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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048067 ID=TCONS_00048067|Name=TCONS_00048067|organism=Clytia hemisphaerica|type=transcript|length=968bp
tgtaCAGGAAGCGATAACGGTATGCACCAATCTCCTTTATTCAGGAGATT
ACCCTAAACCACCTGTTAGCAAAGAAACTTTCACTGAACTTTTGGAGGTG
TGTACATCAaacgttttgattttgacttgtAATGGCTACTATCGTCAAAC
AGATGGCTTAGCCATGGGAAGTCCTCCGGCACCCTTATAAGCTAACGGTT
GGCTAAATCAATACGAAGAGCGACTAAAAGGTGATGCAAATATCTATGAT
AGGTATATGGACGATATTCTTAGAGACATTCATGTTGATGACATTGTATC
TGAATTGAAGGAAGTCAACGAGTTGCAGGCTCCTAACTTGAAGTTCACGA
TAGAAAGAGAGAAGGATGGCAAAATACCGTTTTTAGATATGCTCCTCATT
CGCGAAGGATCGACGATATCTTCAACTTGGTACACTAAGCCCACTGACAC
TGGCCTTATGATGAATTGCCATGCTTTGTCACCCCTTAGGTAAAAACGAT
CAGCGGTTACGAGTATGATACACAGAATTTTTCGATCTTGTAGTACACTA
GAACTCCTTGATGAAAGTCTTGTAAAAGCTCGTAGAATCTTGAAAATAAT
CAATACCCATCAAAGTTCTATGAGCCAATAATTCGAGAAACGCTTGAAAA
GTTACGTAATCCATCACAAGAAAACGCTAATGCCGAAGAAGAGGTTGAGA
ATAACATAATTGAAGATACCAAAATCTTCATTGAATATCGGGGAAGAGAG
TCCGACGTCTTTTATCGTTCATTGAGAAATGCAGGTGCACCTGTAAAAGT
AGTGTTTAGACTCCGTAAAATCAAAACCATTTTGCCATCGTTGAAAACCG
AAATCGAGAAATGTTACAAAAGCGGTGTAGTTTACCAAATTCTATGTCCA
TGTTGTAAAGCATGCTATGTCGGGCAAACAAACCGACACACTCTGCAGCG
CACTAAAGAACACCAACG Run BLAST on NCBI transcript from alignment at scaffold_14:164353..165320 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048067 ID=TCONS_00048067|Name=TCONS_00048067|organism=Clytia hemisphaerica|type=transcript|length=968bp|location=Sequence derived from alignment at scaffold_14:164353..165320 (Clytia hemisphaerica)
CGTTGGTGTTCTTTAGTGCGCTGCAGAGTGTGTCGGTTTGTTTGCCCGAC
ATAGCATGCTTTACAACATGGACATAGAATTTGGTAAACTACACCGCTTT
TGTAACATTTCTCGATTTCGGTTTTCAACGATGGCAAAATGGTTTTGATT
TTACGGAGTCTAAACACTACTTTTACAGGTGCACCTGCATTTCTCAATGA
ACGATAAAAGACGTCGGACTCTCTTCCCCGATATTCAATGAAGATTTTGG
TATCTTCAATTATGTTATTCTCAACCTCTTCTTCGGCATTAGCGTTTTCT
TGTGATGGATTACGTAACTTTTCAAGCGTTTCTCGAATTATTGGCTCATA
GAACTTTGATGGGTATTGATTATTTTCAAGATTCTACGAGCTTTTACAAG
ACTTTCATCAAGGAGTTCTAGTGTACTACAAGATCGAAAAATTCTGTGTA
TCATACTCGTAACCGCTGATCGTTTTTACCTAAGGGGTGACAAAGCATGG
CAATTCATCATAAGGCCAGTGTCAGTGGGCTTAGTGTACCAAGTTGAAGA
TATCGTCGATCCTTCGCGAATGAGGAGCATATCTAAAAACGGTATTTTGC
CATCCTTCTCTCTTTCTATCGTGAACTTCAAGTTAGGAGCCTGCAACTCG
TTGACTTCCTTCAATTCAGATACAATGTCATCAACATGAATGTCTCTAAG
AATATCGTCCATATACCTATCATAGATATTTGCATCACCTTTTAGTCGCT
CTTCGTATTGATTTAGCCAACCGTTAGCTTATAAGGGTGCCGGAGGACTT
CCCATGGCTAAGCCATCTGTTTGACGATAGTAGCCATTacaagtcaaaat
caaaacgttTGATGTACACACCTCCAAAAGTTCAGTGAAAGTTTCTTTGC
TAACAGGTGGTTTAGGGTAATCTCCTGAATAAAGGAGATTGGTGCATACC
GTTATCGCTTCCTGtaca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048067-exon-scaffold_14-1491911889:164353..165320 | TCONS_00048067-exon-scaffold_14-1491911889:164353..165320 | Clytia hemisphaerica | exon |
| TCONS_00048067-exon-scaffold_14-1510915933:164353..165320 | TCONS_00048067-exon-scaffold_14-1510915933:164353..165320 | Clytia hemisphaerica | exon |
| TCONS_00048067-exon-scaffold_14-1575043694:164353..165320 | TCONS_00048067-exon-scaffold_14-1575043694:164353..165320 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:164353..165320 . |
Blast
The following BLAST results are available for this feature:
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