TCONS_00047840 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047840
Unique NameTCONS_00047840
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1540

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047840 ID=TCONS_00047840|Name=TCONS_00047840|organism=Clytia hemisphaerica|type=transcript|length=1540bp
aaagaaaacaatgaaaagaagaaagaaaacaatgaaaagaagaaagaaaa
agacgCAAAGAAGAAAGAGAAAGAACAACAAAAGCTGGAAAAGGAAAAGG
AGAAGATTGATAAGGAAAAGGAGAAGATTGAAAAGGAAGAACTGATGTGG
AGGAAAGAGGAAGCTTTTATGCAAAATTCTGTACATTTTATACGCTCTCT
CAGCGATGGAGAAGGCTGTCATGATGCTGATCGCCATGATGAAGTTGATG
ATGACAGTATGCCAGAAGTTGACCACCATGATCATGTTGAAAATAATGAT
GGCAGCGACAATCCAATCGAATCAGTAAGTTCTGAAAGTGATGATGATAA
TTTGAAGGAAGTACACAGCATGCCATTTGATAGTCCACATAATAAATCTA
CTGCTAAATTGCCAAAACCAAAAACACCGTCCACGCCATTGGATAAGCAG
CACAAACCTGCAAAATCATCACTTTCCACACCATTGGATAACCAGTGCAA
ACCTGCAAAATCCTCACCATCCACACCATTGGATAAGCAACGCATACCTG
CAAAATCGTCACCATCCACACCATTGGGTAAGCAGCACAAACCTGCAAAA
TCATCACCATCCACACCATTGCATAAGCAGCACAAACCTGCAAAATCGTC
ACCGTCCACACCATTGGATAAGCAGCGCAATCCTGCAAAATCGTCACCGT
CCACACCATTAGATAAGCAGCACAAACCTGCAAAATCGTCACCGTCCACA
CAAGTGGATGGTAAGGGCAAACCTGCTAAAACTGATTTCCCAAGTCACAA
TGAATCTCCGAAGTCTTCCGCATCAGAAATATTGAGTCCAAGAAAGAGAT
TAATTGCCAGCCAAATGAAAGGTGCTGCAAAAAGCCCTTATTTTCAAAAG
CCAAAGAGCTGTTACTTTTGCACACTCAAAGAAAATAAGGCCAAAGAAAC
GAATGCCAAAATTGCTGAGTTGGAAGATGAAATCGCTCGCCTCAATAGAG
TCCTTGCAGGTGGAAACTATATCGAATCTCTTGGACGACCAAAGTCAGGC
CTGATTCCAAGCAAAATTGCCAAGAAATATCAGCTTGAGCAACTTGCCCC
TGGCTTTGATGTCTATGTGGACCAAGAGGAATTTCGAACAGCAGCAACTA
AAAGTAACGGTACCGGAGCAGTTTTGTTTTTGCTTAGCTGTTTTTACACA
CACAGCGAGTTGCTGGAGATGAATTTAACAGGGGAGAATGGGAAGAAACC
AGTGAACAAAGAAATACTAAAAGCAATGTATGCATATGCTCTGGACAAGG
GGGATTCCAAAGCAAAACTTGCGGTGGCGTTGCGCAACAAAATAGAGCAA
ATAAGAACCAGGCATCGCAAAGCTCCGAACCAAGTTGAGGGTGAAAATGC
ATTGACAAACAACAAATAGATTCATGAGGAGCAGTCAAGAAATGTGATTT
GCATATAAATGTGATaaaaaactaatacaTGAAATAaatgatataatttt
gtttgctgTGAAATTCAATGGTGGCAATAGTACAATGTGA
Run BLAST on NCBI

protein sequence of TCONS_00047840-protein

>TCONS_00047840-protein ID=TCONS_00047840-protein|Name=TCONS_00047840-protein|organism=Clytia hemisphaerica|type=polypeptide|length=472bp
KENNEKKKENNEKKKEKDAKKKEKEQQKLEKEKEKIDKEKEKIEKEELMW
RKEEAFMQNSVHFIRSLSDGEGCHDADRHDEVDDDSMPEVDHHDHVENND
GSDNPIESVSSESDDDNLKEVHSMPFDSPHNKSTAKLPKPKTPSTPLDKQ
HKPAKSSLSTPLDNQCKPAKSSPSTPLDKQRIPAKSSPSTPLGKQHKPAK
SSPSTPLHKQHKPAKSSPSTPLDKQRNPAKSSPSTPLDKQHKPAKSSPST
QVDGKGKPAKTDFPSHNESPKSSASEILSPRKRLIASQMKGAAKSPYFQK
PKSCYFCTLKENKAKETNAKIAELEDEIARLNRVLAGGNYIESLGRPKSG
LIPSKIAKKYQLEQLAPGFDVYVDQEEFRTAATKSNGTGAVLFLLSCFYT
HSELLEMNLTGENGKKPVNKEILKAMYAYALDKGDSKAKLAVALRNKIEQ
IRTRHRKAPNQVEGENALTNNK
Run BLAST on NCBI

transcript from alignment at scaffold_138:97427..107597-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047840 ID=TCONS_00047840|Name=TCONS_00047840|organism=Clytia hemisphaerica|type=transcript|length=10171bp|location=Sequence derived from alignment at scaffold_138:97427..107597- (Clytia hemisphaerica)
AAAGAAAACAATGAAAAGAAGAAAGAAAACAATGAAAAGAAGAAAGAAAA
AGACGCAAAGAAGAAAGAGAAAGAACAACAAAAGCTGGAAAAGGAAAAGG
AGAAGATTGATAAGGAAAAGGAGAAGATTGAAAAGGAAGAACTGATGTGG
AGGAAAGAGGAAGCTTTTATGCAAAATTCTGTACATTTTATACGCTCTCT
CAGCGATGGAGAAGGCTGTCATGATGCTGATCGCCATGATGAAGTTGATG
ATGACAGTATGCCAGAAGTTGACCACCATGATCATGTTGAAAATAATGAT
GGCAGCGACAATCCAATCGAATCAGTAAGTTCTGAAAGTGATGATGATAA
TTTGAAGGAAGTACACAGCATGCCATTTGATAGTCCACATAATAAATCTA
CTGCTAAATTGCCAAAACCAAAAACACCGTCCACGCCATTGGATAAGCAG
CACAAACCTGCAAAATCATCACTTTCCACACCATTGGATAACCAGTGCAA
ACCTGCAAAATCCTCACCATCCACACCATTGGATAAGCAACGCATACCTG
CAAAATCGTCACCATCCACACCATTGGGTAAGCAGCACAAACCTGCAAAA
TCATCACCATCCACACCATTGCATAAGCAGCACAAACCTGCAAAATCGTC
ACCGTCCACACCATTGGATAAGCAGCGCAATCCTGCAAAATCGTCACCGT
CCACACCATTAGATAAGCAGCACAAACCTGCAAAATCGTCACCGTCCACA
CAAGTGGATGGTAAGGGCAAACCTGCTAAAACTGATTTCCCAAGTCACAA
TGAATCTCCGAAGTCTTCCGCATCAGAAATATTGAGTCCAAGAAAGAGAT
TAATTGCCAGCCAAATGAAAGGTGCTGCAAAAAGCCCTTATTTTCAAAAG
CCAAAGAGCTGTTACTTTTGCACACTCAAAGAAAATAAGGCCAAAGAAAC
GAATGCCAAAATTGCTGAGTTGGAAGATGAAATCGCTCGCCTCAATAGAG
TCCTTGCAGGTGGAAACTATATCGGTATGTATACGCAAACTATGTTTCTT
GTTTAAGCCTTCTTTTTGGAAAATACTCTTTTGTGCCTTTTTTNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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CTATTGCTTAAAATTTTATAAAGTGTTTTGGTCTGCATTATTATGGAATG
TTCTTACATTTCCCGCCTTTTATAAAAACGGTTCACGATTGGTTGGTTTA
CTGGACCACAATGCAACGAAGGATTAGACCTTAGACCCTTGAAGAAAGCT
GAGTCGGGATTCTTGCAGCTTTTACAGCGTTTGAATGCAGGGTTGACCTA
AAGGGAGATTTTTATATAGTCGGAATTTCTCTGGAAAAATATTATCATGT
CGTTCGTAGTGATCAACTGGACCGACGGTGGTGTCAGTTACGAGTCGAGA
GGTAAATTGACTGCTGAAGATGGTTTCCTCACAGGGAAATCTGTTTCCAA
ACCCCAAAAGGACAAAGATGATTGGATTGGCATCATTGATAGTGTTTGGA
GTAAGTATATAGTCTAATTTGATTAATTATTGACACAAAGTATAGCTGGT
CTGTTCCAGTTATAGTTCATAAGGCTTCCTCTAATGATTGGATTGTTTAT
TTAAAGTGTCCATAGACGTACCGTGAGGTCTGGTAACTTTGCATCAATGG
AGACTTTGACATGCATAGCCCTCAAATGATTGACCTGGCTGGTTATTAAA
ATACACAGTTAAATTAACAAAAATAGTAGAATGGAGCTGCAAGCATAGCT
GTGCAGTTCATTTGTTTTGAAATTTTGCTTCTTGGGGATTGATGGCTATG
CAAAGTTTCCCTCGACTGATNAATGGAGCTGCAAGCATAGCTGTGCAGTT
CATTTGTTTTGAAATTTTGCTTCTTGGGGATTGATGGCTATGCAAAGTTT
CCCTCGACTGATGCAAGTTACCCGACTTCATGGTATAATTGAAAGTAAGG
GGTCACTCACATATCAATTCTTCCCACAACTAACGTCGAATTGTCGTTAA
TTAAAAAATATCCCACCTCTTAACGTCAAAGTTAAAAATTGTCAAAAATT
GATGTAACTCTACATTTTCCCCTTCATTATTGTTTTGTAGGCCATCTTTA
ATTTCGCTACGGCTTCGCTTAGTTTACGTTTATAAAATAACAGATACTCA
GTGTTGCAAAACTTTTCCGTCTGTAGACGGAAATCTATCCAGCTAAAATT
TAGAATTTGACTTTCCGACTCCAAACAGTANNNNNNNNNNNNNNNNNNNN
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TTGGTTGGAGGATATAACATATATGCAAACTTTGATATAATTTTAGAATC
TCTTGGACGACCAAAGTCAGGCCTGATTCCAAGCAAAATTGCCAAGAAAT
ATCAGGTGAGATTTTTTTGTCTTGTAAAATCAACAAATAACAAAATTTAC
TTTAAATTTGAAATTTCGCAAAATCTTTTGGGTTTAATTTTGTGCTTCAG
CAGTTTGAAAAATTTGGACGCTTTAATTTTGCAAATGAGTCTGACTGCCT
GTGACTGCTGAGAATATCAATTTTTGGGCATAGAGAGTTTTGACTCTTCT
TAATCCAAAATGCTTTGTCAAAAAATTTTGTGGAGAATTAATAGAGTCAG
CAAATATCTCGCACATCTTCGTAAGTTTTAATTTGACGCATAATAGGCAA
ATAATAGGTTTCTTTCAGTTTCTTTAAGAGAGTTATTATTTATTTTAAGC
TTGAGCAACTTGCCCCTGGCTTTGATGTCTATGTGGACCAAGAGGAATTT
CGAACAGCAGCAACTAAAAGTAACGGTACCGGAGCAGTTTTGTTTTTGCT
TAGCTGTTTTTACACACACAGCGAGTTGCTGGAGATGAATTTAACAGGGG
AGAATGGGAAGAAACCAGTGAACAAAGAAATACTAAAAGCAATGTATGGT
AAGTTTACGATCATTATATAATAATAAAAAATGAGATTCTATATATCCTC
TTGGTTTCATGAGAACTACATGCAAGACCTTAATATGATCATTTCTTTTC
CAATGTAGCCATTCCTGTAACGCAGTTTTTCAACAAATGCCGGATTGAAA
GTTTTTCTGCTAAAATTTCGAAAAAGTATCACTCAAAACAAAGAAATCCC
TAGATTCAATCCAAAAATACAACGCATTTTTTAAGGCTTCACTTTTTCTT
ACCTCAGAAAGGTTAAAGATTCTGCTCTAGCCCTTCCGGCTTACTCTCGG
GTACCTACTAGACAGGGAGTTGGAATAAGCGGGGTGGGTGGAAAAATTAT
CAAAACTTAATAAGCGGGGGGTTGGAATAAAAATGTCCTGGGTGGAAAAT
TTTTTGAAAAGCAGCATAATACAGAAGAATCAGGGCAAAAAAGAAACTTC
AAAAAATACTTTTCCGAAAAATTAATAAGTGTGGGGGGGGGAGGGTTGGA
ATGAGAATGTCCTGGGTGGAAAATTTTCGAAAAATTAATTATCAGGGGGA
CGCTTATTAGGTACCCGAGAGTACACTCGATGATTGTAAGCATACATTTT
TGAGATGACATCCTTGTTACTGCATACATAATAGCCCATATTATCTCTGT
AAATCTCAAAATAATTGAAAAACCCATGTTTCCTTTTTGCTTTCTAGCAT
ATGCTCTGGACAAGGGGGATTCCAAAGCAAAACTTGCGGTGGCGTTGCGC
AACAAAATAGAGCAAATAAGAACCAGGCATCGCAAAGCTCCGAACCAAGT
TGAGGGTGAAAATGCATTGACAAACAACAAATAGATTCATGAGGAGCAGT
CAAGAAATGTGATTTGCATATAAATGTGATGTATGTGGAAATTTGTATCT
GGAAAAACATTAGATTTTTCTGATTTTTAAAGTATCGTATAAAACTTTGA
ATAAATGCCCCTTTTTTTTAAAGGCTCGCCCTCTAGGGGTAAAACAAAGA
GTAGATTTTCCCTGAAAATTCAATATTAGTTTTCAAATAATTTATTATAG
CCCCTCTAAAAATTTAAATGAACTCCTTGACGTAATACGATATATTCACA
TAATTATTTAAAAAAATTTATTTTCATACTTTTGTTATCAATATTTTACT
GTTGATTAAAGATATAGATTTTACAATTACTTGATCACTTTGGTTGATGG
TTATTTTAATTTGGAAAATTTATTGATACATGTTACCTTGTCAACCCAGT
TTTTATAGATTTCACACTCGATTTATTGACATCTGCCCGGGGCTGCTTTA
AATTTTTGAGTGCTATGTTTTCTAACAGTCTCGTATTGTGGGTTAGCACT
GTTTGCGTTATCTTATACACACCCAAGCCGTAGCTGCTTGTTAGAGAAGG
GTACAGAATTAATGAGATATATTCTTCAATGAATATACTTATAATAAAAT
CATTGTCTTTTTTTCCAGTATCTAAACTATTCTCATTCATTTTTAGAAAA
AACTAATACATGAAATAAATGATATAATTTTGTTTGCTGTGAAATTCAAT
GGTGGCAATAGTACAATGTGA

Coding sequence (CDS) from alignment at scaffold_138:97427..107597-

>TCONS_00047840 ID=TCONS_00047840|Name=TCONS_00047840|organism=Clytia hemisphaerica|type=CDS|length=5676bp|location=Sequence derived from alignment at scaffold_138:97427..107597- (Clytia hemisphaerica)
CATATGCTCTGGACAAGGGGGATTCCAAAGCAAAACTTGCGGTGGCGTTG
CGCAACAAAATAGAGCAAATAAGAACCAGGCATCGCAAAGCTCCGAACCA
AGTTGAGGGTGAAAATGCATTGACAAACAACAAATAGCTTGAGCAACTTG
CCCCTGGCTTTGATGTCTATGTGGACCAAGAGGAATTTCGAACAGCAGCA
ACTAAAAGTAACGGTACCGGAGCAGTTTTGTTTTTGCTTAGCTGTTTTTA
CACACACAGCGAGTTGCTGGAGATGAATTTAACAGGGGAGAATGGGAAGA
AACCAGTGAACAAAGAAATACTAAAAGCAATGTATGAATCTCTTGGACGA
CCAAAGTCAGGCCTGATTCCAAGCAAAATTGCCAAGAAATATCAGAAAGA
AAACAATGAAAAGAAGAAAGAAAACAATGAAAAGAAGAAAGAAAAAGACG
CAAAGAAGAAAGAGAAAGAACAACAAAAGCTGGAAAAGGAAAAGGAGAAG
ATTGATAAGGAAAAGGAGAAGATTGAAAAGGAAGAACTGATGTGGAGGAA
AGAGGAAGCTTTTATGCAAAATTCTGTACATTTTATACGCTCTCTCAGCG
ATGGAGAAGGCTGTCATGATGCTGATCGCCATGATGAAGTTGATGATGAC
AGTATGCCAGAAGTTGACCACCATGATCATGTTGAAAATAATGATGGCAG
CGACAATCCAATCGAATCAGTAAGTTCTGAAAGTGATGATGATAATTTGA
AGGAAGTACACAGCATGCCATTTGATAGTCCACATAATAAATCTACTGCT
AAATTGCCAAAACCAAAAACACCGTCCACGCCATTGGATAAGCAGCACAA
ACCTGCAAAATCATCACTTTCCACACCATTGGATAACCAGTGCAAACCTG
CAAAATCCTCACCATCCACACCATTGGATAAGCAACGCATACCTGCAAAA
TCGTCACCATCCACACCATTGGGTAAGCAGCACAAACCTGCAAAATCATC
ACCATCCACACCATTGCATAAGCAGCACAAACCTGCAAAATCGTCACCGT
CCACACCATTGGATAAGCAGCGCAATCCTGCAAAATCGTCACCGTCCACA
CCATTAGATAAGCAGCACAAACCTGCAAAATCGTCACCGTCCACACAAGT
GGATGGTAAGGGCAAACCTGCTAAAACTGATTTCCCAAGTCACAATGAAT
CTCCGAAGTCTTCCGCATCAGAAATATTGAGTCCAAGAAAGAGATTAATT
GCCAGCCAAATGAAAGGTGCTGCAAAAAGCCCTTATTTTCAAAAGCCAAA
GAGCTGTTACTTTTGCACACTCAAAGAAAATAAGGCCAAAGAAACGAATG
CCAAAATTGCTGAGTTGGAAGATGAAATCGCTCGCCTCAATAGAGTCCTT
GCAGGTGGAAACTATATCGCATATGCTCTGGACAAGGGGGATTCCAAAGC
AAAACTTGCGGTGGCGTTGCGCAACAAAATAGAGCAAATAAGAACCAGGC
ATCGCAAAGCTCCGAACCAAGTTGAGGGTGAAAATGCATTGACAAACAAC
AAATAGCTTGAGCAACTTGCCCCTGGCTTTGATGTCTATGTGGACCAAGA
GGAATTTCGAACAGCAGCAACTAAAAGTAACGGTACCGGAGCAGTTTTGT
TTTTGCTTAGCTGTTTTTACACACACAGCGAGTTGCTGGAGATGAATTTA
ACAGGGGAGAATGGGAAGAAACCAGTGAACAAAGAAATACTAAAAGCAAT
GTATGAATCTCTTGGACGACCAAAGTCAGGCCTGATTCCAAGCAAAATTG
CCAAGAAATATCAGAAAGAAAACAATGAAAAGAAGAAAGAAAACAATGAA
AAGAAGAAAGAAAAAGACGCAAAGAAGAAAGAGAAAGAACAACAAAAGCT
GGAAAAGGAAAAGGAGAAGATTGATAAGGAAAAGGAGAAGATTGAAAAGG
AAGAACTGATGTGGAGGAAAGAGGAAGCTTTTATGCAAAATTCTGTACAT
TTTATACGCTCTCTCAGCGATGGAGAAGGCTGTCATGATGCTGATCGCCA
TGATGAAGTTGATGATGACAGTATGCCAGAAGTTGACCACCATGATCATG
TTGAAAATAATGATGGCAGCGACAATCCAATCGAATCAGTAAGTTCTGAA
AGTGATGATGATAATTTGAAGGAAGTACACAGCATGCCATTTGATAGTCC
ACATAATAAATCTACTGCTAAATTGCCAAAACCAAAAACACCGTCCACGC
CATTGGATAAGCAGCACAAACCTGCAAAATCATCACTTTCCACACCATTG
GATAACCAGTGCAAACCTGCAAAATCCTCACCATCCACACCATTGGATAA
GCAACGCATACCTGCAAAATCGTCACCATCCACACCATTGGGTAAGCAGC
ACAAACCTGCAAAATCATCACCATCCACACCATTGCATAAGCAGCACAAA
CCTGCAAAATCGTCACCGTCCACACCATTGGATAAGCAGCGCAATCCTGC
AAAATCGTCACCGTCCACACCATTAGATAAGCAGCACAAACCTGCAAAAT
CGTCACCGTCCACACAAGTGGATGGTAAGGGCAAACCTGCTAAAACTGAT
TTCCCAAGTCACAATGAATCTCCGAAGTCTTCCGCATCAGAAATATTGAG
TCCAAGAAAGAGATTAATTGCCAGCCAAATGAAAGGTGCTGCAAAAAGCC
CTTATTTTCAAAAGCCAAAGAGCTGTTACTTTTGCACACTCAAAGAAAAT
AAGGCCAAAGAAACGAATGCCAAAATTGCTGAGTTGGAAGATGAAATCGC
TCGCCTCAATAGAGTCCTTGCAGGTGGAAACTATATCGCATATGCTCTGG
ACAAGGGGGATTCCAAAGCAAAACTTGCGGTGGCGTTGCGCAACAAAATA
GAGCAAATAAGAACCAGGCATCGCAAAGCTCCGAACCAAGTTGAGGGTGA
AAATGCATTGACAAACAACAAATAGCTTGAGCAACTTGCCCCTGGCTTTG
ATGTCTATGTGGACCAAGAGGAATTTCGAACAGCAGCAACTAAAAGTAAC
GGTACCGGAGCAGTTTTGTTTTTGCTTAGCTGTTTTTACACACACAGCGA
GTTGCTGGAGATGAATTTAACAGGGGAGAATGGGAAGAAACCAGTGAACA
AAGAAATACTAAAAGCAATGTATGAATCTCTTGGACGACCAAAGTCAGGC
CTGATTCCAAGCAAAATTGCCAAGAAATATCAGAAAGAAAACAATGAAAA
GAAGAAAGAAAACAATGAAAAGAAGAAAGAAAAAGACGCAAAGAAGAAAG
AGAAAGAACAACAAAAGCTGGAAAAGGAAAAGGAGAAGATTGATAAGGAA
AAGGAGAAGATTGAAAAGGAAGAACTGATGTGGAGGAAAGAGGAAGCTTT
TATGCAAAATTCTGTACATTTTATACGCTCTCTCAGCGATGGAGAAGGCT
GTCATGATGCTGATCGCCATGATGAAGTTGATGATGACAGTATGCCAGAA
GTTGACCACCATGATCATGTTGAAAATAATGATGGCAGCGACAATCCAAT
CGAATCAGTAAGTTCTGAAAGTGATGATGATAATTTGAAGGAAGTACACA
GCATGCCATTTGATAGTCCACATAATAAATCTACTGCTAAATTGCCAAAA
CCAAAAACACCGTCCACGCCATTGGATAAGCAGCACAAACCTGCAAAATC
ATCACTTTCCACACCATTGGATAACCAGTGCAAACCTGCAAAATCCTCAC
CATCCACACCATTGGATAAGCAACGCATACCTGCAAAATCGTCACCATCC
ACACCATTGGGTAAGCAGCACAAACCTGCAAAATCATCACCATCCACACC
ATTGCATAAGCAGCACAAACCTGCAAAATCGTCACCGTCCACACCATTGG
ATAAGCAGCGCAATCCTGCAAAATCGTCACCGTCCACACCATTAGATAAG
CAGCACAAACCTGCAAAATCGTCACCGTCCACACAAGTGGATGGTAAGGG
CAAACCTGCTAAAACTGATTTCCCAAGTCACAATGAATCTCCGAAGTCTT
CCGCATCAGAAATATTGAGTCCAAGAAAGAGATTAATTGCCAGCCAAATG
AAAGGTGCTGCAAAAAGCCCTTATTTTCAAAAGCCAAAGAGCTGTTACTT
TTGCACACTCAAAGAAAATAAGGCCAAAGAAACGAATGCCAAAATTGCTG
AGTTGGAAGATGAAATCGCTCGCCTCAATAGAGTCCTTGCAGGTGGAAAC
TATATCGCATATGCTCTGGACAAGGGGGATTCCAAAGCAAAACTTGCGGT
GGCGTTGCGCAACAAAATAGAGCAAATAAGAACCAGGCATCGCAAAGCTC
CGAACCAAGTTGAGGGTGAAAATGCATTGACAAACAACAAATAGCTTGAG
CAACTTGCCCCTGGCTTTGATGTCTATGTGGACCAAGAGGAATTTCGAAC
AGCAGCAACTAAAAGTAACGGTACCGGAGCAGTTTTGTTTTTGCTTAGCT
GTTTTTACACACACAGCGAGTTGCTGGAGATGAATTTAACAGGGGAGAAT
GGGAAGAAACCAGTGAACAAAGAAATACTAAAAGCAATGTATGAATCTCT
TGGACGACCAAAGTCAGGCCTGATTCCAAGCAAAATTGCCAAGAAATATC
AGAAAGAAAACAATGAAAAGAAGAAAGAAAACAATGAAAAGAAGAAAGAA
AAAGACGCAAAGAAGAAAGAGAAAGAACAACAAAAGCTGGAAAAGGAAAA
GGAGAAGATTGATAAGGAAAAGGAGAAGATTGAAAAGGAAGAACTGATGT
GGAGGAAAGAGGAAGCTTTTATGCAAAATTCTGTACATTTTATACGCTCT
CTCAGCGATGGAGAAGGCTGTCATGATGCTGATCGCCATGATGAAGTTGA
TGATGACAGTATGCCAGAAGTTGACCACCATGATCATGTTGAAAATAATG
ATGGCAGCGACAATCCAATCGAATCAGTAAGTTCTGAAAGTGATGATGAT
AATTTGAAGGAAGTACACAGCATGCCATTTGATAGTCCACATAATAAATC
TACTGCTAAATTGCCAAAACCAAAAACACCGTCCACGCCATTGGATAAGC
AGCACAAACCTGCAAAATCATCACTTTCCACACCATTGGATAACCAGTGC
AAACCTGCAAAATCCTCACCATCCACACCATTGGATAAGCAACGCATACC
TGCAAAATCGTCACCATCCACACCATTGGGTAAGCAGCACAAACCTGCAA
AATCATCACCATCCACACCATTGCATAAGCAGCACAAACCTGCAAAATCG
TCACCGTCCACACCATTGGATAAGCAGCGCAATCCTGCAAAATCGTCACC
GTCCACACCATTAGATAAGCAGCACAAACCTGCAAAATCGTCACCGTCCA
CACAAGTGGATGGTAAGGGCAAACCTGCTAAAACTGATTTCCCAAGTCAC
AATGAATCTCCGAAGTCTTCCGCATCAGAAATATTGAGTCCAAGAAAGAG
ATTAATTGCCAGCCAAATGAAAGGTGCTGCAAAAAGCCCTTATTTTCAAA
AGCCAAAGAGCTGTTACTTTTGCACACTCAAAGAAAATAAGGCCAAAGAA
ACGAATGCCAAAATTGCTGAGTTGGAAGATGAAATCGCTCGCCTCAATAG
AGTCCTTGCAGGTGGAAACTATATCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030450XLOC_030450Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047840-exon-scaffold_138-1575043694:106574..107597TCONS_00047840-exon-scaffold_138-1575043694:106574..107597Clytia hemisphaericaexon
TCONS_00047840-exon-scaffold_138-1575043694:99543..99601TCONS_00047840-exon-scaffold_138-1575043694:99543..99601Clytia hemisphaericaexon
TCONS_00047840-exon-scaffold_138-1575043694:99000..99198TCONS_00047840-exon-scaffold_138-1575043694:99000..99198Clytia hemisphaericaexon
TCONS_00047840-exon-scaffold_138-1575043694:98118..98300TCONS_00047840-exon-scaffold_138-1575043694:98118..98300Clytia hemisphaericaexon
TCONS_00047840-exon-scaffold_138-1575043694:97427..97501TCONS_00047840-exon-scaffold_138-1575043694:97427..97501Clytia hemisphaericaexon
TCONS_00047840-exon-scaffold_138-1510915933:106574..107597TCONS_00047840-exon-scaffold_138-1510915933:106574..107597Clytia hemisphaericaexon
TCONS_00047840-exon-scaffold_138-1510915933:99543..99601TCONS_00047840-exon-scaffold_138-1510915933:99543..99601Clytia hemisphaericaexon
TCONS_00047840-exon-scaffold_138-1510915933:99000..99198TCONS_00047840-exon-scaffold_138-1510915933:99000..99198Clytia hemisphaericaexon
TCONS_00047840-exon-scaffold_138-1510915933:98118..98300TCONS_00047840-exon-scaffold_138-1510915933:98118..98300Clytia hemisphaericaexon
TCONS_00047840-exon-scaffold_138-1510915933:97427..97501TCONS_00047840-exon-scaffold_138-1510915933:97427..97501Clytia hemisphaericaexon
TCONS_00047840-exon-scaffold_138-1491911889:106574..107597TCONS_00047840-exon-scaffold_138-1491911889:106574..107597Clytia hemisphaericaexon
TCONS_00047840-exon-scaffold_138-1491911889:99543..99601TCONS_00047840-exon-scaffold_138-1491911889:99543..99601Clytia hemisphaericaexon
TCONS_00047840-exon-scaffold_138-1491911889:99000..99198TCONS_00047840-exon-scaffold_138-1491911889:99000..99198Clytia hemisphaericaexon
TCONS_00047840-exon-scaffold_138-1491911889:98118..98300TCONS_00047840-exon-scaffold_138-1491911889:98118..98300Clytia hemisphaericaexon
TCONS_00047840-exon-scaffold_138-1491911889:97427..97501TCONS_00047840-exon-scaffold_138-1491911889:97427..97501Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047840-proteinTCONS_00047840-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_138supercontigscaffold_138:97427..107597 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.37657	0.469097	0.200859	0.557792	8.31689	1.13995	0.0456661	4.25237	1.39503	2.3645	1.36677	1.01053	2.00438	2.11877	2.96	5.50272	7.54328	5.08281	1.55646	2.07357	2.8909	2.80017	1.06985	1.73519	1.1768	0	3.93636	4.25472	1.03652	2.44266
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047840 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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