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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047675 ID=TCONS_00047675|Name=TCONS_00047675|organism=Clytia hemisphaerica|type=transcript|length=1668bp
tttttatttgaaactttgtgacgtcgcagtactttttcatgaaattgacg
tcagaacttttttcgtttacaaatagcagtgtagagtcttctctaatccg
agttttctacgcttgtcaaacttagcgcgagactttttgtatcgaaggtg
gataggttttgcagccgcggcgttcaaattttagaaaccttaacatatgt
tactgggctagcgttacagacatttttcataaactcgtttagtatagtaa
gatttCATTGAATGGATTGAAAGACACAGATCATAGATATTTTTCATGAA
CATTAATCAAATGGTTAATAGATGTTAGTCACACATTTAATTGACACTTA
ATCCTTGATAAATCAATACAAAAGTACATTACTATGGATTATTACATAAC
TTGCAATGGGAGAATACTTCAAGGTGATGAGACCCCCAATAATATGGGCA
CAATTAGAATTCACCCAAGGCTTGTGGGTGGAAAAGGAGGTTTTGGATCA
ATGCTGAGAGCCATTGGTGcaagaattgaaaaaacaaccaatcatGAAGC
ATGTAGAGATTTGAATGGCAGAAGAATGAGAGATGTcaataatgaaaaaa
agATAACAGAATGGCTGCAGGAGCAAGATACCAAGGAGAAGGAAAGAATC
CAGAAACATAACGACAGAATAGAGCGAACACTAAATCCCAAAATGAGATA
TGAGGATAAGGACTACACCAAAAGTATACAAGGCAATGTTGACAAAGTCA
ATGAAGCTGTCAAAATTGCAACTAccgtaaacaaaaataaaccagGTGAA
AAGCGTAAAACCACAGAGCAAGTTTCTAATagtaaaaaatccaaaatgtg
gTTGGGTCTTGATGAATTAGACTCTGATGTAGATTCTGAGGTTTCGGAAA
GTGACCCAGAAGATGGTGAAATCACTAACAAACTTGCCAAAGAACCGAAG
ACAGATCAACAGACTAAAAAGCAAGAAGAATCCTCCGGAGATCCAGTAAC
AACTGCAATTGAATCTGATAAGGACAAGGTGCCTGAAGAGAAAAAATATG
TAGAAAATAAAGAGGAATCTTCgccaaaacaaaatgaagaagTACAAAAG
AAAGCTACGGGTCCTGAATATTTATGTCTTGATGAATACAAAGATGCTGA
GGAATTGCAATCAGTTGGTTTGGAACGTTTAAAATCAGCTTTAATGTTTC
ATGGTATGAAATGTGGTGGCACATTACAACAACGTGCTCAAAGATTATTT
CTTACCAAAGGAAAAAAATCTCTGAAAGATCTTGACCCTTCTTTGTTTGC
CAAAAAGAAATAATTGATATCTTAGTAACATCATTTTCTTTTGcctattt
tcatttcatttttgaaatcagaTACTGGGAAATTTGCTTTATCAATCAAA
GATGTTTACTATTGCAAAAACGAGAACAATGaaaaatttcttcgaatttt
tcaatttgtttattttgtaaagcTCTACCTCACCCAATTTACTCTCCCAA
TAAtttcaaagtaaattttttataataagAATTGTAACATGAATATGTGG
AAACAGGAATTTTATTGAGGCTTGAATTCTATCATTGTTgttactttatt
tttatttatgaaTAATGTTTTTTGTAGATATAATTTTATCCtttctcttt
taaaattttaatgtacCG Run BLAST on NCBI protein sequence of TCONS_00047675-protein >TCONS_00047675-protein ID=TCONS_00047675-protein|Name=TCONS_00047675-protein|organism=Clytia hemisphaerica|type=polypeptide|length=309bp
MDYYITCNGRILQGDETPNNMGTIRIHPRLVGGKGGFGSMLRAIGARIEK
TTNHEACRDLNGRRMRDVNNEKKITEWLQEQDTKEKERIQKHNDRIERTL
NPKMRYEDKDYTKSIQGNVDKVNEAVKIATTVNKNKPGEKRKTTEQVSNS
KKSKMWLGLDELDSDVDSEVSESDPEDGEITNKLAKEPKTDQQTKKQEES
SGDPVTTAIESDKDKVPEEKKYVENKEESSPKQNEEVQKKATGPEYLCLD
EYKDAEELQSVGLERLKSALMFHGMKCGGTLQQRAQRLFLTKGKKSLKDL
DPSLFAKKK Run BLAST on NCBI transcript from alignment at scaffold_133:395961..401946- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047675 ID=TCONS_00047675|Name=TCONS_00047675|organism=Clytia hemisphaerica|type=transcript|length=5986bp|location=Sequence derived from alignment at scaffold_133:395961..401946- (Clytia hemisphaerica)
TTTTTATTTGAAACTTTGTGACGTCGCAGTACTTTTTCATGAAATTGACG
TCAGAACTTTTTTCGTTTACAAATAGCAGTGTAGAGTCTTCTCTAATCCG
AGTTTTCTACGCTTGTCAAACTTAGCGCGAGACTTTTTGTATCGAAGGTG
GATAGGTTTTGCAGCCGCGGCGTTCAAATTTTAGAAACCTTAACATATGT
TACTGGGCTAGCGTTACAGACATTTTTCATAAACTCGTTTAGTATAGTAA
GATTTCATTGAATGGATTGAAAGACACAGATCATAGATATTTTTCATGAA
CATTAATCAAATGGTTAATAGATGTTAGTCACACATTTAATTGACACTTA
ATCCTTGATAAATCAATACAAAAGGTTGGATTCCATTGATTAATATTTAA
TTTAGGCGATATTGTAAATAGTCCAGTATTTTGGCGAGGGGAATAGACCT
TTTTTCAAAGAGGCCACCTTGTGAATAATTATATAGTCTAGCAGAAAAAC
AATGATAAAACCATGCATAATTATTACAATATGCATGATACAGTAATTAT
GCATGGCCCTATCATTTTCTTTATTGTTTATGGCTGGAGACTACATAATT
ATTCAACAGAATGTCCTCTTTGAAAAAAGGTCTATTTGATGTTAATGGCA
TTCAAAAATTGTGCGAGGTTTTCAAAAACAGCAAAAAAAAAAAGAAATTT
GAATATATATCCTTTTTAAAAATTAGTCTTTTCAAACGAAACTTCACAAT
ATTGGTTCTAAAGTAAGTTGAAGTAGGTTGAAAATAAAAATTTTGTAAAA
TGGGCCAAAATTGCGGCACAAATCAAGAAAAACACTATGTTGATAAAACA
GCAGCCACAAATTTGTTCAATGAGTAAAAATCATTTTTTTCAGATGAAAC
TCGTAGCAAAAGGGTTTATCCACAAAATATCAAAAAAGGAACCAAAATGG
GCCATTCCAGTTTTTTTTCGTTTCCCCCCCCCCCCAATGGACGACATGGA
ATTTCGGTAGCAAATTGCTTTCAAGAAAGTCAGGAATTTCCTTAAAAGAT
TTACAAAATACCTATCAAAACCGTGGAATTCTGTTGCTGTAACCTAAAAA
AATCATGGAATTCCAATACTATAAAGCAAAATTAAGTAAAATTCATAGAA
TTCCGATACTTTCTCTTTAAAGTTTGCCTGGAATTCCGTGCCAAAATTTA
TTTCAAAAATTGATGTCATCCATTAGGGGGTAATGTTTTTTTTTCTGGAA
TGGCCCAATTATTGGGTCATTGGGCTAAAATTGCGGCTCAAAGTTGGCAA
TTTTTTTCATATATGCTTTGATTGAAGCCATATTTTAAGCCCATTGAAAA
CCCTGCAGCGACAAATTAAACCCACAAGTATCTTAAGACCTTAAACTACC
AATTTCAAGAAAAGCGGTTAAAAAATATTGAAGTCTTAAAGCAGGACAGC
ACACAAGCCAACCCTAAAAATGCCAACTAATACTTATATGTAACAGCTCA
GAAGGTTATAGTTACAAAAAATGGTATTTGCAGCCACAAAATGTACACTC
TTTCTTAAAATAACACTGTATTGTGTCAGATTGTGTTTGTTTTGTATTAG
CCTTTGCAAATATTCATTTTTCGAAAGCAAAACCCAACCTGGAATGTGTA
AATTGATAAATTAGTGATTTAAGTATGATTGAAGCCACATTTTAATCCAA
TTGAAAACCCTGCAGCCACAAATTAAACCCATAAGTATCTTTATCAGACC
TTAAACTACCAATTTCATAAAAAATGGTTAAAAAATATTGAAGTTTTAAA
GCAGGACAGCACATATATGCCAACCCGTTGAGTGAGCCACAGTGACATAC
AGCCACAAAACCTGCCCTCACTTTGCCATCTTATATTTCAAGACTGAATC
ACTCAACTTCAAAGAGGGCCATATTTTTGGAAAGCTCATCAATTTCCTTA
TTTTATGGAATTTTGTACTACACAGCAGCCACAAGAATGTCAATGCTGTG
GGCTAAAAAGTTATTGTGATTGAAAACCTCACTTTTTGGGGTTCTATTTT
TGAATGCAATCTGTTCTGTTTACCGTCCCGTTGCAAAAAATATTTGATGC
AGCAAAATTTCATTATTCATTATTCATTATTCCTACCTGGTGCTTCTCAT
TTCCAACGTTGAAATTCCACCATGAAATCGAACTGCCTTCACTTTCGGAA
TAAAAATGACATACACGAAAATTCAAACGCGTTCGAGACGCGTCCAAAAC
TCGAATTTCTAAAACGCCTTTGTAGCCACCCACTGCTTAAAAAAATGCCT
GCCCCATTTGCGGACATGATTGGAACCATACTTTTTACTTGAGGCGCACA
TTTTGTTAGCGAAGATGTTATTTTTGATTCACTTTGAGTGTTTTGGATAG
CTTGGCACAGGAAAAAAAGAAAATAATGAATTTTTAAGAAATAATGAACT
TTTTTGAGCGGGGGCACAAGAGCATGCAGGCAGTCAATGCTAAACAGAAC
ATCAAATTCCCCTCGCCTTTTTAGTATTTTTGTCTGGTAGAGGAAAAGTA
TTATCTATTAAATTCCCCGGACAAAACTGCCTGGTGTTTGTGTGCATAGC
TGTCAACTCTCCTGCATTGCAAGGGAGACTTGCATTTCCAAACATTCACC
AACATTTTGAAAAATCTCGGGCATCATCCATCAGCATCATCCATCAACAT
CACGCCCGTTTGCGGAAATGCAAAAAAATTACCTACCTTTACTAAATATG
TCATATCTCAACATACAAACAAGCTTTTTGAATTCTAATGAAAGCACACG
ATTTTCATGTAAATTTCACACCTTCTTGGTGCGAAAGAGAAATCGTGTAT
TTTTTAATACACCGTTCACTAACTCAAATCAAATGACTTTGGAGGTTCGA
TGAAATGGTGGCCGAATTGCCGTCCCATGTTTTGTCAGATAGTCCCAAGT
TAGAGCAGTTGACGGAATCTCGGAAACGGCTTGAGATTTTTTTAATCTGT
AAATAGCATGTGATTCTGGCAGGTATAAATTCTACACATGCCCTGAAAAT
TCGAGAAGTCTAGCCTGTGTACTTTTTATGCTAGACTGAATTAAAAACTA
AATTTTCACATCCCATTAAACAAAATTTTGAACTTTTCGATCAAATATCT
CAGAAACGGCTTAATCATTTTTTAATTTTGTAAAAAGGATACGATTCTCA
TGTAAATTCTACACATTCCCTGAAAGTTACAAATGATGACTAGCCTATAC
TAGTATACTTTCCCACTAGGCTGTATTAAAGGCTAAATTTTTACATTTTT
AACAAAATTTCGAACTGCTAAGATATTAGCTTGAAATTAAAACTAAAATA
CCAAGGTCTAAATTTCTGTTTGCAAAAAAATGTTTCTTTGGAATGGAAGC
CTAGACTGCTCACAATTGACAGTTAAATATCATGATACAACCTTGATTTC
CTAAGGAAGAGGAGCTGTTTTTTTCGTCCAGGGTAGGCCCTTGGGAGAAG
GAGACCCTTATCCAGGACACTATGAACCAAATTTGGACTTAGAAACTTTA
TTGGATTGAAAAATCAACCCAAAACCAACTATTTTTTCAGTACATTACTA
TGGATTATTACATAACTTGCAATGGGAGAATACTTCAAGGTGATGAGACC
CCCAATAATATGGGCACAATTAGAATTCACCCAAGGCTTGTGGGTGGAAA
AGGAGGTTTTGGATCAATGCTGAGAGCCATTGGTGCAAGAATTGAAAAAA
CAACCAATCATGAAGCATGTAGAGATTTGAATGGCAGAAGAATGAGAGAT
GTCAATAATGAAAAAAAGTTTGTTTTATTAGGGCTAGCTCAAAATGAAGG
TCACAGGTCATTATGTCATGCAGACTACAAACCAAAAAATTCTTAACACA
CTCGTGACATTATATTTCATAGTATAAATTAAAACCGTACATCCTGTGCC
CAAGTTCAGGAGTTGCCATAAAGTTATGGTAATAACCGGGAGGGCACATT
GCTATACATTGTAGCATAAATTTATGAAAATATGCAACGTTAACACAGAA
TATGCTATTTATAAGATTTAAAATGACAAAGATAATTTTTGTTACCACAT
TGTAATATAATGATAAAAATATTACAATAGACCAGGTGTTATATATACAG
CATGTAGTAAAAACCTAATTACTATATTTTTTAACAATTACAAGTATTTT
TCAACTATTTTCATTGTGTTTTGCAGTAATTAAAGCAGACTTGTTAATAC
TGACCTGTGACCTGTGGACCTGTGATCTGTGTTTTAAGCTAGCTAGTTCT
ATCAGTTTCTCCAAGAGATTATTTTATAGAGACATGTCCCTATTGTATTC
TTTCTGAAGGGAAGTCTTGAATGCCACATGTAAAAAAATGTAGTTTTAAA
ATAAATTGCTCTGCTTTATCATTTGCATTTCATCTTAAAAAACGGTGTGT
ATCAAAAATTGCACTTAATTAATTTTGCATCAAATGTTAGAAGCTTTCAG
AAAGGATCATTATAATCTATATTTTTATTTTTATTATATTAGGATAACAG
AATGGCTGCAGGAGCAAGATACCAAGGAGAAGGAAAGAATCCAGAAACAT
AACGACAGAATAGAGCGAACACTAAATCCCAAAATGAGATATGAGGATAA
GGACTACACCAAAAGTATACAAGGCAATGTTGACAAAGTCAATGAAGCTG
TCAAAATTGCAACTACCGTAAACAAAAATAAACCAGGTGAAAAGCGTAAA
ACCACAGAGCAAGTTTCTAATAGTAAAAAATCCAAAATGTGGTTGGGTCT
TGATGAATTAGACTCTGATGTAGATTCTGAGGTTTCGGAAAGTGACCCAG
AAGATGGTGAAATCACTAACAAACTTGCCAAAGAACCGAAGACAGATCAA
CAGACTAAAAAGCAAGAAGAATCCTCCGGAGATCCAGTAACAACTGCAAT
TGAATCTGATAAGGACAAGGTGCCTGAAGAGAAAAAATATGTAGAAAATA
AAGAGGAATCTTCGCCAAAACAAAATGAAGAAGTACAAAAGAAAGCTACG
GTAAGTTAATCACAAGGGTTTTTTTGTTACCTTAAAATCATTGGAAAACC
CCTAAAACTACTTAAATAAAGAAATTGGAATAAGAAGGGAAAATGACCTT
ATAATAGGGTAGGGATTTCAGATTTTCAATTATATTTAGTGATAATGTAC
CATAAGCAAGTAATAATTACAATTTAATTTGACCAACATAATCCAGAATT
TGTCTTTGTGAAGACACTGTAAAATGACTATCTTCTCTTGGAGTAGGCTG
ATTTATAAAGAGATGGGTATAAGCCCCTCTTCACACTAACAGCTCAATTT
ATTCTGTTAAGGATGAACTTTTTATATAATAACAAAAACAATTTATTTTA
ATTGCTTTGTTTATTTCTTCATTACAGGGTCCTGAATATTTATGTCTTGA
TGAATACAAAGATGCTGAGGAATTGCAATCAGTTGGTTTGGAACGTTTAA
AATCAGCTTTAATGTTTCATGGTATGAAATGTGGTGGCACATTACAACAA
CGTGCTCAAAGATTATTTCTTACCAAAGGAAAAAAATCTCTGAAAGATCT
TGACCCTTCTTTGTTTGCCAAAAAGAAATAATTGATATCTTAGTAACATC
ATTTTCTTTTGCCTATTTTCATTTCATTTTTGAAATCAGATACTGGGAAA
TTTGCTTTATCAATCAAAGATGTTTACTATTGCAAAAACGAGAACAATGA
AAAATTTCTTCGAATTTTTCAATTTGTTTATTTTGTAAAGCTCTACCTCA
CCCAATTTACTCTCCCAATAATTTCAAAGTAAATTTTTTATAATAAGAAT
TGTAACATGAATATGTGGAAACAGGAATTTTATTGAGGCTTGAATTCTAT
CATTGTTGTTACTTTATTTTTATTTATGAATAATGTTTTTTGTAGATATA
ATTTTATCCTTTCTCTTTTAAAATTTTAATGTACCG Coding sequence (CDS) from alignment at scaffold_133:395961..401946- >TCONS_00047675 ID=TCONS_00047675|Name=TCONS_00047675|organism=Clytia hemisphaerica|type=CDS|length=2790bp|location=Sequence derived from alignment at scaffold_133:395961..401946- (Clytia hemisphaerica)
GGTCCTGAATATTTATGTCTTGATGAATACAAAGATGCTGAGGAATTGCA
ATCAGTTGGTTTGGAACGTTTAAAATCAGCTTTAATGTTTCATGGTATGA
AATGTGGTGGCACATTACAACAACGTGCTCAAAGATTATTTCTTACCAAA
GGAAAAAAATCTCTGAAAGATCTTGACCCTTCTTTGTTTGCCAAAAAGAA
ATAAGATAACAGAATGGCTGCAGGAGCAAGATACCAAGGAGAAGGAAAGA
ATCCAGAAACATAACGACAGAATAGAGCGAACACTAAATCCCAAAATGAG
ATATGAGGATAAGGACTACACCAAAAGTATACAAGGCAATGTTGACAAAG
TCAATGAAGCTGTCAAAATTGCAACTACCGTAAACAAAAATAAACCAGGT
GAAAAGCGTAAAACCACAGAGCAAGTTTCTAATAGTAAAAAATCCAAAAT
GTGGTTGGGTCTTGATGAATTAGACTCTGATGTAGATTCTGAGGTTTCGG
AAAGTGACCCAGAAGATGGTGAAATCACTAACAAACTTGCCAAAGAACCG
AAGACAGATCAACAGACTAAAAAGCAAGAAGAATCCTCCGGAGATCCAGT
AACAACTGCAATTGAATCTGATAAGGACAAGGTGCCTGAAGAGAAAAAAT
ATGTAGAAAATAAAGAGGAATCTTCGCCAAAACAAAATGAAGAAGTACAA
AAGAAAGCTACGATGGATTATTACATAACTTGCAATGGGAGAATACTTCA
AGGTGATGAGACCCCCAATAATATGGGCACAATTAGAATTCACCCAAGGC
TTGTGGGTGGAAAAGGAGGTTTTGGATCAATGCTGAGAGCCATTGGTGCA
AGAATTGAAAAAACAACCAATCATGAAGCATGTAGAGATTTGAATGGCAG
AAGAATGAGAGATGTCAATAATGAAAAAAAGGTCCTGAATATTTATGTCT
TGATGAATACAAAGATGCTGAGGAATTGCAATCAGTTGGTTTGGAACGTT
TAAAATCAGCTTTAATGTTTCATGGTATGAAATGTGGTGGCACATTACAA
CAACGTGCTCAAAGATTATTTCTTACCAAAGGAAAAAAATCTCTGAAAGA
TCTTGACCCTTCTTTGTTTGCCAAAAAGAAATAAGATAACAGAATGGCTG
CAGGAGCAAGATACCAAGGAGAAGGAAAGAATCCAGAAACATAACGACAG
AATAGAGCGAACACTAAATCCCAAAATGAGATATGAGGATAAGGACTACA
CCAAAAGTATACAAGGCAATGTTGACAAAGTCAATGAAGCTGTCAAAATT
GCAACTACCGTAAACAAAAATAAACCAGGTGAAAAGCGTAAAACCACAGA
GCAAGTTTCTAATAGTAAAAAATCCAAAATGTGGTTGGGTCTTGATGAAT
TAGACTCTGATGTAGATTCTGAGGTTTCGGAAAGTGACCCAGAAGATGGT
GAAATCACTAACAAACTTGCCAAAGAACCGAAGACAGATCAACAGACTAA
AAAGCAAGAAGAATCCTCCGGAGATCCAGTAACAACTGCAATTGAATCTG
ATAAGGACAAGGTGCCTGAAGAGAAAAAATATGTAGAAAATAAAGAGGAA
TCTTCGCCAAAACAAAATGAAGAAGTACAAAAGAAAGCTACGATGGATTA
TTACATAACTTGCAATGGGAGAATACTTCAAGGTGATGAGACCCCCAATA
ATATGGGCACAATTAGAATTCACCCAAGGCTTGTGGGTGGAAAAGGAGGT
TTTGGATCAATGCTGAGAGCCATTGGTGCAAGAATTGAAAAAACAACCAA
TCATGAAGCATGTAGAGATTTGAATGGCAGAAGAATGAGAGATGTCAATA
ATGAAAAAAAGGTCCTGAATATTTATGTCTTGATGAATACAAAGATGCTG
AGGAATTGCAATCAGTTGGTTTGGAACGTTTAAAATCAGCTTTAATGTTT
CATGGTATGAAATGTGGTGGCACATTACAACAACGTGCTCAAAGATTATT
TCTTACCAAAGGAAAAAAATCTCTGAAAGATCTTGACCCTTCTTTGTTTG
CCAAAAAGAAATAAGATAACAGAATGGCTGCAGGAGCAAGATACCAAGGA
GAAGGAAAGAATCCAGAAACATAACGACAGAATAGAGCGAACACTAAATC
CCAAAATGAGATATGAGGATAAGGACTACACCAAAAGTATACAAGGCAAT
GTTGACAAAGTCAATGAAGCTGTCAAAATTGCAACTACCGTAAACAAAAA
TAAACCAGGTGAAAAGCGTAAAACCACAGAGCAAGTTTCTAATAGTAAAA
AATCCAAAATGTGGTTGGGTCTTGATGAATTAGACTCTGATGTAGATTCT
GAGGTTTCGGAAAGTGACCCAGAAGATGGTGAAATCACTAACAAACTTGC
CAAAGAACCGAAGACAGATCAACAGACTAAAAAGCAAGAAGAATCCTCCG
GAGATCCAGTAACAACTGCAATTGAATCTGATAAGGACAAGGTGCCTGAA
GAGAAAAAATATGTAGAAAATAAAGAGGAATCTTCGCCAAAACAAAATGA
AGAAGTACAAAAGAAAGCTACGATGGATTATTACATAACTTGCAATGGGA
GAATACTTCAAGGTGATGAGACCCCCAATAATATGGGCACAATTAGAATT
CACCCAAGGCTTGTGGGTGGAAAAGGAGGTTTTGGATCAATGCTGAGAGC
CATTGGTGCAAGAATTGAAAAAACAACCAATCATGAAGCATGTAGAGATT
TGAATGGCAGAAGAATGAGAGATGTCAATAATGAAAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047675-exon-scaffold_133-1575043694:401573..401946 | TCONS_00047675-exon-scaffold_133-1575043694:401573..401946 | Clytia hemisphaerica | exon |
| TCONS_00047675-exon-scaffold_133-1575043694:398130..398356 | TCONS_00047675-exon-scaffold_133-1575043694:398130..398356 | Clytia hemisphaerica | exon |
| TCONS_00047675-exon-scaffold_133-1575043694:396897..397404 | TCONS_00047675-exon-scaffold_133-1575043694:396897..397404 | Clytia hemisphaerica | exon |
| TCONS_00047675-exon-scaffold_133-1575043694:395961..396519 | TCONS_00047675-exon-scaffold_133-1575043694:395961..396519 | Clytia hemisphaerica | exon |
| TCONS_00047675-exon-scaffold_133-1510915933:401573..401946 | TCONS_00047675-exon-scaffold_133-1510915933:401573..401946 | Clytia hemisphaerica | exon |
| TCONS_00047675-exon-scaffold_133-1510915933:398130..398356 | TCONS_00047675-exon-scaffold_133-1510915933:398130..398356 | Clytia hemisphaerica | exon |
| TCONS_00047675-exon-scaffold_133-1510915933:396897..397404 | TCONS_00047675-exon-scaffold_133-1510915933:396897..397404 | Clytia hemisphaerica | exon |
| TCONS_00047675-exon-scaffold_133-1510915933:395961..396519 | TCONS_00047675-exon-scaffold_133-1510915933:395961..396519 | Clytia hemisphaerica | exon |
| TCONS_00047675-exon-scaffold_133-1491911889:401573..401946 | TCONS_00047675-exon-scaffold_133-1491911889:401573..401946 | Clytia hemisphaerica | exon |
| TCONS_00047675-exon-scaffold_133-1491911889:398130..398356 | TCONS_00047675-exon-scaffold_133-1491911889:398130..398356 | Clytia hemisphaerica | exon |
| TCONS_00047675-exon-scaffold_133-1491911889:396897..397404 | TCONS_00047675-exon-scaffold_133-1491911889:396897..397404 | Clytia hemisphaerica | exon |
| TCONS_00047675-exon-scaffold_133-1491911889:395961..396519 | TCONS_00047675-exon-scaffold_133-1491911889:395961..396519 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_133 | supercontig | scaffold_133:395961..401946 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR024974 | Sde2_N |
Blast
BLAST of TCONS_00047675 vs. Swiss-Prot (Human)
Match: SDE2 (Protein SDE2 homolog OS=Homo sapiens GN=SDE2 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.422e-33 Identity = 65/171 (38.01%), Postives = 104/171 (60.82%), Query Frame = 3
Query: 387 DYYITCNGRILQGDETPNNMGTIRIHPRLVGGKGGFGSMLRAIGARIEKTTNHEACRDLNGRRMRDVNNEKKITEWLQEQDTKEKERIQKHNDRIERTL-NPKMRYEDKDYTKSIQGNVDKVNEAV----------KIATTVNKNKPGE---KRKTTEQVSNSKKSKMWLG 857
++++ CNG ++ +T + + PRL GGKGGFGSMLRA+GA+IEKTTN EACRDL+GRR+RDVN+EK + EW+++Q +E E+ QK +R++R L PK + DY + +++ ++V ++ +++N+ + K +T S K+ WLG
Sbjct: 46 NFFVKCNGALINTSDTVQHGAVYSLEPRLCGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAASSKMVSAEISENRKRQWPTKSQTDRGASAGKRRCFWLG 216
The following BLAST results are available for this feature:
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