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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048322 ID=TCONS_00048322|Name=TCONS_00048322|organism=Clytia hemisphaerica|type=transcript|length=170bp
ATTATAATGATCAAACTTTAAATGACATGCAAAAATAAATGTACTTCCGG
TTACGGATGCTTAGATGGAAAATTCGGTGGGATGAAATGTGGAACGGTCG
CTCGTTGTCAGCAATGTCCGGGAATTTTGCAAGGTGGAAAATGCATGTCG
CAGAAGACACGTTGTCCAAC Run BLAST on NCBI transcript from alignment at scaffold_142:869444..870646+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048322 ID=TCONS_00048322|Name=TCONS_00048322|organism=Clytia hemisphaerica|type=transcript|length=1203bp|location=Sequence derived from alignment at scaffold_142:869444..870646+ (Clytia hemisphaerica)
ATTATAATGATCAAACTTTAAATGACATGCAAAAATGTAAGTAATTTGGA
TGATAGTTATTAATCCCTCGGTTGAATTGTTTGGAAAAATCTTAGATTCC
TCTCAAATTCTGACAAAAAAAACTATCACAAAGATGGAGAATTCTTCATA
TTGCGTCTTTGGCGTGATTTAGGGTGTTTCTAAGTTTGACTAATAGGCGT
TTTCATAAAATACGTCaggaacatcacttgcctcataTTCAAACGATTAC
CATGGTGATCATGTCCTTTAAGCCCCTTACTACattaaatgatattttta
taaatataaagtaGTTTTAATGAAACCTTCTGGGAGTTagtcaccatggc
aataatatCAAAACGaggaggcaagtgatgttcaagacgtaatttatgaa
aaaggtctattactcTCTGCTGTATATGACCGAACTATATTATTTActct
taggcgagaccaatttaatttgttgttctacgggtagatcgttagcaaat
tatgagtcggtcggtcggtaaaatgaaaataagattttcattaatcaagg
aaGGTAATTGGGCTTTAAgtgatattttcaaataatcttggtcgaaaatt
catcattcatttttttgatggagtttgtagtaaaatctttcgtgcataga
attcatgattctagattattttcaactttttttaagtccaaattttttaa
ataattagtattagaaatttgtggcataggaaattcaatattattatttt
ttcgtttgcagCAAATGCTGGGTCGGTcgcgcccgtagaacaacaaatta
aattggtctcgccttaatCTTCGTTATTTTACTCTTTATTAGTCATTCCA
CAAGAAATATCAAAACGTTCATTCAGTTGCCCACCAGTCGAGGTCTGCCA
ACCGAAAGTACACCGAAAATGCAAGAGAACTGGCAGAACGTCCTTTTTCT
GCCTATACTACAAAAATTGTCGAAAATGTAATCTAAAAGTCATCTCTGAA
GGCCGATGCAAGGTGTCAACATGTCGAAACTATGGGAAACCAACAACTAG
ATGTCCCGTTTATTTTCAGAAATGTACTTCCGGTTACGGATGCTTAGATG
GAAAATTCGGTGGGATGAAATGTGGAACGGTCGCTCGTTGTCAGCAATGT
CCGGGAATTTTGCAAGGTGGAAAATGCATGTCGCAGAAGACACGTTGTCC
AAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048322-exon-scaffold_142-1491911889:869444..869479 | TCONS_00048322-exon-scaffold_142-1491911889:869444..869479 | Clytia hemisphaerica | exon |
| TCONS_00048322-exon-scaffold_142-1510915933:869444..869479 | TCONS_00048322-exon-scaffold_142-1510915933:869444..869479 | Clytia hemisphaerica | exon |
| TCONS_00048322-exon-scaffold_142-1575043694:869444..869479 | TCONS_00048322-exon-scaffold_142-1575043694:869444..869479 | Clytia hemisphaerica | exon |
| TCONS_00048322-exon-scaffold_142-1491911889:870513..870646 | TCONS_00048322-exon-scaffold_142-1491911889:870513..870646 | Clytia hemisphaerica | exon |
| TCONS_00048322-exon-scaffold_142-1510915933:870513..870646 | TCONS_00048322-exon-scaffold_142-1510915933:870513..870646 | Clytia hemisphaerica | exon |
| TCONS_00048322-exon-scaffold_142-1575043694:870513..870646 | TCONS_00048322-exon-scaffold_142-1575043694:870513..870646 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_142 | supercontig | scaffold_142:869444..870646 + |
Blast
The following BLAST results are available for this feature:
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