATCGACATTGAGCCTCAAAAATACCAAAATATAAGAATAATTTAAG
AGTCTTGAATTGCCTTTCTTAAAGCCTTTTAGGAATCAGAGAAATAAAAA
TCCTCAATTTTGAAATATTAGAATAATATAAGAAAAAATCAAGGCTCAAA
ATGCTTAAAAAATTTACTTTGCTACTAAAGTCTGTTCACGATAAGTGTGC
GCTCTTTTTTCTTTTACCTATAACTTTTAAAGGAATTCTTCAAGAGTCTA
GGTAATGTTCTAGTTGGTGAGTTGGGGAGTTGGGGAGTTGCTAGTTTCGA
GTTGGGAGTTCGTAAAACTTTACGGCGACCGAAAATTTTCTAATTTAAAC
TAATGTAGCCCAAAAGTACAAATTTCAAATTAGCCAGTACCAAACATATT
ATTGACTTTAAGATCATGAAAATGCCAAAGCCAAGCAAAGCCAAAATACT
TAGTACTGTTATGTCATTGTCATAATGCTGATAACATGACACGTTCTTGT
GAAAATATTGACAAAATCTTTAAATATAATGATTGTCAAACAAATTCCCC
AAAAAATATTGATCATACTGCTAGTGATGCTTATTGTATAAAAGGATATA
AGTTGACAGTCATCTTAGCCTCAAAAAATTCGTAGAGATAGCTTATAGAG
CTAGAAAAATAATGACACTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNAAAATACAATGGTTCTAAAGTCACTTTAATCAAGAATTATATTT
ATACTCAATGTGATGCAGGAAATATAAATGGATATGAATTGACAGTAGAA
AATAGCTGTCCATGTTCTCAGCGCACGTGTTTAAGGCAAATAAGCCTATT
ACAGGTGGTATATGTATTATACGTATTATATGTGTTATATATTACTCTCA
TATTATATTTACTTTCAAAATCGTACTTTTGATGTATGTTATTCTTTTTC
GGTAGCCGGTAATTTTTTAACTCCCCAACTCGAAACTAGCAACTCCCCAA
CTCCCCAACTCGAAACTAGCAACTCCCTAACTCGCGACTAGAATAGTTTC
CAAACTCATTCTTCAATCTTTATAAATTTGGTATCGTTGAAGAGATAGTT
GTTGGCGGAACAATTTGAAATAAAAAAGTCTTTAAAAAAATTCTAAAAAT
ATAGATGAAAATAAAGAAGAAAAAAAGGAAGATCTTGAAGAAAAGTGCTA
TAACTTTCATTTTCACTGGAGAGATTCTTTGATCTTAGGAGGTCATCACT
GTGAAGAAATTTCACTAAAATATTTATTCAATATAAAGTTAAGATACAAA
GTTAATAAGTGATTGACCCCAAAAAACAGCAAAAAACAGCAGAAAGCAGC
GTTTTTAGACGTCAATGGAGCTTATAACTTGTTTGATATCTTTTGATTGA
ATGATTATTTTTGAGAAATTTTTGCACAGGGATGAACGTTGGTTGATTAA
GGATTCAATTCAGTGAAAATAAAAGTTATAGCACTTTTTTACAAGATCTT
CATTTTTTTCTTCTTCATTTTCATCTACATTTTTAGAACTCTTTTAAATA
TTATTTTATTTCAAATTGTTCCACTCACTAATATCTTTCCAATGATACCA
AATTTATAAAGATTGAAGAATTCCTTCATAAGTTATAGGTAAAAGAAAAA
AGAGTGCACACTTATCGTGAATAGACTTTAGTGAGATGCATCTTNTAAGT
TATAGGTAAAAGAAAAAAGAGTGCACACTTATCGCGAATAGACTTTAGTG
GCTGTAACTTTCGATGCAATTGATGCAATGATTCATAGATAGAAATTAAA
ATTACTGTTTTATGTAGGCCTTGGACATCCTTACCTCAAGTTAGAAAAAA
AAAACTCTACAGCTTTCTTCATCTTCAAGAGGTAAGGTTGAGCCGTAACT
CTTCTATAAAAGGAACAAAAATTGATCAGTAGTAATTAAAAAGCAATCAA
AAATAAACAATGGAAAAAACGTTAATTAGTGTCAATTAAGAAACAAATTC
TTTTTATCCTCTATTTCATCTTGTATGTTGTTATGAGAGTTGCAATTTAG
TGAAAGATTTTCGTGGTCAGATTTGTGTTAAAAGATTTCGTTGCAAGGCT
TGGTAGCTGAAAAGTTGCTTGAAAGATTTTTTTGGGGGAGCGAATCGGTA
ATGTCAGGAGTCAAAATGCAAAATGGCAGCGTACCTGTCAAAGGCAGAAA
AATTGATTCCAAATTAAAACTGAAAGTAGGTTTAAAATTTTCATGTTATA
AAAATTATTCCTTCTAGCGATATATAGAGGACTTTTACAGGGCAGGGTTG
GCCACTTAGACAAAATTGGGTACAAGGAGGTGCCACTGGTCGTGGTCCCA
TTTTTTAGGCTCTGAAGATATCTGACAGGGTCTTAAATTTACGGATCAGG
TCCGGTTGAACTGGTCGCTGGTTGGATTCTTTTCAGGATGGAAATTAGAA
AATTTTGCGTTCACTTTTAGTCATTTGAGCCACTTTCTAGGGTGAAAATG
GGAAATTTTTTCGATTTTTCTTTCTGACAGGGTCCCAAATTTTCCAGATA
TTCATATCTGACAGGGTCCATTTTTCAAACTTTAGCGACACGTCCCCGTC
GGCCGTCAAAGTCAGTGCCCCCCGGGTTTTCATATTTCTGTGTACCGGAA
TGCCACTATGTACACGTTTGTTTTACAAAACGTGTACGTGTTTTTCTCAG
TGACTCGGTGACGAAAATGGCCCTTCACGATTGGATAAAATTATAAGAAG
AATATAACAACATACAACGGATAGGGGGAGTGCTTTAAAATCCGTTAGTT
TTTAATGAGTGGGGAATTCTAGTCCACAATCCAGAAAACTCGTTTGGGAT
AACAAAATTTCTCAGTATGTTTCCCCTAAGAGTAAGAGAGCTCAGCTTAA
TCTCTCAATGTAGATGTAATTTTGTGGGAAGTTATTTCTTAAAAGGGAAT
TTTCTATATAGCCATAAACAATTGTTTCCATCTAGGCTAAGGGGTCAATA
TGTTATATTGATGAAGAAAAATCAGAGCCTTCTCATAAAGATATAGTATC
AAAGACGATAGTTAATCGCGTGGGAACACTAAATACGTGACATCGAATGG
TTCAAATATATCGGAAAGGATATTGAGTATTTACGAAATCAAAAAGAGAT
CTAAGAAGGAGTGGTCTGGGTCGTAATGATCTCCTATTTCTGGGTTTGAA
GCACTCTTCCACAGTGTCGTTTGCTTTCATTTCGGCATTTGTTTTCCTGA
AAACGGGATTTGCGTCAACAAGTTTCATAATTGCTACATTTTTTGTACCA
GGAAGAAAATTTCGTTTTATGAAGAAACATTTTGAAAAAATTAATGATTT
CTTTTTTTTTGCATCCGAGGGGTTTTAAAATTGAGAAATCCGTTACTTTG
AAATTCAAAGGAGAGAAACATAATATTTCATAAGGAAATTCAGTATATTT
TTCTAATTAGGATAAAATTGCAGAACGATATTTTTCTCTGCAGATGAACC
TTTGACTAACCTTTCCAGAAAGAAGTGATGCTTGAACCCGGTCTGCAGCA
CATGCACGTGAATATTGCAAGGTGATTATCCGACGGAGAGATGGAAGTTT
AGTTCTCAGTAAAAGTAGAATTGATCAAAACTGAAACATCAGCTTTTTTT
CAGCTATTTTTCTGTCTTCACTGAATTTTCTGATTTGAAAACAATGGAAT
TCAAATCCCAGCAAGCCTATGCAATATCTATCTCCGTCAAACACCCCTGT
CTCACAGCCCCGGTGAAACTTTTTTCCTCATGGGGATAAAAACTCCTATT
GAAATCCCAATGGGGATAGAAATTCTATTGGGTTCTAAGGTTAAAAAAAT
TCAGTGGGGATGTGTTTTGAGTGCAATTTTTAAACATTGAATTTCGAATG
GGGGTGAAATCAAAGTCAATTTCCCAGTGGAGCTGAAATTTCAGGGTATT
TTCCCACCAAAGATTTTCCTGTTGGGCTGGGGTCTTAGTGGGTCTGACAC
AGGGGTGACATCGAGCTTCAGTCCGTAATTTTTACCCCCATTGGTTGAAA
ATCCTACTGGGTCTTTGAGGAGGGGGTGTCTGTGTAGGTTGGCTAAATCT
CTTAAGATAAAAAGGAAATGTCAAGAAATACCAAAGAAGCTTATCTCTAA
TCTGTTCCGTATAAATGCCAGAAGTTAAACCGTGACATTTGAATTCAAAA
AGAACTATGTAGATAAAATGGAGAAGAAATCCTTGAAAAGGAATTAGAAT
TTGATTTCTTGTACGTCAAATTCAGATTAAAAGAGACGTAAATGTTTTCA
TTATTTTTCGTAGGGTATGCTGGTTTTTTATTGTTGACTTAAGTACTGGA
ATCTCACTGGACTTTTTTAATTGCTTTTTAATTCTGATGTTATGACGTTG
GGAAGCATTCTTCCATCGTTGGTTATGGGCTCTTCTAGCAAAAATACCTA
GGAGGTTAAAGATGTACACTTTATTTTTTTATAAGAACAATGAGGCTCAA
AAATGCGAAAAAATAAGAACAATTTAAGAACAGTGGAGAGGCTGAAGTTA
GAGAGTTATAGCAAAAAGAATAACTGGTTTCTAAAATCCTCTAAATAGTA
AAGTAAATAGCCAAAACTTGTTTTTTACCTTAGAAAAAATAAGAACAAAA
TAAGAACAATTCAAGGCTCAAAATGCCAAAAAAATAAGAAAAGCCGAGCG
TCAGCAAAAATTTACTGGCAAAAAAAGAGGTGTATTTTCAGCGTATTGCG
ATGGAAAATTGTGAAAAACTGTAGATTAAATTTGCATTGTCCAGGGGTAA
ATTTTAAATGCCCACTCACTGAAAAAATAAAATATTGAGCGGGTTTAACT
TTAGTTCAGTAGAGCCAGGTCTGTAATCAGCTTTCCTGAAATTTAACTCC
TTTTGTTTTAGTGCTTTTACGATTTTGAAGGCGAAGTTATTTTAAAGCTT
GCTCGAGTTAGGGAAACATTCGAGTTATAGAGGTCTGAGTTAAAGAGTCT
CTACCGTAGTTGAAATTGATGAAAAGTCACGTGATCCTAGTATGTAAAGA
AATGTTGAAACATATTTGAAAAGTCTTTTTCGATGCCATGTTTCGGAAAT
CAAAATAATACCTGGCTAATTAAGCACTAATTAAAAATTTATTGTTCAGC
CTACAATTTCAAAAAGTTCGAAGGAAATTGGTATAGCTCACTATGATAAA
AAAGAATTCCAAAATTTTATTTTTTGTTTTTCTTTTAATTTGTTTGTTGT
TGTTTTCGATGGTCATTAAATGCTTCGAGCAATAAATAAACAGTTCAGTA
GTAAAGTTTTGTACTTTGTTGAGAGAAGATCTTGAAGGATTTTAAATCAA
CTTTTTCTTCTGACCTAAATTTCACTTGAATACCACAAAGATTGTATATC
AATGTTACTACAAACGGTCGAGGTAAACATTATCAATTGCTTTTGAAAAT
TTGATTTTGACTTAAATTTCTAGGACCATACTTGACTAACTTTCATGGGT
CTCTCCAGTACGTTTTCAATGACTTTTTAAACCTTTTGATTTTGACAACT
GTAGTCTTTTTAGGCCACACCCACTCATCAATGCAAGAATCTCTTATTCT
CGGCAAACTTTGAAAGTCTTTGTGAGGTTTTCAGGATAAACAAGTCCGAA
ACATACCATTTAACCATTTAAAATTGCTTTATAAGAGGAACTGTGAATCG
CACAGTTAGTCTTGACCACAATAAAGACTATGAAGTTTCCTTTTATCGCC
AAATGGAACAAATATAAAAGATAGTTATAGCATTCTCCTTGTATCAAACT
AAATTTTGACTCTGGTCAAAGGGGTTGTATTTTTTGATTGAGCAAAGTAG
ATAGCGTTGAGGACATTTTTCAAAAAAAAATATTTTGGAAGTTCTAATTC
TATCGGATTTGAAGTGTAAGTATACTCTTGTCTCCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCAGAACTTTTTTTAACAACAACAAAAAAGAAACTTTA
GCAAATGAACACGTAAAATAAGAACCAATACTAACAAAAAAGGAAAATTT
TAATACGTTTAAGGTCTATCTACACTTTAATAAAATATTGAACTATTCGA
ATTTAATTGGCGGGGGGGACGTCTATTCGGGAGACAAGAGTAGGTAAGGT
AATGCTATTAGCCACATTTTATCATGTGATTCAATTTTGATGATTTAACT
TTTGACAACAATAGTTTTGTCATCAGCAGTTCATAGGGTTACTGTGAAAG
AAGATTGTAGATTTCTTTTTTGAAATTGCGGGGATTGTTGGCTATGTAGA
CGACATATCTCACCGCACATTGTTAATTTTATCCTGTAACATCGACAAAG
ATTTTTCATAATTTATCACTGTCAGAATTGTGTAAATTATTCAAAATAAT
TGTTACGAATAAATTCTCTAATCACCGAAAAACATCAGATGTTGACAACT
TTCAAACTAGTCAACAATCATTCCTCTAAATACGGAAACATGCAATCACG
TCATACAGTAGGAAAAAAACTTTCATAATTAAGGAGGTTATTTAGTGGCT
TTTTCAGGAAGAAATACCGAAATTAAGCAGATAGTCATTAAAAATATACT
CATTATATGCAAAATGTTTTACTGTATTTAGAGCATGGTGCCACATTGGC
TTTTGATTATTTTGTTCTAGAGAGGGGAGTGACTGTTGGATATGAACGGT
GTTCTGCGTAATGTGATATGATGATATCTATGTTGTCGAACGATTTGAGG
GTTTTATTAAGTCGAGGAATGAATACATAATCAAAATATTGAATTGATGA
AGTGATTGAATGAATTTAGCCATGAAAATTTTTAATGATTGTGGTTAGAG
TCTGATGCCACACTACGTTGTTTGAGGGTCCATCTAATGTCTACAACACC
CATCTTACATCTTTGACGTTGATTGGACGTTAAATGAACGTTGAAACAAC
GCCGTGTGTCAGTTGGGAGTTTGTATAAGGCATCTTTGTTGAGTCAACAT
CAGTATTAGGCATTAAAATTTGAATAAGGTATTTTCTGTTGGAAAAAGTT
TTGCTAAAAGTTAACTACTAACCTTTGAAAACTTCAAACTATTTTGACAA
AAACTCGCCAAAATAAAAACTTTTGAAACTATGCAAAGTTTTTGGGTCAC
CTATTAGAATATCTCATCTTTGTTTCCCAGGTACAACAAACTTCACTCGA
AGAAAACAACACAAACGTCGCCATGTTGGATCGAAATGAACGGGACCGAA
AACCTCGATCGAACGGTCGTTACTTCAATAAGCAACGTGCACAACAATAC
TCTCCAACCTCCACCGACACTGGATTGTCCGGATCTCCACCGTATGTAAA
CGGAATTAACGGAAGCCGGACTAATCTTACAAATGGCTACAAACCATCCT
ACTCGCCGACATCTACTGATGCTGAATCAGTCTCACCCTTACCTTCAAAT
GGGTGGGATTTTTCAGAGCTCGAAATGCGCTACACATCAATGATAAATAG
CCTAAAAGACGAACTTTCTTTTCTTGAAGAATCAAACACCAATCTACTTA
CGGAGCTACGAGAAAGTCAAAACTCGAATTACGTATTAACGGAAGAAATT
CGACGTCAGCAACGTAACAACTTAAGTACGTTAGATGAGTTACAAGCGTG
CCAAACAGCAAATTCAGTTCTGAGACAGGAGTTGCAACGTCTTGAGCAAT
CCAGCGTTAAAATGTCCAGAGATTCTGAAAAATACAAGAAGGCGAACTCG
ATGCTTAAAGATGAGATCAAAGACCTCAAAGCTCATAACTATAAACGTAA
AAACAGTATGGTTACACTCAAAGAGAAAGCTATTGATCTACAAAATGACA
TTCTAGAAAAAGAGAAGGATTTCAAAGATTTGTCATCTCTCAAACAAACT
GTCAATATAATAGTCGAAGCGGTCGAAAACGATTCTAACATCGATAACGG
CTATTTCCCAACCGATTCGGACATTTCTAGTAACGATGGCAACGATGATA
AACAATTGGGTGCTTTCACTCCAAAACCGGTAAAAAAATCGGATACTTTC
TCAAGTTCTTTGCCTTCACCTCTAGCAAGGAAATTCTTTGCACATCAAAA
CGGGGGTAAATCTCCATTACTGAGACGAAAACAGAAAGACAAATACAACA
CTGACCTGACTGAACGATCTCGCTCGAGATCCTTGAACGTGACTTCTGGG
GAAAGCCGGGACGAAAGTCCCTCTCCTCCCCATTACAACGGTCCCTCATC
CGGCCCTTTACCGGCGGCTGGGGACCGACGACGAGGGTCTCTTGATAGTT
TTCATCAGAATAAGGACTTGAAAGAGACCTCTCTTCGTAACAATACTTTG
ACACGACAGTTAGGGAAATCCCTTGAACGACTTCACGATCATAAAATCAA
ACGATCGGAGTCGGGGAATCGCCCACGTAGTATGACGTTTGACGATCGAC
ATAACGATAAAATGACGGATGACTTTTCTTACGTCGTAAAAGGTAATGTT
TAATGACTATGACATGACGGAACTGACGAATCGTTTTTATAGAAAATCTA
CGTTTATTTGTTTCAACAAGCTTATAGTGACTACCGCATGTTTTTCAGAC
GTGTAGGGCTGCAATACACATATTTCCTATTAGCAGATTCATGCAAAAGT
CACGAAAGACGTCGAGTAAACAAACTTTTGATTGGCGGAGGGATGCAAAG
ATTACCTCTTACATGGACAATTTGAAAAAATATGCTTGTATGTGCAATAT
TTCAGCCAATCAGAGACTTTCTCGACGTTTTTCGTGACTTTTTTACACGA
ATCCGCTAATAGGAAATAGGTGTATTCCCTTTATCAACCTTCGTATAAAG
AAATCGATTTAAGCTCCCCTGCTAGGCATTTTCGTACCCAGAGTCTCTTA
CACCACTTTTTGATTGTGCTGATGGATGTGATACAATCGTGAACGCTATT
AGATTCATCGAAAAAGCGAAATAAGGGACTGGGTTCGAGTCTACCTATTT
TCTAAATGCAAAACTTTTCATGATCTTATAACTGAATGTTCTTCAATTTT
TAATGCTCTTGTGTTCTTATAAGTAAATGTTCCTTCTTTGACTTTTAACG
TTATATATAACTAACTACAGTTGACTTTCTCTAATTCGATCTCAAAGCAC
AAAATATTATCTTCGAATTAGAGAACGATTCGAATTACAGAGAGTAATTT
ATTTCATTCTCAAGCCGGGGGACCAATGTTTTAGTTTTAGTTTCGAAAAA
ACTTAAATAATAGGAGTTCGAACTAGAGAGAATTGACTGAAGAAAAATGG
TCTACCTTTTCGATGTTTTATCTAAAAATATGTTCTGTATTTGATGTTCT
TTTAGGTGAAAGTATTGGAACGATCAACTCTGCTTCTCCCGAGCAAGGAA
CCTTTGAGCTCTAACATTTCATCTTCCGCGTACGTCTGAAGAAACGATTT
AAGTGGATGCCTAACTCGGATACTACTTTGAATTAATACACCCAGGACGT
GTATCTTCGAGCTCTAACATCTCTTCCATTGAGAATGTACAACCATAACA
AGCCAAGATGTTGTTTGGACGTTATATTAGCGTTCTTTTAACGAATAATG
CTCAGGCGAGAAATAATCTAACATTTCAAATGTTCTAACATTAATTTGTA
GAAGGACTTCAAAGAGACTGACATATGAACAATAAATGAACATGTTACAT
CTTGGCTCCCGAAACAACGGATTTAATACACAACGTCCCGCAATATCAAT
CTAACGTCGTACAGATCTTTTTCGATGGATATTGTTAATGTAGGATCACT
AGGAAGGCACTCATTAACTCAAAAATTATTTGTACGCTTGTATGCGTAGC
ATCAATGAAGTCTTTAGTTAGAAGACATTTTTATCTGTACGAAAATATAT
CTCTAAAGCGTTCACCATACTTGGAAATGTATCTGGAAATTATCACAACT
ACTGCTGTAAAAATACTACTACGAACCGTAAAAATGATCAAGAAGTGAAG
TCTGATAGACTTTTCAATGGCAAAACAGACCAATAAAATTTTACAACTTT
TTACTACAGTTTTGCGTGTTTTTGTCTTTAAAAATAATATCTAAATATCT
TTTAAAAACCTTCTATAAGAATACCCACGTATTTTTACTTGGCAATATAC
TAAGAACATATTTGACTTAAGAATTTTGTAAAATATTGTTATTTTCTACA
AAACTTTGAAACATACTAGAAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030795XLOC_030795Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048409-exon-scaffold_142-1575043694:883229..883393TCONS_00048409-exon-scaffold_142-1575043694:883229..883393Clytia hemisphaericaexon
TCONS_00048409-exon-scaffold_142-1575043694:872452..873763TCONS_00048409-exon-scaffold_142-1575043694:872452..873763Clytia hemisphaericaexon
TCONS_00048409-exon-scaffold_142-1575043694:870718..871588TCONS_00048409-exon-scaffold_142-1575043694:870718..871588Clytia hemisphaericaexon
TCONS_00048409-exon-scaffold_142-1510915933:883229..883393TCONS_00048409-exon-scaffold_142-1510915933:883229..883393Clytia hemisphaericaexon
TCONS_00048409-exon-scaffold_142-1510915933:872452..873763TCONS_00048409-exon-scaffold_142-1510915933:872452..873763Clytia hemisphaericaexon
TCONS_00048409-exon-scaffold_142-1510915933:870718..871588TCONS_00048409-exon-scaffold_142-1510915933:870718..871588Clytia hemisphaericaexon
TCONS_00048409-exon-scaffold_142-1491911889:883229..883393TCONS_00048409-exon-scaffold_142-1491911889:883229..883393Clytia hemisphaericaexon
TCONS_00048409-exon-scaffold_142-1491911889:872452..873763TCONS_00048409-exon-scaffold_142-1491911889:872452..873763Clytia hemisphaericaexon
TCONS_00048409-exon-scaffold_142-1491911889:870718..871588TCONS_00048409-exon-scaffold_142-1491911889:870718..871588Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:870718..883393 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	2.87381e-07	8.98963e-07	0	0	0	0	0	0	0.593063	0.269592	0.897921	2.68932	1.34575	8.34819	0	0.50719	0	0	0	0	0	0	0	0	0.0670165	0.693979
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048409 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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