TCONS_00047713 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047713
Unique NameTCONS_00047713
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1559

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047713 ID=TCONS_00047713|Name=TCONS_00047713|organism=Clytia hemisphaerica|type=transcript|length=1559bp
TGGTAGGAAGAGACCTGCACTTTTAAATGGAGAAAATCTATGGTATACAA
AAACCAGGATTATGAATTCATAAATTTtggtttcgaattttgaaacaTAT
ATTCATATTTGGTTGTGTTTGTAGATGGGTCATAACGTCTTGAGAGTTTG
AGCTTTTATATGGATTCActctttgaaagattttaatGGATACGAAATTG
TTTGGGCCTTTTTATTGATGTAACCGAGGAAACCATGGGCGTTTTGATTA
GCAAGAAAAAGCCTAAGCCTGCACCAAGCCAACCAGAATTGCAACCATCA
CAACCAAAACCTGAACCCGTCCCAGAGCCGGAGCAAGAACCGAGTCGAGA
GCCAACTCCTGAAGTGGTATCAGaagaagaagaagaagaagaaccaGAGG
AGGAGCAAGAAGAAGAAGAAGAAGAACAGGAAGAACCAGAGGAAGAAGAA
GAGCCAGAAGATGAGCCAGAAGATgacgaaaacgaagaagaaaaagaatc
aGGCAATGAGGAAGTAGTTGAATATTCATCAGATGTTGCATCTGAACTGT
TGAAAGGTGTTATTGACATCAATATTCCATCACAAGCACGTATTGTTCGC
ATCTTCACCAGTTCCACATTCACCGATACGTTTAACGAACGAAATGCATT
AATGGTGAAGGTGTATCCAAAGTTGAAAGAATATTGTCAATCAACTGGAT
ATGATTTTCAAGTGGTGGACATGAGATGGGGTGTACGTGACGAAGCTACC
GCTGACCACATGACGTCAGAATTGTGTATGAAAGAACTGAAATTGTGTCA
AGATATTTCGACAGGGCCGAGTTTTGTTACTTTTTTGTCGCACAAATACG
GTTACCGACCATTTCCACCGAAAATTGTCGCCACCGAATTCGAAGCAATG
TTTAAAGTCGTTGAAGAACAAAGCGACAAAGATCTCcttcaaaaatggtt
tctgAAAGACGAGAACATTATTCCAACTACATACGTCTTACAACCAATCA
CCGACCTTTTACCGAATTACGGAAATCataatgtttctaaagaagaaCGC
GGCAAAGCATCTGGAGAATGGTGGGCAGCTTTTGAGCGAATGCAAGTTGT
TTTTCGGGAAGCTGCCGATAAAGTATTCAAAGGAAAGCCAAATATTCGAT
GGAAATACTTTCAATCCGTTACGGAAGACGAGATCCAACGAGGTATACTC
AAATCTAAAGATGCTAAATCACAATGTCATTGGTTCTATCGAAACATTCA
AGATCTGCGACAAAACATTGATGACAAGGCGGCTCGCAATTTCATTGATA
AGCTTGGCCAGAATCTAGATGACGAAGCTGTCGGCTTCACCGAGGATTTG
AAAGCAACCAAAATACCTGGTGTTTTACCACAAGAGAATATTAACACCTA
TGATATCCAATGGTCTGCAGAACACGGCGTCAATCCGGAAACCTCTGATG
TTCATAAGAAATATATTGAACAACTATGTGATGATTTTTATCGTATATTG
GTCGTCATGATTGATAATGGAATTAAAGAAAGAAGGCAGTATCTTACTCA
CAAACTTGG
Run BLAST on NCBI

transcript from alignment at scaffold_134:128450..135871-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047713 ID=TCONS_00047713|Name=TCONS_00047713|organism=Clytia hemisphaerica|type=transcript|length=7422bp|location=Sequence derived from alignment at scaffold_134:128450..135871- (Clytia hemisphaerica)
TGGTAGGAAGAGACCTGCACTTTTAAATGGAGAAAATCTATGGTATACAA
AAACCAGGATTATGAATTCATAAATTTTGGTTTCGAATTTTGAAACATAT
ATTCATATTTGGTTGTGTTTGTAGATGGGTCATAACGTCTTGAGAGTTTG
AGCTTTTATATGGATTCACTCTTTGAAAGATTTTAATGGATACGAAATTG
TTTGGGCCTTTTTATTGATGTAACCGAGGAAACCATGGGCGTTTTGATTA
GCAAGAAAAAGCCTAAGCCTGCACCAAGGTAATTTTTCCCATCGACATAT
ATCGTCGACATATATGACGTTCAAACAACGTCAATCTAACGTTCATTACA
TCCAAATGACGTTAAAAACATTGAAACGACATTGTGTGCCAGCTGAGTTT
TTTGACACTTTGTCTTGTTTTGTGTTTTTTTTGTATTTTGAAAGTCTATT
TTCCATACTTGAAAAGACTTTCTGTTAGCAGGTATTTGCGACGAACTTAT
TGTTTTCAGTGGATACCCAGCTTAGAGTTGCTATCCTACTTTTATACTAA
GTTAAATAGATGTATTTTATTATCTTTTTGGCTCAGCCAACCAGAATTGC
AACCATCACAACCAAAACCTGAACCCGTCCCAGAGCCGGAGCAAGAACCG
AGTCGAGAGCCAACTCCTGAAGTGGTATCAGGTAGTACTTCATATTCGGT
TTCTTAGTGTAGTGAAATAAAAAGATTCACAAAGTACTCAAGAAAATTCG
AGTTTTATTAGGTAAAATTGATAGGGATCGACCATTTTCATAATCTCTCA
ATCCAACGCCTGTCAGGACCCCTCTCCTTCGATACCCATCATCACGTGAA
AATCTGGTTCATCACGCAAAAAAAAATCCTCATTGCCTTTTTAATATCTG
TTCATTATACAAAAAAAGCAAATTAAAATCACGTCATCGTTAATACCGTT
CGGAGGGCTTTTCATACTTTCACTACCAAGAAATATTAAAGATTCTAAAA
AGTTGCAAAATTCAATTATTCTTGTCAATATTCCCATAGCATCTTAACTT
TTCTCTCTTTCATTTTTTAGAAGAAGAAGAAGAAGAAGAACCAGAGGAGG
AGCAAGAAGAAGAAGGTAAAACATTGCAATTATTGTATCTTAAGTTGTCT
TTGTAATTGTTGTCTTAAAAATGAAACTTGAATTAAATATTAAACTAATT
AAATTAAAATTAAAAACTAATTGAAAGTCCTATTAAAAATGGTAAAAATA
CTCTTACACCAAAATCTTTTCAAGATAATTAAAGAAAGGTTTATTCTCAA
CTTCAGTTGAGCTATAATCTGAGAATGTCTGTATGTCTGTATGTCCGTCC
GAAAACTTTAGGGCAGGCTGGACACTTCAAAAAAGGTCGGATTTGGCTGA
AATTTGGCACACTTGTTCCTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATAT
TTGCTACCTAATACTAAATATTTGAAATGTTACAATTGGGCCTTCTAATA
ACGGGAAAATCTGAAGTTGAGCCCAGTGCGGTGCGCACGTTCGACTATGA
TTATTAACCTTGATAGAATATTTGTTATTTTAACTTTATTTGAGTTAGAA
TCTGAGAATATAATCTATTTGTTTATCTATGTATCCGGTGACGTATCCTT
TCAAAATAATGGGTAGACTTGTGGCTTGATTTAACTTGCCAGAAATTTCG
CAGACTTTTCCCTTTAACTTATGTAGCCTAAGACAAGTTTCAACACCTAA
ATGAGTCTGGAACTCAAAACCTTAATTATCAATTTTAGAATTGGGCCTAA
GTAAGGATGACGTAACAATATACTAAAGCTCGGTTAGCACGTTCAGTTAA
AATAAAATATGATAGAAGAAAAACAGCATACCTTGGAGCTACGACCAGAA
AATCTTCCCCACATACAGGGTCACCTTCATGGATCTTCCGGGGAGAATGT
GCGACGTTTCGGGGGGTACCTCTTGACGCTTTGTCTGCACACCGAACCCT
CTCAGAGACGTGAGGTCCCAATACACTAGGACATGCTTGCTGATTCTTTC
GATTAAGCTCCATCTAGCCAAATGACACCATCTCTCTTTATCAAATAATT
ATATATCAATTTTTTAGAAGAAGAACAGGAAGAACCAGAGGAAGAAGAAG
AGCCAGAAGATGAGCCAGAAGATGACGAAAACGAAGAAGAAAAAGAATCA
GGCAATGAGGAAGTAGTTGAATATTCATCAGATGTTGCATCTGAACTGTT
GAAAGGTGTTATTGACATCAATATTCCATCACAAGCACGTATTGTTCGCA
TCTTCACCAGTTCCACATTCACCGGTATGTTTTAAATGCTCTTCATATCA
ACTACACGTTTTTTTATAAGAACATCCAAAACTTTTGAAGCCTTCGGATG
CTCTTAACTTTTTGATCTTCAAGCCTTAGTATATAACATGCTTTCAATTT
CACCATTTTGTGAGTGTTTTTGTCACTTTTCCTAAGAAATCGGGTGGTTT
AGAGTCCACAAAGCCTTAAAATGTTCTTAACTTTTTGATCTTCAAGCCTT
AGTATATAACATGCTTTCAATTTCACCATTTTGTGAGTGTTTTTGTCACT
TTTCCTAAGAAATCGGGTGGTTTAGAGTCCACAAAGCCTTAAAATGTTCT
TAACTTTTTGGCCATCGAAGCCTTATGTTCTCTTATAATTTGTTCTTATA
AAAAAAACGTGTTTGTTCAGACGTTATGGTTTAGCATCGTTTCTGTAGGC
TCTCTACGGAGAGGAAGTGTTCATATTGGTTTCGGAGCAGTTCCGTTCCG
ATAAAAATAGTGGATGGTAGCTGTTTTGATCCGTTTTGCTTTGCAACATA
TTTTTTAGGTTTATAATAAATTTTGGTGTCCACACAGTGTCTGTGTCGGA
ACCGTTTCGTTGCGAACCGTAATGTCTTAAAATGAAAAGTCTTGAATGCA
CATCAGCCTCAAGGGGCTGACAGGCTTGCTATAGAGTAAGATAGACTTGC
TAGTGTAATGTTGATTTACTTGTTGAGACTGTTCTTTGATTTTTGACATT
TCAACGAGCGAGTTTAGTTTGGATTATAGGAATTGAATAAGTCTTCATTG
AAAAGCTGGAACTATACTTTCTTCAAACTGTACTTCATCAAAAGATCAGG
GATACGGAAAAAAATATAATTTTTTACAAGCTTTCTATATTGGGAGGGGG
AAGGTTATGGTCATGGTAATTGTCAATGGTTCTCATGGTATCTTGAAGCA
CATCTTATTAAATTGTTTGATTTCATCCCAGATACGTTTAACGAACGAAA
TGCATTAATGGTGAAGGTGTATCCAAAGTTGAAAGAATATTGTCAATCAA
CTGGATATGATTTTCAAGTGGTGGACATGAGATGGGGTGTACGTGACGAA
GCTACCGCTGACCACATGACGTCAGAATTGTGTATGAAAGAACTGAAATT
GTGTCAAGATATTTCGACAGGGCCGAGTTTTGTTGTAAGTAAATTCCTTC
CAAACCTTCAAAAAGTAGTCTAGCATGCAACTAAATTCAAGTGAGAGTAT
GACAAGTATGGCAAACAAAAATCAAGGACATAACAGTTTATGGAAACTAA
CATTATCACTTAACGCATTATCATATAACATTGGAGTATGAATTTCAGAT
TGTGAAAATATCATTCTTATCAAAGTTGCATCACATCAGAATTTTAAAAT
TTAAAAAAAGTTTCAAATAATACCACATATAACTAAAAGTTAAGATATTT
AATTAAAAACTTTTCTTTCTTAGACTTTTTTGTCGCACAAATACGGTTAC
CGACCATTTCCACCGAAAATTGTCGCCACCGAATTCGAAGCAATGTTTAA
AGTCGTTGAAGAACAAAGCGACAAAGATCTCCTTCAAAAATGGTTTCTGA
AAGACGAGAACATTATTCCAACTACATACGTCTTACAACCAATCACCGAC
CTTTTACCGAATTACGGAAATCATAATGTTTCTAAAGAAGAACGCGGCAA
AGCATCTGGAGAATGGTGGGCAGCTTTTGAGCGAATGCAAGTTGTTTTTC
GGGAAGCTGCCGATAAAGTATTCAAAGGAAAGCCAAATATTCGATGGAAA
TACTTTCAATCCGGTAAAAAATTCATATAGCTTTTAGAAAGGGTCTAGGG
AAGTTAATTCTTTATTACATATAGCACAGCATTAATTCAAACATGGTTTC
TTAAACTTTCCAGAACGGTTAAGTCTTTATCTTTTTTCAAAAAGGACGTC
ATTAACAAAATACGCAAAACACTATACAAAAGAGCGACGGACAACTTCAA
ATGGCACTTGGGCTCACAATGTATATTATAAATTTGTTGCGACGCTACAG
TGATGTAATGATTCACAGTCCCGTAGCAACTAGGGGTGGGGCGTGGGCAT
TGCACCCCCAATAATCTTTTCAAAGATGGTTTCTTCAAATTTTTCAAACT
AGTTTTCCTTACTTACTTGTTGCTAATAATTATAAATCTTTTGCTTGAAT
TCATTGATTTTTCGAGGCCTTTTTTAAAATTCGAAAACCAGGGTTGGCTC
TTGCGGTGTCACTCAACTTCAACCCCTTCTCCCAATATTAAAATTACTTT
TAACTTTAAAGCTGGATTCATGTAATCTTGTTTTATTTAGTTACGGAAGA
CGAGATCCAACGAGGTATACTCAAATCTAAAGATGCTAAATCACAATGTC
ATTGGTTCTATCGAAACATTCAAGATCTGCGACAAAACATTGATGACAAG
GCGGCTCGCAATTTCATTGATAAGCTTGGCCAGAATCTAGATGACGAAGC
TGTCGGCTTCACCGAGGATTTGAAAGCAACCAAAATACCTGGTGTTTTAC
CACAAGAGAATATTAACACCTATGATATCCAATGGTCTGCAGAACACGGC
GTCAATCCGGAAACCTCTGATGTTCATAAGAAATATATTGAACAACTATG
TGATGATTTTTATCGTATATTGGTCGTCATGATTGATAATGGAATTAAAG
AAAGGTTGGTACCCATTTGAGAGGGCCTTAAATCTGTTCCAAATTTACCA
TTAAATGAGGATTGTTTATTATATTCAATACAAAGTTTTGAGCTCCTGAT
AGTTTCACGCTTCTGCCTTTATCCCACCTGAACTTTATATAGACTCTGGA
GGTAGTTTCTGAATCCCGGCCAAACAAAATCTTTTGATCGAAGTTTTTTG
GTACCCTAATGGTTGCACTACCACTAATCAATAGCGGTGTAAAAATGCAT
GGGGATCGCTGAATCTACTTTTTTTGGCTTCTTTGCGGGTAATACTAAAG
AAATCCGGTTTATAAAGGTCAGTGCTTTATTCTCATCTTTGGAATGTTAT
AACACAATCGTGACTGCATCTTCCTATCTAATTGTAGAAGGCAGTATCTT
ACTCACAAACTTGGATTTTTTCCCTTTACTATCGCTCTAAACCTTTCATG
TAGATGTCAAGTACTGCTAATAATCAGGTACCCGAGACTAAGTATGACTG
GAGGTGACCACACTTTCACCGCGGCTTCTTGACGTTTTGATGTTTGTCAA
ATATTAATCATTATAATTATGTTTGAGTCAAATATATTCCAAAAAATTCA
ATAGGCTGCTAACGAATAATTTCCGTGGAAAGGGCAAATATGAAGCAAGG
AACTTATCAAAGCTATCAAAGTTCCATTCAAATATGAACAGAAAGAGAAC
AGTACAAAAGAAACAAAAAAAATTCAGATTGCAGAAAAACAAACTATCCT
ACTTTCCATCCTTAGAAAGGCTGCTGACATTGATGACGAGCTGGTCAAAG
AAATATGCCAGCATTCATCAATGTGTAAAGAAAAAAGTCGAATTTTCCAA
GGTCGACAAGACATCATTGATCAAATCATCTCTTACATTGGTAAAGAAGA
AGAGGACGAGGAGAATCGTACAACTCTGGTAGTTTATGGTGAATCTGGNA
AATCTGTTCCAAATTTACCATTAAATGAGGATTGTTTATTATATTCAATA
CAAAGTTTTGAGCTCCTGATCGTTTCACGATTTTGCCTTTATCCCACCTG
AACTTTATATAGACTCTGGAGGTAGTTTCTGAATCCCGGCCTAACAAAAT
CTTTTGATCGAAGTTTTTTGGTACCCTAATGGTTGCACTACCACTAATCA
ATAGCGGTGTAAATGCATCGGGATCACTGGATCTACTTTTTTTGGCTTCT
TTGCGGGTACTACTAAAGAAACCCGGTTAGTGCTTTATTCTCATCTTTGG
AATGTTATAACACAATCGTGACTGCATCTTCCTATCTAATTGTAGAAGGC
AGTATCTTACTCACAAACTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030386XLOC_030386Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047713-exon-scaffold_134-1575043694:135594..135871TCONS_00047713-exon-scaffold_134-1575043694:135594..135871Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1575043694:135191..135285TCONS_00047713-exon-scaffold_134-1575043694:135191..135285Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1575043694:134757..134801TCONS_00047713-exon-scaffold_134-1575043694:134757..134801Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1575043694:132448..132654TCONS_00047713-exon-scaffold_134-1575043694:132448..132654Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1575043694:131288..131490TCONS_00047713-exon-scaffold_134-1575043694:131288..131490Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1575043694:130659..130998TCONS_00047713-exon-scaffold_134-1575043694:130659..130998Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1575043694:129768..130131TCONS_00047713-exon-scaffold_134-1575043694:129768..130131Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1575043694:128450..128476TCONS_00047713-exon-scaffold_134-1575043694:128450..128476Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1510915933:135594..135871TCONS_00047713-exon-scaffold_134-1510915933:135594..135871Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1510915933:135191..135285TCONS_00047713-exon-scaffold_134-1510915933:135191..135285Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1510915933:134757..134801TCONS_00047713-exon-scaffold_134-1510915933:134757..134801Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1510915933:132448..132654TCONS_00047713-exon-scaffold_134-1510915933:132448..132654Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1510915933:131288..131490TCONS_00047713-exon-scaffold_134-1510915933:131288..131490Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1510915933:130659..130998TCONS_00047713-exon-scaffold_134-1510915933:130659..130998Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1510915933:129768..130131TCONS_00047713-exon-scaffold_134-1510915933:129768..130131Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1510915933:128450..128476TCONS_00047713-exon-scaffold_134-1510915933:128450..128476Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1491911889:135594..135871TCONS_00047713-exon-scaffold_134-1491911889:135594..135871Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1491911889:135191..135285TCONS_00047713-exon-scaffold_134-1491911889:135191..135285Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1491911889:134757..134801TCONS_00047713-exon-scaffold_134-1491911889:134757..134801Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1491911889:132448..132654TCONS_00047713-exon-scaffold_134-1491911889:132448..132654Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1491911889:131288..131490TCONS_00047713-exon-scaffold_134-1491911889:131288..131490Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1491911889:130659..130998TCONS_00047713-exon-scaffold_134-1491911889:130659..130998Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1491911889:129768..130131TCONS_00047713-exon-scaffold_134-1491911889:129768..130131Clytia hemisphaericaexon
TCONS_00047713-exon-scaffold_134-1491911889:128450..128476TCONS_00047713-exon-scaffold_134-1491911889:128450..128476Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_134supercontigscaffold_134:128450..135871 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.111439	0.000582648	0	4.37921e-06	0.00990297	0.0231715	0	0	0	0	0	0	0	0	0	0	0	0	0	0.00596615	0	0	4.52872e-06	0.749854	0	0.199454	0	0.0223738	0
Blast
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BLAST of TCONS_00047713 vs. Swiss-Prot (Human)
Match: NWD1 (NACHT domain- and WD repeat-containing protein 1 OS=Homo sapiens GN=NWD1 PE=1 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 1.240e-31
Identity = 95/288 (32.99%), Postives = 145/288 (50.35%), Query Frame = 1 
Query:  655 VKVYPKLK--EYCQSTGYDFQVVDMRWGVRDEATADHMTSELCMKELKLCQDISTGPSFVTFLSHKYGYRPFPPKIVATEFEAMF-KVVEEQSDKDLLQKWFLKDENIIPTTYVLQPITDLLPNYGNHNVSKEERGKASGEWWAAFE--RMQVVFREAADKVFKGKPNIRWK-YFQSVTEDEIQRGILKSKDAKSQCHWFYRNIQDLRQNIDDKAARNFIDKLGQN-LDDEAVGFTEDLKATKI---PGVLPQENINTYDIQWSAEHGVNPETSDVHKKYIEQLCDDF 1488
             +  P LK   +CQ  G  F+VVD+RWG+R+    DH+T+ELC++E+  C   S GP+FV  +  +YG    P +I   E+E +   +    SD +L+ ++F +DEN  P TYVLQ      P  G      EE    S     A E  R+ ++ +E            +W+ Y +SV E EI+R +L S+D +     F R IQDL ++I +  A   +D+L    LD +A      LK+      PGVL      T+ + WS +  VNP+ +  H  Y+++L + F
Sbjct:    7 CRALPTLKCQTFCQRHGLMFEVVDLRWGIRNIEATDHLTTELCLEEVDRCWKTSIGPAFVALIGDQYGPCLIPSRIDEKEWEVLRDHLTARPSDLELVARYFQRDENAFPPTYVLQA-----PGTGE-ACEPEEATLTSVLRSGAQEARRLGLITQE------------QWQHYHRSVIEWEIERSLLSSEDREQGATVFLREIQDLHKHILEDCALRMVDRLADGCLDADAQNLLSSLKSHITDMHPGVL-----KTHRLPWSRDL-VNPK-NKTHACYLKELGEQF 269
The following BLAST results are available for this feature:
BLAST of TCONS_00047713 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NWD11.240e-3132.99NACHT domain- and WD repeat-containing protein 1 O... [more]
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