TCONS_00047625 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047625
Unique NameTCONS_00047625
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3669

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047625 ID=TCONS_00047625|Name=TCONS_00047625|organism=Clytia hemisphaerica|type=transcript|length=3669bp
GTATTTTTAAACCagttttcttttaattatttcttttagaGATTTCCATT
ACCTCAACTTGAAGGTGACTTTCGGATCAAACTGAAAAAAAGGAGACAAA
GTATAGCATTCAAAAAAGGACCAAGCTGGCATACTAGACATCTCACAGTC
TTACTGAATGAGTTGCtaatatctgaaaatgaatatgcttTTCATACTGG
ATCTATGCTGCACATTGTTCAACTTGAAAATATAAACATATATGATGGAA
GTAATTACAAAGAATGGACCATTCATATCCGGTTAATTGAAGGTGTGAAT
TTCAATGGCTCCACAGAATTCTTTATTGCATTCCCAAGTGAGAAGTTGTT
CAAAGATTGGATGAAAAATCTTCAATACTCCAAAGATTACTGGTATAAGA
AGGAGAATATGCCTGATTTGAGCAAAAAGGTCGTCAGCAGTAATGATAAT
GACTACTTCAAAGCAAGTTTGACATTGTACAACAATATTTCTGCTGGAGT
TATAATACATAAGAATTCAACACTGAAAGAATTGGCACGAGAAGTCAATA
TGTTTTGTCACTGTAAAATTTGTATTGTGGACAGACGAGAAGCGCAATTG
TTTGCTGTTGACAAAAATGGCAAAGTCCAGTTGTTGAAAGAGGAGGAAAA
GATTAATGGTTATGTGAATTCTGGTTGTGAGCtatttttgatggaaaaaa
caaaagaatcaagATTATTGGTGATTTTCTTTGAAGAAGAGGACGGAAAA
GAATCATTTGTTTGTGGAACTGTTTATCATAACACAAAAGCAAAAGATAT
TTGTCAAaatcCTAAGAATAATGAAATTCCTTTCATTCGTGGCAAAATGC
GATCATATGACCCACAGGGTGATGTTACTTTGAACTATGTCAATCGTGAA
AAAGATACTCCTTtgggtgaaaaagaaaaaccaacTACGTTCTTCTACGA
TGGGAAAGGGAACTGGAAGGATTCTACAGGAATATTGCTgatcagaaaaa
acaaacaatttattGAGGATAGATCAAGAACACATTCTATGACATCACAA
GAGTTTAATATATATCAAGAAGGCCgtgaaaagGCACAGAAAGTGATCAA
TTCTCAGAGGATCAAAGACGCACAAGAAGCTCTGTCTAAAAAAGAAGATA
TCTCACCATCTCCAAGTATGGGCTCAATCAGTGAAGCAAAGGAAGATACA
TCAATATGTTGGGGAGCTTTCACCGACCCTGATACATGTGGATATAATTT
TAATCCCATCATGAGTGTATTTGAATCGAGTATCTCAGATGATGACACTA
CTTCCCAATCAATTGAGGATTATTTCGGAGATGACAATGATTCGCATGAT
CTGCCAGCTGACACCAACGAAGATACAACATCTGTTGCTGATATGGAGGC
TGAAGCTCAAAGGCTCGACAGCTCTATCAAAATGAAGGAAACTGGAGCCA
TAATTCCAACTAATGTTGCAGCAAACTctcaaattgaaaatgaaattgcc
GTTGAAAATAATGTCAATGCTGTTGATAGTCCAGATGGGCCTGAAGAATC
ACCAATACTTGATGCACCTAATTCGCCAGAAGCTTTAATCAAACAGTACC
AAGATGTGGTACTGACTTCAGTTGAGCACAGCATTGATGAACCAAATGAG
ACGAGAGAAGACTCCAGTCAAACCAAACCGCAGAATCAACCGAAATTGCA
GGATCCTCCTATTGAAGTAACTAATCAACCAGCACCAATTATCTCTACCC
CAACAGCAAAACCTATTCTCATACCAACAATCAAGACCATCACATGTGAG
CTATGTGATGATTACTCAAAATCAAAAccacaaaatatttcatctcatta
tGTTTTAGATGCTATCACAAACACATCCCAAGATAGTTACATTTGCTTAA
GTGGTGTACACCTGTTGAAAAGAGGTCAGCAATACAGTCTACAAGATGGT
TGTGAAGTTAAAGCAGGAATCAAAGATACAGAATTGATAGATGccgtcaa
aatcaaaaattctgtTAAACGTAAATTAGGCCCTTTTACATGTTTATTTG
TACCAAGCGTTCGGGGTAAAGGCTATTGGCTGATCAGACAAACGGAGGAT
TTGGAAGATTCAAAACATCAACCAGAGCTGAAAGAACCATCTTTTCCACC
CCCTAAGGAAGTTCTTATTACGGAACCGAGTGACCAGGTTGTGCATGTAT
CAAGCCTCCCTCAGAATAATTCATCAAGTGAAGACGAAATCAATACAgac
gaaaatcaaaatcaaacgcAAGCAGCAGTTGACTCTCAGAGAATGTTTCA
ATCCACAGCTACTGAAATGTTTAAAGGTGCACTTGTTAGTGCTTCTGATG
CCTTTAAGAAcggtgaaaaatatttcaataatgtTTTGGAAGGCCGACGA
CAAAGTACTGTGTCACTTTTGCAAGAAGATAAGAACATTCTGAGAGATGA
GTTTGTTTTGGTTGGCGAAAGATTCGTTAAACCTTTAAAGAACACTGTCT
TCACTATTTGCACTCAAATGGAAAATGTTAATGTATGTCAACAGAAGAAG
CTTGGTGACGACTTTGAGAATCAACCAATTGGATGGCTCGTTCGGGGAGA
ATTTTGTACCCTTATCGCAGAATTTCTTAAAATTGGTCTCAAAGAACAAA
CCAACGTTTTCAAACGGTTTTTCGCAGAACAGAAACCAATATCACTCTGG
GATGTTGCTCGTGAATTTGCATCTGCTTTTAAAATATACGAGTTTGATGG
TGTTTTGAGAAGTATCAAGGATGCTAATTTGAGATCTGACGATGAGCGGT
TCCGAGCTTTCTTTTGTCAGTTATTAAATCGTAGCGATTCTGACGGTACC
GATAAATTGATTGTCAGCTTTTTCCAAATGTTACCACTTATGACTAACAA
GTTGGAGAAATTTTATCACGAAGATTCTTTTTGGAGAATGAGTTATTCAT
CTGGGTTTAGTACCTTACAAGATGAGATTATTTTGTCTATGAGACACTTC
AATGGTTGGCCATTTGAATTACATTTAGATTTTGAGAAGCGATTTAACCC
TACTATACCGACAAAACGTGAAATTGTAGCTGCAAAGAAAAGAGAAGAAC
AAATTAACCAAGACAGTCTTCTAATGATGgagtaaatttttgaaattgtt
ttttttttataatgaaactttgtgtaaactttaaaatgaaacaatgaAGC
TTGAATTTAAAATTGTACTTGaatttgatttatatatttgataaaatgta
GTGGGATTGGATTGGGTTCAAAGATGCTGGTAAATCATTATTTGTTTCca
ttgtttcaaattttttgttcagttgatgttttttatataaaatttgaTTC
CCAAAGTACCATATATTGTTTGTAAATGAATTATTCaatttaaatagttt
tatatttgtaaaatttaacGTTTTTAATTTTCATCATTTATACCTTTTCT
ACAGAATTTTCCATagcatttcaattttttttttaattttatattatagT
TATGATTGAAAGATgtttattaaaggttttgtttttacataagtgttcgc
gtttcatatcagacacatatttcatattggGACagtggtcgtgttcagac
ctgaaagtttaagtttaaggtttaaatagtactttgttgatatgggaatt
caattataatcacttttct
Run BLAST on NCBI

transcript from alignment at scaffold_133:150031..162394+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047625 ID=TCONS_00047625|Name=TCONS_00047625|organism=Clytia hemisphaerica|type=transcript|length=12364bp|location=Sequence derived from alignment at scaffold_133:150031..162394+ (Clytia hemisphaerica)
GTATTTTTAAACCagttttcttttaattatttcttttagaGATTTCCATT
ACCTCAACTTGAAGGTGACTTTCGGATCAAACTGAAAAAAAGGAGACAAA
GTATAGCATTCAAAAAAGGACCAAGCTGGCATACTAGACATCTCACAGTT
agtatctttatttttctaacaAAATGTTTATTAGAGGTCTCTGTTTGAAA
TAAGAGGGTAGCCAACAAACTTACAAGTGTATCATTTTAAAACTCAATCA
ATGTTACttgttttgaacttgaaaataGAGTTGGCAATAAACAATTTTTT
AGGCTCTTTTGACTTATGTCTTAATTACGGTACAAAATGGGTTTATATGG
GTTTAGTTTGACTATCAGTCAGAAGActgtagcatgaaggtagagcgtCC
AGCTTCAGTGCACAAGGTTgagggttcgatccccagccgggtcaagATGA
TGATGATGCCTCTCtgtttgatgctcagcaactaaagagacggattaagg
gtaagtggagaaatccccTACCTTTTGTACTTtcaggtagacagctatac
AAAAAGacagccttcgggtcgccctcgactgcgtctcaaacttacttact
tacttttcagtcagaaaagaagaaaaaaacaaactagTTTTTGGAAGTGA
AGATAATATTTTTTGGGACTCTCCTACCTGTGTTTTTTTGGATGCGCATT
AGTGAATCCCTCATAATTACTCATAGATCTTGTTAGATATATTATTTATG
ActcatttgaattttttttactttgcctTAGGTCTTACTGAATGAGTTGC
taatatctgaaaatgaatatgcttTTCATACTGGATCTATGCTGCACATT
GTTCAACTTGAAAATGTAAGGTTATTTAGATTAACACAACTATTGTATAA
ACTAACTGTAAAAAATGTAGATTTCTCTGCTTATCACTATGTTTCTTTGT
TTCAGTTACTCTGTAGTCATGGTATTGACAAATGCAGATTAAGTCAAAAA
TACCCCTTTAGATAAAATTTGCAAATCTGTAGATCAATTTGTATTATTCT
TGAAAAGAGCAGAACAAACATGTACCAAAAGGAGCATTCATAGAGAGTTG
TCAAATAAACTGCTTTTGTTACTTTTTGATACAGATAAACATATATGATG
GAAGTAATTACAAAGAATGGACCATTCATATCCGGTTAATTGAAGGTGTG
AATTTCAATGGCTCCACAGAATTCTTTATTGCATTCCCAGTAAGATTTTC
AGTATATTTGTATGTTATTATTTTAAACTATGATCTTTATTTTAACATAT
ttcttcagccaaaattttatgactttcATCTGTTTTGAGAAACGAGCATC
CTTTTAAACATGATTTGCTCCAATAGCTCAAGCAGTGCTGAACAATCCAC
TCTTGACAATTAGTGCACTAACTGAACAACCCATTAAATACAATTTGGAA
TCTTGATTTCAGGATTTTTATAACAAGAAAAGTGCCTTTATTGAATAATT
GATGCATTTTTACGTACTGATATTCATTTTATTGAGCCTGATTCTATGAC
TTTGGTAAGTTAagatcaattttaaattttctactATCAACAATACTATT
TTAAGGAATCACTCAGAATCACTTTCTATTTCTTAAAATTAGAGTGAGAA
GTTGTTCAAAGATTGGATGAAAAATCTTCAATACTCCAAAGATTACTGGT
ATAAGAAGGAGAATATGCCTGATTTGGTATGATTTTGTTTCGATAATGCA
GTGTTGATAGTTCTTTCATATTAGACAGATCTGTTTCAGGATGGTTTTTA
TATAGAGGCTTTACTATCTTTTATACTTGgctaaattttgataaaaattc
aagaatttcaaaatctatttggtatagttttattaaaaaatcaaaaggct
ATGTCATCGTTAGTACAAACATAGAATTGTGCTTTCATATAATAGTTTGT
ATTGACCACTGTTTCAAAGTGTTGTTGTGATCACTTTTTCTAAGACCACT
GATTATTTGATTTTGGTTTCTTTTTCAGAGCAAAAAGGTCGTCAGCAGGT
GAACAATTTTGATTCATTGATTTTTATATTTGGTATCTTAAAGGGGCTAA
TCTtagtgggaactaattttcactgTTTGCCCGAACCGAAAAAATGTTTG
GAAGctcaaaaccgcaaaaattaattgtcacaaaaaatttaagaaaattt
cataactgaaattaattgtttgattttttgaataaaatgtgtatttcatt
ttattaacaattttattgtttaagaAGATGCTTGAGTGAAACTTGAACAG
GGCTTTTCTGATATCACTTATTAATTGAATAGTtcccttaaccctttaag
tgtcaATGTCGtgtatatcagacatgggctatgtaggagggcaaAGCCCT
CCTGTACTGCCTGCCCAATTTGAGTTAGaattcgtcatttttggtctcgt
aggaattggattgggctttatggtcaagcaaaaacagaatcaaaagtgag
tctttccagcgagattataagccaaaaagtcaaaaaatgcaaacatttga
caaaaatccacttttttaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCACAA
GGTTgagggttcgatccccagccgggtcaagATAATGATGATGCCTCTCt
gtttgatgctcagcaactaaagagacggattaagggtaagtggagaaatc
cccTACTTtcaggtagacagctatacAAAAAGACTGCGTctcaaacttac
ttacttacttatcagtcagaaaagaaaaaaaaacaaactagtttttcagg
tttttggaAGTGAAGATAATATTTTTTGGGACTCTCCTACCTGTGTTTTT
TTGGATGCGCATTAGTGAATCCCTCATAATTACTCATAGATCTTGTTAGA
TATATTATTTATGActcatttgaattttttttacttataCCTTAGGTCTT
ACTGAATGAGTTGCtaatatctgaaaatgaatatgcttTTCATACTGGAT
CTATGCTGCACATTGTTCAACTTGAAAATGTAAGGTTATTTAGATTAACA
CAACTATTGTATAAACTAACTGTAAAAAATGTAGATTTCTCTGCTTATCA
CTATGTTTCTTTGTTTCAGTTACTCTGTAGTCATGGTATTGACAAATGCA
GATTAAGTCAAAAATACCCCTTTAGATAAAATTTGCAAATCTGTAGATCA
ATTTGTATTATTCTTGAAAAGAGCAGAACAAACATGTACCAAAAGGAGCA
TTCATAGAGAGTTGTCAAATAAACTGCTTTTGTTACTTTTTGATACAGAT
AAACATATATGATGGAAGTAATTACAAAGAATGGACCATTCATATCCGGT
TAATTGAAGGTGTGAATTTCAATGGCTCCACAGAATTCTTTATTGCATTC
CCAGTAAGATTTTCAGTATATTTGTATGTTATATAAACTATGATCTTTAT
TTTAACATATttcttcagccaaaattttatgactttcATCTGTTTTGAGA
AACGAGCATCCTTTTAAACATGATTTGCTCCAATAGCTCAAGCAGTGCTG
AACAATCCACTCTTGACAATTAGTGCACTAACTGAACAACCCATTAAATA
CAATTTGGAATCTTGATTTCAGGATTTTTATAACAAGAAAAGTGCCTTTA
TTGAATAATTGATGCATTTTTACGTACTGATATTCATTTTATTGAGCCTG
ATTCTATGACTTTGGTAAGTTAagatcaattttaaattttctactATCAA
CAATACTATTTTAAGGAATCACTCAGAATCACTTTCTATTTCTTAAAATT
AGAGTGAGAAGTTGTTCAAAGATTGGATGAAAAATCTTCAATACTCCAAA
GATTACTGGTATAAGAAGGAGAATATGCCTGATTTGGTATGATTTTGTTT
CGATAATGCAGTGTTGATAGTTCTTTCATATTAGACAGATCTGTTTCAGA
ATGGTTTTTATATAGAGGCTTTACTATCTTTTATACTTGgctaaattttg
ataaaaattcaaGAATTGCAAAATCTATTTGGTatagttttattaaaaaa
tcaaaaggctATGTCATCGTTAGTACAAACATAGAATTGTGCTTTCATAT
AATAGTTTGTATTGACCACTGTTTCAAAGTGTTGTTGTGATCACTTTTTC
TAAGACCACTGATAATGTATTTGATTTCGGTTTCTTTTTCAGAGCAAAAA
GGTCGTCAGCAGGTGAACAATTTTGATTCATTGATTTTTATATTTGGTAT
CTTAAAGGGGCTAATCTtagtgggaactaattttcactgTTTGCCCGAAC
CGAAAAAATGTTTGGAAGctcaaaaccgcaaaaattaattgtcacaaaaa
atttaagaaaatttcataactgaaaataattgtttgattttttgaataaa
atgtgtatttcattttattaacaattttattgtttaagaAGATGATTGAG
TGAAACTTGAACAGGGCTTTTCTGATATCACTTATTAATTGAATAGTtcc
cttaaccctttaagtgtcaATGTCGtgtatatcagacatgggctatgtag
gagggcaaAGCCCTCCTGTACTGCCTGCCCAATTTGAGTTAGaattcgtc
atttttggtctcgtaggaattggattgggctttatggtcaagcaaaaaca
gaatcaaaagtgagtctttccagcgagattataagccaaaaagtcaaaaa
atgcaaacatttgacaaaaatccacttttttaagattttttgaccatttt
tggtcaacaagtgatccaagaacctccaaatttgaccctgatttacttga
ttctgtcctccagcgaggagcctgactgctttaattcccttaCCTACCCC
ACCTCTACCGCCGCCCAACCCACCCTTAacaagcttctaactccttctag
atccggagatataagcctccaaagtttgaactagccattttctttaaaag
acttagaaaaaaatgaccgtggcacttaaagggttaactcATTTTCCAAC
AATAATTTGTGAAATCTATGAAGTTCAAGTTCAAGAGAAAAAACATTCTG
ATTCATTATCTTTTGCATGTATTTTTTTAGTAATGATAATGACTACTTCA
AAGCAAGTTTGACATTGTACAACAATATTTCTGCTGGAGTTATAATACAT
AAGAATTCAACACTGAAAGAATTGGCACGAGAAGTCAATATGTTTTGTCA
CTGTAAAATTTGTATTGTGGACAGACGAGAAGCGCAATTGTTTGCTGTTG
ACAAAAATGGCAAAGGTAAGATTGTGAAGTAATTAGGTTTCTATTAATAC
TCCATTATAATATGGTGCAAGATCATCCCAAGAAATTTCTATAGTGTGTC
CTGAAAAAAGAACAGGTtatatataaatcaaaatcatttatcTTACTCCA
TTGTGAATTATTACCTTAGAAGAAAACTCTTTGctcaatcaaaatttaat
caATTCCCAAGGAAAATAAAATGCTtacgaaaaaaaagaaatcaattaAA
TGGGTTTTTGAAAATGGCATAATTTATTAAGTTCTATTTCGGTCTTCTTT
AGATACTCTGTATAAATTTCTGctgaagaaaattaattttgtatGACTTC
CctccaaattttctttgatcATATTTGTTGATCAGATCTATTGAACCGAA
TTGAAagctttttgaaagatttttgagcatTGGAACATACTCAAactaaa
aaatgtttcattttggttttgcaattaaatttaaaatttgattgaCTTTC
ACTTCCTTTTATGTGACATTGTCTGCTCTTCTATATATTGTACAataatt
attcatttttttcattgccTGTGTGCAGTCCAGTTGTTGAAAGAGGAGGA
AAAGATTAATGGTTATGTGAATTCTGGTTGTGAGCtatttttgatggaaa
aaacaaaagaatcaagAGTAAGATTTGtcattttgatgattttcaaaTGA
ATCGTCTTTTTTTTAACTGCATCAACTGAAAATTGATGCAAAAGGAAAAC
TGCATATAGATTTTATTGAAATTGATTATGTATTTTGAAACCCAGCTTTC
TCATTTACTATTTATGCTATAAAACTTGATTTGAATAAAGCCACAAGCTT
CCGTCTTTTTTACACTTTCaaataagattttaaaaatcttgataaCTATT
TTTGGTCACATTTTACCTAAAACTTTGAATTTAAGGCTTTCTACTAAAAT
TAACTTTGAGCTTTACTAAAATATTGTTCCGTttaattcaatttcaaatt
cagtttTTCTCAGTTAAGCCTGACTTATTATGTGTTTCAATTCATTTCCA
CAGTTATTGGTGATTTTCTTTGAAGAAGAGGACGGAAAAGAATCATTTGT
TTGTGGAACTGTTTATCATAACACAAAAGCAAAAGATATTTGTCAAGTAA
GATTTAATTTCATGATGGATTGAACTTTACGCCAAActaaaattatcatt
ttgaatGTTATGCGAGACCAAAACCGAGCAAGTTGAAAAGTACGGTCCCC
TTGGGAGAAGaataatcaaaataagagtTTTTAAGGCGTTGgagcaatgc
aacatgctccatcccactaACACAAGAGAAAAAGTTTGTGTCCCATGGCT
TCTTTTaatgtttcatgggacaaaaagcgAGGGAAATACCCGAAGGACat
gctgattttgtccctgggaaaAAAGTGAGAcacacaaatgttattaaatc
gatttcacttttattgataGAAACAAAAATGGGGTGGGACACAAGAAAGC
GTTTctggttggtgggatggagcatgttgcattgcaccaacgcaaaaAGA
ATTCTCGTGTTCCTAAGCCTTCAGGGGGGGGTGACGTTCGTAAAATAAAT
TATGCATCAGACAAAATACAAATAAGATTTTATCTTGgtaaattttttgg
tatttggGTAAACAATAGTTGTAACAAGTTGTAATTGCATCGTTTTCTCT
GTTGCTTCTTGTTTGTTATAGCAATAGTATGTATGGTCCTTTTTTCATTG
AtaaccttttttttattttagaatcCTAAGAATAATGAAATTCCTTTCAT
TCGTGGCAAAATGCGATCATATGACCCACAGGGTGATGTTACTTTGAACT
ATGTCAATCGTGAAAAAGGTACACTCGAAATGATGCTTTTTATTAAGTAT
TTTTGCCTGTAGAAAACATAATGATATAATAAAACTTATGCACCATATCC
TTGCTGGCATAATTAAACTAAATATTTTATTATATCAAACTAAATCACTC
TTAATCTGGTTGGCTAATTATGTTTTCCAGTCTCCAAAATGAGAACCTCC
CCTATTATTGATTATTATTTACTAACACTGACAAATGTATAACTTCTTTT
TCCTTTAATAGTTTTCTTTTTAGATACTCCTTtgggtgaaaaagaaaaac
caacTACGTTCTTCTACGGTAAAAAAATTTAACTAAATTTTACCACAACA
TAATTTATTTAGTCAAAGGTTTTCTGCATTTCATCATCACTGAGAAAGCA
CATAACAATGCTAATGTGTTTCACCAATAAACTTTGGTTCAGAAttggct
gttcttaattttttggacttttcttgcttaaaatgttcttacaatgttct
ttaACATGATTTAAATCTGTTAAGTTCAGtgttaaaatcaatttttgcca
attttcagcctcgtgttcttataaaattgtttttatattaaaaaaaagca
tATATCTCGTATAAACTTTTTTTACCTTTATACCTTTAGATGGGAAAGGG
AACTGGAAGGATTCTACAGGTACACATTTTCAACTGCAAAGTTATCATTA
TTTTTAGTAAAATCCAGCCAGAATTTACTCGTTTTATACTTTACAGTAGA
GTTATTTATAAATTATGTCTGCATAACTGGAACCTCTGCAATTGAAAGTC
TACTTAACCTACAGGTTTTCTGGTTCCTTCAGTTaataatgccttataaa
ccagaCTCCATAAGTCGAACAAATTTACGTTCGTGTTGTGCATGTTCAAG
TAATAACGACTTCACTACATTAGAAAATGTTTGTACTATTTTTAGTCGTC
TAAAGGGGCTGTGTAATAACACATGTCTATATTGTTTTTTATACATCTCT
TGATCTAAAAATCaagattgatttaaaaattattgTATCTATTTAGGAAT
ATTGCTgatcagaaaaaacaaacaatttattGAGGATAGATCAAGAACAC
ATTCTATGACATCACAAGAGTTTAATATATATCAAGAAGGCCgtgaaaag
gtttgttttttattgcaatattcATGATACCTTATCCTATAATATTTTTG
TCAGACAagggaaatttgaaattaactCAATCCAACCCAAGAAGTAAAAA
ATTAAATCTTCTGGGATTTTgtcaaaaaagcttcaaaattcattgaaatt
gtttaaATTTAGACAAAATAGAAGAGCCTATCCCCAAAATTAGCTCTCGC
TAAAACTATAAAACTTAAAATCCCCCAAAATGAGATTGTACCAAAAGTCT
TCAAGATTAATCCTGCTCACCAAATTAAGTAAAGTAAATAAACTGGAGTC
AAGTTCTtattatttgaattttcttttcaaattcacCCTTCTCAATTTCT
TTTGCTTAAGATACATAACATTTTTAAGGACCTATTAGTGACAGGCGTGG
TTacagaaaatattcaaaagtaATGACGGACGGAGAATTTTTCTTTTGCT
AATTATCATCTTATTTatactttttacttttcatttgGGAGTAATATTGt
gcttaaaaaaagaattttgagtaGCCCAAATGCCGCTGAGAGAATTTGCA
GCAATGATGAGTGAGATATAGATGGCCTGCCCTACTGTGTGAcattataa
tataaaaataatataatattatattataattATGAAGTGTATTTACCTGT
GTACTGTCTGTTATTTCGTTCTAGGCACAAAAAGTGATCAATTCTCAAAG
GATCAAAGACGCACAAGAAGCTCTGTCTAAAAAAGAAGATATCTCACCAT
CTCCAAGTATGGGCTCAATCAGTGAAGCAAAGGAAGATACATCAATATGT
TGGGGAGCTTTCACCGACCCTGATACATGTGGATATAATTTTAATCCCAT
CATGAGTGTATTTGAATCGAGTATCTCAGATGATGACACTACTTCCCAAT
CAATTGAGGATTATTTCGGAGATGACAATGATTCGCATGATCTGCCAGCT
GACACCAACGAAGATACAACATCTGTTGCTGATATGGAGGCTGAAGCTCA
AAGGCTCGACAGCTCTATCAAAATGAAGGAAACTGGAGCCATAATTTCAA
CTAATGTTGCAGCAAACTctcaaattgaaaatgaaactgCCNgaccggcg
tgcgacgccgggtaccggctagtaatATTATAATTATGAAGTGTATTTAC
CTGTGTACTGTCTGTTATTTCGTTCTAGGCACAGAAAGTGATCAATTCTC
AGAGGATCAAAGACGCACAAGAAGCTCTGTCTAAAAAAGAAGATATCTCA
CCATCTCCAAGTATGGGCTCAATCAGTGAAGCAAAGGAAGATACATCAAT
ATGTTGGGGAGCTTTCACCGACCCTGATACATGTGGATATAATTTTAATC
CCATCATGAGTGTATTTGAATCGAGTATCTCAGATGATGACACTACTTCC
CAATCAATTGAGGATTATTTCGGAGATGACAATGATTCGCATGATCTGCC
AGCTGACACCAACGAAGATACAACATCTGTTGCTGATATGGAGGCTGAAG
CTCAAAGGCTCGACAGCTCTATCAAAATGAAGGAAACTGGAGCCATAATT
CCAACTAATGTTGCAGCAAACTctcaaattgaaaatgaaattgccGTTGA
AAATAATGTCAATGCTGTTGATAGTCCAGATGGGCCTGAAGAATCACCAA
TACTTGATGCACCTAATTCGCCAGAAGCTTTAATCAAACAGTACCAAGAT
GTGGTACTGACTTCAGTTGAGCACAGCATTGATGAACCAAATGAGACGAG
AGAAGACTCCAGTCAAACCAAACCGCAGAATCAACCGAAATTGCAGGATC
CTCCTATTGAAGTAACTAATCAACCAGCACCAATTATCTCTACCCCAACA
GCAAAACCTATTCTCATACCAACAATCAAGACCATCACATGTGAGCTATG
TGATGATTACTCAAAATCAAAAccacaaaatatttcatctcattatGTTT
TAGATGCTATCACAAACACATCCCAAGATAGTTACATTTGCTTAAGTGGT
GTACACCTGTTGAAAAGAGGTCAGCAATACAGTCTACAAGATGGTTGTGA
AGTTAAAGCAGGAATCAAAGATACAGAATTGATAGATGccgtcaaaatca
aaaattctgtTAAACGTAAATTAGGCCCTTTTACATGTTTATTTGTACCA
AGCGTTCGGGGTAAAGGCTATTGGCTGATCAGACAAACGGAGGATTTGGA
AGATTCAAAACATCAACCAGAGCTGAAAGAACCATCTTTTCCACCCCCTA
AGGAAGTTCTTATTACGGAACCGAGTGACCAGGTTGTGCATGTATCAAGC
CTCCCTCAGAATAATTCATCAAGTGAAGACGAAATCAATACAgacgaaaa
tcaaaatcaaacgcAAGCAGCAGTTGACTCTCAGAGAATGTTTCAATCCA
CAGCTACTGAAATGTTTAAAGGTGCACTTGTTAGTGCTTCTGATGCCTTT
AAGAAcggtgaaaaatatttcaataatgtTTTGGAAGGCCGACGACAAAG
TACTGTGTCACTTTTGCAAGAAGATAAGAACATTCTGAGAGATGAGTTTG
TTTTGGTTGGCGAAAGATTCGTTAAACCTTTAAAGAACACTGTCTTCACT
ATTTGCACTCAAATGGAAAATGTTAATGTATGTCAACAGAAGAAGCTTGG
TGACGACTTTGAGAATCAACCAATTGGATGGCTCGTTCGGGGAGAATTTT
GTACCCTTATCGCAGAATTTCTTAAAATTGGTCTCAAAGAACAAACCAAC
GTTTTCAAACGGTTTTTCGCAGAACAGAAACCAATATCACTCTGGGATGT
TGCTCGTGAATTTGCATCTGCTTTTAAAATATACGAGTTTGATGGTGTTT
TGAGAAGTATCAAGGATGCTAATTTGAGATCTGACGATGAGCGGTTCCGA
GCTTTCTTTTGTCAGTTATTAAATCGTAGCGATTCTGACGGTACCGATAA
ATTGATTGTCAGCTTTTTCCAAATGTTACCACTTATGACTAACAAGTTGG
AGAAATTTTATCACGAAGATTCTTTTTGGAGAATGAGTTATTCATCTGGG
TTTAGTACCTTACAAGATGAGATTATTTTGTCTATGAGACACTTCAATGG
TTGGCCATTTGAATTACATTTAGATTTTGAGAAGCGATTTAACCCTACTA
TACCGACAAAACGTGAAATTGTAGCTGCAAAGAAAAGAGAAGAACAAATT
AACCAAGACAGTCTTCTAATGATGgagtaaatttttgaaattgttttttt
tttataatgaaactttgtgtaaactttaaaatgaaacaatgaAGCTTGAA
TTTAAAATTGTACTTGaatttgatttatatatttgataaaatgtaGTGGG
ATTGGATTGGGTTCAAAGATGCTGGTAAATCATTATTTGTTTCcattgtt
tcaaattttttgttcagttgatgttttttatataaaatttgaTTCCCAAA
GTACCATATATTGTTTGTAAATGAATTATTCaatttaaatagttttatat
ttgtaaaatttaacGTTTTTAATTTTCATCATTTATACCTTTTCTACAGA
ATTTTCCATagcatttcaattttttttttaattttatattatagTTATGA
TTGAAAGATgtttattaaaggttttgtttttacataagtgttcgcgtttc
atatcagacacatatttcatattggGACagtggtcgtgttcagacctgaa
agtttaagtttaaggtttaaatagtactttgttgatatgggaattcaatt
ataatcacttttct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030337XLOC_030337Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047625-exon-scaffold_133-1491911889:150031..150177TCONS_00047625-exon-scaffold_133-1491911889:150031..150177Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1510915933:150031..150177TCONS_00047625-exon-scaffold_133-1510915933:150031..150177Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1575043694:150031..150177TCONS_00047625-exon-scaffold_133-1575043694:150031..150177Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1491911889:150812..150895TCONS_00047625-exon-scaffold_133-1491911889:150812..150895Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1510915933:150812..150895TCONS_00047625-exon-scaffold_133-1510915933:150812..150895Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1575043694:150812..150895TCONS_00047625-exon-scaffold_133-1575043694:150812..150895Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1491911889:151165..151269TCONS_00047625-exon-scaffold_133-1491911889:151165..151269Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1510915933:151165..151269TCONS_00047625-exon-scaffold_133-1510915933:151165..151269Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1575043694:151165..151269TCONS_00047625-exon-scaffold_133-1575043694:151165..151269Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1491911889:151673..151756TCONS_00047625-exon-scaffold_133-1491911889:151673..151756Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1510915933:151673..151756TCONS_00047625-exon-scaffold_133-1510915933:151673..151756Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1575043694:151673..151756TCONS_00047625-exon-scaffold_133-1575043694:151673..151756Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1491911889:152059..152078TCONS_00047625-exon-scaffold_133-1491911889:152059..152078Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1510915933:152059..152078TCONS_00047625-exon-scaffold_133-1510915933:152059..152078Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1575043694:152059..152078TCONS_00047625-exon-scaffold_133-1575043694:152059..152078Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1491911889:155461..155645TCONS_00047625-exon-scaffold_133-1491911889:155461..155645Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1510915933:155461..155645TCONS_00047625-exon-scaffold_133-1510915933:155461..155645Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1575043694:155461..155645TCONS_00047625-exon-scaffold_133-1575043694:155461..155645Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1491911889:156209..156297TCONS_00047625-exon-scaffold_133-1491911889:156209..156297Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1510915933:156209..156297TCONS_00047625-exon-scaffold_133-1510915933:156209..156297Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1575043694:156209..156297TCONS_00047625-exon-scaffold_133-1575043694:156209..156297Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1491911889:156684..156776TCONS_00047625-exon-scaffold_133-1491911889:156684..156776Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1510915933:156684..156776TCONS_00047625-exon-scaffold_133-1510915933:156684..156776Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1575043694:156684..156776TCONS_00047625-exon-scaffold_133-1575043694:156684..156776Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1491911889:157402..157498TCONS_00047625-exon-scaffold_133-1491911889:157402..157498Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1510915933:157402..157498TCONS_00047625-exon-scaffold_133-1510915933:157402..157498Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1575043694:157402..157498TCONS_00047625-exon-scaffold_133-1575043694:157402..157498Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1491911889:157754..157798TCONS_00047625-exon-scaffold_133-1491911889:157754..157798Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1510915933:157754..157798TCONS_00047625-exon-scaffold_133-1510915933:157754..157798Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1575043694:157754..157798TCONS_00047625-exon-scaffold_133-1575043694:157754..157798Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1491911889:158120..158149TCONS_00047625-exon-scaffold_133-1491911889:158120..158149Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1510915933:158120..158149TCONS_00047625-exon-scaffold_133-1510915933:158120..158149Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1575043694:158120..158149TCONS_00047625-exon-scaffold_133-1575043694:158120..158149Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1491911889:158527..158630TCONS_00047625-exon-scaffold_133-1491911889:158527..158630Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1510915933:158527..158630TCONS_00047625-exon-scaffold_133-1510915933:158527..158630Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1575043694:158527..158630TCONS_00047625-exon-scaffold_133-1575043694:158527..158630Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1491911889:159809..162394TCONS_00047625-exon-scaffold_133-1491911889:159809..162394Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1510915933:159809..162394TCONS_00047625-exon-scaffold_133-1510915933:159809..162394Clytia hemisphaericaexon
TCONS_00047625-exon-scaffold_133-1575043694:159809..162394TCONS_00047625-exon-scaffold_133-1575043694:159809..162394Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_133supercontigscaffold_133:150031..162394 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.54845e-09	1.24961e-07	0.17457	0.469415	2.45782e-09	0.888211	0.487523	3.01003e-09	1.13222	1.29214	1.70332	1.74778	3.56311	5.64203	5.13395	8.14428	3.00178	5.81109	5.5726	2.01693	0.699803	1.34027	1.48126	3.45349	4.62844	2.61659	9.90454e-07	0.00216026	3.94927	2.6563
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047625 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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