TCONS_00047902 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047902
Unique NameTCONS_00047902
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2227

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047902 ID=TCONS_00047902|Name=TCONS_00047902|organism=Clytia hemisphaerica|type=transcript|length=2227bp
GTGTAACGCTTGCTTGATGTAGAGATTTTGTTTCGTCGAAACATCAGGAA
ACAGTACAACACTCGAACTAGCCGAATAATGTCTTATAATATTCGAAGAC
ACACTCAAAGGGCTAGAAGAAGAACAAGAAGTCCCTCGATAGAAAAGTAT
AAGCCAATCAAAGTAGAGTATGGACGTGGTTATGACTTTGACCTTGTCAA
TGAAGAACAGAAAGTATCAGATTTGGAATGCACAATCTGCCATTTACTTT
TGCGTGATGCGCACTCAACACCGTGTCATCACGCTTTTTGTCACGGATGC
TTGGTGAAATGGAACAATGAACAACCAACCAGAAGAAGAATGTCGACACG
TTGTCCAAGTTGTAATGTACAATATGAtcctgataagatttcctTTAATG
GAGTGGTTGACAGGATGGTGAAAACAAGTATCGATGTCAAATGTCCACAA
CACGAGAAAGGATGTCAATGGCAAGGAAAAATCATTGACTATAAGgaTCA
CGAGGAAAAATGTGATTACGAGATGATACGGTGCAAGAACAAAGGATGCC
AAGAAAATGTAGCCAGACTCAAAATGAATTACCACGAGGGAAATTGTGGA
TACCGAAGAGTTGAATGTGACTTTTGTTGTTTGGAGATGTCAGCTCGTGA
AATCGAAAATCATCACGGAGAATGTCCTTTCATAAATGTGGAATGCCCCA
ATGATGAATGTCAACTCGAATATCTTCGACAAGAGATTCCCAAACATTTG
GCTGAAGAATGTTTGTACGAAAAAATTGCATGTGAATATTCTGATGTCGG
TTGCAACCAAAAAAATTTACACCACATTTATTTCTGGCAAGTTGGTTCAA
CGCAAAGACATGGAGGAGCATAACAAAATCAACCTTGCCAAGCACCAGAA
ACTGATGCTTCATGATTAcaaattgatgaaaatgaaagttgcCGAGGTCG
AACGATCCAACAAAGAATTGAGAGACGAACTCAAAAAAGCCAATGAGAAG
AAACCACAAAGTCAAAAACCAGTTCTTAAAAATAAGTTCAAATCGCTCTA
TGTTACGGAATCTGAAGATTATGTTACGGAATCTGAAGATTCCGATTCCG
ATTGATTCCATTCCAGTCTTAAAATTGGTTTTTATAGTAGGcggccaagc
ctggggttccgtgacatcttttactAGAATACAGCCGCTTGAAGTTCAAC
AACATACCGACTTCAGTACAATGAAGACAAGATTcgacgtcaaatcacag
tagagctgacagttagttggtattcctttgtgtgttttagtcagagagtt
gttgtaatacattttttgctcagaatttcatgctctatcagatggtacca
atcattttcgtttattttgacttttgaaaataagctatttctctACTCCT
CATTTTTTCCTTACAGTTtcgcctatggcgtcactatattggtcataaaa
agttttcccgggtcTAATCCGCGTCTttcctctcaaaaatatcttgtaat
atactgttcttttgaatagactgaaaatggctaggtcgtagaaaagattt
CACGGGACccaaggcttggccccctactattagGTAGAACATACTCAGAC
CTAAGTATCTATTAGCAAAAATAGAATTGCAGGAATAAACTGCAATCTAT
ACAAATTGATATTATTCCGTTACGATTATTGTATTACTTTAAAACTTAAT
TAAATCGTTAGCCAATCTGGAAAACCGTCTCATAAAATCTGCCCCTCTTT
GTTTCGAGTTGCTGAATAGCTTTCGAATTTCCTCTGCCCGACTTTAAGTG
CTTGAAGATCTGAGATATTAAAATTGACTCATTGAACATTTAAGAAAAGT
GAAACATACCTAAATTTTGAAAGAACATAGGTAAGTTACATTTGGAGAGG
TCAGTGCCTTAAAACTTTTGACATACAAAAATTTCCAGGCTGTCCATCAA
GAATAATAAAATCGATATTTCACTTCCTTAAAAGTATAATGTTCGAAATA
AATTATATTTACCGTAAGcggattaattttggcgtgggtttaatttggcg
aaaaatgttgtttttggagaaaaaaaaaggaattaatacagtagagtctc
cctTAACTCGAAACTCTATTAACAGAATGTCTCCCTAAATTAAATGTTCC
TTAGTTTATGTTTTGTTACTCGTtgtaagaaataaataaacaaaatactT
CATTAGTTGTTTAACACTATGTGTCCT
Run BLAST on NCBI

transcript from alignment at scaffold_139:651127..657317+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047902 ID=TCONS_00047902|Name=TCONS_00047902|organism=Clytia hemisphaerica|type=transcript|length=6191bp|location=Sequence derived from alignment at scaffold_139:651127..657317+ (Clytia hemisphaerica)
GTGTAACGCTTGCTTGATGTAGAGATTTTGTTTCGTCGAAACATCAGGAA
ACAGGTAAAATAATATATTCATAACTGAATATTTATTAGACATCAATAGT
CAATAAGTCTTGTACATTGAAGGAAAAAGATTAAATCAGTTGTTCCTGGT
CTTACAACTTTTCTTAATCGAATCTCCGTCAAGTTCGACAGACCATTTTG
GATATCAGACGtgcgataaaatgagatatGGTATAGCGATAGTCAATGGC
TATTACTATCACAGGAAGTTTGTTTAAAGTCAACGAGGATTGATTAATTC
TATATCACATATTTTTTAATACATCACATATTATGCTATTCTACTGTAGT
CAAAGGTGGATACCTTCTCTTTTGAACAACAGCGAGTGATTTTTAAATAT
TACCTTGTATTTTACAGTACAACACTCGAACTAGCCGAATAATGTCTTAT
AATATTCGAAGACACACTCAAAGGGCTAGAAGAAGAACAAGAAGTCCCTC
GATAGAAAAGTATAAGCCAATCAAAGTAGAGTATGGACGTGGTTATGACT
TTGACCTTGTCAATGAAGAACAGAAAGTATCAGATTTGGAATGCACAATC
TGCCATTTACTTTTGCGTGATGCGCACTCAACACCGTGTCATCACGCTTT
TTGTCACGGATGCTTGGTGAAATGGAACAATGAACAACCAACCAGAAGAA
GAATGTAAGCATAAAAAacgatacacgcttttttatatataaatatcttc
tataagaatatcagggtgaaaatttgccaaatcgtaagaataccctaaga
ataccctctagggtgaatttcaaagaatttgataagaatacagtcattat
gtatttggttaacagaaaaactgcttcctttgttagagataaaattgaaa
ctttgaggAGGAAATGTgattttaacccaaatgttcactcaaaagttcaa
aactctcaaattgatcatttctcatgtttgtaaaacaggcaagtctaaaa
aagtaagaatatgttaagaatatttcaccctcaattctggcaatttctta
agaatacttgaccctcgctcatccaaagtacactattcttataaaaaagc
gtgtattcttaTACCAGCAGAAAGCTCGTTCTTTGTAAAANaactattct
tataaaaaaagcgtgtattcttaTACCAGCAGAAAGCTCGTTCTTTGTAA
AAATCTAAGAGTAGCTTTATAAGATTTCCACAGAATGACTGGTAATCGTG
GACCAAAATTGGGCCTAAATGAAGAGGTAAGTTTCGTAAGTTGAGATTTT
TAGTGCCCCGTAtgtataaaaagtaaaatatgtTTGTAGAAACAACGCGA
GGGATGAAATTTTTGGGTACCTTTTCTCTGGTTaatcttaaaaaattaaa
acacgAAGAATCGGTCGCTGGGACGGGGACAGCTACCCGCTCTGCTGCTA
CTGCTTGTAAGAATAGAAGTCATTTATATTCGATGACATTCCTCTCGCGA
ATATATTTtctacaaacaaaaaatggttaTAAATTTTATTCCGATTGTTT
CATTTCAGGTCGACACGTTGTCCAAGTTGTAATGTACAATATGAtcctga
taaggtaggttttattattttatcattcataaaattttaacaagttctTT
TTTCATTGATCTTCATAACTAATATTCTCAAAATACTCACTACCAAGAGA
GCAttaaattctgagcaaaaaatgtattacaacaactctctgccTAATCC
gagtcctccctctcaaaatatcttgtaatatactgttctttggaatagac
tggaaatggctaggtcgtaaaaaagatgtcacgggaccccaggcttggcc
ccgtACTAATGGGCACAGACTTTTTAGGAAAAGATTTTGGATAAGccaat
aataattttttttatagatttcctTTAATGGAGTGGTTGACAGGATGGTG
AAAACAAGTATCGATGTCAAATGTCCACAACACGAGAAAGGATGTCAATG
GCAAGGAAAAATCATTGACTATAAGGTAATGGCTCGTCGTCACTCTgcga
aaatgatttttgaacatttttgttTAGATTCGTGGTATTTATACGGAAAC
AACCAAAATAGCCCGGGTGTTTGCCACAAATCTTATTGTTTATGTTCAAA
ATTCATGGCAAACATCTTTTTTGGAGCTATCATATAAAatattacatcat
gaatatcacgaataaGACTTGGTTAAAGTTTGCAGTGAGCCTTTTTTTAT
ACATTAGTGTGATCTTAAGTGGGGTCTACTGCTATTTACTACCCGTTTCG
AAAACAACGACTTGATTATCATGACTGGTAAAACATTCAGACACGTCTTA
GTACGGAAAAGACATTGAAgatctttttttaattattacGTTGAACGACA
TCCCCGCATCACACCTTCGTTGATTAAAGAAATTGGTGGAAGAAGTAGTG
TTTTACTGTATACTGTTTAATTTAtatataatttattattttaggaTCAC
GAGGAAAAATGTGATTACGAGATGATACGGTGCAAGAACAAAGGATGCCA
AGAAAATGTAGCCAGACTCAAAATGAATTACCACGAGGGAAATTGTGGAT
ACCGAAGAGTTGAATGTGACTTTTGTTGTTTGGAGATGTCAGCTCGTGAA
ATCGAAGTGAGCCTATTTGTGCGTGGGTCGATACTGGAACTAACCCAACC
CCATCAATGAGTTAGAATAACCGTCTACAATAAACCTGGGAGGGAGAAAT
CTTAATTGAACAGATTTTTCTGTCTACAAAAGGAAGAATAGCGACAATCC
CAGTCTCTTCGGAAAAATGCCAACATCTTGACGCATTTTTCGGACAACCG
ATATATCTTCTTTTTCATCTGATTTTATAGAATCATCACGGAGAATGTCC
TTTCATAAATGTGGAATGCCCCAATGATGAATGTCAACTCGAATATCTTC
GACAAGAGGTAAAAATCGATTCCAATTTTATGCTACTTGAGTTTGGTCTT
ACTTAGTTATAAGTAAAAAGAAGTATactcatctggtggctgtctatttt
cttttttatttgcgCTANTACTTAGTTATAAGTAAAAAGAAGTATactca
tctggtggctgtctattctcttttttatttgcgctagacctagGAGATca
aatgctgaggtggagcgccacaccaaCTCTCAGCTCCcaaccgcctagat
cagattaccttAGATTAAGCTACTCATTCGCTGAATCAGCGGTAACCGGG
GATCTAATCCACAGCCCTTTGATTGTAAGGCaaaatgctctaccgactga
gctaccagGTCGCGATACTTCTAGATTGgatgaatgaataaaaagaaggt
tacaaagaatttcttttctttctttattgtACAGATTCCCAAACATTTGG
CTGAAGAATGTTTGTACGAAAAAATTGCATGTGAATATTCTGATGTCGGT
TGCAACCAAAAAGTAAGTGCTTTATAGAGGTTTCATCCATGACGAGAGCT
TTTTAGAGGGAGGAGCGGGCGCGCGCGCGGAAAGACAAAGAAACAGAGAG
ACAAATAGTGTTAGGCGCACGCGTCCTTAATGACTGCAAAAAGTCATCTC
CTTTTAATCGCATACGTCATTTTATTTAAACgcacaaaacaattaaaaat
atttattcatttcttttgtatcaTTTATATCATTTATACCTTAGGGATTT
TTTCTAGCATTTCAAATTACATTCAGATTTTTTCGTATCagttcaatttt
ttcataatCATTTAAGTGTCTGTTGAGGCATCATATGAGGAAAATGTGAA
CTCATCtcaaaatcaaactttcaaagTTAACCTTCAAATTCAAGTCAAGT
CAACTTTCAacatcaaattttcaattttaatttattggACAGAATTTACA
CCACATTTATTTCTGGCAAGTTGGtaagaatttatttaatttattaacTT
AGATTTCTTTTATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTCATCTAGATtaaa
tcttgtcatttttttattcattcagtttGAACTCTATCATCAAAAGTTAC
GAACACTTGTGTCCATTCATTTTCTGTCCGGCTACAAATAGTCGTTCTAA
GATTATGACTGTCAACAGGTTAACGATAAAAAAAATCAGCGCAAATTTTT
GAAGCACAAGTAATTTTGAAAACCTTAACCAACGACGGTAGCTTATATTC
GTCAGTGTTGAGTTTTCATTCCTTTGACTAGAATAACACATAAATACTGA
ACATTGGTGCTCAGGTGCTCGGGAACGTTCTAAAAATACCAGAAAACGCT
CTTGACTACATAGAGATATTGAAAAATGACAATGGGTGCATAATCTGATC
GTTcctgaatgttcttaaatgctcAGCATCAATTTTCAAAGAACTTGTAC
AAAAAAGCGTCCCTGAGCTTTCATAGACTTTACCGTGATATGAAGCGCCT
ACGCTTGGTTTGGGCCGCAGATATAATAGAACTAGATCATAAATGTATAA
AATGAGTGTTCAGGAACGTTCTATGTAAGTAATGAATGCCCAAAAGAACG
TTCCATTTCATAACATATAAACACTTTGAGAGCTTTATCTTATTCTTGAA
TTTATCAGGTTCAACGCAAAGACATGGAGGAGCATAACAAAATCAACCTT
GCCAAGCACCAGAAACTGATGCTTCATGATTAcaaattgatgaaaatgaa
agttgcCGAGGTCGAACGATCCAACAAAGAATTGAGAGACGAACTCAAAA
AAGCCAATGAGAAGAAACCACAAAGTCAAAAACCAGTTCTTAAAAATAAG
TTCAAATCGCTCTATGTTACGGAATCTGAAGATTATGTTACGGAATCTGA
AGATTCCGATTCCGATTGATTCCATTCCAGTCTTAAAATTGGTTTTTATA
GTAGGcggccaagcctggggttccgtgacatcttttactAGAATACAGCC
GCTTGAAGTTCAACAACATACCGACTTCAGTACAATGAAGACAAGATTcg
acgtcaaatcacagtagagctgacagttagttggtattcctttgtgtgtt
ttagtcagagagttgttgtaatacattttttgctcagaatttcatgctct
atcagatggtaccaatcattttcgtttattttgacttttgaaaataagct
atttctctACTCCTCATTTTTTCCTTACAGTTtcgcctatggcgtcacta
tattggtcataaaaagttttcccgggtcTAATCCGCGTCTttcctctcaa
aaatatcttgtaatatactgttcttttgaatagactgaaaatggctaggt
cgtagaaaagatttCACGGGACccaaggcttggccccctactattagGTA
GAACATACTCAGACCTAAGTATCTATTAGCAAAAATAGAATTGCAGGAAT
AAACTGCAATCTATACAAATTGATATTATTCCGTTACGATTATTGTATTA
CTTTAAAACTTAATTAAATCGTTAGCCAATCTGGAAAACCGTCTCATAAA
ATCTGCCCCTCTTTGTTTCGAGTTGCTGAATAGCTTTCGAATTTCCTCTG
CCCGACTTTAAGTGCTTGAAGATCTGAGATATTAAAATTGACTCATTGAA
CATTTAAGAAAAGTGAAACATACCTAAATTTTGAAAGAACATAGGTAAGT
TACATTTGGAGAGGTCAGTGCCTTAAAACTTTTGACATACAAAAATTTCC
AGGCTGTCCATCAAGAATAATAAAATCGATATTTCACTTCCTTAAAAGTA
TAATGTTCGAAATAAATTATATTTACCGTAAGcggattaattttggcgtg
ggtttaatttggcgaaaaatgttgtttttggagaaaaaaaaaggaattaa
tacagtagagtctccctTAACTCGAAACTCTATTAACAGAATGTCTCCCT
AAATTAAATGTTCCTTAGTTTATGTTTTGTTACTCGTtgtaagaaataaa
taaacaaaatactTCATTAGTTGTTTAACACTATGTGTCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030480XLOC_030480Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047902-exon-scaffold_139-1491911889:651127..651180TCONS_00047902-exon-scaffold_139-1491911889:651127..651180Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1510915933:651127..651180TCONS_00047902-exon-scaffold_139-1510915933:651127..651180Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1575043694:651127..651180TCONS_00047902-exon-scaffold_139-1575043694:651127..651180Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1491911889:651544..651830TCONS_00047902-exon-scaffold_139-1491911889:651544..651830Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1510915933:651544..651830TCONS_00047902-exon-scaffold_139-1510915933:651544..651830Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1575043694:651544..651830TCONS_00047902-exon-scaffold_139-1575043694:651544..651830Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1491911889:652685..652730TCONS_00047902-exon-scaffold_139-1491911889:652685..652730Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1510915933:652685..652730TCONS_00047902-exon-scaffold_139-1510915933:652685..652730Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1575043694:652685..652730TCONS_00047902-exon-scaffold_139-1575043694:652685..652730Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1491911889:653044..653151TCONS_00047902-exon-scaffold_139-1491911889:653044..653151Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1510915933:653044..653151TCONS_00047902-exon-scaffold_139-1510915933:653044..653151Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1575043694:653044..653151TCONS_00047902-exon-scaffold_139-1575043694:653044..653151Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1491911889:653621..653782TCONS_00047902-exon-scaffold_139-1491911889:653621..653782Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1510915933:653621..653782TCONS_00047902-exon-scaffold_139-1510915933:653621..653782Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1575043694:653621..653782TCONS_00047902-exon-scaffold_139-1575043694:653621..653782Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1491911889:654007..654084TCONS_00047902-exon-scaffold_139-1491911889:654007..654084Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1510915933:654007..654084TCONS_00047902-exon-scaffold_139-1510915933:654007..654084Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1575043694:654007..654084TCONS_00047902-exon-scaffold_139-1575043694:654007..654084Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1491911889:654511..654588TCONS_00047902-exon-scaffold_139-1491911889:654511..654588Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1510915933:654511..654588TCONS_00047902-exon-scaffold_139-1510915933:654511..654588Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1575043694:654511..654588TCONS_00047902-exon-scaffold_139-1575043694:654511..654588Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1491911889:655019..655049TCONS_00047902-exon-scaffold_139-1491911889:655019..655049Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1510915933:655019..655049TCONS_00047902-exon-scaffold_139-1510915933:655019..655049Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1575043694:655019..655049TCONS_00047902-exon-scaffold_139-1575043694:655019..655049Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1491911889:655935..657317TCONS_00047902-exon-scaffold_139-1491911889:655935..657317Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1510915933:655935..657317TCONS_00047902-exon-scaffold_139-1510915933:655935..657317Clytia hemisphaericaexon
TCONS_00047902-exon-scaffold_139-1575043694:655935..657317TCONS_00047902-exon-scaffold_139-1575043694:655935..657317Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_139supercontigscaffold_139:651127..657317 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.565492	0.74097	0.701291	0.928819	3.14198	2.60221	4.2203	5.06645	3.58889	4.29209	3.13911	2.25024	1.83774	3.29194	0.0944116	0	0	0	0	0	0	0	0	0.234439	2.43611	0.523538	0	0	0	0
Blast
[Close]
BLAST of TCONS_00047902 vs. Swiss-Prot (Human)
Match: TRAF6 (TNF receptor-associated factor 6 OS=Homo sapiens GN=TRAF6 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.449e-20
Identity = 65/218 (29.82%), Postives = 106/218 (48.62%), Query Frame = 1 
Query:  163 VEYGRGYDFDLVNEEQKVSDLECTICHLLLRDAHSTPCHHAFCHGCLVKWNNEQPTRRRMSTRCPSCNVQYDPDKISFNGVVDRMVKTSIDVKCPQHEKGCQWQGKIIDYKDHEEKCDYEMIRCKNKGCQENVARLKMNYH-EGNCGYRRVECDFCCLEMSAREIENHHGECPFINVECPNDECQLEYLRQEIPKHLAEECLYEKIACEYSDVGCNQK 813
            +E  +GYD +   +    S  EC IC + LR+A  TPC H FC  C++K      + R    +CP  N     +++  +    R +  S+ VKCP   +GC  + ++   +DH+  C++ ++ C    CQ    +  +N H   +C  R+V CD C   M+  + E H   CP  NV C  + C    +R+++P H   +C    I C +S  GC++K
Sbjct:   50 MEEIQGYDVEF--DPPLESKYECPICLMALREAVQTPCGHRFCKACIIK------SIRDAGHKCPVDNEILLENQLFPDNFAKREI-LSLMVKCPN--EGCLHKMELRHLEDHQAHCEFALMDCPQ--CQRPFQKFHINIHILKDCPRRQVSCDNCAASMAFEDKEIHDQNCPLANVIC--EYCNTILIREQMPNHYDLDCPTAPIPCTFSTFGCHEK 252
The following BLAST results are available for this feature:
BLAST of TCONS_00047902 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRAF62.449e-2029.82TNF receptor-associated factor 6 OS=Homo sapiens G... [more]
back to top