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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048096 ID=TCONS_00048096|Name=TCONS_00048096|organism=Clytia hemisphaerica|type=transcript|length=1068bp
atttctcatttttctctgtGTGGTACCATTCCTATCAAGTTCATAGAtcc
caaaaattagaaaattttgaaatataaagatCTGTTGAGTTTTTATGGGT
GTTTTTTGCACTGCATTGTTTCTTTGTTGAATCAGGACAAAGACAGACAA
ATTGGGTAagggtattttatttatttactttggaAAAGGATTATTCTCCC
TATTATGACAACTAGTCCGTTAGtcacaaaaatgtaaaatgCACACACAA
AGAAAGGATTGACTATTTTACATATATCTATGGGTGAAATGGGTAAATAT
AgtcaaaatagctttaataagaacaaaatacatGGTTTTTTAAGCGAGTG
CCGTCTATTATATTCTCCGAACTCtgaattttaaatctatttcgtgacta
acggacaattGCCATGTTTACTAACAGAAAACAACTTTTAGTGGAAAAAT
ACTTCATCTTTGGTAAGTTTAGCCTCAATTTGTTTGCAATAAGGTGTTAG
AAACCaagcattttgaaaaagtgatctTATGAAAATTTCATATCAGGTAG
GATGattttcgtgactaacggacacttCTTGATGAGCCTCTTGTGAGCTA
CCCACTCAACCTTTaatgctaaaattttgcacttaTTTTATGGTCATAGT
ACTTCtgtttttaagacaaaaattaaagaaacatGCAGCTTCCCTTggct
ttcattggaacttttcttATTATCAATGTGACTAACGGACAGTCGGGTAG
GCATGCATAACAacagccagaaaaaaaacaaataggaGTTAAGCAAAGCA
GATTTTGATTATTGATATGTTTTCTATAATGGTTGTCAGTACTCTATCAC
AGATTTGTGTACTGATACAATCatatttggatgaaaaaagtttctggcaa
agttcttggttttttcatgaacatataaacgactggacatatATCTTtaa
ttgtctctttgaagcgagcttcgttgccgcctgtatttcaaaattgctat
aaaaaatccgacaatattccgtcgtaattttatttctttgaattgtttag
gtaaaatgattgatagag Run BLAST on NCBI transcript from alignment at scaffold_14:674384..675451 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048096 ID=TCONS_00048096|Name=TCONS_00048096|organism=Clytia hemisphaerica|type=transcript|length=1068bp|location=Sequence derived from alignment at scaffold_14:674384..675451 (Clytia hemisphaerica)
ctctatcaatcattttacctaaacaattcaaagaaataaaattacgacgg
aatattgtcggattttttatagcaattttgaaatacaggcggcaacgaag
ctcgcttcaaagagacaattaAAGATatatgtccagtcgtttatatgttc
atgaaaaaaccaagaactttgccagaaacttttttcatccaaatatGATT
GTATCAGTACACAAATCTGTGATAGAGTACTGACAACCATTATAGAAAAC
ATATCAATAATCAAAATCTGCTTTGCTTAACtcctatttgttttttttct
ggctgtTGTTATGCATGCCTACCCGACTGTCCGTTAGTCACATTGATAAT
aagaaaagttccaatgaaagccAAGGGAAGCTGCatgtttctttaatttt
tgtcttaaaaacaGAAGTACTATGACCATAAAAtaagtgcaaaattttag
cattAAAGGTTGAGTGGGTAGCTCACAAGAGGCTCATCAAGaagtgtccg
ttagtcacgaaaatCATCCTACCTGATATGAAATTTTCATAagatcactt
tttcaaaatgcttGGTTTCTAACACCTTATTGCAAACAAATTGAGGCTAA
ACTTACCAAAGATGAAGTATTTTTCCACTAAAAGTTGTTTTCTGTTAGTA
AACATGGCaattgtccgttagtcacgaaatagatttaaaattcaGAGTTC
GGAGAATATAATAGACGGCACTCGCTTAAAAAACCatgtattttgttctt
attaaagctattttgacTATATTTACCCATTTCACCCATAGATATATGTA
AAATAGTCAATCCTTTCTTTGTGTGTGcattttacatttttgtgaCTAAC
GGACTAGTTGTCATAATAGGGAGAATAATCCTTTtccaaagtaaataaat
aaaataccctTACCCAATTTGTCTGTCTTTGTCCTGATTCAACAAAGAAA
CAATGCAGTGCAAAAAACACCCATAAAAACTCAACAGatctttatatttc
aaaattttctaatttttgggaTCTATGAACTTGATAGGAATGGTACCACa
cagagaaaaatgagaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048096-exon-scaffold_14-1491911889:674384..675451 | TCONS_00048096-exon-scaffold_14-1491911889:674384..675451 | Clytia hemisphaerica | exon |
| TCONS_00048096-exon-scaffold_14-1510915933:674384..675451 | TCONS_00048096-exon-scaffold_14-1510915933:674384..675451 | Clytia hemisphaerica | exon |
| TCONS_00048096-exon-scaffold_14-1575043694:674384..675451 | TCONS_00048096-exon-scaffold_14-1575043694:674384..675451 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:674384..675451 . |
Blast
The following BLAST results are available for this feature:
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