TCONS_00048151 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048151
Unique NameTCONS_00048151
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1360

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048151 ID=TCONS_00048151|Name=TCONS_00048151|organism=Clytia hemisphaerica|type=transcript|length=1360bp
AATCACGTGGATACAATATGTCCAATGATCTCCTCTTGTGAATACAAAGA
CTCAGGATGCTACTTTAAGGGCACCAAATTACAACTGGACAATCATATGG
CACAATCGGCCAACATGCATTTGTCTCTTGAAATGAAAAGtgagattttc
aaaatgaaaaaagaattcgATCAAAAGTTAACAGCAAAAGGTCTTGAAGc
tcaacaaatgaaaaatgaatttgctGAACAGTTGAAAATGAGGGACAACG
AAATCGGAAAAGTCCGGTTGGATCTTGATGGAGACTTGAAAGCAAAAGAC
AAAATGATTCAAGGATTAGCGGAGCGGTTAAAAATTGCAGAAGAGAAATT
GAAAGGGGTCGGCGAAATAGAAATCAAAGTTCAGATGAACCAAACCGCCA
TCAAGTCcttggagaaaaaattgttgACGAAGTTGAAGACAACCGATAAA
tctctttttgatttgaaagaagAATTTATGCTGACTAAGCAGGAAgttga
aaaagtcaaagaacAGCATCAAAAAGACGACCTTTTTAAAGCATCGGGTA
GAGGTTTAGCTGTAAAAGGGGAATTAAATTTGGCTATCTGCGCACCATCA
CTATGTAACTATACATGGACTATCGAAAATTTCAAAGAGAAATTTGACGC
TGCTACGGAATGGAGAGAGTATAATTCACCAAGTTTTTTTACTAAGCATG
GTTATAAAGGATGTATTTCCTCTGGGTTTCGCCAGaccaataaagacaaa
aaaaaccCTTGTCTATCAGTTTACTTTCAGAACAGAGTGAGTCCTTATGA
CGTTACTTTAGAATGGCCAATGCCTTGGAAATCATTGATTTTCACTTTAA
TCTTTAATGGAGTTGAAATTGCCCAAACTGTGAGAAGAAGTACAGATGCA
GGAGGTAAATGGAAAGATTCATTTAAAAGACCAGCTTTTACATGTTTCTG
TGTGGGTAATCGGTCAGCCTTTGAGCACGGCTTATTCAAGAACATAACTA
TGTATGATAGTGTTGCAATAAGATTTGAAATGAATTGATCTTATACTCAG
TAAATGGTGTAAACTACATTTGAAACAAACTATCCATTTCCAAGAAATTG
TATTTATGGGTGGAGCCTCGTGTCAGTCAATCGAATTATTTATCGTATTT
AATCAACTTTTCAATTCAAGACCTCCATTTAGACCAGAATGATCGATGGT
AATTACTTTACCTTAAATTGACTTAACCTTTGGATATTTTGGACGTATTG
CACTTTCGtcgtctttttagagtaaaTGTATGAAGAGTTTATAAAAATTA
CtaaattcaaaaatcatttcgtaGATAACTAATAATTCTCGGGTACgtaa
tagccggggg
Run BLAST on NCBI

transcript from alignment at scaffold_141:176610..202993+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048151 ID=TCONS_00048151|Name=TCONS_00048151|organism=Clytia hemisphaerica|type=transcript|length=26384bp|location=Sequence derived from alignment at scaffold_141:176610..202993+ (Clytia hemisphaerica)
AATCACGTGGATACAATATGTCCAATGATCTCCTCTTGTGAATACAAAGA
CTCAGGATGCTACTTTAAGGTAAATTTTTCTTATGTTGAAGCtgcttttt
tcaatttccaaaggaatgaaatgaaaatttccgaATAAATCGAGAGACGA
ACTAAGCTGGCTAACTACAAAAGACTCTGCAAGGAGTCTTTCGTGGATAA
AGTGCTACAGTATCtttattttgtcttatttttcaAAGTAGCTGTACTCT
CCGGATTTTTTGTCATCTAAGTAAGTACAGTAAAGTATATAGGTAATAAG
CCAGATATATTATTTGAAAAGCTAACGCAGTTTCTAAATTGTTGCGTTTC
AGGGCACCAAATTACAACTGGACAATCATATGGCACAATCGGCCAACATG
CATTTGTCTCTTGAAATGAAAAgtgagattttcaaaataaaaaaagaatt
cgaTCAAAAGTTGACAGCGAAAGATCTCGAAgctcaagaaatgaaaaata
aatttgctgaACAGTTGAAAATGAGGGATAACGAAATCGGAAAAGTCCGG
TTGGATCTTGATGGAGACTTGAAAGCAAAAGACAAAATGATTCAAGCATT
AGCGGAGCGGTTAAAAATTGCAGAAGAGAAATTGAAAGGGGTCGACGCAA
TGGAAATTAAAATTCAGATGAACCAAACCACCATCAAGTCGTTGGAGAAA
AAAATGCTGACGAAGTTGAAGGCAACCGATAAAtctctttttgatttgaa
agaagAATTTATGCTGACTAAGCAGGAAGTTGAGAAAGTCAAAGAACAGC
ATCAAAAAGACGACCTTTTTAAAGCATCGGGTAGAGGTTTNGAAgttgaa
aaagtcaaagaacGGAATCAAAAAGACGATCTTATTAAAGCATCGGGTAG
AGCTGTAAAAGAGGAATTAAATTTGGCTATCTGCGCACCATCACTATGTA
ACTATACATGGACTATCGAAAAATTCAAAGAGAAATTTGACGCTGCTATG
AAATGGAGATCTGGTGATTCACCATATTTTTTTACTAAGCATGGTTATAA
AGGATGTATTTTCTCTGGGTTTCGCGAGACCAATAAAGACAACGAAAACA
CTTATGTGTCAGTTTTCTTTAATAATGTGGTGGGACCTCGTGACGATACT
TTGGAATGGCCAATGCCTTGGAAATCGATGATTTTCAATTTAATATTTAA
TGGAGTTGAAATTGCTCAAACTGTGACAAGAAGTACAGATGAAGGAGGTA
GATGGAAAGATTCATTTAAAAGACCATTTAGGGATATATCTTCATTTGTG
GGCAATCGGTCAGCATTTGAGCACGGCTTATTCAAGAACATAACTATGAA
TGATAGGGTTGCAATAAGATTTGAAATGAATTGATCTTATACTCAGTGAA
TGGTGTAAGCTACATTTGAAACAGATTATCCATTTCGAAGAAATTGTATT
TATGGGTGGAGCCTTGGATTAGTCGATCGAATTATTTATCGTATTTAATC
AACTTTTTAATTTAAGACCTCCATTTAAACCTAAATGATCGATGGTAATT
ACAGTAATTACTTAACCTTACTCTTAGATTGACTTCGCCTTTGGATATTT
TGGACGTATGTTTTCGTCTTCTTTTTAGAGTAAGTGAAGAGTTTATAAAG
ATTACAAATACTCTTTGGTTccaaataattttcgaaaattaacaATCAGG
GGTggttatttggaacctaagaccatgttcagaaacgaaacggttccgaa
acaagtgtagacgtaaaaattggtattttttggacctacctccgggtgcc
ccggtggaggtcctataaattaacccatgtctgttcgtccgtccgtccgt
tcgttcgtccgtctgttaccagNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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gggacttattttcgcggatgacacccaaatccgcgaaatccgcgaaaatt
aatccccgcgaaaatttatcccattaaagtatctgGCACTCAGGTGCTGA
GATTTCCTTCCGACACGTTAAggtctgaaggtcgggaaaattttcaacat
ctggaaggtttagattacaaaattttaaaagaccgcgtcaaggattttga
aGAGGGAGGAACAGATTAGAAAGCCCGaggggctagatgtcgtgctttgg
ctgagaagtgtgccgtggttaggaaGGAAAttctacctaggtcacgtgac
attagaatagaatttcagtgcttgaccaatcagaagcttagAGGATTTCT
GGAAACAACAGAAACAATATttcttgcgatattcacttttttttgcctgc
gatgacTTAAAGcatgacatctagcccttcgggctttataaatctgggCG
GGAGGCCTaataacccagccctcgttttcggggattggcgggtccgaCCG
ATTTATTTTTACGCGTaagggtagttgaacccgactagGGGTGCAGCACA
TCAAAGGctgactatcattcctctctgatgggaaattggcccgctccttc
agcGCTTTAACGTGggtggccgccaatccgccatctgAATATCAGATAAC
GCAAGAGTTTGGTATAATTTGCTTTTCtaagaagtttttatttttgtgcc
AATGatacaaaaagaacaaaaagcaTCATGGGAAATTAATGGGATCGAAA
CGGATTNTGATTTCACAAAAAGAACAAGAAGCATTATGAGAAATTAATAG
GATCGAAATTGATATTGCTGACTTACCATTAAAACAGCCTTTATTTCGAG
GACCTAAAGCTTGTATTTTGTTACCAGGACAACACCCGAACTTGGATTCC
ATGCAAGCAGCTGGCAAGGCTTTCACGTCTAATGAatagaaaaaagacaa
aagacaaatatagtaagtttcaaaaatttgatgatTCGGCAAATTTCTTT
TGCTTGAAATCTAGTAGTTTTTGTTTAGACGATATCAGAAAAAttaggct
attccagaaaataaTTGTACCCCTATTGAGGAGAACCCCATTgacttatt
tttcaatttttaggagccccataatttttttctcattcttgGACCACCAT
GAATTTTTTGCCTCCTTTTattgaccaccctggattttcaacctcatGTT
ACTAAACAACCTGAATTTTCAACCTCAATTTATTGACCATCGTAAATTTT
TACACGAAAAAGCGAAAAACCTGACCCCCTGGAATTTTTACTTTCCATAT
TACCCTGTACgccacacctcctcaacataggggtacGGACTATTTCCCGA
ATAAGGCTTACCACACATGTCGCACGTTGCTCTACAGAACCGTTTCATTA
AATTGGTGTGTTTGGTACATGCCCCGTGTTCTTTCCATTGTTTACACAAT
CCCAACTCACTCTCCTTCTTGTTGTCATAACAACGGACGGCTGAAATAAA
CAGAATAAACAGAATGAAAAGTGCTCTTATCATCAGTATTTCGAACTCAT
ACCACTATGTTGGCTTTTATATCAAATTGTGGGACACAAAAGGCGTAAAA
AAACCTTTCTTCTTTCGTTGATTCTAATCTTAAATTCTACATCTATAACT
ATAAGTCTCTTTGTGACCTCATCCTGCTTTTTTTTGGCCTTCTATTACAA
ATCACTGGACCAAAAAAGGTGTGGAGCCtttcttcttttgttgattATAA
TCTTAAACTCTTCATATATGAGCTTGGTAACTCATCGCTTAGTAATACGA
TGCAACCAATGTGTTGACTACACTTTCAGGAGATCATCCCTTGATTATTA
TCTATGTTCAATGTAAACAGTATTTTANNNNNNNNNNNNNNNNNNNNNNN
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TCTCTGTGGTTCTCACTTAATGTTTTTTTccacttgaaaaaaagtcaatg
aAGGTCAATGATTCTAAAGGTGAAATTTATTAGCCAAGCTCTCGTTTCTA
CACACGGGTAATAATTGCTTAAAGCAAATAAGTCTACATTTGTGTTATGC
AGGATTAAATTTTGCACGCTTGTCCCAAAGGGTTGGATAATGTCGGCTAT
GTGCGGAGTAGACTAATCAACATCCAACGAAAAAGTCCatagaaaattcg
caaacgagttttttttcctaaaagagtttacagtcgatagagtttgatat
tttcttcgaaactctaccactgattttttttcaaaaaaaacagtATAATA
TAACGGCATAACGGCTACAAACTCTGCGCGTAACGTAACTGTAATGGACG
CTAACATCGTCTATGTGCGGACtcgacctccgaaaaccgaccctcgAAAA
GGTTGAGAAACCCTCGTCCAAAGCAAGCCTTTCGAACTCAACGAAATACT
TTTTCTTATGATATTTCTGTCTGTCAAACCTTAATCTTTCTAATTTTATC
GGCGAACTTCATTTTTCACTCATCAGAGCCCATCATGTCCGTCATCCAGA
AAAATGTTCTGACTGCAATGTTGAATCTATCATCATCGATAAAAAGTTTA
ACCCAAAAACAAACGAGATTACGAAAATATTTCGACTGACTGTGATTTTT
AATGAGTTGAGAGGagtctaaaaaaaacaaactagttttatttttattca
acacTTAATTTGTCGTCAAACCCTAATAAAACTCTCTACGATGGTGCAGC
ACTTTTTCGGAGACTCTAATGCCATATTTGCAGAAAAATCATCCCTCCCC
CAAAGTGTTAAAACCTTTATTAGCATGCGAATGGTATTATAAGCTCACAC
TTGTAGAATACGCTTTACATATTAAGAACCAGAAGAGTCTCCTTAAACTC
TAAGAATGTGACATATTTTCTAAGGCTGAAATGTTCAAAAGTTGTTTGAT
TACAAAATGCTTTTAATATCTTTGCCATTTGGTTTTCCTTCTTTTATGTT
TCACAAGTTATGACCTAAATCGAGCTTCATATGCGcttctaaaattgttc
ttagagAAAATTTACGTCTACCGAAAGAAGGCAGGGATTAAAATTTCTAA
TACTTTGTACGTACTTGACCAGACTTTAAGTGTCTCTCTTGTTTCTATAG
ACAACCTCTTACAAATGTAACATCTTGTTTTTCTTGGTTATAAGAAACCC
TTAGTGCTTTTTTGAAGGGAGACGTTCGTGCttattacacccctttctca
cagacccgatagGATTTTTTCAACCAGGGGTTGAAAATAACGGACTCAAA
CTCGACgaggattgatatttccatagctttaatggctggggatttctatt
cttttgttttcgagttagaaattcaatggggatggggaaaatagcataat
atttagCAGTGAGGatcggtttatttgattattttcagtgtcAGTTTCAA
TATATCTTGGATAGATACCATTAGTACGTAAActgacaatttttccagtg
gggacaGAAATTAcaagataattttccaccggggacgataatttgatcaa
ttttccagtgcgtagggttcccagtgggtctgtgagaaggggtgtctTAT
TACAGCTTGTTCTTATGATAAAAACAGCAAAGTCTGTTATAACTGTCAAT
AGCAGACGAATAATGTTTCCATGTTCCGTTTATAAACACTTAAGAATTCC
GGACCTATTTCCGACTCTTATCAAAGACCCGTGTTTGTAATTACGGTTTT
ATGAAATACGGGGAACAGGAATTGTAAGCTATTTCTATTAGTGTTTATTT
GCTTGTTTCTAGTCTTTATTCCTTTGGCACCAACAAGCTTTTCACTTCCT
TATTGTCTAGCCTAGTTACGATCATCAATGAAATAAAACTGAAAGCTAGA
AATCTTAAAGCCTTTCCAGCCGATCGAAAGTGTTGCCTTAAAATTTCAGA
GCGTCACATTTTAGATGAAAGATTGAATCTATCACAATTTACAATATTAT
TCATACTGTAATTGTAGATATAGTATTTACCGTAACTACCAATATGATAG
ATTTACGGATGTTtatatatctacacatatggtagaaataagtgcgAGAT
TGGCCTGCTAAGCTACCTCACACCTTCTTCTGTTCCGAGAATAAAACTCt
tcaagagtaaggcctaataCCTTTGAAATTATTTGGAACGATTTAACGAG
ATTTTGACGAtatccccccccccgggactttacagggcaaaaaattgaat
tgaaatgatgaaaaaatgaaCTAGTTGAAAATTCGGTCAAATCTATTATA
ATAAagtgatatatttttgaaataagtGTTTACTCATCCTATATGCAGTG
GTTCTAAATGACCATTAAATGACCAAATCTTGCTCCACTGAGCCTTTGTT
CTGCCTAGTTTTTAGTTCCGTGTAATCTGCAAATATCCTCGTTGATGAAT
TCGAACAAAAAATCAGGATTATCATTAATCATTAAAGCTCTTCGGTGAAA
ATTTTCATGAACAAAAATCGCATCTGGTGGTAAGAATAACCAGTAAGAAT
ATCCTCTTCGTTCGAATTTCACACAAACTGTGCTTCTCCCTTCATTACAG
TGTTCGATAAGAGATGATAAAGAGGAACTTTCATACATTTCAACATATTT
TTCATGAGTTTCTTGCAAGTTTTCAATGGCTTCAATATATCTTGGATAGA
TACCATTAGTTCGTAAACTGACAtggaaaataatctttaaagGTTCCTTT
TTCAATTCCTTTTGTCTTATATTCGCTTTGTTAGTAATCCTTAAAGCCAT
TGGGAGAAAAGCTTCGTTTATAGAAATGAGTGAAATTTCGATCCTGGTTA
TTCCATGCAAGCAAGTCTCATTAAATGATCATCTAGTGGGAGAGCTTGGT
AAAATTGATATCGGTTATAATCAGGAGGCTGTTTGATGAGATCTATCAAA
TTCTTGAAATTCCAATCTGAGACGTATTTGTTAAGAAAGATTATTCTATG
GAAAGATTATTCTATGGAAAGAttattccatgatggtgatattcttagca
ttattcttaaatttttggccattttcgtcattcttataaagtgtattctt
atataaaaatcaGAGTGCATTGGTCCTGATTACCAATGTTTCCTTTCGAc
cgtgaaattgcatatttgaCAATATactttcttctttcaaaaagTACACA
ATGCGACCCATCAATTTAGATCTCGTAATGTCAACATTATAATGAGAGTT
GACTTTATTCGTATAGCGCTTCCGTCATGGCAACATATAATGCAGTTTAC
TAGTGGCAATAGGAAAGATTAAATTTCACAATGCTCTGTTTAGTGCTAAT
TTAAAAAGAGCCTCATCAGTTTTACTTCTCCTAGGAATGCTATcttaata
attattaaaacgatttatttttattgatagATCTCTAAGTTAACTTTTGG
TGATATTTTTTGTTCGAGAGATAATTGAAAGCGATAGTATGGAATGACTA
ATAGTAAAGCTataatgaaatttttcattagAGTCTATCTATAAAGTTAG
TTAATCCTACTGTAACTTGTAAAAGTTCGGTAGTATATTGGTAGCTTAAA
TGAGTAGTGAAGGCATAGTCGGTAAACTTGACCAAGcatgttaattttta
tttttcatacatGTTTCAATTTAATAATCATCATCAGTGTTTTTAGTTCT
AAAAGTAAATTGGTAGCTTAAAGTTAGATTTTTAAACAATATGGCAGCTT
GTAAACCAGAAGAGTATGGTTTTGATGTGACATTCATCTGGGAAGACGAA
AAATCTGAAGTATCTCAAGCAACAGAAGAAAATTCTGTACAGAACGCCAA
AGAAATCAACAGAGATGACATCACTTGTGCAATATGTCTTTTGGTTTTGC
GAGAACCAGTACAAGCCGTGAAATGCGGGCATcgattttgtgaaaaatgt
aTTGGGGAATTTCATCTTCAGAAGTAAGTGTGAACAGTAGTCACGTCgaa
attttctatatttttgttgGTCGTCATTTTCTTGTGTTCTATAAAAAGTT
TTCGTTAAGCAAGGAATCTAcagctcaaatttttaattGCATTGGAGAAT
TTTTTATGTTAAACATTTTATTCTAGTCCGGGAAAATGCCCCAAAGATTG
GCAAGAGATTCAAGTTTTTCCTGATgtaggaaaaaaaagagaaatactCA
GTTTGAAGATTCGATGTGCGAATTTTGTTGATGGATGTACGTGGCAAAAT
GAGCTCAGAGAGGAAGAGGTTTGTAGGCATTATTTCATTTGATATCATCT
GTACGCAGCGaaaagaagttttcaaaaatggCTGTTctagaaaaatggtc
aaaaacgaCAGTAAAGTACTTTGAatctttctttctaaatttcTAGTTTT
GTGATCTGACATTGTGTTAATTCCTACAGACCCTCTACTTTACGCAAATT
TTTACCAAAATGGATAGTTTAAGTTATGCTCTCATTAGGAACAATTTATG
TAGTgaaaccatagtataagaaagccgcggctggaatgatgacgctattg
tttttgttgtaaatagatgttctatctgtgtctcTGTGGTTTATANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTCACCgaaccataaaaaaatttgttctta
cgacatagatagaacaacagaaattcagctgtactcattccagccgcggc
tttcttatactatggtgaaACCATATCACCTTGGAGGAAAGGGGGAGGAA
TTACTTGATGATATTTATAATGACTTTGATTTATAATAAGATTATAAAAA
GGGGAAGAGCCTAGAGGTAGAGGAGATTGATCTATATTTGAGGTAGCAAC
CCCCTTCCGTACTTAAGCTTTTGgccaattttctaatttaaggagttgat
tttattttgcaataaataataacaatcctttatcattgttttaggTTCAC
CTGAAAACTTGCGGTTTTGTGACCGTTCCTTGTGAATTAGATTGTGGAGA
ATTCGTCCTCCGTAAAAACGTAAGAACGATTTGTTATCATTTGTAAGATA
TGTGAGAGGCCtggaaaacacgagttaaaggACCTTAAAAAACCTTAAAG
TTATgacgtcgtaactcgggtttttttggCCTTGATATATATGAATACAA
ACCATGAAAATTTTCGGGATAACTTTCTGTAAGGCCCTCAATGCCCGTTA
GAAAAACCCGAGTTCGGCAAACCCTAATTACctatttgtgacgtcataac
ttgagagatatgacgtcattttagaAGATAATGAATTAATGATAATTCGA
TTTTTTCGTGGTTACCTTAATCGTTCGAGTTGATTAACTCTGTTGATTAT
GACGAACCTTAATTTTTCTAGTTAGCAAACTTTTATTTCTAAGGCGCCCC
TAAATTTTTCGTATTTTAGAGGTGTATATCGAGTtatgaaatttatattt
tggaatcttttaacttgtttttttttggtgtaagatttttttttcgagtt
aCTTGACTCGGATTTTTAAGATGCCCGAAAGACCCGTGGctgaaaaactc
aaaatatctAACTGAGGGAGGGGGGAGGAATGTAGTGCGAATCTGTAAAG
GCGAGTCCTTACGCAAATTGAACATTTGCTTCAGTAATGTTGGAAATAAC
TTAGTATTTCAAGGATGAGATTTTTtggattatttattttttttattttt
tatttattaattgtctttcaggctcttccatattttacaatggctattcg
tcctatgtaaaaataatcatatttaaataaaaagataattatattctatg
aaaaaaaatatgctgtagaaacaaaacacacaaaaaaaaacaactcaagG
ATAGTAAAAACGGGGATAATTTATTATTTCGCGAAACCGTAAaactgtag
aaacaaaacacacaaaaaaaaacaactcaagGATAGTAAAAACGGGGATA
ATTTATTATTTCGCGAAACCGTAAaactgtagaaacaaaacacacaaaaa
aaaacaactcaagGATAGTAAAAACGGGGATAATTTATTATTTCGCGAAA
CCGTAAaactgtagaaacaaaacacaaaacagaACTCAAGGATACTGGCA
GAGCTCGCAAAATTgcagaaaaagaaaacagaaagtaTAACTTGTTGGTG
TTGTAGTGGCTGATTAGGAAAAGTTCGGTTGAGTTGTAATAGTATTGAAG
TAGCTAATCCTGCGAAAATTTCAGTGTTGATCAGACCACCAGactaaaat
atcaagtaaatatTTTAAGGTAAATATTAATAATATAACCACTAGACCTC
ATGATCATAGAATCTACAATATATTGGCTTGAAataggaaaaattttgaa
agtgagtgagGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttcatgtattgcttggctc
tacatatgatacctctaactttgaacacctccagaatgttgaaaaaagca
ttttacgagataagtttcaattataattttcatcattattcatggaAATt
gttaatcgacagatttggcttggcgtcagttttgtttggttgatgtttgg
tatcatGATCattaaagcaatgaaatgccacacagtcactctacacatga
tgcctccagccatgattggtatcagaatgttggaaaaaaacattttacga
gaaattgttgatagaaattatattgacttatttttacaattttggcggtg
tgggtttagttggttgataatgtttacactgtgggatggtttccaaaaaa
atgttatattgattgttgtttgttggaattgattaccaaaaaaaagaaaa
gagaacctttttttgataaatactttatttttttcatgattcgAAAAAAC
CAtgtggatggttgacatctttctctagtcttgtaaaccaatgcagtgtc
tgttttcaaattttgaaagctctttacctactgaattgaagctctgacta
gctctgtttttaaaactttgagccatgattttttctttgctgctattaaa
gatagatttttaaattgtcgtagtgtaaatttatggtaaaattttagttt
ttgagtttagttcatctacagtagtattttttcagtaatcctttcttgta
aatttagtaacatttaaccagactcattgccctcattatattcaaatttg
tatttttttaggactgataagtacatatttttaaataccaaaacaaagca
aacatgccaaacaacatgccagttctttctggacaaatatgtatacttta
ttgtgtgctttgatttctattttaatcaaccctctcaactgctgatcttt
caactatcatttaggagtatagaatgggcttccatagtaccattttctct
aagtattttgttcaactaagtagacttcttgactgtccttgtcccttatg
ttaaagttgttctgatggaggacattgctatttttggtagctttcacata
tcaataaggagctttggtgtaaNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNGATACGCAACATTGAGGAGTAGTTTAGAATGTTTGT
TTTTTCCTTCAATTTCAACCCATAGATGTTCGAGGGCTGGGTTGATGTTG
GTGATATCTTTGCGTATTTTGAGCTTGATGTCATCTTTGATGTATATGCC
GACACCGCCACCACGCCTGTTGTCTCGGTTATGATAGTAAAGTTTGTAAC
CTTCAATTTTAACATAATCAAGCAAGAAAGGATTGTCTTTTAGCCAGGTT
TCGGTGAGTGTTACCGCATCGAATTTGTATTTATTAACAAAGAGCACAAA
TTCATCGAACGTGGATACCATGGACTGTGTATTGATGTGAGCGATGCTAA
ACAAATGTCTAAAAGTCCATCGTATAATTCTACAGTTGATTACATATCTT
TTTAGTTTACTGATTCTTATTTAGATAACGAATCACGTGGATACCGTATG
CCCAATGGTCTCCCCTTGTGAATACAACGACTCTGGATGCTACTTTAAGG
TAAATTTTTCTTATGTTGAAGCTGCTATTTTAATTtccaaagaatgaaaa
aaattacaatcagCGTGAACTTTTTTTTGCGAATCGAAGATTATCGAAGA
TAAATTTTGCGAAGAGGGTCAAACTATGCGAAAATCGTAGACCGGAGTCA
TAGTCCGTTTATTACAGTAATACTAGTGTTATATGAAAATATGATAACAT
GATAGTTGTTCCGGGATAATATTAGTTTGTATGCAATTTATTCCTCTTAT
TAATTTCTGTCTGTCTCAATTAGTCGTTTAGTATACTAGACtacaaaaat
cccaaaaattgaCGCATGCGAAATTTAAACCATATAAGGTGTTCAGAGTT
TTTCGCTAAGTGTGGGAAATTTTACAAGAGTTCcgcaaaagtttcttttt
taaagtaGCTGTACCACAGCACTATCcggatttttgtcattttggcgcGT
TTGAGTGTTAAGGGAACGTTTGGATTGTTTTTAGTAAGTACGGTAAAGTA
TGGAGGTAAAAAAAGCCGATATATTATTTGAAAAgctaaaattctttgaa
ttgtNCGGTAAAGTATAGAGgttaaaaaactgttatattatTTAAAAAGC
TAAGATTCTTTAAATTGATTGGTTTCAGGGCACCAAATTACAACTGGACA
ATCATATGGCACAATCGGCCAACATGCATTTGTCTCTTGAAATGAAACGt
gagattttcaaaatgaaaaaagaattcgATCAAAAGTTGACAGCGAAAGA
TCTCGAAATtcaacaaatgaaaaatgaattcgTTGAACAGTTGAAAGAAA
GGGATAACGAAATCGGGAAATCCGAACTTGGTCAggtcttgaaaacaaaa
gaccAAATTATTAAAGCTTATGACAAAATCATTCAAGCACATGAAAATAC
CATTCAAGCTAAAAACGATACGATTCAAGCTAAAAACAGAACAATTCAAG
CACATGAAATTAGGATTGAAGCTAAAAACAGAACGATTCAAGTTAAAGAC
GATACGATTCAAGCACATGAACATAAGATTCGATCTAAAAACAAAACGAA
TCAAGCTCAAGACGATACGATTCAAGCATATGAAAATACGATTCAAGCTA
AAGACATAACGATTCAAGCACAAGAAATTACGATTCAAGCTAAAAACCGA
ACAATTCAAGCACATGAAATTACGATTCAAGCTAAAAACAGAACGATTCA
AGTTAAAGACAAAACGATTCAAGTATTGGCGGAGAAATTACAAGTCGccg
aagaaaaattgaaaaggNAACGATTCAAGTATTGGCGGAGAAATTACAAG
TCgccaaagaaaaattgaaaagatgaaGAGTTGCAAGAAGTTCAAATCCC
TTTATAAGAACTTAATAACGACTGCGACGAGTGCTctcctttttttattt
gaacaaAGAAGTTCAAACTACCATCATAGAACTTATTGTCTAAAAAATTG
AGGTTTTAAcggtaaaatatttttgcgatttagccaaattttgtaatatt
ttcNACTACCATCATAGAACTTATTGTCTAAAAAATTGAGGTTTTAACGG
TAAAATATTTTCGGTAAAACTATTCAAATTTCACGCACTTAATCTTCTAA
TTAATTAcccaaaatcataaataaataaaatgttgGCAATGGCAGCACTG
CCATCAAATCGTTGGAGAAAAAATTGCTGACGAAGTTGAAGACAACCGAT
AGAtctctttttgatttgaaagaagAATTTATGCTGACTAAGCAGGAGGT
TGAAAAAGTCAAACAACAGCATCAAAAAGATGAATTAAATTTGGATATCT
GCGCACCATCACTATTTAACTATATATGGACTatcgaaaatttcgaaaag
aaaattgacGCTGGTACGAAATGGACATATAGGACATATAGTTCAGCAAG
TTTTTTTGCTAAGCATGGTTATAAAGGATGTATTTCCTCCATGTTTCGCG
AGACCAATCAAGACAACATATACACTTATGTGTCAGTTTTCTTTAATAAT
GAGGTGGGACCTCATGACGATACTCTAGAATGGCCAATGCCTTGGAAATC
ATTGATTTTCACTTTGATATTTAATGGAGTTGAAATTGCTCAAACTGTGA
GAAGAAGTACAGATGAAGGAGGTAGATGGAAAGATTCATTTAAAAGACCA
TGTAATGTATGTGCTTACCGGCTTGGAAATCCGTCAGCATTTGAGCACGG
CTTATTCAAGGACATAACTATGAATGATAGTGTTACAATAAGATTTGAAA
TGAATTAATCTTCTAGTCATTAATTGGTGTAAATGTCGTTATATATTACG
TTTTCGtcgtctttttagagtaaaTGTATGAAGAGTTTATAAAGATTAGA
AATACGGGGgcgttggaaaattttcaaatttagttCGATAACCTCGAACA
AATACCAAAACAACGTCTAGtctgtccatatcttctgacgactggacgac
agatgaagattAGACAATAtttaataaattctaaaattatttcgtagata
attaattaataattctatgaataaattAAGTAAAGTGAATGAATATGGAA
TGCAATCATTAATGCttatatgaaaatttgaataatttctTGAAACTGTT
ACTAAGAACAATGAATcaacaattcgcaaaaaatgAATAACCTTcctgat
ttttcgattttatgcTCAAATTGCTGATCTAAGTGATAGCGTATTATAGG
gtgattcttgagaaaaacGTGTGTTTTTAGGGCGAAAGGTTCTACAGTGT
TATTATAAAGGAACTATCACTCTTACCTAAGTAGTTTCATTTTTCTAAGG
AATGCTGTGTCTTTAAATTTCAAGGCCATTGATTTGTCTATATTCTGttt
tttgatagatttttttgttcaagaggtattttgaaagtgatagtaTCGAG
ATATGAGCTTACTGTAGCAAGCTATAGTTTCGGAGAGGGAAGAGAAAcgg
aaatttctttttaatctgATCCTTTAATTATTTGTGAAAAGTTCGATCTT
GATCgctgaaaattagatttttaaataatatggcAGCTTGTAAACCAGAA
GAGTATGGTTTTGATGTGACGTTCATCTGGGAAGACGAAAAATCTGAAGT
ATCTGAAACAACAGAAGAAGATTCTGTACAGAACGCCAAAGAAATCAATA
GAGACGATATCACTTGTGCAATATGTCTTTTGGTTTTGCGAGAACCAGTA
CAAGCCGTGAAATGTGGGCATcgattttgtgaaaaatgtaTTGGGGAATT
TCATCTTCAGAAGTAAGTGTGAACAGTAGTAAGTTCACGTCgaaattttc
tatatttttgttgGTCGTCATTTTCTTGTGTTCTATAAAAAGTTTTCGTT
AAGCAAAGAATCTACTACTCAAATTAATTGCATTGGAGAATCTTTTATGT
TAATCATTTTATTCTAGTCCGGGGAAATGCCCCAAAGATTGGCAAGAGAT
TCAAGTTTTTCCAGATgtgggaaaaaaaagagaaatactCAGTTTGAAAA
TTCGATGTCCGAATTTCGTTGATGGATGTACGTGGCAAAATGAGCTCAGA
GAGAAAGAGGTTTGTAGGCGTTATTTCATTCGATATCATCTGTACGCAGA
AAGAAGAAGTTTTCAAAAGTGGAGGGATAGTACTTTGAATCTTTCTTTCC
AAATTCTAATTCTGGGATCTGGCACTGTGTTAAAATCCTAAAGACCCTTC
ACTTTCCGCAAATTTTTACTAAATTGGATACTTAAGCTATGCTCTCATTA
GGGCCAATTTATGAAGTGAAACCATATCACCTTGGAGGGAGGGGGGAGGA
ATCTACTTGATGGTATTTATAATGATTTTGATTCAAAGGGGAAGAGCCTA
GGGGTAGAGGAGGTTGATCTATACCTAGTAGTAAACCCCTTCCGTACTTA
AGCTTTAGGCCAATTTTCCTATTTAGGGTCGATTTCTTTTGCGATAGATA
ATAACAATCCTTAATCATTGTTTTAGGTTCACCTGAAAACTTGCGGTTTT
GTGACCGTTCCTTGTGAATTGGATTGTGGAGAATTCGTCCTCCGTAAAAA
CGTAAGAACAATTTGTTATCTTTTGTAAGATATGTGAGAGGCCtggaaaa
cacgagttaaaggACTTTAAAAAACCTCGGGTCATAACTCTGGTTTTCTT
TACCCGGGTTTTTCAGACCTCGATATGTGAATACAAACCATGAAAACACT
CGGGATAACTTTTTGTGAGGCCCTGAAAACCGGAGTTCGGCAAACCCTAG
TTACCTATTTTCATAACTTGagagaaatgacgtcattttagaAGATAACT
TGATTTATGATAATAACTCGATTTGTTTGTGGTTACCTTAATCGTTCGAG
TTAGTTAACTCGGTTGTTACGAAAATATGAgttatgaaaatttgttttcc
gGAATCTTTTAACCCAGTCTTTTTGGTGTATGTTTTTTTGAGTTTGTTAA
CTCGGATTTTCAAGAGGCCCGAAAGAGCTGATGTTGAAAAACTCGAAATA
TCTTACTAAGAGGGAGTTTTAGTACGAATCTATAAAGGTGACCTCTTATG
CAAATGAAACATTTGCTTCAAAAACGACAGTGGAAATCTCATCTTAtgat
tctcaacttcagttgagctaaaAAAAaggttatgacgtcataaaccgGGT
TTTCTTAACTTGGGTTTTTCAGGCCTTGATATGTGAATACAAACCATGAA
AACTTTCGGGATAACTTTTTGTGAGGCCCTCAAAACCCaagttataaaaa
ttaaaaattataaaaattgttAGAACAACCCAAGTTAGAAAAGCCCGAGT
TTGGCAAACCCTAGTTACctatttgtgacgtcataacttgAGAGGTATGA
CGTCATTTTAGAAGATTTATAATAATTCGATTTTTTGTGGTTACCGTTAT
CGttcgagttaattaactcggtTGATTATGATGAACCTTAATTTTTCTAG
TTagcaaacttttatttttaaggcGCCCCTAAATTTTTCGTATTTTAGAG
GTGTACcataaaaaatcgagttttttaCTGTATGATTCTTTTTTCGAGTT
ACTTGACTCGGATTTTTAAAATGCCCGAAAGACCCGAGGTTGAAAAACTC
GAAATATCTTACTAAGAGGGAATTTTAGTACAAATCTGTAAAGGTGAacc
cttacgcaaatcgaacatTTACTTCAAAACGACAACAGTGGAAATAACTT
TGTAATTCAAGAGATTTTTTTGGATTAAATCCTATCTTATAACATGTTAT
AATTCATCTGCAATTGTAAGACATATCATTTTAGTTTACAGATTCTTCTT
TAGATAACAAATCATGTGGATACCGTATGTCCAATGGTCTCCTCTTGTGA
ATACAAAGACTCAGGATGTTACTTTAAGGTAAATTTTTCTTATGTTGAAG
CTGAAGTGCTAgctttattttgtcttttttcaaaGTAGCTGTACCGCAGC
ACTATCCGAATTTTTGTCATCTTGGCGCGTTTGAGGCTTAAGGAACGTTT
GGATTGTTTAAAGTAAGTACGGTAAAGTATAGAGGttaaaaaaactgtta
tattatTTGAAAAGCTAAGAGTCTCTAAATTGTTTGGTTTCAGGGCACAA
AGTTACAACTGGATAATCATATGGCACAATCGGCCAACATGCATTTGTCT
CTTGAAATGAAAAGtgagattttcaaaatgaaaaaagaattcgATCAAAA
GTTAACAGCAAAAGGTCTTGAAGctcaacaaatgaaaaatgaatttgctG
AACAGTTGAAAATGAGGGACAACGAAATCGGAAAAGTCCGGTTGGATCTT
GATGGAGACTTGAAAGCAAAAGACAAAATGATTCAAGGATTAGCGGAGCG
GTTAAAAATTGCAGAAGAGAAATTGAAAGGGGTCGGCGAAATAGAAATCA
AAGTTCAGATGAACCAAACCGCCATCAAGTCcttggagaaaaaattgttg
ACGAAGTTGAAGACAACCGATAAAtctctttttgatttgaaagaagAATT
TATGCTGACTAAGCAGGAAgttgaaaaagtcaaagaacAGCATCAAAAAG
ACGACCTTTTTAAAGCATCGGGTAGAGGTTTAGCTGTAAAAGGGGAATTA
AATTTGGCTATCTGCGCACCATCACTATGTAACTATACATGGACTATCGA
AAATTTCAAAGAGAAATTTGACGCTGCTACGGAATGGAGAGAGTATAATT
CACCAAGTTTTTTTACTAAGCATGGTTATAAAGGATGTATTTCCTCTGGG
TTTCGCCAGaccaataaagacaaaaaaaaccCTTGTCTATCAGTTTACTT
TCAGAACAGAGTGAGTCCTTATGACGTTACTTTAGAATGGCCAATGCCTT
GGAAATCATTGATTTTCACTTTAATCTTTAATGGAGTTGAAATTGCCCAA
ACTGTGAGAAGAAGTACAGATGCAGGAGGTAAATGGAAAGATTCATTTAA
AAGACCAGCTTTTACATGTTTCTGTGTGGGTAATCGGTCAGCCTTTGAGC
ACGGCTTATTCAAGAACATAACTATGTATGATAGTGTTGCAATAAGATTT
GAAATGAATTGATCTTATACTCAGTAAATGGTGTAAACTACATTTGAAAC
AAACTATCCATTTCCAAGAAATTGTATTTATGGGTGGAGCCTCGTGTCAG
TCAATCGAATTATTTATCGTATTTAATCAACTTTTCAATTCAAGACCTCC
ATTTAGACCAGAATGATCGATGGTAATTACTTTACCTTAAATTGACTTAA
CCTTTGGATATTTTGGACGTATTGCACTTTCGtcgtctttttagagtaaa
TGTATGAAGAGTTTATAAAAATTACtaaattcaaaaatcatttcgtaGAT
AACTAATAATTCTCGGGTACgtaatagccggggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030652XLOC_030652Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048151-exon-scaffold_141-1491911889:176610..176678TCONS_00048151-exon-scaffold_141-1491911889:176610..176678Clytia hemisphaericaexon
TCONS_00048151-exon-scaffold_141-1510915933:176610..176678TCONS_00048151-exon-scaffold_141-1510915933:176610..176678Clytia hemisphaericaexon
TCONS_00048151-exon-scaffold_141-1575043694:176610..176678TCONS_00048151-exon-scaffold_141-1575043694:176610..176678Clytia hemisphaericaexon
TCONS_00048151-exon-scaffold_141-1491911889:176962..177006TCONS_00048151-exon-scaffold_141-1491911889:176962..177006Clytia hemisphaericaexon
TCONS_00048151-exon-scaffold_141-1510915933:176962..177006TCONS_00048151-exon-scaffold_141-1510915933:176962..177006Clytia hemisphaericaexon
TCONS_00048151-exon-scaffold_141-1575043694:176962..177006TCONS_00048151-exon-scaffold_141-1575043694:176962..177006Clytia hemisphaericaexon
TCONS_00048151-exon-scaffold_141-1491911889:201748..202993TCONS_00048151-exon-scaffold_141-1491911889:201748..202993Clytia hemisphaericaexon
TCONS_00048151-exon-scaffold_141-1510915933:201748..202993TCONS_00048151-exon-scaffold_141-1510915933:201748..202993Clytia hemisphaericaexon
TCONS_00048151-exon-scaffold_141-1575043694:201748..202993TCONS_00048151-exon-scaffold_141-1575043694:201748..202993Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_141supercontigscaffold_141:176610..202993 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00284584	0.0700709	0.0264447	0.0822751	0.869697	0.805574	0.685388	0.728605	0.599723	0	0.331298	0.150286	0.57228	0.685792	0.238947	0.156782	0.267662	0	1.06293e-09	0.234253	0.141256	0	0.214194	0.440335	0.01014	2.21298	0.0125469	0.444902	0.0952559	0.166905
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048151 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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