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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048133 ID=TCONS_00048133|Name=TCONS_00048133|organism=Clytia hemisphaerica|type=transcript|length=1138bp
GATTTTTATGCTTGAAACTAGAAGCAAATTTTTGTTATTAGTAAAGAATT
TATGTTACATTTGAGGTGAAGTTTTTTCCACGGTCAGGCCAATGTACTAT
TAGTAAGTATATATTTTCCCTCATACTTTAGCTTTGTTATTTTGGACTTT
AGCCTAGATTTCTTGATGCCTTGTCAGCaaatttttaggcctttttaaaa
catttttctaagCAAATTTATTGTACTTATTTTTAGCCTGCATATTGAGT
CAAACATCAAACGTGAATTTTTTACAGTAAAAATACTAGTGCACCTCCCA
TATGTTAATCCGACGGTATGCATCTGCTTAGTGGGCGGTTCAAGGTGACG
GAGCACTACCGCCTGTACACTGTTGAGTCGAGACTTGTGCATAAAAACTT
AATCGTTACTGAAATTAACCGTACAATCCACGAAATGTTATAGCCCGCAT
TAAATGAGCCTCATGCTGAAACACAAGAGATCGAGAAGGCCTTTGAAGAA
TTAGACAGGCAATATCGCAGCTCCGTAGCTGTACACGAAGAATGTCAGGG
GTTATTCAGACCAGATGAAAAGGAAGGAGAACCGGTTAGCAAACAGTATA
GTCGAAAGAATATGTCAATTGAAGACCAATTACCATCAAACAAAGGCAGA
GATGAAAAGGACAGAAAGTCAAGTTCAGAAAGATGAAGAAAAGTCAACTC
GCAGAAGTTCTGGAAAAAGATCAAAGTCGGATCTTCAAAGTCGTCTAGAA
ATTCCTGGATGATACCAAGAACGTCGGCAAAGTCAAGTTGGACGCTGAGT
TGAAAGCTAACAGATTGAGAGAGGGATCAGAAATGAAAGCAAAACAGTTG
ATCAGAGATGCAGAAATTCAAGAATTGCAACTTGAGAATGAGTACCAGAT
CGCAATGGCGACTGACTGACGATTTTGGTGAAGTGTCGAGTAACTTCATC
AGCTACGGATGTTCGTCGTCTTCTACAAATATTGGTCTTTATGTTGTGCC
TGTAAAACTGCGTCATgtcaatcatcaaaacaaagtccACACGCGTGCTT
TGTTTGATCCAGGAAGTAACGGATCCTTCATCAGTGACGAGATTTCAAGG
TCATTTGGTTCTTCAGAAATTCACACATCTCTCACTGT Run BLAST on NCBI transcript from alignment at scaffold_140:132726..133863 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048133 ID=TCONS_00048133|Name=TCONS_00048133|organism=Clytia hemisphaerica|type=transcript|length=1138bp|location=Sequence derived from alignment at scaffold_140:132726..133863 (Clytia hemisphaerica)
ACAGTGAGAGATGTGTGAATTTCTGAAGAACCAAATGACCTTGAAATCTC
GTCACTGATGAAGGATCCGTTACTTCCTGGATCAAACAAAGCACGCGTGT
ggactttgttttgatgattgacATGACGCAGTTTTACAGGCACAACATAA
AGACCAATATTTGTAGAAGACGACGAACATCCGTAGCTGATGAAGTTACT
CGACACTTCACCAAAATCGTCAGTCAGTCGCCATTGCGATCTGGTACTCA
TTCTCAAGTTGCAATTCTTGAATTTCTGCATCTCTGATCAACTGTTTTGC
TTTCATTTCTGATCCCTCTCTCAATCTGTTAGCTTTCAACTCAGCGTCCA
ACTTGACTTTGCCGACGTTCTTGGTATCATCCAGGAATTTCTAGACGACT
TTGAAGATCCGACTTTGATCTTTTTCCAGAACTTCTGCGAGTTGACTTTT
CTTCATCTTTCTGAACTTGACTTTCTGTCCTTTTCATCTCTGCCTTTGTT
TGATGGTAATTGGTCTTCAATTGACATATTCTTTCGACTATACTGTTTGC
TAACCGGTTCTCCTTCCTTTTCATCTGGTCTGAATAACCCCTGACATTCT
TCGTGTACAGCTACGGAGCTGCGATATTGCCTGTCTAATTCTTCAAAGGC
CTTCTCGATCTCTTGTGTTTCAGCATGAGGCTCATTTAATGCGGGCTATA
ACATTTCGTGGATTGTACGGTTAATTTCAGTAACGATTAAGTTTTTATGC
ACAAGTCTCGACTCAACAGTGTACAGGCGGTAGTGCTCCGTCACCTTGAA
CCGCCCACTAAGCAGATGCATACCGTCGGATTAACATATGGGAGGTGCAC
TAGTATTTTTACTGTAAAAAATTCACGTTTGATGTTTGACTCAATATGCA
GGCTAAAAATAAGTACAATAAATTTGcttagaaaaatgttttaaaaaggc
ctaaaaatttGCTGACAAGGCATCAAGAAATCTAGGCTAAAGTCCAAAAT
AACAAAGCTAAAGTATGAGGGAAAATATATACTTACTAATAGTACATTGG
CCTGACCGTGGAAAAAACTTCACCTCAAATGTAACATAAATTCTTTACTA
ATAACAAAAATTTGCTTCTAGTTTCAAGCATAAAAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048133-exon-scaffold_140-1491911889:132726..133863 | TCONS_00048133-exon-scaffold_140-1491911889:132726..133863 | Clytia hemisphaerica | exon |
| TCONS_00048133-exon-scaffold_140-1510915933:132726..133863 | TCONS_00048133-exon-scaffold_140-1510915933:132726..133863 | Clytia hemisphaerica | exon |
| TCONS_00048133-exon-scaffold_140-1575043694:132726..133863 | TCONS_00048133-exon-scaffold_140-1575043694:132726..133863 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_140 | supercontig | scaffold_140:132726..133863 . |
Blast
The following BLAST results are available for this feature:
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