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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048094 ID=TCONS_00048094|Name=TCONS_00048094|organism=Clytia hemisphaerica|type=transcript|length=1273bp
ATTAAAAGGGGACTATTAAAAAGGGACTTTTTTAATTCAAGATGTTTGAT
AAACGGTGACGATGAGAGTTATTTAATATGTGTTTTGAGTAAAATAGAAG
CCCATTTCGAATGCTCTGATCTTACTGGATATGAAATTCTGTATTTAACA
GACCAGTGAGTTATATTCAAATGTATCAACTGCCTGTGTGGaccaaagtt
ttcaaaagtttcaacgGGGAGTGAATACGGAAATACCGGCAATTTTTTCC
CGAAACACCGGAATACCGAACACAATTAACTCCAAATaccgtcagcaaaa
atttttatatttcattttggGGCCTTGTTCGTGAGGAAAGGTATTTCAAC
TGCAAGAATCGTTGATAAATAAGAAGTAAGGGTTTACCCtgttaaaatct
tcattttaaacTGTTATTTTCTCAGTATATCAGACGAACGATCTAATTTC
CATGTGCAAATAGCATAGAAGAAGTGAAGTTTAATTACTGACAAAGTGCA
ACCATGGTTTGTGCCTCGGTTTGTGCCGACCGAAGAAAGTTTTAAGACTT
TCTTATTTGGCTAAAAGCACTATGTTTTAGAATGGTTTTACTATTGTAAC
AAGCACctcaaaaagctctttttatggAATTCTTTAGTTCTATTTTGAGA
ATTAGGCATTACCTTCATATGAGAAAAGGGCAATAGCTTTCTTGAACAAG
ATTGGGGAGGCAAATCAAAAAAAGACAACGACTGCAAAATTTGTGCTAAT
TTACAGGTCCGCTATTGTGGCTAAAAGTGTGTTTCGTGATGTGAAATTAG
GGAAAGGAACTCCAGATTGGTTTAGTCCGTCCATTTGCCTTTGGATCAAA
TTCTACTCtaataaagagaaaaaacatTTGTAAGTGCTTGAGAGAAGGca
gcacttttttgcaaaattcatTATTTAAAGGATAGTGGATGGACTATAAC
CGAAAAAAAGTTACCACTAGACTGACTAGAGGTGGAGCTGTTTCTGACCC
CATGTCACCATGCTACTGTTAGGGAGCTAAAGTATCAAAACTGTCAAAAC
TGTTCGTTTTAGAAAACATGGGTGTAGTTGtctaaaatttaagaaagtTT
AGCGCCACAGGTGATTTTTGGAAGTGTCTTTATGAAAAAAACAGTTcgga
aagattttaaaattacgagtaaataccgaaatactgaagcatttttaggc
aatttaccGTCACCGGCAGCATTTCAAATACCGGAGTACCGTacttattt
tcttaaaatccCTAAATACTAGA Run BLAST on NCBI transcript from alignment at scaffold_14:593811..595083 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048094 ID=TCONS_00048094|Name=TCONS_00048094|organism=Clytia hemisphaerica|type=transcript|length=1273bp|location=Sequence derived from alignment at scaffold_14:593811..595083 (Clytia hemisphaerica)
TCTAGTATTTAGggattttaagaaaataagtACGGTACTCCGGTATTTGA
AATGCTGCCGGTGACggtaaattgcctaaaaatgcttcagtatttcggta
tttactcgtaattttaaaatctttccgAACTGTTTTTTTCATAAAGACAC
TTCCAAAAATCACCTGTGGCGCTAAactttcttaaattttagaCAACTAC
ACCCATGTTTTCTAAAACGAACAGTTTTGACAGTTTTGATACTTTAGCTC
CCTAACAGTAGCATGGTGACATGGGGTCAGAAACAGCTCCACCTCTAGTC
AGTCTAGTGGTAACTTTTTTTCGGTTATAGTCCATCCACTATCCTTTAAA
TAatgaattttgcaaaaaagtgctgCCTTCTCTCAAGCACTTACAAatgt
tttttctctttattaGAGTAGAATTTGATCCAAAGGCAAATGGACGGACT
AAACCAATCTGGAGTTCCTTTCCCTAATTTCACATCACGAAACACACTTT
TAGCCACAATAGCGGACCTGTAAATTAGCACAAATTTTGCAGTCGTTGTC
TTTTTTTGATTTGCCTCCCCAATCTTGTTCAAGAAAGCTATTGCCCTTTT
CTCATATGAAGGTAATGCCTAATTCTCAAAATAGAACTAAAGAATTccat
aaaaagagctttttgagGTGCTTGTTACAATAGTAAAACCATTCTAAAAC
ATAGTGCTTTTAGCCAAATAAGAAAGTCTTAAAACTTTCTTCGGTCGGCA
CAAACCGAGGCACAAACCATGGTTGCACTTTGTCAGTAATTAAACTTCAC
TTCTTCTATGCTATTTGCACATGGAAATTAGATCGTTCGTCTGATATACT
GAGAAAATAACAgtttaaaatgaagattttaacaGGGTAAACCCTTACTT
CTTATTTATCAACGATTCTTGCAGTTGAAATACCTTTCCTCACGAACAAG
GCCccaaaatgaaatataaaaatttttgctgacggtATTTGGAGTTAATT
GTGTTCGGTATTCCGGTGTTTCGGGAAAAAATTGCCGGTATTTCCGTATT
CACTCCCcgttgaaacttttgaaaactttggtCCACACAGGCAGTTGATA
CATTTGAATATAACTCACTGGTCTGTTAAATACAGAATTTCATATCCAGT
AAGATCAGAGCATTCGAAATGGGCTTCTATTTTACTCAAAACACATATTA
AATAACTCTCATCGTCACCGTTTATCAAACATCTTGAATTAAAAAAGTCC
CTTTTTAATAGTCCCCTTTTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048094-exon-scaffold_14-1491911889:593811..595083 | TCONS_00048094-exon-scaffold_14-1491911889:593811..595083 | Clytia hemisphaerica | exon |
| TCONS_00048094-exon-scaffold_14-1510915933:593811..595083 | TCONS_00048094-exon-scaffold_14-1510915933:593811..595083 | Clytia hemisphaerica | exon |
| TCONS_00048094-exon-scaffold_14-1575043694:593811..595083 | TCONS_00048094-exon-scaffold_14-1575043694:593811..595083 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:593811..595083 . |
Blast
The following BLAST results are available for this feature:
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