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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047944 ID=TCONS_00047944|Name=TCONS_00047944|organism=Clytia hemisphaerica|type=transcript|length=1213bp
atttttatCAATCTCTCAAAAATTGTCTACAAATACTTCAATTACAAATA
ACAAAACCATATGCTTTGGCGATGGAAAAACTAGGAGCAGAAAAGAAAga
agtagaaaaaaaagaacgaaattcATTTTTCTATGAGGAATTAAATTTca
taatcaaaaaaataatatatgaaAAACAGACATGTTGGCAGAGAAGTTCC
ATGTCCACTTTTCTTTATCAAcataaattatttaataaaaatcttcattc
tttattcaaagaattcttttgaaaaacaaagggaTCTCACAATACGCCGA
TTGTATCGTCTTCAAATACCTTCTTAAAATATTCATCACTTGTACAATCT
CTCCTTCTCTTCTACAGCAGGTGGTTTTTCTGTTGTGATTCCACAATAAT
TTTCCCTTATTCATGCATCCATGGACCAGTTTGTTTTTTCCTACTCTATT
AAAAAAATCCTCccaaaataacaacaacaaattAGATCTAATTGATGATA
TGATAAAAGATATGGAATTCTTACAGAGCTTGGTTGGCTACATGTCGACA
TTAACATAACTAAAACCCTCCAAAGTGTTGGTGATTCATTCAACACCCTA
CTCGAAGTAAATCAGAAGCCTACGGGTTACcttaaaatttttcattcaag
CTGATTCAAGCAATATGATAACCTGAAGAGTCGTTTAAATAAAACTTTAG
TAAGAGGaagttttaatgaaattaatagAAAGCGACTTCCCGAGTGTGTT
TCATATAtttacaaaatgttaaaaagctaATAGTAATATACAAAGTAAGA
GTAGCAATCAAACATTCCCTTACGTTTGATTGTTGCAGTGGGTGAACGAC
TCCTTGATCGTTTGCGATCTCTATCTCGACCTCTATCGGAGCTGGAAAAA
GAAAGGAGGAAGTAATTGAAAAGTATTCGTCCACCAGAAATTGCACTGAG
GTTAATAATAAACCATATCTCATCACAGCTGTCATTCTGTGATTTGCAAG
GTAAAATTAGCGGAGAGAAAAAGGAATGAATGTTAGAAAATTGGCTTTCc
cagaaaaaaaacgtatactccctgttgaggaggtctgaCATATACAGACA
TATggaggaaaaagaacggataatgcaaaatctgccTAAGCTGAAACAAT
TCAAGAAAGCTGGCTTTAGCATtacagacgacttcaccatcaacgTAATA
AAAGTTATTAAAG Run BLAST on NCBI transcript from alignment at scaffold_139:45734..46946 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047944 ID=TCONS_00047944|Name=TCONS_00047944|organism=Clytia hemisphaerica|type=transcript|length=1213bp|location=Sequence derived from alignment at scaffold_139:45734..46946 (Clytia hemisphaerica)
CTTTAATAACTTTTATTAcgttgatggtgaagtcgtctgtaATGCTAAAG
CCAGCTTTCTTGAATTGTTTCAGCTTAggcagattttgcattatccgttc
tttttcctccATATGTCTGTATATGtcagacctcctcaacagggagtata
cgttttttttctggGAAAGCCAATTTTCTAACATTCATTCCTTTTTCTCT
CCGCTAATTTTACCTTGCAAATCACAGAATGACAGCTGTGATGAGATATG
GTTTATTATTAACCTCAGTGCAATTTCTGGTGGACGAATACTTTTCAATT
ACTTCCTCCTTTCTTTTTCCAGCTCCGATAGAGGTCGAGATAGAGATCGC
AAACGATCAAGGAGTCGTTCACCCACTGCAACAATCAAACGTAAGGGAAT
GTTTGATTGCTACTCTTACTTTGTATATTACTATtagctttttaacattt
tgtaaaTATATGAAACACACTCGGGAAGTCGCTTTctattaatttcatta
aaacttCCTCTTACTAAAGTTTTATTTAAACGACTCTTCAGGTTATCATA
TTGCTTGAATCAGcttgaatgaaaaattttaagGTAACCCGTAGGCTTCT
GATTTACTTCGAGTAGGGTGTTGAATGAATCACCAACACTTTGGAGGGTT
TTAGTTATGTTAATGTCGACATGTAGCCAACCAAGCTCTGTAAGAATTCC
ATATCTTTTATCATATCATCAATTAGATCTaatttgttgttgttattttg
gGAGGATTTTTTTAATAGAGTAGGAAAAAACAAACTGGTCCATGGATGCA
TGAATAAGGGAAAATTATTGTGGAATCACAACAGAAAAACCACCTGCTGT
AGAAGAGAAGGAGAGATTGTACAAGTGATGAATATTTTAAGAAGGTATTT
GAAGACGATACAATCGGCGTATTGTGAGAtccctttgtttttcaaaagaa
ttctttgaataaagaatgaagatttttattaaataatttatgTTGATAAA
GAAAAGTGGACATGGAACTTCTCTGCCAACATGTCTGTTTttcatatatt
atttttttgattatgAAATTTAATTCCTCATAGAAAAATgaatttcgttc
ttttttttctacttcTTTCTTTTCTGCTCCTAGTTTTTCCATCGCCAAAG
CATATGGTTTTGTTATTTGTAATTGAAGTATTTGTAGACAATTTTTGAGA
GATTGataaaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047944-exon-scaffold_139-1491911889:45734..46946 | TCONS_00047944-exon-scaffold_139-1491911889:45734..46946 | Clytia hemisphaerica | exon |
| TCONS_00047944-exon-scaffold_139-1510915933:45734..46946 | TCONS_00047944-exon-scaffold_139-1510915933:45734..46946 | Clytia hemisphaerica | exon |
| TCONS_00047944-exon-scaffold_139-1575043694:45734..46946 | TCONS_00047944-exon-scaffold_139-1575043694:45734..46946 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_139 | supercontig | scaffold_139:45734..46946 . |
Blast
The following BLAST results are available for this feature:
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