TCONS_00048367 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048367
Unique NameTCONS_00048367
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2144

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048367 ID=TCONS_00048367|Name=TCONS_00048367|organism=Clytia hemisphaerica|type=transcript|length=2144bp
TAGAAATGGATCAACATGGTGAAGTTGAGATGCAGACACTAAAAAACGAA
GAGAAATTACCAGAAAATGAGAAGAAAGAATCGTATCAAAGCATTCCTGA
AATTACGAGATCGGTCGTTCGAACTCGGTTATCACCGATAAACGACATTT
TAAACCTCGCAGAAACGAGAATCAACGAGTTTTTTCAAGCTCATAAAGCA
TTATGTGTCCTAACTTTAGGTATAGTCTTCTTGGTTggatttttagttta
tttttgttttgctgtAACGATGAACGCTGAGAGAGCAAAAGATTTGATTT
ATGTGACTGTTTTTGGATTCTTTTGTTTGTGTTATTGGTTGATCAAGAAA
TTNTATGTGACTGTTTTTGGattcttttgtttgttttattggttgatCAA
GAAATTCTTTGGTAGAGTCATTTGGAATCGATGCTTTAAACCGATTGCTG
TTGCTCTGGATAGTCATCAAAGATTATTGAATTGGATAGGATGCCTGGCA
TTGGTTGGTTTTCTAATCTTTTGGATTTGTTGGGATACGAGAAAAGATCC
TGGACGATTGATTTCATTGGCTGGTTTGTTGGTTTATATTCTCATCGGAT
TCTTGTTCTCAAAACAACGTGATCGGGATTTGCTTTGCAATTCTTCTTCG
GACTTTTGATATTGCGAACAGAGATTGGATTCAACGTTTTCAAATGGCTT
GGTGACCGTATCAATATCTTACTCTCATTTTCTGGCCCTGGCACGGAATT
gatatttggaaaatctgatgTTTTCGCATTCGCCGTATTACCGATCATCA
CATACTTCTCATCTTTAACATATGTTTTATACTACCTCGGTTTCATGCAA
GTCATCATCAATAAATTAGCCTGGATACTCCAAATTACCATGGGAGCAAC
GGCTACAGAATCAGTTAATACAGCTGGAAATATCTTTTTGGGTCAGACAG
AGTCTCTTCTTCTCATTCGCCCCTTCATCCCTAAAATGACAAAATCAGAG
CTCCATGCATTGATGACCGGTGGACTGGCAACTATTGCCGGCTCTTTGAT
GGCTTTGTATATCATCTTCGGCGTCTCGGCGTCGCATCTGCTTTCCGCTT
CAGTAATGAGTGCACCCGCTGCGCTGGCAATGTCTAAATTAATGTACCCT
GAAACAGAAGAACCTGAATTTGTTGGCGAAGTGAAAACTGAGGCAACAGA
GGAGCGCAACATTTTCGAAGCGATTGCAGTTGGAGCCTCACTTTCAATAC
CTATCATTGTTAATGTAGTTGTCATGATGATTGCTTTTGTTTCCATTGTA
TCATTGTTCAACGGGCTTTTATCTTGGCTGGGCTCGATGGTGGATTGCCC
ACAGCTCTCTTTCGAGtttctTTGTTCATACCTTTTCATGCCGTTCGCAT
ACTTAATGGGTGTGGAATATCAAGATTCTTTCCACGTCGGTGAAATGTTG
GGCACCAAGACGTTCCTCACTGAGTTCATCGCCTACAAACAACTTTCTGC
AATGATCAAGAATCGAAAATTTCAGATCGCTGGTGGACTGCAGCTTTCTG
TGCGCTCAGAAGTCATTTCAACATATGCTTTATGTGGATTCTCGAACTTT
GGTTCAATGGGCGTGATTATGGGCGTTTTAACTGGTATTGCACCTGAGAA
GAGAACCATTTTTTCGCAGCTTGTGTTTCGTGCACTTGTGGCCGCTACGC
TGGCTTGTTTCATGACAGCCTCAATTGCAGGTTTGCTTTATAAAGATTTA
GATGTCACACCGACCCCTGGGCCAACGAATGTGACGAGAATAATGCCGTA
ATTGGTTATCAGCAGTTGGCAGTCATCAAGCTGGATGGTCTACCTTTATG
CTACGGTCAATTCATGTCAGTGAACTAGGCTGATTGGAGAATTCCCCTAT
GGAACATGTTTTTAGTTTAATTGCTACTTGAATCAGTTTACTTACCAAAT
CCAGACTTGAAAACATAAGGAACGACAGCATTGGGCCATTTTCTTGTCTG
CACCACGTCAGCAACTTTCCCCGTTGGATTTCTGTTATCTTGCTGTCGTA
AATATTTTCGCAATTCTGGTGTTAATACAATGTCTGCTTGGAACAAGGAT
CGACCTAAATTGTATGGAAAgttgaattttgaattgaaaatcaG
Run BLAST on NCBI

transcript from alignment at scaffold_142:438278..454377-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048367 ID=TCONS_00048367|Name=TCONS_00048367|organism=Clytia hemisphaerica|type=transcript|length=16100bp|location=Sequence derived from alignment at scaffold_142:438278..454377- (Clytia hemisphaerica)
TAGAAATGGATCAACATGGTGAAGTTGAGATGCAGACACTAAAAAACGAA GAGAAATTACCAGAAAATGAGAAGAAAGAATCGTATCAAAGCATTCCTGA AATTACGAGATCGGTCGTTCGAACTCGGTTATCACCGATAAACGACATTT TAAACCTCGCAGAAACGAGAATCAACGAGTTTTTTCAAGCTCATAAAGCA TTATGTGTCCTAACTTTAGGTATAGTCTTCTTGGTTGGATTTTTAGTTTA TTTTTGTTTTGCTGTAACGATGAACGCTGAGAGAGCAAAAGATTTGATTT ATGTGACTGTTTTTGGATTCTTTTGTTTGTGTTATTGGTTGATCAAGAAA TTNTATGTGACTGTTTTTGGATTCTTTTGTTTGTTTTATTGGTTGATCAA GAAATTCTTTGGTAGAGTCATTTGGAATCGATGCTTTAAACCGATTGCTG TTGCTCTGGATAGTCATCAAAGATTATTGAATTGGTAATTATATTTCGCA AGGTTTTTTCCAAGTTGTTTTTGGAAGTTTGATAATTTTTGCCTTAACCC TATTCATACTAGGCTTTTAGGGGCGATTTAAAACGAGGGGGGCTGTTCCT GTACCACCCTTTAACTTTTGATCTAGTGGGTCTTTTTGAATAAAATTTGG CACACAAGATCCTTGTCATCATATGTGGTAATTTTTTTTTAATAAGTGAT TTTTTGATGACGTCACTTATCATGCACAAAGTGAGCAAAAACCGATAATT TCCATTGTTCTTAAACGGTATATTTGACAAAAAAAATAAATTTGTATTGG AAATTTGTCAATTTTTGTGACACCTTACTGTCAGAAATGTCATCATGCTC AAGGTGTGAAAATTTTTAGGTGTCAATTTTTATTGTTTTGAAGCTAAATT AAAGTTAGACATTTACAAAAAGATTCATGCCAAAAGTTCTATCATTTCAG GAGCTAATAACATTAGTTTCATCCCAGAACAGAAACAGTCTCCAGGGGGG ACCCTAGTATGATAGGTTAAAATGGACAATATTTTTCAAGAAAAGGCATT ATTTTTTGCACAAATTTGTTCAGTTTTTGCTAACTTTTCACTGCAATGTA AGTGTCGAATTTTAAAACCCAAATTTTTTTCGTACATACGAAGAAACTGG GGAGGAAGGTTAAACAGATCGAGTGCCAACTGGCCTAATCATCCGTTGGG ATATACATATTAGGTTTAACTAGCAGAAAAAGTATTTTAGGTTGCTCCTA ACGGAAACTTGTTTTGTTCTGTCATAGGATAGGATGCCTGGCATTGGTTG GTTTTCTAATCTTTTGGATTTGTTGGGATACGAGAAAAGATCCTGGACGA TTGATTTCATTGGCTGGTTTGTTGGTTTATATTCTCATCGGATTCTTGTT CTCAAAACAACGTGATCGGGTGAGTAAAGATATCAAATTTCAAACTTAGG GGTTCATCCCCAATGATCATGTTATTAAACTGAAAACGCCTAAAAATTTA GCCAAATTTCTAAGTCACAGTCAAGCCTCACAACCCCTCCCATCTTATTC CCCATATGATTATTATTTAAAAACCCCCGTGATCAGGTAAGTTGGTCAAA AGAAAACGACCTTGCCATCACCCTAATACGCATTGTCTATGTTCTTGAAG GGAGATTTAGGAAACAAGAGAATCTAGTAATAAGTCAGGCTTCAAGTAGT AATTCCAGAGCATTACTTTATTCAACCGCTTTCAATCCGATACAGTCAGC TCTCACTAATTCCAGCTGGCACACAACGTTGTTTTAACGTCCAAATAACG TTATTTGGACGTTATGAATGTCAAATGGACGTTGTTTTGACGTTGTGTGC CGGCTGGGATTCGAACCTCTTTTATTCCTATCTTTCTGTAATTCAAACAT ACACACTGGTCTCCTCAGCTGGAAAGTCGACTAAAAATGCTCTCCCGTAA TTCGAATCTTTCTCCAATTCGAAGAAAACTCTTGTTTCCTTAAAAATAGA ATAAGTCAACTGTGCTTGCTTTAATGGGAGATTTTTAAATTAAGACTTTT TTTGTTGTCAATAGTTTTAGAAACATTACACTATTAGACTAACTTTTTTT GGGATCGTTTTTATGGTAAATTGTTTTTGAAAGTCTTGCTGGTATAAATA AACCAGGCAGGTCTCTTAAAATATCATCCACTGTGACTGTATGTTATTAT GTCTTAGATCAAATGGCGTCCTGTTATTACAGGATTTGCGTTACAATTCT TCTTCGGGCTTTTGATCNCTTATTATGTCTTAGATTAAATGGCGTCCTGT TATTACAGGATTTGCTTTGCAATTCTTCTTCGGACTTTTGATATTGCGAA CAGAGATTGGATTCAACGTTTTCAAATGGCTTGGTGACCGTATCAATATC TTACTCTCATTTTCTGGCCCTGGCACGGAATTGATATTTGGAAAATCTGA TGTTTTCGCATTCGCCGTAAGTTTTAACAGTTAAAACATGTAAAGTATTA GAGAGCGCTCAGTTATCCTGTAGACGTGTTTTGGATAGCCTATCGGTTAA GATAAGAATATCGAGCTCATTTATGTGTGTTTTTCTGCGACGGAGACGGT GAGATTCTAATTTGTCTACAGCCTGCCTGACTGAGGACGACGGTACATCA CGATTTTGCAGGTCAAAACTACTGATTTTTCCAAATCGTTTCAGTCACTT TACCGACCTCTAAAGTGTAAATACATGAACTCGCTAATGTATATCATGGG TCTCGTTACAGGCTAATAAGTCATTAACAATATACATTAGAGAGTTCAAC CTATATCTATTCCTGGTTGACTTCCCTAGACTCCATTCCTTTTTGTTAGT ATCCTTTCGCTTTTGAGACCCAAACAACGACTACGATCAACTTTCGAGCT AAGAGAATATCTTCAACTCCAATGGGTTTTAGACTTTCTAAAACCCACCA CTTAGTTTTCGGTCCCTATAGAGACTGGAACATAGTTTGTAGAGGGGTAT GAACCCCCCTAGGTTTATTTCACTCCCCCTATATATTGACCAATAAATCT CCAAACCCCCGTTTCTTATTTGATCCCACCTACATTCCCATCCCCCCTTC CCTAAATTTTTTGGCAAACTTGGTACCCCCTCTTATACAAAGGCCCCCAG AAAAATCGACTCCCCCATTCTGAAAAGAGGGGTGCCAAACTACACGTTTT TTTTTTTTAAGAAACTAGTTTTACCAAGCAGCCTCAATGTTTCTTAAGAA ATCGGCCTTTTGAGCCTTAAATGTTTCTTACATGTTTCTAAACTTTTTGA CATAATCAGCCTATTTTTCATGCAAAGAATGGAAGGTTCTAAAAAAACCG AGTTTAAAATGTTACTTTCTCAATCTCAGCCTCACCATGTTTCTTAGATG TTTCTTAGTATTTAAGCATTCTGAGCCTCGTGTTTCTTAAAAGTGTGTTT CTTAAAAAAAAAAAAACGTGTATGTGAAATATGATATATTTTCGTCAATG CAAAAAAAGAAACCTTTTCTCGACAGGTATTACCGATCATCACATACTTC TCATCTTTAACATATGTTTTATACTACCTCGGTTTCATGCAAGTCATCAT CAATAAATTAGCCTGGATACTCCAAATTACCATGGGAGCAACGGCTACAG AATCAGTTAATACAGCTGGAAATATCTTTTTGGGTCAGGTATCAATTTTT TGTTTTTTTACCGTTGAAACTCTTTACTTGAATATTGATCAATTTTTGTA GCATCAGTGGTGGATAAAATGGGAGTTCAAAATTCATGATGGAGTATTCT AGAGTTCGTATCGGTTTTTAAAAAAATGTTCGTGTAACGGGAACGGGGGT TGAGGGGGGCAGACTTACAGACATGCACAATATTGTCTGTTTGAAAACAA ATCATATAAGAAATGCTGCAGTTTCTTGTTAAATCAATTTACTCATTTTT CTCTTCCTTTTAGACAGAGTCTCTTCTTCTCATTCGCCCCTTCATCCCTA AAATGACAAAATCAGAGCTCCATGCATTGATGACCGGTGGACTGGCAACT ATTGCCGGCTCTTTGATGGCTTTGTATATCATCTTCGGCGTCTCGGCGTC GCATCTGCTTTCCGCTTCAGTAATGAGTGCACCCGCTGCGCTGGCAATGT CTAAATTAATGTACCCTGAAACAGAAGAACCTGAATTTGTTGGCGAAGTG AAAACTGAGGCAACGTAAAACCATTATTTTTTCACATATCAAAATTTAAA GTTTCTTTCAGATTTCAAAATAAGTATTTATCTCGCGATTGAAAGTTTAG ATTTTGTCCTTTGGCTACATATTGATAACATAAAAAGACAAGTTAAGATA ACGTCGCGTGTCAGGATTTGAAGGGACGGAGAAGGGATGTTTATCCTATT TTTGTTAAACCCTAATCTCGTAATACAAAAAACTTCTTTTTTTTTCACTT CNTCACGTGTCAGGATTTGAAGGGACGGAGAAGGGATATTTATCCTATTT TTGTTAAACCCTAATCTCGTAATACAAAAAACTTCTTTTTTTTCACTTCA GAGAGGAGCGCAACATTTTCGAAGCGATTGCAGTTGGAGCCTCACTTTCA ATACCTATCATTGTTAATGTAGTTGTCATGATGATTGCTTTTGTTTCCAT TGTATCATTGTTCAACGGGCTTTTATCTTGGCTGGGCTCGATGGTGGATT GCCCACAGCTCTCTTTCGAGGTATTTTTCTGATAATCATAGTGAAAAATT AACCTAGGCTACCTGGCATCCTCAAACCGTTTCGTGCTCCTTAAAACCTG TGGTTTCGTAAGTAGGGTCTGCGATTTTGACCTCTTTTCCTCGTTCAGCG CGACGATGATGATGATGCTACATTATACAGGAAACAAAATTAATTTAGAA TATTTTGAAAATTAATTTTCCCTAATAGTAAAAGCTAACTTTTATGTTTC TTTTTCTCTTTCATTTTCAGTTTCTTTGTTCATACCTTTTCATGCCGTTC GCATACTTAATGGGTGTGGAATATCAAGATTCTTTCCACGTCGGTGAAAT GTTGGGCACCAAGACGTTCCTCACTGAGTTCATCGCCTACAAACAACTTT CTGCAATGATCAAGAATCGAAAATTTCAGATCGCTGGTGGACTGCAGCTT TCTGTATGTTTACTCTGATTATAACTTTGATCTTGATTTAGATCCCTTAA AACCTTGACTAGTAAACCACGTCGTTGTATTTCGCTGCAGATAAAACTTG CAATAGGATCTATTTTTCTATATGTTCACTATCTTTCCAATCCACTCTCC CGCGGCAATTTCTATTTTTTATAAGAACTCTTTATTACTAGCAATTAGCC ATGGCTAAAAATGCCCTGCAGAGGCGCAGAGCATACCCAGCCCGGAGGAA CCAGGACTAAAAAAACTCAAAAGAAAGTACATTTGAAATAGCCATTTGGT CAAGGGCAGCTCCATTTTTCAGAATGAAAGCGAGTCCAATATTTTGCTAT AAATATTAGCCCAGAGGAACTTAGCCATGAAGAGAGCACGGGAATCATAA TCAGACTATAAATTGGTGAAATGAGTCTTCATAAAAAGTGCTCAATGTTA CTAGTTAAAGTTAAAAAACACGAGCCGATGCGGTTGTAAAATTTCCTCAA TAAGATCCATACATAACGAAAGTGTCAATCCAAAAAAAACAAGCATGTTA AATCTACACTTTCTGATGCAAAGTGACCTAAATTAAAACCACAGGTTTCG CAACATGTTAAGAACTAGAATGATATCAAAGTTGATTTTCTTCAATCACC AGATAAAAATCACTTTTGAAAACCCAAATATAAGAATGTGTACTGTGAAA CTGAAAGTGCTTCCCTCCCAATAAGAATACATAATGCAGATTAAAGGTGA ATTCCAAAATGAAATTGAATACAATTTCATTCATTTGATTTGAAATTTAA AAAGTAAGTAACTTTGGACTGGTGGCATACTGTAGATATAATTTATTTGT ATCAAAGGTTACTGAAAATTATCTGAAAAACTTTAACAATGTTTATACGT GTTTCTGCAAAAAGTTTTCAGTTTGCTTGAATAAATTTTCTTCATGATTA CTAAAGATTTGATAGTTGCTCTCAAAATTGGCAGTTGAATCAGATACTTT TAATAAAGGTATTAAATTTCAGGGATTAAATTTCCCGGATTTCACAGCCT TTGTTCTTATTTACTAAAGACCATAAAATAAAATCCTAAGAAAATCTGAA AAGGGGCCTTCAGCAAAAATTAGTCACCATGAAAATATTAAAACATCATC TAATCCGCCACTGTACACAATTTTTTTTCTATTGCTGTAATCCACTTCCA CTTCCCTGGCAAGCAAGAAAGCGGAGATTCTTCAACGAAATGACTGTTAA TATATAAAAATACCAAAACTTATTTCATCACTTTTTGAAAATAACTTTAC GTGGGAAAACATGAAAATAAGTCCTTGCGAAAAGCTTAAATTTTGTGGAT AGTGCTGGATGCCCAACCGTGAGTATAAATTAATGGTAGAATAAATTAAT ATGCGGAATTAATCAATGTGAATGGCTGAAGAATTGCCAAACTTAAATAA TGCGAATTAGGGCCTAATTAATTAATCCTGCATCAATTAATCCTGCATTA ATTAATCCTGCATTAATTTATCCTCGCATAAATTCATACTCTTAAGGTAA TTCCTGCGGAAATTGATCCAATTAAAGTAGTGCCAGACTTTTTATTTCAA CAAGTGTGTTTGTTTCGCTCCCATAAAAACAGATTCATCTTGTCTTCAAT CCATATGTTTTGAAAATAAAGGCCAAGGGAATTTCAGATACCGTGTCCCG TTGTAACCACCGTCAACATGGTTAAAACCTTTTCACGCTCATGCGTTCAA CATCAACACGGTACAGTGTGCAGTGGTGGTATTAGTAGAGAGAGTGTTTG AGTCTGTTCATAATATGTGACAAAACAATTCAAATTGAAATNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNTCGAAGTACCGTTCTGGCACAGTGGCATAAACAG CATTTTCAAAGTTTGCTAAAGCTTCAATATTGGCGTAAAGAATTATTCAC AAAATAGCATCAAATACTCCATAATCCGTCGTTTTTCAGCTTTTGTTCCG CTTCTGTTCCGCTTCTGTTTATATTTTTCTGCTCGCTGCTCCCCTATGCT CAACCATTTTTTTGCTGTAACACTGTGCTTCAAATGTCCACGAGAATGAA TCAGTTCATGTTAGTCATAGTATATTCTCATTGGCATGTCTCACTCACCA AACCTTCTGTAAGAAACTCAATGTTGGTACCAGTTTTTGGCACGTTTTGG CGCAAGGCTTACTCTTTGAAAAATTACTTTCAGCGCATCATGCAATTTCC ATATAGGGTAACTGGGTTTTGTCTTTCTACCAAAAATTTCAATTAAATTT CCTTCAAAATGAAGTCACTATATAGATAGACAATATGAATTAACGGTCAA TTTCCCTTTTGTCTTGTGAGTTTTGTCTTTATTGTTTCCATTTTGAGTAG TTGAAGGTTTTATACTTCTAGACTATATATACTTAAATGCAGTTAAATGC GATAAACTGTTGTGGAGATTAAATTTTGCGGATTTCACGGATTTGGGTGT CATCCCCAAAAATCCGCAAAATTAAATCCCATTGAAAATTTGAGTAGGCC TTATCAGCAAAAAAGTTTGTGCATTACTACGTGATACATAGAGATTACTT CATACTGTTTGTGTACATAAAAGTTATCTTTTCTATTTCAATGATCTTAA AGTTATCAAAAATAGCAAAACAAATTTTTTCCAGCAAGCTGCATGTTCTC ATGACAAAAGTTTTCCAAATTTTGAACGCATGCAAATGAAAAGTTCATGG TTCGCTACAAAAGTTTTCCATATTTTAAACCCATTCCNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNAACCCATTCCGAAGATAATTTCATATTTCACGACACGTTTTCCACAT TTTAATCAAAACGGAAGATAATTTCAAAGTTTACGATGAAAGTTTTTAAT TTAAGAAGTTATGTAAGGTGATTTCCAATTGTTTATATCCATATTCAATG TCTTTACGATTAGCTTACTTTTTCAGAGGTTGACATAACATTATTCATCA GGCCGCGCCTGGCTGTGGTTGTCAGCTTCAAAAGTTGGAAATAAGCCGCT ACCGTATATAATTTCCCCCTCAAAGAGGTTTCAATTACCAGTTGGGTGTC ATTGTTGTAGAAGAAGCACCAAGTAAAATTCAATCTATAGTTAATTTTGC TCCAGGTTCAAATTTTTCCAAACAACAAAATGAATCAAGGCAAGCCAAGG AACCTCAGTCAGAGTTTTTTAAAGCTGCAAGTGTTTCATTTTCAGGCACA ACATGGTCAGATTTCTCCAAAAATAATCAGTCACTTGCCCTGTTACAATT CATTTACATGTACAGGCACAATTCAAGTTAGTTTGTTGTCAAAATTGGCA AACATGTCTGTTTTTTCAAGAAAATGCATCTCTCATTCCAAACCAACAGA ATTGAAACAAAACATCGAATCCAGGGAGGGATAATAAGAAAACTTTATCA TCCACCATTTCTTGTGCCAATCAGACAAAAAACATGATCCAATTNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCCCTTAATATTCATTG TCGCGCGACTCGGAGATACTAAACGTTTTTCCCATCTCCTGCCTTATAGA TGGTTGAAAGAATGGAAAGTTAAAGGTACGCATACACGATAGCAAAACTG CTTCGCTCATGTACATTTGCTTCGCAATAAAGATTCAAATATACATAGTA TGTTTGAAAATTTGTTAGAAGATCGCCATTACAGAAGGAAAGTCTTTTGA TGGTATTGTAAAATTGAAAGTGTACAGTATCGTTATAATGGGAATATTAT GATTCATATTTCAGGTGCGCTCAGAAGTCATTTCAACATATGCTTTATGT GGATTCTCGAACTTTGGTTCAATGGGCGTGATTATGGGCGTTTTAACTGG TATTGCACCTGAGAAGAGAACCATTTTTTCGCAGCTTGTGTTTCGTGCAC TTGTGGCCGCTACGCTGGCTTGTTTCATGACAGCCTCAATTGCAGGTAAT ATTCAAGAAATGTAATTGATATCATGTAACAGTTGACTCTCTCTAATTCG ATCTTCAAGGGGCTAAGGATTTTCTTCGAATTAGAGAAAGATTCGAATCA CAGAAAGTATTTTATACTAATTTCTAGTTGATGTGACCAATATTTGAGTT CGAATTATAGAAAGATTCGAATAGTAGAGGTTTTAATAGGAGGGAGTAGA CTGTAGTTCATTCACTTTAACCCTATTCGTACTAGGGAGGGAGCTGTTTC TGTTCTGAGGTCAAATTAATGTTAATAGCTCCTGAAATAATAGAGCTTTT ATCAAAAATTACGTCATATGAAAAAGAATTTGTGTGCCAAATTTCATCCA AAAGACCCACTAGATCAGGGGTAGTACAGGGACAGCCCCCTAGTTTTGAA CCGCCCCTAAAAGCCTAGTTTGAATAGGGTTAAGTGTACTTTTCTTTGCT ACCAAGTGGAAACCTTGTCAGCGTAATTGAACTAACCCATCACTTGAAAG TGGTTTCACTGTACACATCACTTAAATTTCAGTATCATATCAAAATTTTA AATGTAAACCTTTTCTCTCGACTATCAAAAAGAATGAAAATTAAGTACTT GTAATAATATGACAGTGGACGGACTATCAATATCCTCCCGGGGGGTGGGT TACTTAGGCAAAATAGATGCCGGTATGTATGAGCCATAAGGATCCCTTTT TCACGTCTCCCGGAAAGGGTCATAAATTCTTGAAATTTGGACTACAATTT GAACAATTTTCGAAATTCAGTCTCTCTAAGAGTCGATTTTCAAACTTTTA CTTCATATCTCACCAACCTAGTACCCCTCTCACTGGCTCCTTGACTGTTA AAAAATCTCGCTTTCTTTATAGTTGGTTCAGTAATTATGCTGAAAAGTTT TTCAATGGCATCCGCTATTCGATAGGATATGCATGTAATTTTGTAATTTT CAACCGGCATATTTCCAGGTTTGCTTTATAAAGATTTAGATGTCACACCG ACCCCTGGGCCAACGAATGTGACGAGAATAATGCCGTAATTGGTTATCAG GTATCTTTACTTATTTTATAATGTATCTTTTGTATAAAAATTTATATTGG GTTTGATAAAATATGGTGATAAATAAAAAATATTAGTTGATATTTAAATT AAAAAGTAACATTTTCGTCGCATAATATGCTTCTCATCGTCAATTACAAA ATCTAGGAACATAAATGCTAATTTACTAAATGCCAGCTGGGGTTAACGGG GGGGGGGGGACACTTTCTATCATGGGTTAAAGATAAAGTCTGAATTATTT CCACTATCGATGCTTCTGCGCTAAAGAAAGCATGGATTCGTCTTATAAAA ACTTAATCTTTATAAATAAGTCTAAAAAATTTTTCTTGTCTCTACAAAGG AGACTAAATTCAAATTTTAAATCTTTTGAATATACCTCGGTATTGTTTGG TTTGGAAATTTCTGACCCAAACTCTTTTCCAAGTCACTCAGCAACAGCTG AACAAAGTCCCTCTCTCAAACTATAATGTATTTTTCATCAGCAGTTATAC CCACAAGCCTTTGCGCAAGGTTTCTTTAGTAGTTAAACCCACAAGCCATT GCGTAGTGTTTCATCAGCAGTTATACCCACAAGCCATTGCGCAGTGTTTC ATCAGCATGTATACCCACAAGCCTTTGCACAGTGTTTCTTCATGTATGTG ACATAATTACCTTCACGACAGCAGCCTTCTGCGTAAGGGCAATGCTTATT ATGTTTGACCCAAACCGAACAATTACTATAGGTATCTCGACATTTGCTGC CAACCGGCCGTTTTGTGGTCGTCGTTGCTGGTGGTAGAGTGGTCGTTGTA GTTTTTCGAGTGGTCGTTGTCGTTGTTTTAACAGCGCTAGGAGAACATTC TGGGTCGCATGATTTCGGACAACTTTTTCTGACGTAAGGTGAAGATTTGC AGAGACCGTTTGTTGCTAACACCGGACAGCATTTCATTGTGTCAGCACAT TCTGTAGAAATAAAATTAATAAATTATTCCCTTGCTAATAAAGGATACTG CTGTACGACTACTTTGACCTAAATTGAAACTCCTGAAATCCCGAATCATG CGTTCACATATACATAAATATGTTTGATTTAACAAAGAAACGTTAAATCC GGGTTTATAATTTTAATTTCGCTGAAGTGTATTCTTTTCATACAAGGCTG GTCACGGGTGGAGTGCCCCTTTTGTCAACTTCGTTCTTTTCCGTTCCGGG ATTTATCTAAGTCTAAAATAGTAGAAACTGAGCAACAACACCAAGAGCCT TCGATCTGACACGAAGCAGAAAGCTTTATAGTAAAAAGACCAATTCTCCC CAAAAACTTATCGGGCGGTTAGCCAAAATATATTTCATGCCAAACCCTAG ATATACTTGACTCAATCCTCAGCTACTTCCCAAGCGATATGTAAATTGAA AATTAAACACTTAATACAATTTCTTTTGAACTCTTTGTTTGCCTCATGGC GCTATTGCCCCGGTACGTTGGAGAACCTTTTTTGCTGAAAAATTGAAATT TCTCTCACTGAAGTAAAAACACATACTTGGCTTTGGCTGTGTTGTGGTGG TCACAGTTGTTTTACGAGTGGTTGTTGTCGTTGTAGGGGTGGTCGTTGTC GTTGTAGGGGTGGTCGTTGTCGTTGTTGGAGTGGTCGTTGTCGTTGTTGG AGTGGTCGTTGTCGTTGTTGGAGTGGTCGTTGTCGTTGTAGAAGTGGTCG TTGTCGATGTAGGGGTGGTTGTTGTCGATCTTACACCATTAGAACAATAC AATTTATTGAGCTGTCGGATATCAATCTCAGACATCCCTTCTCGTTGACC CAGCTTTTCTTTGGAATCAGATTTTGAAATGATGGTCATTTGATTCCAGT TAACTGCAAATGCATAGCTGAAGAGAAAGATGAATTAAAATTGACCCTTT AGACAGCTTTTAAGATATTCTCACGGGGTCTACGGTAAGCTGGCTCGACT ATTTTCAAACTAAATGGAACATCGGAAGGAGCAGGAGTTCAGTTATCAGC GGCGATTGTTCCATCATTTCTGAATTATTCATCCTTATGGTATTGATTTA CGATACTGTCTTTTTACTTACTTCCCATAATGCATCACAGATTTTTTGTC ATATTTTTCATTCATTCCCCATGCCTCATTCTTTCCATGTTTTTCGAAAT TTCCCTCCATACCTAGAAATAAAGAAAGTTTATCCAAAAGTTTTATATGA CACAAATCTTCTATAGTCATTTCTCGAATTAACCCAAAGGTTAATATTGC TTGCAATAGGAGGCACGTGGTCAGGTATGAAATATGTGCCTGATGTAAAA CGGGAGTAGTCCATTAAAACTGCAACCTTCTTTATCTTAAGTTTATTGTT TATATTCATGATATTCATGACATTATGTTTTATACGGAGGCCACTGATTT TGAATTCAAGCAATAAAACTAGTAGCAAACGCCCGGGCTATTTTGGGTAC TTCCGTATGAAACATTACACCATGAATATCATGAATTGCTAATAAAAAAC AAACTGATATGAGAAAGAAAAATGAGCATGAAAGTGAAATTGTGAACGAA AGTTTTTACCTTCCATGATATTCTTCCAGTTAATTCTGATATAATCATCT CGATCTAATCGTGCCTAATAAAAAATAAAGAGCCTTGTTATCATCTAAAC AGACATTTGAGAGCACAGCTTGAAGGATGATTGACAAAGATAGTGTGTTT TTTAAAAATTGAAAGTAAGAGCCTCTCAGATGCAGGATTCTCTGCAGAAT ATGAAAATATCCAAATTTTTCTACAGTCAAATAAAAAAGTGTTATCAGGC ACTGGCGGGTTTAAGACATGCGAAGGAGTACAACGCTCGTTAAAAGACAA TAAAATTATAATTACAAATCTCTTCTTCTGATAAGTTCGACGTGGTCTAA AACCGCCTATGATCAGGTANTGTACTTCGGATGAGAGGGTCAATTATTCT TAAGAAGTGCCAAAATTGAGGGTGAAATATTTTTAACGTAGGTCTTGTCT ATCTGACCAAGGAATAAGACCGAACGTCAAAGTTTCNCACACAACGTTGT TTTAACGTTCAAATAACGTTATTTGAACGTTATGAATGTCAAATGGACGT TGTTTTGACGTTGTGTGCCGGCTGGGTAGCGTCAAAACAATGTACATTTA ACAAACATCAATATCACGCCTCTTTTTAAATTTTTAGAAATATCTTACCT GTTCATGAAAGAATCCGAGGCCATGAAAAATTTCATGGATAACAACGCCC TTATAACCACACCCATGTCCAATTGAAATTTCTTGTTGCACACCGTAATA TCCAATCGATGACCAGCATCTATGATAATATAAATACAATAAATCAATTT TAATTAAAGGCTGTTAATTTTCAAAAAATTCGATATTNGGGTGAAGATTC CGAAAAAAGGGGTCCGAAGTCCTGAAAAGTTGAAGAAACAGCGCTACGGG GGTTTTTGGCACCCGTACAGGACTTAACCAAACACTCTCCCGGGGGTCCC CTTAATCTATGTCAGGTGTATAAGAGATTGAACTCTAGCCCTTCGGGCTT TAAACTCAATGGGTCACACCCAGAGTTATCAAATACACTCTTCCAATAAA AGCTATCCAAAATGCTGGTTTCAAATAAGGAGAAGCTTTGTTTTTACACT TTTCAACCCAAAAATATAACCTGAAAATAATAATTCAGGATTCAAAAGCT TTCTTACATACCCTCTACTGGTGACGAATTGAATATATCCAGCTTCATTT GTTCGCTTCTTGAAACGAATACACGAATGTTTTTCAATATCCGCCATCGC TCGACGAGTGACATCACCATAAGCTGTGTAGAAAACATAGTATAATGTTG ATATTTCTAAAGATTCTNGTTATGAACACATTGCAATTATCATGAATAGT AGGTCACACCAATGAAGTATAAGCCCAAAGGGCTAAAAGTCAATCTCCTT GGTAGGATTTGAAGCCAACAAATTCTACCAAAGTTGCGCTGCCTTGAGCG GCTCGCCTGGTTTTTACACAAATGACAGATTGAAACTAAAATTAACCGCT AAATTTCTAAAAAAATATCAATCGTAAACAAAGGCTTCACTTTTTCTTGC CTGAAAAAGGTTAGAGATTGAACTCTAGCCCTTCGGGCTTTAAACTCAAT GGGTCACACCCAGAATTATCAAATACACTCTTCCAATAAAAGCTATCCAA AATGCTGGTTTCAAATAAGGAGAAGCTTTGTTTTTACACTTTTCAACCCA AAAATATAACCTGAAAATAATAATTCAGGATTCAAAAGCTTTCTTACATA CCCTCTACTGGTGACGAATTGAATATATCCAGCTTCATTTGTTCGCTTCT TGAAACGAATACACGAATGTTTTTCAATATCCGCCATCGCTCGACGAGTG ACGTCACCATAAGCTGTGTAGAAAACATAGTATAATGTTGATATTTCTAA AGATTCTAAAGTTGGATAAAACAGTCCTGCTGTACATCCCTTTAGTAGAA CACCCCTGTCTCACAGCCCAGTGGAACTTCATATCGGCGAGGATACAAAG TCCTATTGAAATCCCAATGGGGAGAGCAATTACTTTGTTCCAAGGCTCAA AAATCCAGTGTGGATGGTTTTAGAGTGCAATTTTTAAACATTGAATTTCA AGTGGAGATAAAATCAAAGTCAATTTCCAAGTTGGGCTGAAATTCCAGGG TATTTTCTCCCTGGGGACGAATTTTTTACCCAATTTCACAGTGGGGCTGG GGTCCCAGCGATGGGGTGTAGTAGAGGGCTATTAAAAGGTTTCCTTTCCA TTTAACTACACAGTTTGTGGAGGACGGTGTCATTCCTTACCTTAAATTTC TTCAACTTCTTTACTTAGCAGTTGGCAGTCATCAAGCTGGATGGTCTACC TTTATGCTACGGTCAATTCATGTCAGTGAACTAGGCTGATTGGAGAATTC CCCTATGGAACATGTTTTTAGTTTAATTGCTACTTGAATCAGTTTACTTA CCAAATCCAGACTTGAAAACATAAGGAACGACAGCATTGGGCCATTTTCT TGTCTGCACCACGTCAGCAACTTTCCCCGTTGGATTTCTGTTATCTTGCT GTCGTAAATATTTTCGCAATTCTGGTGTTAATACAATGTCTGCTTGGAAC AAGGATCGACCTAAATTGTATGGAAAGTTGAATTTTGAATTGAAAATCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030774XLOC_030774Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048367-exon-scaffold_142-1575043694:453894..454377TCONS_00048367-exon-scaffold_142-1575043694:453894..454377Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1575043694:452959..453100TCONS_00048367-exon-scaffold_142-1575043694:452959..453100Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1575043694:451912..452069TCONS_00048367-exon-scaffold_142-1575043694:451912..452069Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1575043694:450690..450851TCONS_00048367-exon-scaffold_142-1575043694:450690..450851Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1575043694:450164..450414TCONS_00048367-exon-scaffold_142-1575043694:450164..450414Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1575043694:449658..449826TCONS_00048367-exon-scaffold_142-1575043694:449658..449826Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1575043694:449225..449407TCONS_00048367-exon-scaffold_142-1575043694:449225..449407Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1575043694:444533..444713TCONS_00048367-exon-scaffold_142-1575043694:444533..444713Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1575043694:443478..443559TCONS_00048367-exon-scaffold_142-1575043694:443478..443559Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1575043694:438278..438609TCONS_00048367-exon-scaffold_142-1575043694:438278..438609Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1510915933:453894..454377TCONS_00048367-exon-scaffold_142-1510915933:453894..454377Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1510915933:452959..453100TCONS_00048367-exon-scaffold_142-1510915933:452959..453100Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1510915933:451912..452069TCONS_00048367-exon-scaffold_142-1510915933:451912..452069Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1510915933:450690..450851TCONS_00048367-exon-scaffold_142-1510915933:450690..450851Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1510915933:450164..450414TCONS_00048367-exon-scaffold_142-1510915933:450164..450414Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1510915933:449658..449826TCONS_00048367-exon-scaffold_142-1510915933:449658..449826Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1510915933:449225..449407TCONS_00048367-exon-scaffold_142-1510915933:449225..449407Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1510915933:444533..444713TCONS_00048367-exon-scaffold_142-1510915933:444533..444713Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1510915933:443478..443559TCONS_00048367-exon-scaffold_142-1510915933:443478..443559Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1510915933:438278..438609TCONS_00048367-exon-scaffold_142-1510915933:438278..438609Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1491911889:453894..454377TCONS_00048367-exon-scaffold_142-1491911889:453894..454377Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1491911889:452959..453100TCONS_00048367-exon-scaffold_142-1491911889:452959..453100Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1491911889:451912..452069TCONS_00048367-exon-scaffold_142-1491911889:451912..452069Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1491911889:450690..450851TCONS_00048367-exon-scaffold_142-1491911889:450690..450851Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1491911889:450164..450414TCONS_00048367-exon-scaffold_142-1491911889:450164..450414Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1491911889:449658..449826TCONS_00048367-exon-scaffold_142-1491911889:449658..449826Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1491911889:449225..449407TCONS_00048367-exon-scaffold_142-1491911889:449225..449407Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1491911889:444533..444713TCONS_00048367-exon-scaffold_142-1491911889:444533..444713Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1491911889:443478..443559TCONS_00048367-exon-scaffold_142-1491911889:443478..443559Clytia hemisphaericaexon
TCONS_00048367-exon-scaffold_142-1491911889:438278..438609TCONS_00048367-exon-scaffold_142-1491911889:438278..438609Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:438278..454377 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.44391 0.964793 1.24739 2.59058 0.448771 0.0555188 0.497032 0 0 0.535731 0.650144 0.000429562 1.20418e-07 0 0.350082 0 0.863973 0.000156021 0 0.794756 5.1274 5.38376 2.0484 1.44372 0.107538 1.59083 0 0.753157 0.549477 0.807749
Blast
BLAST of TCONS_00048367 vs. Swiss-Prot (Human)
Match: S28A3 (Solute carrier family 28 member 3 OS=Homo sapiens GN=SLC28A3 PE=1 SV=1)

HSP 1 Score: 375.555 bits (963), Expect = 7.295e-119
Identity = 193/387 (49.87%), Postives = 270/387 (69.77%), Query Frame = 2
Query:  665 RTEIGFNVFKWLGDRINILLSFSGPGTELIFG---KSDVFAFAVLPIITYFSSLTYVLYYLGFMQVIINKLAWILQITMGATATESVNTAGNIFLGQTESLLLIRPFIPKMTKSELHALMTGGLATIAGSLMALYIIFGVSASHLLSASVMSAPAALAMSKLMYPETEEPEFV--GEVKTEATEERNIFEAIAVGASLSXXXXXXXXXXXXAFVSIVSLFNGLLSWLGSMVDCPQLSFEFLCSYLFMPFAYLMGVEYQDSFHVGEMLGTKTFLTEFIAYKQLSAMIKNRKF---QIAGGLQ--LSVRSEVISTYALCGFSNFGSMGVIMGVLTGIAPEKRTIFSQLVFRALVAATLACFMTASIAGLLYKDLDVTPTPGPTNVTRIM 1795
            RT+ GF  F WLG ++   L ++  G   +FG   K   FAF VLPI+ +FS++  +LYYLG MQ II K+ WI+ +T G++  ESV  +GNIF+GQTES LL+RP++P +TKSELHA+MT G +TIAGS++  YI FGV +SHLL+ASVMSAPA+LA +KL +PETE+P+      +K E+ +  N+ EA   GAS SI ++ N+ V +IAF++++S  N  LSW G+M D PQLSFE +CSY+FMPF+++MGVE+QDSF V  ++G KTF  EF+AY+ LS  I  RK    +   G+Q  +S+RSE+I+TYALCGF+N GS+G+++G LT +AP ++   +    RAL+A T+ACFMTA IAG+L      + TP   N   ++
Sbjct:  245 RTDPGFIAFDWLGRQVQTFLEYTDAGASFVFGEKYKDHFFAFKVLPIVVFFSTVMSMLYYLGLMQWIIRKVGWIMLVTTGSSPIESVVASGNIFVGQTESPLLVRPYLPYITKSELHAIMTAGFSTIAGSVLGAYISFGVPSSHLLTASVMSAPASLAAAKLFWPETEKPKITLKNAMKMESGDSGNLLEAATQGASSSISLVANIAVNLIAFLALLSFMNSALSWFGNMFDYPQLSFELICSYIFMPFSFMMGVEWQDSFMVARLIGYKTFFNEFVAYEHLSKWIHLRKEGGPKFVNGVQQYISIRSEIIATYALCGFANIGSLGIVIGGLTSMAPSRKRDIASGAVRALIAGTVACFMTACIAGIL------SSTPVDINCHHVL 625          
The following BLAST results are available for this feature:
BLAST of TCONS_00048367 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S28A37.295e-11949.87Solute carrier family 28 member 3 OS=Homo sapiens ... [more]
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