TCONS_00048289 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048289
Unique NameTCONS_00048289
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1156

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048289 ID=TCONS_00048289|Name=TCONS_00048289|organism=Clytia hemisphaerica|type=transcript|length=1156bp
AAAAGCTTGAAAATAATGCACTTGAAATGTCACCAAATCTTTAAATGTAA
ATAAGGAATTGGGATTAAGCCttaatgtaaacattcgaataaGTATAAAT
GTGGCAGACAGAATGGTAGGACGTTAAGCAGTGTCGAAACTAATCAAGGA
AGACTACTACAACCAGTAGAGAATAATCTTTTAaagttgaaattcaaaat
ttttggaaagtgtCACCAAAAGATTTAAAgaaaatgcatgTATTGACAAA
ACAACTCTTTTTGGTCGTCTTAACATCGTTACTCGTGATATCAGAAATGG
CGCCCGTTGCATCAGAAGAAACAAACAATGTTGAAAATCCAACAGAATCA
CCATCATCAACAGTTTCGACTACCGATCCTACCGATCCTACCGACAGCTC
TTCGGGTGGCTCATCTTCGGGAGGATCGGGATCATCAAACCCACCGAATC
CTCCACCATTTGATTCTTCAACCTGTAATTGTGGAGTCATTGCTGAAGGT
GCTCAACAAAGTCCTTACCTTGCAGTATCATGTGAAATTGGTGCTATTAA
TTGTTGTTCTTATTGTCAAGGTCAACCGAAAGATGTAGAAGCAAATTACG
AATGCGTTGCTATACATGCTTTTACGAGATCATTTTTCGGCATTCCACAC
AGTCACGGATGTCGATATACTATTTCAAGTGGGGCAAATGTCGCTAAGTG
ATTTAACATCCACAGATAATATTGCAGGGTGGAATAAAACGCTTTGTCAT
CGTTGCTTGAGAGTATATCATATTTGAGcttcaaatttcatttaaaaaac
aagttgaaAAGGAAGCGAGAAGCTCTACTTTGACGTGTGCCAGCTGGTAA
TAGTGCCAACAGACTGTGAATCTTTGGCATATTTTCAAGACATCAAGCCA
CgagaacaaaaaattattttctaaaagGGAGTTTTTTATCGACGAcgact
aaaattgaaaaattattttgtatcataaaataaaagaagattttataaat
atcataaatataaattaattaaattgttttgttactgttcatgtttttat
ttttagtttttctttttgtaaatgaTTTTGAGAATTGTTATTTATTGTAT
ATTATTGTATTTCGGTATATTAtatgaaattatttaaaagaattgACATA
TAGAAG
Run BLAST on NCBI

transcript from alignment at scaffold_142:402023..414251+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048289 ID=TCONS_00048289|Name=TCONS_00048289|organism=Clytia hemisphaerica|type=transcript|length=12229bp|location=Sequence derived from alignment at scaffold_142:402023..414251+ (Clytia hemisphaerica)
AAAAGCTTGAAAATAATGCACTTGAAATGTCACCAAATCTTTAAATGTAA
ATAAGGAATTGGGATTAAGCCttaatgtaaacattcgaataaGTATAAAT
GTGGCAGACAGAATGGTAGGACGTTAAGCAGTGTCGAAACTAATCAAGGA
AGACTACTACAACCAGTAGAGAATAATCTTTTAaagttgaaattcaaaat
ttttggaaagtgtCACCAAAAGATTTAAAggtaaataattttgatttccg
atttatttttggcaattttgctaattttaaaggtttgaatacacgttttt
tataagaacatcctaaatttttgaagcaacatcctaaatttttgaagcct
tcggttATTCCCCAGGGgagggggcactcatatggtccgacccacggcat
gtgtCACctttaagggtaggtttttcgagacccttgaaatgcactgtaag
ggtgtacttttgatagagtgcactacaggggtcttcttttagctggatac
actgtaagggtgtgtttggggacAGCTGAATagcaagtctgacagtaaaa
atttgATCTTTATTAGTTTTGACTTGCacccatttcaattttttacacat
tgtgtcgacatctcagCCTCATTTTAAGGTAAATTCAGCAAAacaagata
tgaaatcaaactacactgtaagcgGGACTGTTAGTGTTGTTAGGGTTAGA
AATGTTTgataaaatgcactgtaagggtacctttttcctgctcaagggct
gcactgtaaaggtccgattttgaaagccatttttttggcggcacatgttG
TCGTTTAGAAACCGAGTGCTCCCGGGGGTTATTCTTAACCTTTtgtagtt
ttaagcctaaaaactttcTGAAGTTGTTCTTATCATTTTGTCTATCAAAG
CCTGaggttcttatatagtttacttttataaaaaaacctgtACTAAAGAT
GTGTAATGATTAAACATCAAGTTGATTGTCCAAGAGGAGAAATCCAAGGA
AGAGTGGTGTCCTCCCCTTTCTCaggtcccgggggggggggggggggggg
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNccccccccccgggtctcaGGTAGACAG
CTAAGTAATATGAAAAAGAGCCATTATTGACTATGGCTGCTTAAACTTAC
TACTCACCCTACTAGCTAAAACTTACTAAAATTCTTAGATTAATGTTTTA
AGGActcccccttctcacagacccggtaggatttttcagccagtggggat
aaaaataacggactgaaactcgatggggatgggatcgatattcccatatt
tttatggccgggaatttcaattcttttgttttcaagtcaaaaaattcagt
ggggatgggacaaaaatagcataatgttttgcagtgaggattgggtTATT
TGACTactttcagtggggacaaaaattggatgataattttccactgggtt
cgatattttggccaatttttccagtgggaaaagggttcccagtggatctg
tgagaaggtgTCTAAGGTAAAGAACATAGAGCATGCTATTGAGTTATTTG
CTGTTACTACTATAGCTAAAATCTTTTGGAGAGCGTTTTTAGTTAAAGAA
AGCATCGTTTATCATCAGCCAACCAGTTAAGTCATTTAAGGAGAAGTGAA
AATCAAGATAAATCAGTGGGAAGTCTTTTGGCAGTCTGTTTGACCACTTT
TGACGGCTGAAGCCAAGATTTTTTCCGTTCGTTTCTAAAGACAAcagttt
aaaaaagatttaattgCAGGTcaaacgtcatcaaaatttccattatgaat
caaatcaaatcaaccaGTTTTTTAAACCTGTTGGTCTTATACATTCTAAT
ATTTAGAGTTTTTGGTATAAAGCATAAGTTTCCATGGAGGctgttttgtt
attgtttttgcaAGGGCACCCCACTGAAAACACTTACCTCAAAAATACGT
CATCAAATATCTAACGGATAGGTCATTTAGGATAAGGTAATCAATAAATC
ATTGATAATGAGATGGGATAACCCACAGTTTTGAGCTCCTAAATCTCGTA
ACATCAATCACCATGGCTATCTGATAAAGACAAAATGAAGGAAAAAGATC
AAACTGAtaaaatcatttgaaaatttagaagaagaaaataaattgataaa
gTTTATTGTACAATGAATTAATGCCACCAAAATCTATGTATGAGAAAATC
CTGTTATAGTTAGTTAAATCAGAGGCGGAGGTGCGcttacaattttttga
aaggtgGAGAGAGggcgaaaatatttttgggagtCAATTTTCAGAAAGAA
TTTAAAGCGATAACATCTACCCCTCCTCCTACCCCCAGGGCGTATAACCA
ATCGCTAAATTATTACTATTTTCTGCGACTCCGTGTTTGatctagcctgt
accaaactcttcttcgctgactgaaaagataaaggcaagttttttcaaaa
tataaaaaatgccCGTGGCAGCGGGGCTGTACAGGTTATGTTTGATCTAG
AGTGCTTTCTTTACGGTATGCAGATATTTTTGCATTTAAGATTAAAGATT
AGATAAAAATTAAGGGGACATATAGTAGTTTATATAAACTGATATTATCG
TTTTATCATATTACACCCATATTACAGCATAACATGGATTATAAATGACT
CAAGCAGTCTAAATGAAAGTCTTCCGCGTATAACACGTGTTGTAATATAA
GAGTAGTATCAATTTTAAACAAATACAAATCAAACAGCAGTGATAGGAAG
TGAAAGTAAAATGCAGCAAGCACGAGGACTTTATCAATTATATTTTCATT
AAAGGATCTTTTTAAGATGATTCAGCAATTtatcttcaaataaaaaaaaa
acctaaaaatgtaaCTTTCGTGTAGGTGTATGCTAATTTAAAAACGCTAA
TCTATAAACCACCAATGTTAATAAATACCTTTCAATATAATTTATAGCCC
ATGGAAGTAGAATCAAGTCTTTGTTGTATCATCACTTGACAAACAACATT
GTTAATTTAGTGAAGACCAAATCAGATCAAACCACCTGTGCGCTCAACTT
AGATGGTCGTTAAAACCCTTTAACTGCctatgtcggcatatgccgacatg
agcattttcgatttctttgccgatgTCGACAAATAACGAGATGCGAAATC
TCGAAATTTGCCAGAAATTTATCATTTTCTACAGAGATTTTGCATTAGGt
ggtttgaaatgaaagaaatgaaTAGTTACAAACTTTTcgatgttgaaaaa
taactattctacaatgttcaactcaaaattatagtcgTTGTGATACTTCt
tatattattcagaaaatgaagtgaaaatcgCTACCTTATGCCCATGTTGG
CATCAAATAGTTCGAGGTGTGAAAAAATGTCCCGGCAAATAGGTTGAGGG
GTGAAAAAGAagatcggcacttaaagggttaacctTTCCGCCacgctgtt
ttttatattttcacgctgtcccaacgcaactttttttgagaaaacgcaGT
GTTTGGTAAAAGTGCCATATCTCAAGAACTAGAAATCTTTTGGTAAAGAA
TAAGctatccctgaaaagctaattaaattcTGCAGCTTTTAGGTTGGGTG
AAAGTTCAATTAAATTACTCTAACTAAAATGGTAGCTCTACATTCACCAA
TGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCACAAGGGCTTTTCAAACATTGCTCACTTTTCTca
gaaatcagtgtttttccgtccgccatcttgaatcagtgtttttatttgaa
aagtgctGACTCACACCGTTAtcataacattacatcattattACTTCACG
GAAAGCTTAGACtctctactttctttttcttcttttttcaacgaTCAGAA
AGCAAGCCAATCAAAGAATTGCGCGAGAAAGACATGCCTATCAAATTgcg
tatatgtacggcattcgggacgtctcaaggacgtatatgtacggcattcg
ggtTCAAAAGGTTAATGATTATTAGCTTAATGAAGGCTTTACAAGTACAG
TATTTCACATACGCCCTGGAATGCCATAATACAACAACAAATTTAGATAT
AAAGTTCAACATGCTGAAGTTTTTTAACCTGAAATTGACAGTTCagacat
tttcataatttttattactaagtttttatttttactgtttttctatagaa
atatcattcccttgagaacggaccgagtccgaaacatgtcgggaaaaatc
aaaatataatagccgcattctttttcaccgtccaacattGTTAATTTAGT
GAAGACCAAATCAGATCAAACCACCTGTGCGCTCAACTTAGATGGTCGTT
AAAACCCTTTAACTGCCtctgtcggcatatgccgacatgagcattttcga
tttctttgccgatgTCGACAAATAACGAGATGCGAAATCTCGAAATTTAC
CAGAAATTTATCATTTTCTACAGAGATTTTGCATTAGGTGggttgaaatg
aaaaaaatgaatagttGAAAACTTTTcgatgttgaaaaataactattcta
caatgttcaactcaaaattatagtcgTTGTGATACTTCttatattattca
gaaaatgaagtgaaaatcaCTACCTTATGCCCATGTTGACATCAAATAGG
TCGAGGTGTGAAAAAATGTCCCGGCAAATAGGTTGAGGGGTGAAAAAGAA
GATCGGCACTAAAAGGGTTAATGATTATTAACTTAATGAAGGCTTTACAA
GTGCAGTATTTCACATACGCCCTGGAATGCCATAATACACACAACAAATT
TAGATATAAAATTCAACATGCTGAAGTTTTTTAATCTGAAATTGACAGTT
CAGTTCAggcattttcatgatttttattactaagaattcttaacattttc
aaaaattagctaATCGATTTTTTTGGCAGCTTATCCAAAACAAACAATTA
TAAATAAGTAATCTTTCATAATTCCAAAATCTAAACCAcgaacaaaattt
tttgaaacatagTAACTGTAAACAaggtcattttcaaaaatcaatttgaa
attccATTGCTGGCAGGAATAACGTTAGATGCATCCATTAACTTAGTAAT
TACTTTAATTCTAATGTTTTCCCTAAAAAATCGCGTCTTGTAGTATGTAA
ACTGCCTTAACAAGAGACAAGCTGAAACACATAAGTGTTTgttgatgtaa
acaaaaaacgtgtaaaacatTACCAAGATATCTGTGAATAAAATCCCGCG
GGGGTGGGGGTTGTGCTTGTACACATTTGAAAAGACAGGGCTTGAAGAAA
GAAAACGGGCATAGACATATCATGAACATCTTTAACTAAAATGTCTTTTA
GAACTCGAActagttttctcgtcccttcagttaggTTCAGTTAACATtgt
cttataaaccttactctataactcgaaatttccaaaacttgaataaattt
gtgttccccgtgtgggttcgagttatggagactcaacttGTATCGTCAGA
ATGGTAGTGTAAACTACGATCAGATAAAAACTATCTAGGTTCTTTGCTCA
TGTTCATCAGATTTCCTGTTCCTCGTCACTGGCCTGTTAAGATTTTAATC
AGCACAGTCTCCAATATACTCATAGGGGTGACTCGAAAGTGTTTAAAAAT
CTAACGAGTCTCTTTCCTGTTAGGCTTAATGAATAGGTATTCAAAGAATT
TATAAAATTACAATTAAAATGATGATAATAtataatttatctttttaaaa
gaTAAACAAGTAATTATCTGACATAGTGATATGACCCCAAACAATGGGAC
CTTACAGTGACGTTTACTTGAGAAGGAGGGGAAGtattctaaatatataa
atcacgtacggaaaaatcaaaatcctGTCATTTGACTTATCTGAAAAATG
CGATCAGTTTTGGCAGACATCTACAAACGCCTCTGCACTCTATTCCGTTT
CCTATGTGTAGATTGGTTAGAATGACGAAATAATGACTTTCCGACTTTTC
agattttgctttttctttttcaaatcaaaagaacATTTCTTTTACTGCTA
GTCTTTACATGTCATCTTTCTGCTCAAACGACACTGATTGAAAGATGTTA
ACTACTGGTTTTGGCGATTGTGACCAGTAACAACATGACACCCTCTTCTT
AATTGACTTGATTGAATCTTAATTGACACCCTCTTCTTACAGATCcgctg
gaaaaattggccacaTGAtcatccccagtggaaaattatagcccaatttt
ctgaattttctgacttgaaaacaatggaattcaaatccccagcctaATAA
AAACATGAGAATCTTAACCCCCATCGAGTTTCGATGTGTTATTTTTACCT
ccactgactgaaaaaaatcttaccgggtctgtgagtaAGGGGTGTCAAAA
AGTCCTAGATGACCGATCTGCTCATCAAAAATATCGACCCCAATCTATCT
ACAAGAATAGAACAAAATCGTTTACGAAATTGACCTCGACAATTATCGGT
GTCACATTTAGAGACGCTTTTATAAGTTATAGCGGTAATAATTTTCTTCA
TAATTTTCTAATCAACGTGATTTTGgtgtttatataataattctttcaaa
agttactCTTCCCAAATCATTGAATAAACAAGTATTATAGATCCAATGAC
CTGAGCGTATTTTCGTGATGCTGCCTTTTACAGCAAAGTATCATATAGCA
TTCCAttaaaggaaaaatgaaaacatctaAATTGTCGGTGatcagtaaaa
ttttcaaaataaattgttCGATTTCTTGATCTGAAGTTTTTTGCTAGACC
TATCTAAAACAGATAAAAGCGAGTTTTCTTTCACAGTGGGTTcaacaacc
aatcaaaatgaagcttcaaaAAACCTTCATCCTACTTCAAAGCTAATGGT
GACATCGTATTTAGAGATTAAAAAGCAGTCATTTGAGAGATTGATTACCG
CCTAATTTATATACCATTGAGGTTTTATAAACAAGTAAACAAATAATTTC
TAACGGAAATAACTAAAGTCATTTctctaattttcattttgtcaaCACCA
CGTTTTACTGTCAAACTACAGTATTAAATTAAGTTTCACTGGAGAAGCAA
TCTTGAAAGCTTCTCATTAGCAAAGCATTCCTAGTGTAAGCAATGCTTAA
TCTAAGAAAGTTCGGTTTGACCTCGTCTCCATGTAACCCAAGCTTTATTA
CGTTACTGATGGGAGCAGAAAATCGTCCAAAAATAAATACGATGGGATAC
TAAACTGGGTACATAGCTCTAAATTTCGAACATCATGATTTGGTTTCTAT
TTTGGCTGAGATAAGGCCTTTTTAGATCAACCTAACGAAAAAGGATTTGC
TCATTAAAATAAGTCACATCTAATTTTAGGGCTCTAAAAGGTCCTGTGCA
TTTAACTTAGTGACGCAGTGACGTGAATAACGGATTAGTTTGGCTCCATT
ATTCCCTCCGATTACATTGTTTTTGCTTCCCTAATGAATTCTATAGCTTT
TCCACTGGTAACCTAGAGGATCCGCAAAGAAGAAATTGGATTATAGTATC
TGACGCAACAAATTCATGTcgtcatttttaaaaaatgcgAAAAGGCTTGG
GTTCTAGATCACGAGTTTCCGAATATTGGGACATTCCGGAATCTCCAAGG
CTGTTTTCAAAGGCTTTGAAGATATTCAAAACGTCCTAAAAGCTTGTAAA
CCAAAAGGAAAGCTCTCAATATGATGGTCCTAAAATAATTTTCCAATATA
GTGATCTTTCATAATAAAATCCGATACGTTAtatcatcaaaaaatcaaaa
acttgaaattttgccaaGATCAAATGAATCAagccaaaaattttcaaata
aagaacATCCCAATTTGATATTATACGAGTATGCAAAAATATGTATAAAA
GAAGAATGCCATATAAAGAAGACCGTATAAGATCTGAGAACTGGACATTG
ATATTGCAACGTTCTGTGATCTACGTCAAACAATAGAAACACGCCGGTTT
TCCGatatggaaaaataaaattaaaaacaaaacaaaagaatcagcAAAAA
ATGCTGAGAACACCATGGAAAAACTAAGAATAGATCTTTTTCAGAAGAAC
CAGCGGATACTGTTCTGCACAAAAGTCATTGTGTGATAACCGGGGTATGT
CCGTATATCAATATCAAAATGCTTTTGTGTTTAAAACGAAATCTCGTTTT
AATTGGTAGTTAGATAGAATCAGAGGCGATAACGACACAAACCGGAAGAG
catacaaacaaaacaaaagagaagacattacattttaaataatataaaaa
tggCGAAAATGCCAGCAACACAAATCAATTTGGTCATTAACTCGCTTTGA
TAGGGTTGTATGTAAAGTTGTTAATTTGAAAAGAAGACAAGACAtcaaca
cttttttaaaaagaagttTTATATTCGAGAGAGCATAGTAGATATTGAAC
TTTTGAACTTTGATAGAACGCGGAACTTAGATTGGATTCAAAATGGTAgg
tgtatatattttttctgaaCTAGATATGTAGCGTGGTTTTGATCCCGCGT
GTAGAATGACCACAAGGAAAAACAGAAACCTTTTAAAGGTTAGATAGAGG
GGCTATTTAGGAGTTATTAGAAATTAATTGGATTCAAATAGGTCACTTAT
TATGAGCTATTACTGATGCCGTTTGCTAGCCATGTGTTTAGTTTTAGAAA
TTGGTGTTTTTACAGTTGCGCGATTATATAACTATCGTGATATGAGTGAA
ATTGCTGGATCATTATTCGTTATTACTTGGGCAATATCAACCCCAAAGCG
GAAAGCAAGAGGATCTGATGATTTTTCAATGGGCGTTATATTGTGTAGAT
ACTGATAGATATACTAAAACAAATTTGGTTTCCGAATTTTACGATTTGAG
TCTCTTGCGAGAGCGATAAACTGCTTGTTTCAATCCTCAGTTGTATATCT
GAGCGACCTTGCTATCGCTTTTAGACTTCCTCTAAAAGGCAAGAACTGAG
GAGCTGATAGTCGGAATTAACAACATTGAAAAGCATGTTTGTATAATata
tcttcctttttctttcagaaaatgcatgTATTGACAAAACAACTCTTTTT
GGTCGTCTTAACATCGTTACTCGTGgtaagtcatttttcatttgattatt
ttcagattttcatgtGTTgacaatttttgtcaaaataaataaatggtAAG
GAAAGTGGCCATTAAAAATCCATCAATAACCTAAGAATCTAATCACCAAC
GCACTGAAATTGCGTCGGTAACTATTTAAAGATATTCACgctaatttaaa
aatttctataatttatCATGTGGTATAAATTGGAAAAACGCAAAACAAAT
AGTTTCCTGTGAAGAAGCAATCTTCTTATCTCACGCTGTTCTTTGATTGT
GAAATTGATCATATCATGTGATATTCTTAACTTAAGTTTCGACACGCTGT
TTCGTCATCAACTATTgatcaattttctaaaaaaaaactacAATTTATTA
AAGTCAAAGATCGGGAAATTTCAATCCTACCCTATTTCCCAGAGCATCAG
CATCAAATTTTCAACGTTCACTGAGAAGGGACAAGATAATAGCTCAACAC
CGAGGTATTCTTTGGCGTCCATTAGTCTTCGCAGGGAAGACGTTCCCCAT
AACCCAGTCTTATACGAGACatagattttaatattttctaaactttcttt
taaTCACCAGATATCAGAAATGGCGCCCGTTGCATCAGAAGAAACAAACA
ATGTTGAAAATCCAACAGAATCACCATCATCAACAGTTTCGACTACCGAT
CCTACCGATCCTACCGACAGCTCTTCGGGTGGCTCATCTTCGGGAGGATC
GGGATCATCAAACCCACCGAATCCTCCACCATTTGATTCTTCAACCTGTA
ATTGTGGAGTCATTGCTGAAGGTGCTCAACAAAGTCCTTACCTTGCAGTA
TCATGTGAAATTGGTGCTATTAATTGTTGTTCTTATTGTCAAGGTCAACC
GAAAGATGTAGAAGCAAATTACGAATGCGTTGCTATACATGCTTTTACGA
GATCATTTTTCGGCATTCCACACAGTCACGGATGTCGATATACTATTTCA
AGTGGGGCAAATGTCGCTAAGTGATTTAACATCCACAGATAATATTGCAG
GGTGGAATAAAACGCTTTGTCATCGTTGCTTGAGAGTATATCATATTTGA
GcttcaaatttcatttaaaaaacaagttgaaAAGGAAGCGAGAAGCTCTA
CTTTGACGTGTGCCAGCTGGTAATAGTGCCAACAGACTGTGAATCTTTGG
CATATTTTCAAGACATCAAGCCACgagaacaaaaaattattttctaaaag
GGAGTTTTTTATCGACGAcgactaaaattgaaaaattattttgtatcata
aaataaaagaagattttataaatatcataaatataaattaattaaattgt
tttgttactgttcatgtttttatttttagtttttctttttgtaaatgaTT
TTGAGAATTGTTATTTATTGTATATTATTGTATTTCGGTATATTAtatga
aattatttaaaagaattgACATATAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030736XLOC_030736Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048289-exon-scaffold_142-1491911889:402023..402252TCONS_00048289-exon-scaffold_142-1491911889:402023..402252Clytia hemisphaericaexon
TCONS_00048289-exon-scaffold_142-1510915933:402023..402252TCONS_00048289-exon-scaffold_142-1510915933:402023..402252Clytia hemisphaericaexon
TCONS_00048289-exon-scaffold_142-1575043694:402023..402252TCONS_00048289-exon-scaffold_142-1575043694:402023..402252Clytia hemisphaericaexon
TCONS_00048289-exon-scaffold_142-1491911889:412741..412797TCONS_00048289-exon-scaffold_142-1491911889:412741..412797Clytia hemisphaericaexon
TCONS_00048289-exon-scaffold_142-1510915933:412741..412797TCONS_00048289-exon-scaffold_142-1510915933:412741..412797Clytia hemisphaericaexon
TCONS_00048289-exon-scaffold_142-1575043694:412741..412797TCONS_00048289-exon-scaffold_142-1575043694:412741..412797Clytia hemisphaericaexon
TCONS_00048289-exon-scaffold_142-1491911889:413383..414251TCONS_00048289-exon-scaffold_142-1491911889:413383..414251Clytia hemisphaericaexon
TCONS_00048289-exon-scaffold_142-1510915933:413383..414251TCONS_00048289-exon-scaffold_142-1510915933:413383..414251Clytia hemisphaericaexon
TCONS_00048289-exon-scaffold_142-1575043694:413383..414251TCONS_00048289-exon-scaffold_142-1575043694:413383..414251Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:402023..414251 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.0829985	0	0	0	0.180366	0	0.370315	0	0.35442	3.02263	2.82232	3.42912	1.77161	1.16203	2.25008	2.07425	5.56872	0	0	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048289 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top