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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048176 ID=TCONS_00048176|Name=TCONS_00048176|organism=Clytia hemisphaerica|type=transcript|length=910bp
CTCAggttacaaaaaataaatcaaaagattataaaaataattttctatag
AAAATAAGAGAATATGCCAGGAAGAATCGAAGGCAAATGTTTGGTTTGCG
ATGAAACAGATGCAAAGTATAGATGCCCTAAATGTAAGATCGTATAttgT
TCGCTGGTATGTTTCAAGCCACACAAAGAGAGTTGTGCCAATACTGTTCA
ACAACCCATGACAAAGTTAGATGACAGAAATACAAAACCATCAAATGAAG
CTACCATAAATACACCATTCGTGGGAGACGGAGGGGAAAGGATGAGCAAC
AATCTAACATCACCAGAGTCATCAGTACCACAACATCTGTTATTGACTGA
GGAAAACGATCGCGTCCCAGAAGAACTCCTTCGGAAACTTGgtGATTCAA
ACCATTTGAAAGGTTTACTGAACAATAAACATCTTCGTGATATGTTGCAT
GAAATCAACACATCACAAAACCAATCCAAGACCATGGAAAAGGTGATGCA
GATCCCAATTTTCACCGAATTTGTTGACGAATGTTTGAACGTTATCGAAC
CTGATGAGGAACAACCACAACAAATCATTGATCTATCTCTCACTTCAAGT
TGAAAAAATGGTACACATACTTCAAGATGCctttgaaaggtatttttatC
TGGCTTTTGATTCACCTGGTAGTCacctagctggcacacaacgttgtttt
aacgttcaagtaacgttatttggacgttatgaatgtcacatggacgttgt
tttgatgttgtgtGCCGTTTGGTCAAAATTATACGTTGTGGAACAACACT
CGTGTTCAATGATAAATAGACGAGCAACGAAAAGCAAACGAGATTTCAAT
AATGGTTtgctttaagggctctggacatacccaatttttcgattttacac
taactgaaat Run BLAST on NCBI transcript from alignment at scaffold_141:375469..388669+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048176 ID=TCONS_00048176|Name=TCONS_00048176|organism=Clytia hemisphaerica|type=transcript|length=13201bp|location=Sequence derived from alignment at scaffold_141:375469..388669+ (Clytia hemisphaerica)
CTCAggttacaaaaaataaatcaaaagattataaaaataattttctatag
AAAATAAGAGAATATGCCAGGAAGAATCGAAGGCAAATGTTTGGTTTGCG
ATGAAACAGATGCAAAGTATAGATGCCCTAAATGTAAGATCGTATAGTAA
GTATTTATCACAATTTCACTTTTCAATATTATAGGCATCTTATCCAGCTG
ATTTTGATCTGTAGATGAAATGCAGAAAAGGTTATCGTTTCCAATGTATT
AAAGATTATTAATTCCAATGTTTATTGGCCCTACGTCAAGGTAGAGCGTC
TAACTACGTTACACGTTACGCAAGGGTGCGGGTTCAATTCCCGGCCGGGT
TATTCTTAAGATTTACACAATGGTGCTTGATTCTTCTTAGCTTGATGCTC
AGCAGTTAAGAGAAAGATTAACACTAAGTGGTGAAATACAGggagagtgg
cgccctcccttACCAGTGGGTACACAtacagctagagaaaagggagcctt
cgggtcggtCGCTAAGTGAATTACTAAATGTATTTTTGTATTGACTCATA
TTTAGTTCTCATTCTTAAAACTAACTCTATTAAGTAGATTTAGAAGAGAA
AACATCAACACCCTGATCTTATACATCTCTTCTTCATTTTAACTTAATCC
TCCTCTCTTGCAGCCCTTCTATTTCTCAGGTCACGAATACTAAAACggca
ttttgattttgttttttcatttttcagttgTTCGCTGGTATGTTTCAAGC
CACACAAAGGTAACTTGATTTTACTGTTTTTTTGTTAACTCAGATGTCAT
TATTACTTAGGGTTATTAATGATTTTGAGACACAACCTTCTTACTTGATA
TCCCCCATAAccttgtttgaaaaatattgatccCAAGGTTTTCCATAGAT
TTTATTTAATTGTTGATTGTTTTGTTtgtatttatgatatgcaccattgc
aatgtcttccacggacacgatagctgattggttgaaagtgacgtattaac
TGACTTTACGTCACTCACAACCAATtaattgggtccgtgatgtaatgtca
gaagacattgcaatgttgCATACCATGAATACCGCTTTTTTGTTTGCGTA
CAACACAAAATTCAAAGGAAAAGTACAAATGTATAAACTAACACAAATTA
TTCTCAATTCCGACCAGAGGAGAAGGCTCCATCCTGACCCCCTCCTCCCT
TGAAAGACTCTTTATTTGTGGTCtaccttttatttattttttttaccact
CTTAAGCTGCGAGGgccaatgttttagttcgaattgcagaaagattcgaa
ttatagagattGGCGTTAGAGTGAGAGTTGAGTTATTAACATTAGGATAG
CTAGTGAATGAGATATCAAGGCGCACGAATCGGAAATTTATTCCTGACTT
CAACATACCATGTTAATGTGTTTATACTTGTAGTACGGTCTCTTTTCGAC
TGGTCTTTTCTGTattaagaaaacatttttcacgACTCTTATATCAAAAT
AATCTCCTTTTCTATAAATCAATGCTCCATCAACGATAAATGGTCTACAT
CAAAATGACGCAGTTGACCCTCGCTAATTCGAATTCGAACGAAAAGTCTA
ATTTATTTGAATCAGGTTCAGAATAGTAGAGAGTATTTAACGAAAGTTTA
GCCTCGACGGGAACTAAAATTTAATTAGAATGATAGAAGTGCAAGAGTAc
tttattcttttttatcaaCCAACGCAGAGAGTTGTGCCAATACTGTTCAA
CAACCCATGACAAAGTTAGATGACagaaactaaaatttaattAGAATGAT
AGAAGTGCTAGAGTACTTTATTCTTCTTTATCAACCAACGCAGAGAGTTG
TGCCAATACTGTTCAACAACCCATGGCAAAGTTAGATGACagaaactaaa
atttaattAGAATGATAGAAATGCGAGAGTACTTTATTCTTCTTTATCAA
CCAACGCAGAGAGTTGTACCAATACTGTTCAACAACCCATGGCAAAGTTA
GATGACGGGAactaaaatttaatttgaatgaTAGAAGTGCAAGAGTActt
tattcttttttatcaaCCAACGCAGAGAGTTGTGCCAATACTGTTCAACA
ACCCATGGCAAAGTTAGATGACagaaactaaaatttaattAGAATGATAG
AAATGCGAGAGTACTTTATTCTTCTTTATCAACCAACCCAGAGAGTTGTA
CCAATACTGTTCAACAACCCATGACAAAGTTAGATGACagaaactaaaat
ttaattAGAATGATAGAAGTGCTAGAGTACTTTATTCTTCTTTATCAACC
AACGCAGAGAGTTGTGCCAATACTGTTCAACAACCCATGGCAAAGTTAGA
TGACagaaactaaaatttaattAGAATGATAGAAATGCGAGAGTGCTTTA
TTCTTCTTTATCAACCAACGCAGAGAGTTGTGCCAATACTGTTCAACAAC
CCACGACAAAGTTAGATGGCGGGAACTAAAATTTAATTAGAATGATAGAA
GTGCTAGAGTACTTTATTCTTCTTTATCAACCAACGCAGAGAGTTGTGCC
AATACTGTTCAACAACCCTTGGCAAAGTTAGATGACagaaactaaaattt
aattAGAATGATAGAAATGCGAGAGTGCTTTATTCTTCTTTATCAACCAA
CCCAGAGAGTTGTGCCAATACTGTTCAACAACCCATGACAAAGTTAGATA
ACagaaactaaaatttaattAGAATGATAGAAGTGCTAGAGTACTTTATT
CTTCTTTATCAACCAACGCAGAGAGTTGTGCCAATACTGTTCAACAACCC
ATGACAAAGTTAGATGACagaaactaaaatttaattAGAATGATAGAAGT
GCTAGAGTACTTTATTCTTCTTTATCAACCAACCCAGAGAGTTGTGCCAA
TACTGTTCAACAACCCATGACAAAGTTAGATGACAGAAATACAAAACCAT
CAAATGAAGCTACCATAAATACACCATTCGTGGGAGACGGAGGGGAAAGG
ATGAGCAACAATCTAACATCACCAGAGTCATCAGTACCACAACATCTGTT
ATTGACTGAGGAAAACGATCGCGTCCCAGAAGAACTCCTTCGGAAACTTG
GTAAGAATGACTGGAATATCTCCTTGATTCTCTCCAAATATCTCCTTAAC
TCATTAACAAGTTTTTTGACCCCTTTCAGGTAACAAACCCTTATAGACCA
GTAATTCAGGTCTCAGAAATTTCTGTAACTCAATAAAACCTTTCCACTGT
AATACATATTGGCGTTCTGATCTTATAAACATATCGTTGtggaacttttt
attttttttattttttttatgataaaaGCATTTTCGTTGAGTTTCATTAA
TGCGAATTACAATAAGGGCAATAAATTAGATTGAATAagtttgattgaat
gaataagtaattaaaaaacaaaaactgccAGTGACACACTAGGACTGTTG
CGAGTAAAAGTAGGCAAATGGCAACAAACAAATGGCCAAAAATATAAGCG
AAACTGTTGTAGTTCTTGTAGTTCCCTTCATTTTCACTTTGGACATTTAC
ATATTTCTAATTTTCAGCTCAGGCATTTTCTCCTACTTGACCTAATTTCT
TTTGCTCTACACTAGCCTGTATGCGCATTTGAACGTCCCATAATCAGTTT
AGTTAGGCCAACTTCCCATATCTTAGTTTTCCGTACCAGAAATATCTGTC
CAAGCCCCCGCCTCAATAtacgtcagcaaaactttttcttgttacttttt
ttttgagttCGGACACGAGAGATTATTACGTTTAGCTTTTGCTACGTAAA
AATAATCTTCAgttttttaaaatctattttgaGCATTCTTTTACGATGCC
CACGTTAGATGTTTCAAAACTTCTATTTTTGGAGGTCCTTGCAATTTGGA
GATGtgagaaaaatatataaaatagaaaatcttaaacatgaaactgccag
tattgaaacaataattttcattGCTTCAACTACGATAAAATAGGAAGTCC
ATAATTCGAACCTTTCTTACTCGTATGATAATTAAATCGGACCcccggtg
ggggggggggttgcaAGGAAAGCGGCCCTTAAGTTTGAGTCCTTTGGGAT
TAGCAGTATTTTTGTAAGGTCAATAAAGCATTTTGTAAGTCAAAATCTCG
AAATGGCATCTATTTTTGAAGTAATTTACATGTAGTTGCGTGGTACGAAA
GTAGTCACAGGTTGACATCTGTTCCGTGTAAGTTTTTCCGTTTCCAGTTT
GCTGACGTGTagggatgaaaaaaaaaaacggaaaaaagaaatgattttca
ccgaagaaaaaaaaatctattgcAAGTTACATGCCCACGATCTGCACATA
AGGCTTGAAGGAAAAGTACAACGACGAGGGGCTACCTACTACAAACACCA
ACTGAGAGTCTATAGCTTGTtttgttctttgttttcaatgatACCTACCA
TCttgtttttgtaaaatcatTCCTTCTTTTATACTGTATTTTTCGATTGA
TAACTATAACTTATATTAGGAGTGGGCTATACagggtcattttcattttt
ttcgtcTAATCAtgtcaaactaaattttctttagCTCCGTATGGCATATC
TAGGCAggatcaaaaagaatttttgagatattttaaatataaaaaatgtg
ggAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAATCCCCAATTTGA
CCTGGAAACcttaaaaatcattcaattttGCTGCAATTTGGTACAAGTCC
TCCTtgaataacaataataacattttgtcagtactatttaaaaattttca
tcatcGGACGTTTTAGGGCGTGGCCAAAccccaaaaagggcaaaaaggaT
TGGGTAACTCTAGAAAACTTTGGAATGATATTTTTGCCCTAAAGTTTTGC
ATGCCTACCCTCAGTTATCTATCTTGACGAATCCTGAGAATATTTCCCAA
AGTTAATTTGTTATTTCGTAAATAATTGCTTTGGTGTCCgtaaaaaaagg
ggaaatataGACGGGCTAGGGCTCATTCATAAATCGTGTAATTCAATTGA
AATTCCCTCTAGAAATTGGTATTCTTGATCCAAGAACANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTGCTAAATTAAGGAAAGTGTTTTTA
TCACATAGAGCAAATTGTCGGCAGTTCTACGAGAATTTACATTATTTCAG
ATATAAAAGAAGTGCTTACAATTCACAAACATTaattttgatggattttc
tGTTGTTCAAGACCATAGAAATAAAAGGTTGTCAAGTTTTCATATATTTA
GGACGAGAAGTCACTCCCTCTAggtaggaaaaataaaatttttaagattt
cacaATTTACACTGACAAATCTTCACCTGAAGAGGTAATGTGCCAAATTA
AGTAGGAAAGAATGTTTTCTCGCCTTTATAGTCAAGCCTTCCTCTTTTTA
CCTGCGTAAAGCCTTTGGGCTACGcccaaaatgtacaaaattatAATTCT
CGAATAAATGTTTTGTGTCCCTGAGAAGTGAATGTGCCAAATTTGAGCGG
AATTCAATTTCTGTGTGTCTCATTTCCAACATAATTTGGGTAGTTGGGTA
GATGGAAAAAGATTGATTTGAGGGCACAAACCTTAGTCTACAAAAAGACT
TcccacattttttttcttcatttttgttcaaaaattctaTTTGATCCTGT
CTACACTTATAATTTagacctcaaaaaaattttttttgaaaaatcacccT
GTATAGCCCACTCCTACTTATATTACAAGCATAAAACGGTGAACATAGTT
TACAAAATCAGGATACATTAATATTCCAAACTAATCGGCATAATCtaaga
aaaaattcgaaatcatggagaaatgaagatgaaaagtgaagatgaagaaa
atcaaaactttaatgGATTGTTAACAATTAGTAGGGGGgaatttgttcga
tttttttagATCAAAGCACTCAtatatacatttttttgaaagctaagggg
taggggaatcaaaataacatgGCTGCCAATTTtctttcggacactttggt
gcgttcttcggacaaatatgacggtctcaggcaaaaatcatagggtgaaa
atttatggaaatttttggCTTGAGAAAGAGAGTTGTTGTatacctgttgt
atattttagGAAAGCTCTCTGAGCCTTAAAACTAGTGTTTTTAGCCAGAT
ATAGCTGCTTCGTCCACATTTTGCACTCAATATCTtcagtacagaaatca
cctataatCACCGAACATTCGAGTTATGAAGGTTCGAGTAGtagaacttt
tttataagagtttgTTAGGTAATTTTCACGATGTCAACGTATTCATTCGA
GTTAAGAGGACGTCGGAGTTAAGGAGACTCTATTGCAGATTTCTCTGACG
CCCTATTCTCAGTCGAAGTTTATTCTTTGAATATACTGTTTTCCTTGAAA
ATAACAAATCgctcattttattttcatctattattttccaaaaaatcgga
tgatttgacgataaaatgAATTTCAGGAAATGAGAATCTTTCGAAGATTT
ATCTCAAGACGCCTAAGCTCTGTAAACATTTCCTAAACTCTTTTTCGAAA
AAGGTCTGGCGTAGATTAAAACATTTGATAATTAACTAGTGTAGGTTACC
GCCCCATTTTGAAGATTAATAAAAACAGGCTGGATCAGGCTTCTGCTTAT
CCTCTAGCGAACAAATTTTCTTACAGGAAGTATATCTAAcaagaggtctg
cgattcagactaaggCCAAATGGAAATATTTCAGTTAGTCTGTGCCATAA
CAGAGGCCCCCAACGATTCGATCGTAATACTTCAGAAAGCCTGGAGTTAT
ATGTTGTGTAAGCCGAacttaaaatttcgaaatatgAAGAAATACCCAGA
ATTGCCATTATATTTTGACCAGTTTGTAGGCTGTTTTAAAACATCTATCA
TAAAATAACGTTATGTATCATTTGAAATCCATTCGAAATCAGGGAATTAA
AGTAAAAGTTTCGTTTTTaagtaagagtgatatcgtttgcttactcatca
cttTTAATTTACAAGGTTTTTCATATTGGactgacacggatgtggagcaa
gatgatcagaaagagggaaagaaaaacattttttgtttatatcagcaaaa
tataacaatagcaagacactgtcccgacatgaaatatgtgtctgatatga
aatggaaacacttatgtaaaaataaaacctttaaacggaaagtaaaatcc
ataaaaaatttgcgtaattatcaaaatttgatcAGGTCAAGTGTACCGCA
ATTTAGTTTGCTTTATCTGATTCCTAtctgattttcattttggatAGGAT
TAATAGGATTAATTCTTCATTTAATCTCAAGAGAGACGATTGAAAGAAAG
AAGAACATCTTGTTATTCgcgtattttcatttttatcaaaaaagggGCAA
AAAATATTGTTAGGCTTTTCACTAGAAACTTTCGGTAATAAAAGAAGTGA
AATGACCTCACCCTCATCTTTCTGTTGATGaaaatacacgttgtttttct
ctaagaatatcgaaaaattttaaagccttggctttttgagttttaaggct
aaaaatgttcttaacatgttcttattttcgtcatttttttaatcattttt
gtccattatcctttgaaatcgggtgttttagagtttgcaaagccttagaa
tgttcttaagttgttcttaacattttggctatcgaagccttatgttctta
tatagtttgtccttataaaaaacgtgtatcttttTTGAGTTAGTTCTTCA
TCTTCGTTTTCGTTTTAATTCgcttaaaaagattttctatttattttaac
gagaaaacgaaagtgcgaTGAACAAAGGGAAGTATCCCTCCTCTATTATT
TGTTTTCACTCTCCACCTTACGGAGTTTAACTTTGCAGTATAGCTTTAAT
GATAAGATTTATATCTCTCCTGCGTAGGAGAGATTCTAGACATGTGTATC
TTTTAAAAAAGACGCAAAAACGCGTTTTGAGTTAGTCGTATCTATGCAAG
GTTGCGCTCAACGACTTTCAGNAAGACGCAAAAACGCGTTTTGAGTTAGT
CGTATCTATGCAAGGTTGCGTTCAACGACTTTCAGAACATTCTCTGACGt
cttcaaaataagaaaaagaaagaacgaagaagaagaaggacgTGAAAAGT
GTGCTGTTTTTCTCATCAAACTTCAAGACTTAAGGACAAGACGAGAAATC
AACGAGGTCAACGCAGAAGCAACAAAGCTTACGGATTTAATACTGCGATT
GAGGTTTTATTGTTTGTTTAAATACGATATAACTTTTCATCGCCCTGTTC
ATTGGTTGAAAGGTGTCAAATTATATTAAAAACTAACATAAAAGTTGAGC
TTATTTTTGGGATAtcattaagaaaaataaaagaccTTGTTATTGGATCA
TCTTGTTTCGAGTACTTATTTGAACTTGAGTGgaacttgatttaaaaaaa
acatcttttcgGTACCCCGATCTTACATTTATTATAAGACTTTAGTTTAG
CAATCGTTTAATCATTTGACCAGTAAGAAACTGCAAGAAGACATTATTTG
TAGAAAATTAATGGACCTTGTAGACTTAATCATACCGACAGGTATTCTTA
CACCAACAACTATAGTCTTCTTCAAGAGTTGATTTGACTGAAGTTGATTG
ACAGGCAATCTTCAAAGATAAGACAAGTTCTTTTTACAATAATCGCTGGC
ATCTCACCCACAATAAACAGTGTTGAAAGCGAGAATGTTGATTATGCCTT
TCTTTACCAAGAAACAGAAACAAAACCAACAACACCAACAAGCAGTTGAA
ATCGAAATTGAAGATCCTAATCATAACAATNAAAATCAACAACACCAACA
AGCAGTTGAAATCGAAATTGAAGATCCTAATCACAACAACAAAATGGATG
AAGATACGTTAAAGAAATTACATTTGTATCAAAAGAGAACGTACGCAAAT
CAAGAACAAAGTCGACGTCGCTCTATACAACGTCATGCTCCTAATACATC
GCGCAACGGACATTCACCGTTTCTGCAACGTTCTAGAACGGTGTCGGCAC
CAACTTATCATTTATACGTTGCCAGGGATAACATGAACGAACCGAATCGG
CACCGTGTGAATAGTGCTGACAATGCATCACGTTCTTCCGGTCGAATACc
ggaaaacgttgaaaatccgTCCGCATCTGACTGCTCGAATGACTCTCCGC
AAAAGACAATATGTGAAAAAGTCGGAAGTATTAAGCTTTCGAAATTACCG
GTAACGAAATCCTTCAGCTCTGACGGTGCCGAGTTGAGTAGGACGGAAGG
TTGTTCTTCACCGTCTTCTGTTAAGAAGAAAAATATCCTAACCTCTTGCG
TACACGCGTACAAGGATGATAAAACATCCTAACCTTTTGTGTATATTGGT
GATAAatattcatttattcattcTATGCATAGATCACTTGTAATCAAAAC
TTGGGACGATATTGACTTCTTTATTGTTGGGTTTTTGTTTGAGAACTCTT
ATGGAATAAAACAGTTCTGACCTTAATTAATGGATTGTTACGTATATGAA
CGTTGAAAGAAAATTGTGACTTGAAGTAGCATGTTTAGGTTAAGTGACAA
GGATCGTGTTGCAAGATTGACGTCATTTATCGTGTGGTGTATTTTGTAGT
TTGatacaaaaattgaatttatatTGTGAAGGTGCAACATATCTTCTTTT
AAAGTCATTTATCACATTTTAAAGTTCTAAATGTTGTAACGTTTCGATCC
CTTTAAATTTATTAAAGATTTGGTATATATTGATCAAAATAAAACAGATT
AGATATTACAACTAGACATTTTCTTTTTCCCTTGACAAGTGGGAAGTAAG
TTTATCTTGGCGATTCCAATCTAAGACATTGTTAAAGTTTGCAAATAGCC
TGTCATTTGTTAATCTCCGGGCCGATTCTGATACTCCAGACTGgcacgta
ttcactctaaaggtCATGGCTCCGTAAGGGAATCTGCTCAGCTAGGTGCA
CCGCCTTGTTCTTTTTTGGGATTAATGTTAAATTAGCTTTTGCGCGCATT
GAGTGGCTAAAGCAAAACAGGTCGCAGCAGAATTAAAAGCCAATCACAAC
AATAAACATTATAACCATGcgctttcgctttcgatttcaagtaAAAGGTG
GTATTGAATGTTTTTGCTGAACAACGACATACCCCTTTTAGAGCAAAGAG
TGGATGTACAGACTCGGCATATAACCAAGTTCCTTGGTATGAcctataaa
attttaaatacgGAGAGAAGAGAAATTTCTCGGAATTCGGACATCTTTTA
GGTTATTTGGCAAATCCACCAACCATCTTTTTCTCGAATAAGTTGAAAAT
TTGCCATCGTTTTTAGAAGTTTCCTTTTTCCTTATTTCTTCATAAGTATC
CGTGAAAAGCACCTCAAACAATCGATGGAAATtaatatgaaatgaaaaaa
gttgTTTCTCTCTTGTTTGcgatgtttttttcattttcatttaccGATGG
TGTTTGCCGAATGTTATTAACACAGTTGAATAAATCTTTGTGACGTCTTT
ATTTAGCGCATTGCCTAGATATCACTAAGTCGACTCATATCTCAACGTCA
TAGCTCCTTTATTTTAGCACAAGACCGTTAATTTTCCAAAAGCATGGATC
TTTAGTCGACTCGAcctataccttatcggggaaaacttcgtcggggaaaa
gtgacgaaattttggacgtgtgatgaatattttccccgacgaaaattttc
cccggccttaatgcgtttaccaactaccagcaagtgacgaatttttcccc
tacgaaaattttccccgacaaaaatcttccccgacgaaaattttccccga
tgaGGTAAATAACATCGCTGGCTCATCACCAGTTTTTGGCAGTAGTCAGG
ATGTACACAGATCCTTTTTACAGTGGAGTTTCCAAAACCCAAACACACAC
GGTATAGACACAGGTTTAGAAGACATTTTTAACTGAAAAGACCAGCAAAC
ttcttcgaattaaagaaaatcTAGAGTAAACTAGTAAATAAACTAGAGga
tttttttgactttcgttttcaaaaattatatgaaaacaacaaaactatAA
AACATATTCCAAAATCCCATTAGACGATGTCATCGTTctccccccccccg
gaccttattaggaccccgcAGTTTATTATCTGTGAGAATATtttcaagtt
agtaccctatgggttagtaccttGCCTCTGTACCCCCtgtatttttgggt
tttcagaagtacaatttccatcccccggcaattaggccccccctgtttat
taaaattcaaccccccccgtttatttggaacctaagagtacagtgatagt
aaaggcgggaaaatatggcagtatggcgttatggcagtatacggaaaaaa
tcggcgggatcGTTTGCGAATCTTCTacggctttgggcttatttcttaaa
TAGTGATCTAAAATCCCATCAAAGACGATAATAAAAATAAGTAATCTTTA
TAGCGCGTAATCTTTGCTTAAATTAGACCACTCAAAAAAAGGGATTATAT
GAAACAAACTATTTGTTTAGATAGAGCAAACAGCCAACATGAAGTGAAGG
GAAGTGATTAGGCAAGAGAAGTCGAGAGTAAGGTCTAAATCGTAAAGATG
GCGTATAATTTTCCTTCAGCCAGGAGCGTAGAATATCTGTGCTGCTGGAT
TTTGCAATGACAATAATAATGTTTCCTGAtacatgaattaaaaaaaaatt
cccaaaagatTTAATAGTATATAGATAGAGAGGTCAAGACCACTCCTCCC
TTAGGTAGGCGCACGCCTCCCAAAATTTTATTaatcaaaatggaaatttt
atctGAGATAGCCCCTTACATCACAACATCCTCTCTCGGAAAATAGGAAA
CCAAAAgaacaataggttaaattttacGAAGAGgtagcaaaatattttca
agatttgcCTTCTTAGAGGGGAAGGGGAGAAACGGCCGTTCAGATTTCCA
CGAAAATACTTATGCACCATGTGGTCACTTTTTCAGGACAGGCTGATAGG
CCGATTGGCTGtgattatgaaaatttttgagtATGGATGGAATTCTTTTG
TAGCCAATCACAATTCTTTAAACCACAAGGCAGATAGGGTTAGTTTGTAT
TTCTTGGATATTCAGCGAAAAactctgttttgaaatttggactgaatAGT
AAAGTAAATGATGCTTAATGGATTGGCTTTTCAATTTCATACTTCCTCCa
acagacttttttctttttcttcaaaatttcaggtGATTCAAACCATTTGA
AAGGTTTACTGAACAATAAACATCTTCGTGATATGTTGCATGAAATCAAC
ACATCACAAAACCAATCCAAGACCATGGAAAAGGTGATGCAGATCCCAAT
TTTCACCGAATTTGTTGACGAATGTTTGAACGTTATCGAACCTGATGAGG
AACAACCACAACAAATCATTGATCTATCTCTCACTTCAAGTTGAAAAAAT
GGTACACATACTTCAAGATGCctttgaaaggtatttttatCTGGCTTTTG
ATTCACCTGGTAGTCacctagctggcacacaacgttgttttaacgttcaa
gtaacgttatttggacgttatgaatgtcacatggacgttgttttgatgtt
gtgtGCCGTTTGGTCAAAATTATACGTTGTGGAACAACACTCGTGTTCAA
TGATAAATAGACGAGCAACGAAAAGCAAACGAGATTTCAATAATGGTTtg
ctttaagggctctggacatacccaatttttcgattttacactaactgaaa
t
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048176-exon-scaffold_141-1491911889:375469..375614 | TCONS_00048176-exon-scaffold_141-1491911889:375469..375614 | Clytia hemisphaerica | exon |
| TCONS_00048176-exon-scaffold_141-1510915933:375469..375614 | TCONS_00048176-exon-scaffold_141-1510915933:375469..375614 | Clytia hemisphaerica | exon |
| TCONS_00048176-exon-scaffold_141-1575043694:375469..375614 | TCONS_00048176-exon-scaffold_141-1575043694:375469..375614 | Clytia hemisphaerica | exon |
| TCONS_00048176-exon-scaffold_141-1491911889:376196..376227 | TCONS_00048176-exon-scaffold_141-1491911889:376196..376227 | Clytia hemisphaerica | exon |
| TCONS_00048176-exon-scaffold_141-1510915933:376196..376227 | TCONS_00048176-exon-scaffold_141-1510915933:376196..376227 | Clytia hemisphaerica | exon |
| TCONS_00048176-exon-scaffold_141-1575043694:376196..376227 | TCONS_00048176-exon-scaffold_141-1575043694:376196..376227 | Clytia hemisphaerica | exon |
| TCONS_00048176-exon-scaffold_141-1491911889:378356..378568 | TCONS_00048176-exon-scaffold_141-1491911889:378356..378568 | Clytia hemisphaerica | exon |
| TCONS_00048176-exon-scaffold_141-1510915933:378356..378568 | TCONS_00048176-exon-scaffold_141-1510915933:378356..378568 | Clytia hemisphaerica | exon |
| TCONS_00048176-exon-scaffold_141-1575043694:378356..378568 | TCONS_00048176-exon-scaffold_141-1575043694:378356..378568 | Clytia hemisphaerica | exon |
| TCONS_00048176-exon-scaffold_141-1491911889:388151..388669 | TCONS_00048176-exon-scaffold_141-1491911889:388151..388669 | Clytia hemisphaerica | exon |
| TCONS_00048176-exon-scaffold_141-1510915933:388151..388669 | TCONS_00048176-exon-scaffold_141-1510915933:388151..388669 | Clytia hemisphaerica | exon |
| TCONS_00048176-exon-scaffold_141-1575043694:388151..388669 | TCONS_00048176-exon-scaffold_141-1575043694:388151..388669 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_141 | supercontig | scaffold_141:375469..388669 + |
Blast
BLAST of TCONS_00048176 vs. Swiss-Prot (Human)
Match: ZNHI3 (Zinc finger HIT domain-containing protein 3 OS=Homo sapiens GN=ZNHIT3 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 2.253e-18 Identity = 57/159 (35.85%), Postives = 89/159 (55.97%), Query Frame = 1
Query: 88 CLVCDETDAKYRCPKCKIVYCSLVCFKPHKESCANTVQQPMTKLDDRNTKPSNEATINTPFVGDGGERMSNNLTSPESSVPQHLLLTEENDRVPEELLRKLGDSXXXXXXXXXXXXRDMLHEINTSQNQSKTMEKVMQIPIFTEFVDECLNVIEPDEEQ 564
C++C E KYRCP C++ YCS+VCF+ HKE C N +P+ K R+ P+ T+ D + +++ L S EE DRV + L+ LG+S L+ LL N HLR ++ ++ ++++K M MQ P+F EF D CL ++EP + +
Sbjct: 11 CVICLEK-PKYRCPACRVPYCSVVCFRKHKEQC-NPETRPVEK-KIRSALPTK--TVKPVENKDDDDSIADFLNS-----------DEEEDRVSLQNLKNLGESATLRSLLLNPHLRQLMVNLDQGEDKAKLMRAYMQEPLFVEFADCCLGIVEPSQNE 153
The following BLAST results are available for this feature:
|
