TCONS_00048219 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048219
Unique NameTCONS_00048219
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2234

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048219 ID=TCONS_00048219|Name=TCONS_00048219|organism=Clytia hemisphaerica|type=transcript|length=2234bp
caaaattccgtaatgtaaaccttccagatgttgaaaattttcccgacctt
cagagctttagcgtgtcggatgaaaatttcaccatctgggtgccagataa
gggTGATCATGATCGAACAATTCCAATATGCAAGCCGACGATATTAGGAC
ATTGCCAATTTTGTCATTTACCATAAATAATAACACATTAAGGTTTTCCT
TAACATTTTGAGTATGGCACTCAAGGTACGCGATTGACCGTAAGGTAGTT
TTAACCGGTAGggaatttttttctcgatgctcgtcgtttgtttttttttt
ttgtttttttgtgattACGCAAGCGCGGCCAGTTAAGTGAAAACCAGGTC
CTCGGTTGGACTTCCAGGCTATCGTTCGATTTAAAAACATTGCTGCATCA
GCGTGATTTTACATCTGCTGCCCACTCGCTTGCGCTTGCTGCTGATAGTC
ACGTCCTGTACTTTCGCTGTCTCAGTTCAACCTTCTACTTTGAAGAATCA
ACCATCAAGATGCCATTCCTGAGTGATGAACAACAATCCAATTTGGCTAA
GGTAGCTAAATCCATTTGTGCACCAGGCAAAGGAATTTTAGCTGCTGATG
AGAGCACAGGAACAATTGGCAAAAGGTTTGCTGGGATAGGAGTTGAAAAT
ACTGAAGAAAACAGACGCTTGTACCGTCAGCTTTTATTCACAGGTGAAAA
AAGCTTAGGAAGCTGTTTAGGCGGTGTTATCTTGTATGAAGAAACTCTGT
ATCAAAAAGATGACAACGGCAAACCATTTGTTGAACTTATCAAAGAAATG
GGAGCCAATCCTGGTATCAAAGTAGACAAGGGAATTGTCCCTCTGCATGG
AACCAACAATGAAGGAACCACGCAAGGATTGGATGGACTTGCAGACAGGT
GTAAGAAATACCATGAAGCTGGTGCTACTTTCGCCAAATGGAGATGTGTT
ATCAAAATCAACACCCCAGTAGGTGTCCCTACCGATACTGCTATCCAGGA
GAATGTTCAAGTATTGGCCAGATACGCCAGCATTTGTCAAGCTAACGGAC
TAGTCCCCATTGTTGAACCAGAGATTTTGATTGATGGAGAACACGACCTT
GCAACCTCCCTTCGTGTTACTGAACGTGTCTTGGCTTGTGTTTACAAAAC
TTTGGTAGACCATCATGTTTATTTGGAAGGCACTCTGTTGAAACCAAACA
TGGTTACTCCAGGAAATTCGTGCTCAAAAAAAGCAACAGCTGAAGAGATT
GGTTTAGCTACTGTGACCGCCCTTCGAAGAACTGTTCCAGCCTGTATGCC
AGGTGTCACCTTCCTTTCTGGTGGACAGTCTGAATTAGAAGCTACTGCTA
ACTTGAACGCCATGAACAAAGTGGATTTACTCCGACCATGGTCACTTACT
TTCTCCTACGGACGTGCCCTTCAAGCAAGTGTATTGAAAGCATGGGCAGG
AAAACCTGAAAACGTTGCCGAGGCTCAAAAAGTCTTATTACATAGAGCTA
AAATGAACAGTCTGGCTTGCCGTGGATTGTACGAGGGTGAGGAAAAGAGC
GCGGCCGCCGACGAATCGCTCTTTGTCGCCAACCATCAATATTAAAAAAG
ACATTTGCCCTCCCTCTTGTGATAATTTAACTGAACTTATATCCTTAATA
ATAACAGTCTTTAAATCGAATTTTTGCGAAAATGTTAGTTAATGTATCTT
ATTTAAAGTATTATTATCTTATCTTGTCttattgaaatttcttttgtcaC
TTTATCTGTATAAAtagtagtatttttttgtattttcgtttttagttgtt
gttttttttttgcacgcGACATTAACTGTATTTTGCTAGAATTCTTATAT
AAAGAGTATGAAATGATAAAACTGAAATTCATCAGAAATAAAGACTCATT
TGTAAAAAATGGGGCAACAGGTGTTGAAAGTTATggatcatttttaaatt
ttcaaatttcaatgttCATAAAAAgagtttggattttttttatgaaattt
tgaaaatactaAACTAAGTTTTGAAACACCATTACACACTACTTTGAAGT
TTTACTatcatttgccaaattttcggATATATTGAATTTGTTGGTGTCAA
CGTTGATTGGGCCTGGGTATAACCTATATAAATTTTGAGAACTTTGTTTG
GTATTTCTGGTCTTTGAATTATTGATTATCACACGTGTAACATTGCCATG
GCAACTATGTTTAAGAAAAATCACACCTCCTGTC
Run BLAST on NCBI

transcript from alignment at scaffold_141:514380..522384-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048219 ID=TCONS_00048219|Name=TCONS_00048219|organism=Clytia hemisphaerica|type=transcript|length=8005bp|location=Sequence derived from alignment at scaffold_141:514380..522384- (Clytia hemisphaerica)
CAAAATTCCGTAATGTAAACCTTCCAGATGTTGAAAATTTTCCCGACCTT
CAGAGCTTTAGCGTGTCGGATGAAAATTTCACCATCTGGGTGCCAGATAA
GGGTGATCATGATCGAACAATTCCAATATGCAAGCCGACGATATTAGGAC
ATTGCCAATTTTGTCATTTACCATAAATAATAACACATTAAGGTTTTCCT
TAACATTTTGAGTATGGCACTCAAGGTACGCGATTGACCGTAAGGTAGTT
TTAACCGGTAGGGAATTTTTTTCTCGATGCTCGTCGTTTGTTTTTTTTTT
TTGTTTTTTTGTGATTACGCAAGCGCGGCCAGTTAAGTGAAAACCAGGTC
CTCGGTTGGACTTCCAGGCTATCGTTCGATTTAAAAACATTGCTGCATCA
GCGTGATTTTACATCTGCTGCCCACTCGCTTGCGCTTGCTGCTGATAGTC
ACGTCCTGTACTTTCGCTGTCTCAGTTCAACCTTCTACTTTGAAGAATCA
ACCATCAAGATGCCATTCCTGAGTGATGAACAACAATCCAATTTGGCTAA
GGTAGCTAAATCCATTTGTGCACCAGGCAAAGGAATTTTAGCTGCTGATG
AGAGCACAGGAACAATTGGCAAAAGGTTTGCTGGGATAGGAGTTGAAAAT
ACTGAAGAAAACAGACGCTTGTACCGTCAGCTTTTATTCACAGGTGAAAA
AAGCTTAGGAAGCTGTTTAGGCGGTGTTATCTTGTATGAAGAAACTCTGT
ATCAAAAAGATGACAACGGCAAACCATTTGTTGAACTTATCAAAGAAATG
GGAGCCAATCCTGGTATCAAAGTAGACAAGGGAATTGTCCCTCTGCATGG
TATGCTCTCTTTTTTTAAATATTTGGCAAAAGTCATGACAAAACAAGGGC
ACTAGGAGATTGCATAGGGATAGTATCTTCTTTTAAGGTATCCGACGTGA
TGACAGGGTTGGAAATTTACAGCTACTCAGACCTTTGTTTTGCTGCAATC
TATTAAGAAGGTATATAAGCTTAAAAAGGAAGGAAAGCATAAAAAGTCTA
CAAGGAAAATATTGTTTTTTACTTACATGGGAACTGCTTGCTATCTACCG
TAAGTTGGTCTAATATCGACACCCCTCGTCTAATTCCGACACCCTTCTTT
AGAGAAAGGAATAATATGAAAGCTTGAATCACTGATTGAAAAAGAATTAT
TCCTCTCTGACTAATAAGCAAAGAAAAACAGTTTCAACCTTTCTATAAAT
TTCAGCTGATAAAAAGGGTGTTGGAATTGGAGGAGGGGTGTCGACATTAG
ACCAAGTTACAGTATCTATCTATTTGGTTGAGTCGCAGGAGGCTTTTAAG
GCCCATTCTTGCAACTATAGATGCTTTCGATTAGCGCCCTGTCAGCACCT
TGAACTGACTACCCAATTCCCCTCACATAGCATGGGTTGACCTGGGCAAA
GGTTCATTCACTTGCCAAGTGAACCGCTATGAGTGGGAATCGAACCTCTG
TTGCCTGTGTAGCAACCAAGGTCAATGACGACTATACCACAACGCCTCTA
TACCACAGGGCATCCACGACTATACCACAACGCCTCTATACCACAACGCC
TCTCTATATTTAAAGGGGAACTCAATAAATTTTTTATTTTTATTATTTTC
CTGATGTTTGGTAATATTAAGTATAAAAATGAGAAAGAAAGTATATAGGT
TCGATCTCTCAAATAAAAATCATGAAAAATCTCTCTTAACTTCAGTTAAA
AATATGTTCAAAAAGTCACCCCCTTTCTTTTTAAAAAAGATCGACTTCTC
TTTGGATTATGACGTCAAAGTATTCAGAAAACAGAACAAATTCAGTTATG
ACTACAGTATGCTTTCAGAGTTCTGTTTTAAATAAGAAATAAATACATAG
AAAAGTATTCCTGGTAAATTGTGGGTGATTTAGCTNTACTTGGAATACTT
GGAAATGCTTTCGATGGTCTTCCATCTAGGTGAACAATCCAATGTCCGCC
TGCCGATTATTGATTTGATGTTTGATTGAGTTGGATGTAGCATTTGTTGT
TGCGCCTAGAACAGAAGGTTCATCTGGAACAGAAACAAGGAACTTGTCTA
GCTTCTTTTTTAATTCTAGCACAGGGCATCCACTTAAATTCCTCAATTCT
TTAGGGAGGGAGTTGATAAGAAATTATGTCGGATTGACTGTAGGGCAACT
AATGTTCCTGTTATTCGGGCTTTCACAAAGCACAATCTTCCAAGTCTGGG
TTGGAAAACAGGTTGTAACCCGTCTGACTGGTTTATATTAGGCACAAGGT
TTTCAAGGATCTTCCACGTGTAGATGATCATGTATCTTTCACGTCTTCTT
TCTAGCGAATAAAGCTTGAATGCCTTCAATCTTGACCAGCATGATTTTTC
GGGGTGAATGATTTTTCGAATGAAGCTCCACTGGACCATTTCAAGAACAA
TGTTGCTGTGGAGCCATAGGTTGGTACGTTGTCACAGGGGATTGTTGATT
TGTTGATATCTGGCTCATTATGTAAGAGAACTTTGTGTCCATTACCTTCA
TTATCTCTTCTTTCAGAAGGTGGACTGATTCTAAAAAAGTTGGGTCCTTG
TTGGTCGCCTCAGGTTTGGGCTTCTCTTTTTTTGTCCATCTTAAATGCAT
GAGATTACAGTCTTTTTGGTAGCAGCAGCCTTTGGTAATTGAAGTTGAGC
ACATTTTAGGATGGAAGTCTTGACATTGTTTTCCTTTATTGCATCCTCTG
GGGGCTCGAGTTCCATGTGAAAGTAGCTTCTTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGTTGTCATTG
CCTTTGGGTGAATTTGGTGCAGTTTGTTCAATTTGATCGTCCTTGGGATG
GTCTGGTGCAGATGTCTTTTTGCGGGTTTCTTTGGGAAAGTCTAGTGCAG
GTATTTCTGTTAAGTCCTCGTCAAGGAGATTGATTTGATCAATATTCTCA
AGATCTGGATAGATTCTTTCTATTTGTCGATTTGGAACATCTGGTATTGG
TTGGTAGGGTAAGTTGGTGAATTGGTTTTGTCTTTGGGTTTCTGGAGGGC
TGCTTAATTCTGGCTGGGTAGATGGTGTAGAATCTTTATTCTTTATGAAT
CTTTTCTTTTTTCCACAATCATCTTGTGGGATTTTGGTTAGTTCACAGGG
TTGACAGACGTAGTAAAGTCCCGGGAGATTGAAAGGGTTGAAAGTCTTTT
TGAAGGAAGCAGTGTCAAATTCCATTGTTGTTGCACCAAGGAGTTGAAGG
TAGCATTTACGATGGACTTCTTGGCCACAAAAGACACATGCTAACAATGG
AGTGTCTTCAATTTTGAAGCAATATGTCTCATTACATAATGAGTATTCGT
CAGGAAGGAGATTTTGTAGTCTGCAAATTAGTGCATGGACATTTGCTGAT
TTTACATATTGCTCTTGATTTTCGACTTTCAGGTAGGCTAAAGTTGATTC
CAGAACAGGTTTGTTGGATTTGCCAATGTCTTTAGTAAGTTGATCGAGGG
ATTTGCCATATTCATAACATCTAAGGCAAGACTTAACTTCATCATTTGGA
GCAGAAATGCAAAATTCAGCAATCAGATTCTCTGCAGCTTCAACCTTGTT
TTGCCGTTCAACATTGTCAGACATAGTTACAAATAGGGTTGACGTATGGA
GGTGAAAGTGTAAGGATTGTTACCTGCTCAGCTGCACATGGAATTCCAAA
CTCTGTCATGTGCAGCTGATCCTACAGTTTAAGAGTTGACAATCCTTTTG
AAGCTTGTGGGAATAACGTGTGCGGGGCAGGGATTCTTGTGCAATCAGAA
GAAAGAAGAAAAATTAGTCACTTAGCTGAATGGCTGCACTGTGGGGTGAG
TGCAGCCTGATGTTGAAGCGTCAGAGTTTATTGTTCGATGAGGTGGTCTT
CAGACTTTACATACAAACAAGCCAAGGCAAGGTTGATTGTTGTTAATATC
CACCAGTTGTAGCTCGCCAAACATTTGATTTTGATTTTTTCTTCTTTAAT
TTTTCCTTTTAATTTTTATTTTTCACTGAAAAATACTGGCCTCTCCCACG
TGTTTCCACACAGGTTCAGCCTTATTCACTAATTCTTAATGGAGTGANGA
AAAATACTGGCCTCTCCCACGTGTTTCCACACAGGTTCAGCCTTATTCAC
TAATTTTTAATGGAGTGAATTTTTTTATCTGTTAAATAAGAAATAAATAC
ATAGAAAAGTATTCCTGGTAAATTGTGGGTGATTTAGCTGAATAACAATA
AAAAATCCAACAAGAAACAGAAAAAATTAGTCACAAACCCTCTACTGAAG
GGCCTGTCTTCACTGATTTTTAGCCTGAGAAGATAAGCATCTTCCTCTTT
CTGAATGCAGCTACGTCATAAAACAGCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTATTTGATAAACAATTT
CATTTTAGTAGAGGGGAGCCTCTTTTTAAAAGCTCATTAAACAAATTTTT
AGTGTGAAAGGAGAGTTGCAACCTTGAAATTTTGAAATTTATCGTTGAAA
CAAACCATTTCAGGATAGAAACAAAAAAATCCAAAATTTGTCGAGTTCCC
CTTTAAGTAAAGCTTTTGTTGTAACCGTTTATGAGATATTGTAAAATATT
GACCTCTGTAAGAAAGTCCATAGCTTGTGAAGGTAAGGTTTGACAGGCTG
TTAGTCACACTAGGAAATCAAGCTTTCAGAAAAAACAACATCAGTCATCT
ACAGGATGTATTTGCAACAACAAGGATGAGAGTTACCTGAATCAAGTTCG
CAAGACAATTAATTAAAAATTGAAAGTTTGAAACAAAATAAAACGTGCAG
TAGCCAAAATCAACCAACCAAAATTTGTCATTCAATTCCCTAGACAGCGC
TTCGATTTTTAAGGCCTTGTTTATATGCTAAAGTAAAAACAATTCTGCAC
ATGTAAATGGGTCAGTGTTTGGGTTCCCGCAGATCTTTTTCTTGGGAAGT
TGATCTTCAAATGAGTTCTCAAGGTTGGCTTGGCTCAAATTTTTTCATCT
ATGGCTCAAATTTTAGGCAATTTCTCATACATAGTTTTTGAGAATGTTAA
TTTCATTAAAAAGCACCGGGTTATTTTTAATGAATCCCTTTTATGCTTGA
GAGTCAGGTAAACAATATAGGGTTTTCCCAGCATTAATCTTTGATACATA
TTTCGGCGGGACGCTAGTGTGACTAACTGACAGAGATCAATAATTTATGG
AATTGCCTGAACAAGCCAGTTAGTACAGTATATTGATTGTTACCCATGTT
TATCTTTTTTGTGTATAATGAACCCCTTCAATGTTTGCAGCCTACACAGT
ATTCTCATGAATGTACATAAAAATACTTCTTTGGATGTATAAATGAGTAG
CTCAAAATGAGTGCTATTGGATTACATTGATGTTAAACCTAGTTACTTGT
CTTATATCTTGAAAACAAAATAAGTCCATGTTTACGTTGTTTGGAAGTCA
GATTTGATTGTTCTTTGTTTGTTTGAAGAAAGATACATGTTGTGCTGGTA
ATTTTTTCTTGAAGGTGATGTAAATGTTCTCAATTTGAAAGCGTGCAAGA
TTTATTTGAAATTAGAACAATATACTCTGAACATTCATTAAAAAAGATTT
GGTTTCTTGTTTTTTTATCCGTGTTATGTTATCTTTACAGCCAGTCAACA
GACGATGATTTTAGTTTGACCATTCTCGAATGGCTTTCAGTACTGATTAT
TATCTTTATTATACTCAGGAACCAACAATGAAGGAACCACGCAAGGATTG
GATGGACTTGCAGACAGGTGTAAGAAATACCATGAAGCTGGTGCTACTTT
CGCCAAATGGAGATGTGTTATCAAAATCAACACCCCAGTAGGTGTCCCTA
CCGATACTGCTATCCAGGAGAATGTTCAAGTATTGGCCAGATACGCCAGC
ATTTGTCAAGCTAACGGACTAGTCCCCATTGTTGAACCAGAGATTTTGAT
TGATGGAGAACACGACCTTGCAACCTCCCTTCGTGTTACTGAACGTGTCT
TGGCTTGTGTTTACAAAACTTTGGTAGACCATCATGTTTATTTGGAAGGC
ACTCTGTTGAAACCAAACATGGTTACTCCAGGTCAGTATCAAAACAAAAT
TTTTATATTGAAGCTCTTTTCTTCTGTGGCTTGGCAAGGAACAGTTTAGT
TATTTTATCTACTCAATGGGGACAATTTTGTTTTCTGTTCTTTTTTCTAA
AACGTTTGAGTGTCGATTTTGTTTTCTTAGTTAGTTTCAAAGGNGACCAT
CATGTTTATTTGGAAGGCACTCTGTTGAAACCAAACATGGTTACTCCAGG
TCAGTATCAAAACAAAATTTTTATATTGAAGCTCTTTTCTTCTGTGGCTT
GGCAAGGAACAATTTTTTAAAGTTTTAAAGTTTTTAAAAGTTTCAACAAT
TTGTTTAGGAAATTCGTGCTCAAAAAAAGCAACAGCTGAAGAGATTGGTT
TAGCTACTGTGACCGCCCTTCGAAGAACTGTTCCAGCCTGTATGCCAGGT
GTCACCTTCCTTTCTGGTGGACAGTCTGAATTAGAAGCTACTGCTAACTT
GAACGCCATGAACAAAGTGGATTGTAAGTAGATTTTTTATTATAAATTGT
TTGTAGATGCTTTGAATTCCATGAGTTGTGTTTAAAATCTATGACATACA
GTACGTACCATTTCTGGGTATAAGGTATCTACTTTATTAATCAGTATTCC
AGAGGGCAAGATAAGTTCTTCGTTTTTCTGTACGTTTATCTACAAAATCT
CAGCAAACTTTTTGAATATTTTAAATCAGTACAGTCCATGAAAAACTTTA
ATTATTTCCTTCTTTTTTCGCAGTACTCCGACCATGGTCACTTACTTTCT
CCTACGGACGTGCCCTTCAAGCAAGTGTATTGAAAGCATGGGCAGGAAAA
CCTGAAAACGTTGCCGAGGCTCAAAAAGTCTTATTACATAGAGCTAAAAT
GAACAGTCTGGCTTGCCGTGGATTGTACGAGGGTGAGGAAAAGAGCGCGG
CCGCCGACGAATCGCTCTTTGTCGCCAACCATCAATATTAAAAAAGACAT
TTGCCCTCCCTCTTGTGATAATTTAACTGAACTTATATCCTTAATAATAA
CAGTCTTTAAATCGAATTTTTGCGAAAATGTTAGTTAATGTATCTTATTT
AAAGTATTATTATCTTATCTTGTCTTATTGAAATTTCTTTTGTCACTTTA
TCTGTATAAATAGTAGTATTTTTTTGTATTTTCGTTTTTAGTTGTTGTTT
TTTTTTTGCACGCGACATTAACTGTATTTTGCTAGAATTCTTATATAAAG
AGTATGAAATGATAAAACTGAAATTCATCAGAAATAAAGACTCATTTGTA
AAAAATGGGGCAACAGGTGTTGAAAGTTATGGATCATTTTTAAATTTTCA
AATTTCAATGTTCATAAAAAGAGTTTGGATTTTTTTTATGAAATTTTGAA
AATACTAAACTAAGTTTTGAAACACCATTACACACTACTTTGAAGTTTTA
CTATCATTTGCCAAATTTTCGGATATATTGAATTTGTTGGTGTCAACGTT
GATTGGGCCTGGGTATAACCTATATAAATTTTGAGAACTTTGTTTGGTAT
TTCTGGTCTTTGAATTATTGATTATCACACGTGTAACATNCTGTATCCTA
TATAAATTTTGAGAACTTTGTTTAGTATTTCTGGTCTTTGAATTATTTAT
CACACGTGTAACATTGCCATGGCAACTATGTTTAAGAAAAATCACACCTC
CTGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030684XLOC_030684Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048219-exon-scaffold_141-1575043694:521536..522384TCONS_00048219-exon-scaffold_141-1575043694:521536..522384Clytia hemisphaericaexon
TCONS_00048219-exon-scaffold_141-1575043694:516087..516416TCONS_00048219-exon-scaffold_141-1575043694:516087..516416Clytia hemisphaericaexon
TCONS_00048219-exon-scaffold_141-1575043694:515836..515868TCONS_00048219-exon-scaffold_141-1575043694:515836..515868Clytia hemisphaericaexon
TCONS_00048219-exon-scaffold_141-1575043694:515562..515726TCONS_00048219-exon-scaffold_141-1575043694:515562..515726Clytia hemisphaericaexon
TCONS_00048219-exon-scaffold_141-1575043694:514498..515311TCONS_00048219-exon-scaffold_141-1575043694:514498..515311Clytia hemisphaericaexon
TCONS_00048219-exon-scaffold_141-1575043694:514380..514422TCONS_00048219-exon-scaffold_141-1575043694:514380..514422Clytia hemisphaericaexon
TCONS_00048219-exon-scaffold_141-1510915933:521536..522384TCONS_00048219-exon-scaffold_141-1510915933:521536..522384Clytia hemisphaericaexon
TCONS_00048219-exon-scaffold_141-1510915933:516087..516416TCONS_00048219-exon-scaffold_141-1510915933:516087..516416Clytia hemisphaericaexon
TCONS_00048219-exon-scaffold_141-1510915933:515836..515868TCONS_00048219-exon-scaffold_141-1510915933:515836..515868Clytia hemisphaericaexon
TCONS_00048219-exon-scaffold_141-1510915933:515562..515726TCONS_00048219-exon-scaffold_141-1510915933:515562..515726Clytia hemisphaericaexon
TCONS_00048219-exon-scaffold_141-1510915933:514498..515311TCONS_00048219-exon-scaffold_141-1510915933:514498..515311Clytia hemisphaericaexon
TCONS_00048219-exon-scaffold_141-1510915933:514380..514422TCONS_00048219-exon-scaffold_141-1510915933:514380..514422Clytia hemisphaericaexon
TCONS_00048219-exon-scaffold_141-1491911889:521536..522384TCONS_00048219-exon-scaffold_141-1491911889:521536..522384Clytia hemisphaericaexon
TCONS_00048219-exon-scaffold_141-1491911889:516087..516416TCONS_00048219-exon-scaffold_141-1491911889:516087..516416Clytia hemisphaericaexon
TCONS_00048219-exon-scaffold_141-1491911889:515836..515868TCONS_00048219-exon-scaffold_141-1491911889:515836..515868Clytia hemisphaericaexon
TCONS_00048219-exon-scaffold_141-1491911889:515562..515726TCONS_00048219-exon-scaffold_141-1491911889:515562..515726Clytia hemisphaericaexon
TCONS_00048219-exon-scaffold_141-1491911889:514498..515311TCONS_00048219-exon-scaffold_141-1491911889:514498..515311Clytia hemisphaericaexon
TCONS_00048219-exon-scaffold_141-1491911889:514380..514422TCONS_00048219-exon-scaffold_141-1491911889:514380..514422Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_141supercontigscaffold_141:514380..522384 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.305377	0.232528	0.354909	0.439163	1.24803	0.71772	0.869253	0.499217	0.796469	0.514121	0.257659	0.566902	0.50343	0.239732	0.410148	0.294271	0.286214	0.342655	0.330009	0.236181	0.392375	0.559208	0.147199	0.292593	1.12508	1.71688	0.462609	0.222308	0.404835	0.0473752
Blast
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BLAST of TCONS_00048219 vs. Swiss-Prot (Human)
Match: ALDOA (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 477.248 bits (1227), Expect = 4.083e-162
Identity = 234/363 (64.46%), Postives = 277/363 (76.31%), Query Frame = 3 
Query:  507 KMPFLSDEQQSNLAKVAKSICAPGKGILAADESTGTIGKRFAGIGVENTEENRRLYRQLLFTGEKSLGSCLGGVILYEETLYQKDDNGKPFVELIKEMGANPGIKVDKGIVPLHGTNNEGTTQGLDGLADRCKKYHEAGATFAKWRCVIKINTPVGVPTDTAIQENVQVLARYASICQANGLVPIVEPEILIDGEHDLATSLRVTERVLACVYKTLVDHHVYLEGTLLKPNMVTPGNSCSKKATAEEIGLATVTALRRTVPACMPGVTFLSGGQSELEATANLNAMNKVDLLRPWSLTFSYGRALQASVLKAWAGKPENVAEAQKVLLHRAKMNSLACRGLYEGE-EKSAAADESLFVANHQY 1592
            + P L+ EQ+  L+ +A  I APGKGILAADESTG+I KR   IG ENTEENRR YRQLL T +  +  C+GGVIL+ ETLYQK D+G+PF ++IK  G   GIKVDKG+VPL GTN E TTQGLDGL++RC +Y + GA FAKWRCV+KI      P+  AI EN  VLARYASICQ NG+VPIVEPEIL DG+HDL     VTE+VLA VYK L DHH+YLEGTLLKPNMVTPG++C++K + EEI +ATVTALRRTVP  + G+TFLSGGQSE EA+ NLNA+NK  LL+PW+LTFSYGRALQAS LKAW GK EN+  AQ+  + RA  NSLAC+G Y    +  AAA ESLFV+NH Y
Sbjct:    4 QYPALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGE--HTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364
The following BLAST results are available for this feature:
BLAST of TCONS_00048219 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ALDOA4.083e-16264.46Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
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