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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047720 ID=TCONS_00047720|Name=TCONS_00047720|organism=Clytia hemisphaerica|type=transcript|length=1028bp
TTTTATACAGTAGAGTTTTTGCAGGATTAATCAATTCAAGTGCTGTGAAT
CTTTGAGGGTAGTTCTCTTTGTCTCAAGTTTcaaatttggaagaaaaaaa
tgtcaagtGATGTCGGAAAACCAGACCAATTTTTAGTCATACAAAAAAGA
GATATcttctatttcaaaaaaatcattaaaacgCAACATTCGTTGCATTA
TTAGTTCCTTTTTTATCTTTATCTAGGTCCTCTTAAAGTCTTTCATTCTT
AAAGAATATACACGTTAAATTATAAGGCATGTGAAAAAAGGTCCATCCTC
CCAAAAGGTATAATCAAATGGTCTATAACTGAAAGTCATTCCAAAAATAT
CAGGAAATTAAAGTaccagaaaaaatgttttatttaaatCCTCTGGGAAC
GCATACCAGAAGacataaaaaaaaatgattagatAGATAGTGACAAGTtc
gactctcgctaattcgaacctgaacgaaaaatataatttgttcAAACTAC
AGAGACAttcgaaatataaggaaaattatgtatatttttttctcttttaa
atgTACCGAGAGCGTTACTTAAAACACAGAAAGATTCAAAGTAATAGAAG
TTCAAAATTATTAGCGTGAGTCAACTCTAGATTATTACgacaaatgaatt
caaaatagTACTCACCTCCTGGCGCAAACTCTTCTTGAGCAAAAGCGCTG
TTTGCGAGTAAGCATAATAGCAGGAAGGCTGCTAAAACCCTTACTTTCGC
CATCTTCTAGTTGTCGTTGCAACCCAGTTCCCAATAAAGGGAAGTCAGGA
TCCAAGCAACTTTTTGTCTTTTGAAGATAAGACGAACTAAAGGTTGTAGT
TTAAACGCTTTCCAACCAACAAAGCGCCTTTCCTAGTTTCCCAACTTCCA
AATGAtgttttttagctttaaaacaTTTTGGTGAGGGCCCCTTATGACTC
CCCTCAACCCTTCTCTTTTCaatgattatgacgtcacaatagAAAGTATG
GTTTTAGACAATGACTTTTAAACAATAA Run BLAST on NCBI transcript from alignment at scaffold_134:60770..61797 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047720 ID=TCONS_00047720|Name=TCONS_00047720|organism=Clytia hemisphaerica|type=transcript|length=1028bp|location=Sequence derived from alignment at scaffold_134:60770..61797 (Clytia hemisphaerica)
TTATTGTTTAAAAGTCATTGTCTAAAACCATACTTTctattgtgacgtca
taatcattGAAAAGAGAAGGGTTGAGGGGAGTCATAAGGGGCCCTCACCA
AAAtgttttaaagctaaaaaacaTCATTTGGAAGTTGGGAAACTAGGAAA
GGCGCTTTGTTGGTTGGAAAGCGTTTAAACTACAACCTTTAGTTCGTCTT
ATCTTCAAAAGACAAAAAGTTGCTTGGATCCTGACTTCCCTTTATTGGGA
ACTGGGTTGCAACGACAACTAGAAGATGGCGAAAGTAAGGGTTTTAGCAG
CCTTCCTGCTATTATGCTTACTCGCAAACAGCGCTTTTGCTCAAGAAGAG
TTTGCGCCAGGAGGTGAGTActattttgaattcatttgtcGTAATAATCT
AGAGTTGACTCACGCTAATAATTTTGAACTTCTATTACTTTGAATCTTTC
TGTGTTTTAAGTAACGCTCTCGGTAcatttaaaagagaaaaaaatataca
taattttccttatatttcgaaTGTCTCTGTAGTTTgaacaaattatattt
ttcgttcaggttcgaattagcgagagtcgaACTTGTCACTATCTatctaa
tcatttttttttatgtCTTCTGGTATGCGTTCCCAGAGGatttaaataaa
acattttttctggtACTTTAATTTCCTGATATTTTTGGAATGACTTTCAG
TTATAGACCATTTGATTATACCTTTTGGGAGGATGGACCTTTTTTCACAT
GCCTTATAATTTAACGTGTATATTCTTTAAGAATGAAAGACTTTAAGAGG
ACCTAGATAAAGATAAAAAAGGAACTAATAATGCAACGAATGTTGcgttt
taatgatttttttgaaatagaagATATCTCTTTTTTGTATGACTAAAAAT
TGGTCTGGTTTTCCGACATCacttgacatttttttcttccaaatttgAAA
CTTGAGACAAAGAGAACTACCCTCAAAGATTCACAGCACTTGAATTGATT
AATCCTGCAAAAACTCTACTGTATAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047720-exon-scaffold_134-1491911889:60770..61797 | TCONS_00047720-exon-scaffold_134-1491911889:60770..61797 | Clytia hemisphaerica | exon |
| TCONS_00047720-exon-scaffold_134-1510915933:60770..61797 | TCONS_00047720-exon-scaffold_134-1510915933:60770..61797 | Clytia hemisphaerica | exon |
| TCONS_00047720-exon-scaffold_134-1575043694:60770..61797 | TCONS_00047720-exon-scaffold_134-1575043694:60770..61797 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_134 | supercontig | scaffold_134:60770..61797 . |
Blast
The following BLAST results are available for this feature:
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