TCONS_00047588 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047588
Unique NameTCONS_00047588
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2021

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047588 ID=TCONS_00047588|Name=TCONS_00047588|organism=Clytia hemisphaerica|type=transcript|length=2021bp
TTTTATTCGATAGAGGATGGAAAACAACGGTACCGCAGAGACCTAGAGGA
AAATGAGGAAGAAGATATTTggcgtttcattttcaatagaGAGAAGTTTA
CGAAATTAATTCGGAGGATATCGAACGAAACATACCAAGACGAGATTATT
CGATCGTTGGCAAAATTTGTTCCGACTGAACGACTTTGTAAAGATTTTGT
GGAGAATTGTCGATCGAAGGAATTCCAggaaaaagattacatcatcaAAA
CAGAACACAGTAAATCTGGCCTGGAATCTGAGAAAAATAGGAAATTTCTT
CGAGGCCCTCCAGGACCACCAGGACCTCCGGGACCTCAGGGACCTCGAGG
ACCAGGTCTAGAGTCACCAAAACTTGTTTCAAATTCCTTGAATCATGGAT
TAGTTAATATCACTAAATCAAAGACTTTCGAGTGTGTTTTTTACGGAAAC
CCAATACCAGAAGTCTCTTGGGAGAGTTCtgcaaaagattttgaaatatc
ttCTGTTCTCAACAAGGAAAAATCCGAAATCAAGACTCAGTTGGTCGTCT
ACAATACAAGTTGGTCTGACCAAGGTCCTGTCAAATGTTCAGCTAGAAGT
ATCCTTGGTGAAGCTTCACATTCTGGGAACCTTACCGTGTTGTCTAAACC
AGTTATTCAAAACCAAAAGACTTTGGTCTTTGCACCGCAGGGGATCAACT
TTAGATTCCCTCCTTGTGAAGTTCGTTCAAATCCACCAGCCAAAATCACA
TGGAAACGTATATTTTGGTCGATGCCTGCAGGACGTTTTGAAGTTCAAGC
GAACACTTTGACGATTggaaatcttcaattttctgatGAAGGGTTTTATG
TTTGTGAGGCTGAGAATTTCTTAGGCAAAGATAAAAGCACGTTACAACTC
aaagtaaaagcttttgaaatgcaaaaaacaTCTGTCTCAAGCATCAACAT
ATATCCTAGTGAGATTGCCAACATCAGTTGTTCTGCTCTTGGAAATGCTG
TCAAAATGGACGGGAAAATCACAAAGGCAGGAGCTGCAGTGGACTATAAG
GTAGATCGTTCGGCAGACAATAACACGATTACTGTGATTGCAAGTGTCAA
AGAGAAGGGGGCCTACGTATGCTCGATTTCCAATGCAGAAGAAACACTTG
AAGTCGCTGTCTTAGTTCACTATGTCGAGTTGGGTGCATGGAGCAGCTGG
TCATGTAATTGTGAAAgtcgaaaaaaaacaagaaatagAATCTGCAAGAA
TGAATCTCCAATGAAAAAATGTCGTGCTCAGAAAAAGGAAACAACCAGTT
GCATTTGCANCAAAATGAATCTCCAATGAAAAAGTGTCGTGCTCGGAAAA
AGGAAACAACCAGTTGCATTTGCACATGCAAAAATGGttggaaaaagaaa
tcaaacCCGTTGTTATGCTGACATCACTGTTAGAAATACATGGAACAACG
CAGAGCTATTTTGCCAAAGCAGAGGTGGACATCTTGCAAGCATATCAAAT
AGTGCAGAGAAGGATAACGTCTACAATACTTATGGTGGTAAGCCAAATGT
CTGGATAGGTTTATCTTTTGAAACCGAATGGCAATGGAGTGATGGAAGCC
CTGTTGTTTATTATAAtaatcttcaaaagtcgagatcTGGTAATGGTAGA
AAGGAATGTGTTTCATTCGATGCTGGTGGAAGCTTGTGGGCTCTCCAAAA
TTGTGATCAAAGATTTATCTTTGTTTGTGAAGCATCAATGCAAGACAATC
TTCCTATATAGCGCTTATTCAACTGTGGAAGAAAATGTATAAGTGGGCCA
GCTTACTAACCGTTCTATTGGATCTTCAATCGTTGGCTTTTGCTGCTCAC
TACCTGAGCATCCTCGAACAAAATGGCGTCGTCCTTCCCTCAGAAGACTC
GCAAAGCATTGACGCTAGATCACAAATCGaatgcattttgaaatgtcGCA
CAAAATTCAATAAGAAGAATGGGTTCTACACTGAGGATAATTTATGCTTT
TGTTCAAATGGGAATTTTGAG
Run BLAST on NCBI

transcript from alignment at scaffold_132:139807..151954-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047588 ID=TCONS_00047588|Name=TCONS_00047588|organism=Clytia hemisphaerica|type=transcript|length=12148bp|location=Sequence derived from alignment at scaffold_132:139807..151954- (Clytia hemisphaerica)
TTTTATTCGATAGAGGATGGAAAACAACGGTACCGCAGAGACCTAGAGGA
AAATGAGGAAGAAGATATTTGGCGTTTCATTTTCAATAGAGAGAAGTTTA
CGAAATTAATTCGGAGGATATCGAACGAAACATACCAAGACGAGATTATT
CGATCGTTGGCAAAATTTGTTCCGACTGAACGACTTTGTAAAGATTTTGT
GGAGAATTGTCGATCGAAGGGTAAGCAATTATTATTATCCACGGTTGATT
CTTTCTTCGTCAACCTTTTTTGAGGAAGCCACTGTTTTCGAAAGTCCGTT
TTTAAAAAGTACTCGAGTCTCGAATAAATTGTTTGCTTTATTTAGTGTAA
TTAGTATTCACGAAATATACCATGAAAACAGGATCTGATTGGCTGAAAAC
TGTTCGTTTAAGAACACATACCCAATCAGTGAGCTTGTTTACGTGATATA
TTTTTAGTTCACATTTCACTGAATCAAAACAGACAGCCAATTCGTAACCC
GTGAAAAATCTCTGAGCATATTGAATTTTTCATATTTGGCACGTGTGAAA
CGCGAAGTTCTGCCTGATGAAGCCAACAAAACTTTGGCGTGGTATACTTT
TTCTGTTAGGCCAACTATCCTCAAGTCTGAAAATTAAAAATTGCAATGAA
AAGATTTGATGTTAAGAAGAAAATGAAGACTTATACGAAGAGTATTTCAA
CTTTGAAAACCTTATTTCAGCAATGAAAAAACATTTGGTTAGCTTGATAT
AACCACGATTTAAATGATTTTAAATGATCTTTTCCTCTCTCGGAGATGAA
AAGGCGCTTGCTATGTCAACTGTTGAATAAATTTTCAAGCAGGGATCAAA
ATCGACTCGTTTTTTATAAGAGCCTCCAAAATTTTTGAAGCCTTGGGATG
TTCTTAATATGTTCTTATTTTCGCCATTTTTTGAGTATTTTTGCCCCTTC
TCCTAAAAAATTCAGTGTTCTAGAGTCCGCGAAGCCTTATAATGTTCTTA
ACATTTTAGCCATCAAAGCCTTATGTTCTTATATAGTTCTTGTATAAAAA
AACGAGTATTTTTCTTTCAGCAGAATTCCAGGAAAAAGATTACATCATCA
AAACAGAACACAGTAAATCTGGCCTGGAATCTGAGAAAAATAGGAAATTT
CTTCGAGGCCCTCCAGTAAGTTCCATTTTAATAAATTGATTCTCATCTCC
TCAGTCAGTGTGTGTATGGAACTTAAAATCTAATCTACAATCATGGATAA
AAAATATTTGAGACAAAGGGGTTATCCTGGCGAAATTTTAAAAACCACAA
ATGATTTTTAAGTGCAGCTGGAAAGTAGAGTATTAACTATGAGTTTTAAC
ACGAGACTTAAGACTTAGGAGGACCTTAGGATCAAGAGGACCTTAGGATC
TCAGGATTTAAAAGCTCAAATTTGCTCGAATAAGGCTTGAAATATAGCCT
AGAAGCCACCGATTCCCTCTTAACTCGAAATATTCAATAAAAGAAAGTGG
AAGTGCTAAAATAGCAGTTCTCGCCCAAACTTTAAATTCTGAAAAACGTT
AGAATACACTAAAATGTCTCGGCCATAATTGAAGAAAATCAGTCTTTTGG
GGGTAGGTAAGTGTGCTGCGTAGTGGGACGGGTAAAAGATAGTTGTGAGT
GGGTGCTGATTAAATCTTTCAGCCCGATCCATTTACAAGTTTTCTCTCTA
CGCTTACCTAACCCCGACGCTCACTTACCTCCCGTGAGACATCGTTTCAG
CCCGAATGCGTGCCAGTCTATTTATATAATCGAGAAATTTCATTTCGGGT
CATAGCAGAAAGATGTACTGGACATTTATTTAATAGGAAACAAATCTGTT
CATTATTATCTCCCAAGAATTTTGATTTTGATTATGAAAACATTACCATT
CATTTTTAGGGACCACCAGGACCTCCGGGACCTCAGGGACCTCGAGGACC
AGGTCTAGAGTCACCAAAACTTGTTTCAAATTCCTTGAATCATGGATTAG
TTAATATCACTAAATCAAAGACTTTCGAGTGTGTTTTTTACGGAAACCCA
ATACCAGAAGTCTCTTGGGAGAGTTCTGCAAAAGATTTTGAAATATCTTC
TGTTCTCAACAAGGAAAAATCCGAAATCAAGACTCAGTTGGTCGTCTACA
ATACAAGTTGGTCTGACCAAGGTCCTGTCAAATGTTCAGCTAGAAGTATC
CTTGGTGAAGCTTCACATTCTGGGAACCTTACCGTGTTGTGTAAGTCTCT
TGTATTATTTTACTTCCTATTCTCTCTTCCTGCGCGAATGCCATGCTAAA
GCTGAGCTACAGTCCAACCTCTAATTTGCAGACACTATTAAAGAGGTAAA
GTAGTGTCCACTTTTTACATACTGGGCCGTCTTTTAGTGTTTTTTTAGTG
GTTAATTTGAAGTTTTACTGTAATGGAACTATCACATAAGAGAGATTTTG
GATGCCTTAAAACTTAGTTAGGATAGTCAAGAAAATATCTATTCTATTTG
GTCGAGTTGTAGCAAGTTCTGAGGCTCATTTTCGTAACTATAGATTCATT
CACGGAGCGCCCTATCAGTACTTTGAACTAACTTCCCAATTCTCCTCAAA
TGACATAGGTTGACCAGCGTGAAGATTTGTTTACTTGCCAAGTGAACCAC
TACATTTGCCTATGTGGTTAATGACCAATATACTGAGGGGGGGGGGGTTT
CAAGGGGTACCCGATTCCGCAATTCCGCCAATTTTTTCCCCAATTTCCGA
CAAACTGTCTAAAAATGAACCGAAATTCCGCCACCGAAAATTCCTTTGAA
ATTCAAGATTTTTGTCAAAAATTCCGCGAATTTTAAATATTCTTTGCCAA
TTCCAAAATTCCGCAAAACTTTTTGCAAAATTCCATTTTTCCGCACTAAA
CTTGTCTAATTTTCCGTCTCCGGAGAACCCAATTTCCGTAATTCCGTCTA
AATTTTCGCCAAATTCCGCCACTCCCTCCGAAAGAAAGGGTCGATTCTGC
TCCTCCGCCAACCATAAACCCCGTCCCTATACTATAGAGCCATTTTCATT
TACATTTATCTTTCTCTTACCAGCTAAACCAGTTATTCAAAACCAAAAGA
CTTTGGTCTTTGCACCGCAGGGGATCAACTTTAGATTCCCTCCTTGTGAA
GTTCGTTCAAATCCACCAGCCAAAATCACATGGAAACGTATATTTTGGTC
GATGCCTGCAGGACGTTTTGAAGTTCAAGCGAACACTTTGACGATTGGAA
ATCTTCAATTTTCTGATGAAGGGTTTTATGTTTGTGAGGCTGAGAATTTC
TTAGGTAGGTCAATTATCCCAGCTGGCACACAACGTTGTTTCAACGTTTA
TCTAACGTTCAATGTTGTGTGCCAGCTGGGATGGTATAATTTCTCTTAAT
CTTCCAAACCCGAGTGTCGTTTATTTAAGTTCAAAATGAGTCCCCATACT
TAAGGCTATAGCTCTTGACCACTTGATTTTAAAGGGCATAGGCTATTCTG
AAAGAATATGAAAATATCTTTCTAATGGTATTAAAACCAATGTCTAATTC
TCAAGCTACAAGCTTTTATGCTAATTATAATTTCTTGAATTAAAAAAAAA
GCTAAAGTTTTCAAATTATTTCGCACTGGAAAGATTAAGATGGTTTGCCA
ATTACATAACACTAAATCGAGCAAGATTCTCAACATAATAGTATAACTGG
ACTCTGTACAAGGCTGTAAAGATCTTCTTGAAAAAGAAGTTGGTGTCTAT
ATCGAATTAAAACATTATAAGGCCGTTTGGGTGTATTCTGTTTTCTGTTA
AAGAGACCACACTATATTTTATCATGTTGAATCAAGACACACATTCAGGG
TCGTTATAAGGGACGTCATCATGGCGTTCTAAATTCGCCTTTGGCGTCAT
CTATTTTCTTCTAGGCAAAGATAAAAGCACGTTACAACTCAAAGTAAAAG
CTTTTGAAATGCAAAAAACATCTGTCTCAAGCATCAACATATATCCTAGT
GAGATTGCCAACATCAGTTGTTCTGCTCTTGGAAATGCTGTCAAAATGGA
CGGGAAAATCACAAAGGCAGGAGCTGCAGTGGACTATAAGGTAGATCGTT
CGGCAGACAATAACACGATTACTGTGATTGCAAGTGTCAAAGAGAAGGGG
GCCTACGTATGCTCGATTTCCAATGCAGAAGAAACACTTGAAGTCGCTGT
CTTAGTTCACTATGTCGGTAAGTTTGATTGATATCTAAAATATTGTAAGA
CTCAAAGTTCTTGAATATTGTGATTGAGTTTCTATAAAATTCTCACAAAT
CAGACTGCGAAAAGAAATTGAATATTAGTGAATCTAGGAAAACCAGACAT
ACCAATGCTTAAAATGATGTCCAACGCCAGAAGTTTTTGAGATCTCAAAA
ATAGTCTGTACCTCTGGAAAATAAAAAATCCAGGGTGGTCCGGTTTTTTG
AGTGTAAAAATCCAGGGTGGTCCAGTTTTTCAGAGGGAAACAATCCATAG
GGTGGTTATCCTGTGTTGAGGAGGTAAAACCCAGGGTAGTTCAAAAAATT
AGAAAAAAATCCAGGAAACTGTGTTAATTGATATAAAAATTATCTGTTAT
AGAGTTGGGTGCATGGAGCAGCTGGTCATGTAATTGTGAAAGTCGAAAAA
AAACAAGAAATAGAATCTGCAAGAATGAATCTCCAATGAAAAAATGTCGT
GCTCAGAAAAAGGAAACAACCAGTTGCATTTGCANCAAAATGAATCTCCA
ATGAAAAAGTGTCGTGCTCGGAAAAAGGAAACAACCAGTTGCATTTGCAG
TAAGCGAGCTGTAGTAGTTGACACTCAACCTGAGACGACTTAGAATTTTT
TTAAATATAGGATACATAGACCCAGTATCTACGGCTAATTTCAAAATTCA
TTGCCGTACTACGAAGCGATAAACGTGAGAGAGTATATAGCCTTAGGTTG
AAACACATTTTTTTATAAGCAACTCTAATTTTCGGCTGATGGCTGGGGTT
GCTTAGCATTCTAGCTTATTTTCTGGGCTTAGATCATCCTAAAAGCTTTT
ACTTTATGAGATAGTGAAATAAGTTTGGCTAAATTCAGTATCGAGCCTTA
GCAATCTGGTTGCTTATAAACGATATGTACACTGGCATCAACGAGATAAA
AATTGAAATGACGTGGTGTGACAGCTCAAACTGCTCTTTCAGAAGACGCA
TACAGGAGGGCACTTATTTATAGGTTGACTAACCCTCTCCTCTTCTGAAT
TCGATACATTTGATGTCTTTGATTTATTTCGATATTATATCTATACTTCA
AATTTAACTAGTAAGTGCTTCACAGTAGCGTAGACAGGATAACCCTGAAA
TTTCCGATTCCGGGGATAAATTTGCTTTGTGCTTATCTACACTACTGCAT
GAGTATATTAGGTTACTACTGTGTCGAAAATGATTTACGATTTCATTTCA
TGCTTTCTTTTTCGTTAAAACAGCATGCAAAAATGGTTGGAAAAAGAAAT
CAAACCCGTTGTTATGCTGACATCACTGTTAGAAATACATGGAACAACGC
AGAGCTATTTTGCCAAAGCAGAGGTGGACATCTTGCAAGCATATCAAATA
GTGCAGAGAAGGATAACGTCTACAATACTTATGGTGGTAAGCCAAATGTC
TGGATAGGTATGTATTTCATCAACCATATTGTAATCAGAGGGTAGGACTA
TTGTAGAAACCGCCCTAGAGGCGTGTCCATGTACCGTGGGTTCCATACGT
TGGAAATAGAATTTACGCAGCAATTCGCTCAGATATTTTCTTATAGCATA
GCAGATATGTTCCATCTGTAAGGAACCATAACTTCTACAAATTAGATAAA
ATTACGGAAAGTGTTTTATACCACACTGGTCAGCTTAAGGGCTCTGACCA
TAGCCAAAAAATTTGCTGAGGGATTTGAAATAAAACATTTGTTTTGGATT
CCTTGACACTTATAGCAAAAAATTGTCTTTACAAGTTGTTTGGAAATTTA
TTCTATCAAGAGTTATTAAGAATTTAATTACAAAAATGATGTTATGAACT
TTAAAAAGATGTTAATAGAATGTTATATTACCCTCTTTTGCAAAAATTGC
TAAGTTTTAATGGGTAATTAACGTTTTTCTTTTAAATTGTCTGCAAAGAA
TTGAACTATTTGAATTTTTTCGGAAATACTTTCTAAATTGATGTATCAAA
AATTATAACACTGTTTTTCTACAAAAGATTGGGATGAAAAATTGGTCAAA
AACCGGTATTTTCAAGAATTTGAGATAAAGAAGCTTTTGCAAAAATTTTC
CAAAAAAAAATTAAAATGTTTTTTCTTCGCCGAAAATAAGGTCTTCAAAG
TTGAAATACGCTCTATTGCAAAAATCTTCATTTTCTTCTTTATCGAATTT
TTTCATTGGGATTTTTAAATTTAAATAAATTTAATTTAGATTCAGGAATA
GTTAGCCTAACAGAAAATGTATAACATGCCATAGTTTTCTTGTCTACATC
AGGCAGAAATTTATACTTTGTACATGGCAAATATGAGAAATTAACTATGG
TCAGAGCCCTTAAAGGGCCAATTTTTAGTTCGAATTACAGAAAAATTCGT
GGTTCGAATTACAGAGGGTAGACTTAATCATCGACTTGATTATTTTTCAA
AATTTTACATTTAAGGTTTATCTTTTGAAACCGAATGGCAATGGAGTGAT
GGAAGCCCTGTTGTTTATTATAATAATCTTCAAAAGTCGAGATCTGGTAA
TGGTAGAAAGGAATGTGTTTCATTCGATGCTGGTGGAAGCTTGTGGGCTC
TCCAAAATTGTGATCAAAGATTTATCTTTGTTTGTGAAGCATCAATGCAA
GACAATCTTCCTATATAGCGCTTGTATGTCATTTTCATTTGACCTTCTTT
GTGTTTTCTACAGTATTAAGCTATAATGTTTTTGTTTTCGCAAGATGATT
TTTAATTACACAGTTTTTTGTTATTAAAATGTCTTAATTTTAGCTGAACC
TGGATGTGCTTATCTTTTGACAACTTTTGAGCCTAAAAATCTTTTATTGA
CGTACTTGAAAAAATTTATTTACTATACATTTTTACCTTGGGTTGTAAGA
TTTGACCCTCAAGTCAAACAAATCTGCTGCTCAAATTTATAGTTTGAGAG
TAAGCTTGACGCAACGTTTAGAATACAATACGAAATAGACCTTATCGAAG
TTTTCGATTTTTCTAAAAAAGTGATGCATTGTGGGATTGTTTCGAGTGTA
TTACAATAGAATTCCCTTGAGGAATTCCTAAGAGATTTCTATTGTAATAC
ACTCGAAACAATCCCACAATGCATCGTTTTTTTAGAAAAATCAAAAACTC
CGATAAGGTCTATTGAGTCCACTTGAATTACAAAATAAATATTTCAATAA
CTCTAAAGGCCTCCTACTCCTACTTGGTAACAACGTAAGGAGCTAGAATT
CTAATACACGTTTTTTTATAAGAACAAACTATATAAGAACATAAGGGGGG
TTTTCAGGGGTCTTAAATACTGTCATACCGACAAAAATTTGGGTCAAATA
CCGTAATACCGTCGATAAAAGAAGTCTAATTACCTAAATACCGATACCGG
TAGAAAATGAAATACCGTAATCCCGTCGTTTTTTTGGTAATACCGATTAC
AGTGGGGAAAAAAGGCCCAATACCGTCGTACCGTAAAAGTGAAAAGCCCC
CCATAAGGCTTCGATGGTCAAAATGTTAAGAACAAGTTAAGAACATTTTA
AGACTTTGTCGGCTCTAAAATACCTGTTTTCTTAGAAAAATGCACAAAAA
TACCCACAGAATGGTGAAAATAAGAACATGTTAGGAATATTTATAGGTTT
AAAACTTAAAAAGTTGAGAACATCCGAAGGCTTCAAAAATTTTGGATGTT
CTTATGAAAAGAAACGTGTACCTTACTCTTAGGTGCCAAATAAACGCCCC
CCCCCCCCCCCCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCCCCCCCCCCCGTTTATTTGGCACCTAAGAATAAGTATATTGATTTTGT
CGTGTAGTTAATTTGGTGGTTTGCAGAATTTATATTATTTTGTAGGGATT
CAAATTGATAGATGGGGAAATTCCAGGCACTTAGGAATAAAAAATAATGT
TTTAACTTAAAAAATGCTGATTCCACCATATAGAATTTATATCCTAAAAA
GATTTTTTAAATTTCTTCAATCAAAGTTCCCCTAAAAATAGTCCAAATTC
ATTACTAAGTTACAACAAAACTTTATGGTTTTTGAACTGAAGTTCATTTA
ATTTTGAATCAATTATTAACGAAACATACAATGCATCATTGAGAACTTGA
TTCGTTTGATATGTTTTTTTTTCGTTCTTTACTTAGATAAGAAAAAGAGT
ATATGACAGAGTAAGTCTGTCAAAAAGGAAAATCAGATGTTTTAAATCAG
TATTTTGACAACAGACCAATACTTTATGAGTATATTGTTTGCATGTTTGA
AAACTATGTTATTGTATTCTGAATTTTCGCTTGAAAAAAAAAACTCTGTA
TGTTTTAGGGGAAGAATTTTCGCATTTGACGAGGATAAAGCTTTTTAAAA
TATTTCACGGCTTTTCAAATTATTTCGAGAGAAAAAATTTTGCGGTTTTT
TCTTAAATTTTTATTCAAGAATTTCACAATCTTTTGCAAAACAGGCGAGA
ACTTGACTTATCTCACACCGTAAAGATAAAGTCAAACGAAAGAATAAAGT
CGCCCAGTTTTTTTTAATTGGTCTCGGTATATTAGCTTTCGCAAATTAGC
CAAGTTTCTAACCTGATGTGTAACCTAATTGTTTTTTCACTGATTTTCGC
GAAAAACTGTAAAAACTGGTTATTACGTCATAATCGATGACGTCATAAAA
ACTAAACATTGAATTTCTCAAGAATGGTTTATCCGATTGTCTTCAAACTT
TCACCAAAGAAAAGTCGATCGTTTAAAAAAAGAATTTTTTCAAAATTTTC
ATGACGTCAGCAGAAATTAGGAAAAAAAGAAAAATCCTATTTTTTACTGA
CGTACACGTTTTTTTTTTATAAGAACGTCAAAAATTTTCGAAGCCTTCGG
ATGTTCTTAGTTTTTTGGATTTGAAGCCTAAAAATGTTCTTAAAATGTTC
TTATTTTCAGCATTTTTTGAGCATTTTGTTGTAATTTCTTAAGAAAATGC
ATGTTTTTAAGTCCCCAAAGCCTTCGAATGTTCTTAGAATGTTCTTAATT
TTTTGGGCCTCGAAGCCTTATGTTCTTATATAGTTTGTTCTTATAAAAAA
AAACGTGTAATCAGAATTTCGAGAAATAATTAGTGCCCACCACGGGATGA
AACCCTCCCATTTATCCTCATCCTTCATTGAGGGGTCCTTCATTATGCAA
GCATGATTATTTACAGCTATGAACCCTGACCACCATGCTGTTCTCACTTT
ATACTCATCCATCTGGAATAATTTATTAATAAAACTCCCAACAAAATTCA
ACTTCCAGGTAATAAGTATCGTTTGTGGCTGCGTTTAGACCAGCCTGGCA
TTTGTAATTGCTTGCAGTATTCTTTTGAATTCTATTGTTCCGCGCAATTG
TTCGGTTTGTCAAATGCCTAATGATGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCTAATGATGC
CAGCGTGTTGGCATTTCGTTGGCATTTGAAATGCCATTTTGAGCAAAGGA
ATCCCCTTTTCTGGCATTTCAAATCAAACAAAGGAACCAAAAGAAAGAGA
AAAAATGACATTTTTGATTATTTAAAGTATTTGCACGTTTTTTATTCAGT
TCTTTCTATAGATTGTAAAATTTGCAAGATTTGCCATAGCCTAGCCCTAC
GGCAAAAAGTTTNTTTCATTGTTTGATCTGTCAAAGTTGAACTTGAGGGA
ATCACCTTTTCAGTAATGACTCTAAAAAGACGATTCCTTAAATGCCATGA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGACGATTCCTTAAATGCCATGACAGAAA
ATACAATGGAAAAGCTATTAAAATCGAATCCCTCATGAGCAAATGCCAAA
TTACAAATGCCAGTTGGTCTAAACTGTTTTGGGATAAATAACGTTATCAA
AAACTTGAGCAAATCGATTTTTTATCTTTTGAAAAAAAAAAGTTAAAACA
ATAAGCTTTCAGACCAGAGTTTTTTATAAGGACTATGATGATAAGTGATC
ATTTTACTATAAATTTACTTGTTAGATTGTTTCACTCTTGATTGTTTTAT
GTTTTGTCTGTTGGTTTCTGGCTAAAAAATCAGCACACGCGCGCGAGTTA
AGGCGATTTTTGGTTTAAAATTAAATAATTGAGAAGTACAATACGATTTA
TATGCCGTTTATAAGTATCACATTGTGTGAACACCACAATGTAATAGCAA
ATCTTGCGGTTGAATTTGAGTTAAGGGCTCTGACCTTATAAAAAAAAACG
TGTAGGTTCTTTAACACTTTTAACAAAGAATTGCCTTTATAAATTTCTTT
TTAATCAAATCCCTTAAGAGTAATTAAGAATTTAATTGCAAAAATGACGT
TACGAACTTTAAAAAGACGTTAATAATATGTTGCTAATATGTTGTTCTTT
TATAAAAAGTGCTAAGTTTTAATGGGTAATTAACCTTTTTGTTTCGAAGT
TTTTTTAAACTGTCCCCAAAGAATTGAGCTGTTTTAGATTTTTCGGAAAT
TTTTTTTTCTTCTTCATCAAAATTTTTTATTGTGATTCTTAAATTTTCAG
AATCACGGATAATTGGCCTAACAGAATATGTATAACATGCCACAGTTTGT
GGGCTACATCAAGTAGAAATTTATATTTTGTACATGGCAAATATTAAAAA
TTCACTTTGGTCAGAGCCCTTAAAATTACATCTCCTTAAAAATATGAATT
TTTGAGGGAAAACATCCTGAATTATTAATCCATATTTTCCATGTGACCAC
TAAAATGTCACAAAGATATGACATGAAAATCAATGAGCTCCCAAAAGTGT
CGTGAAGAGTTGTTTATCATTCCATGTTTCAAAAATTTCATGACATTTCA
AAATTATTTTTTACTACGCGATAGTGACTCTTGAAAGTGTTTTTGGTTGG
CAAGATTTTCTTATTCAAAAATAAAATACAGTAGTGTTTCGCTTATTCGA
AGTTCCATCATTCGAATCTTTCTATAATTCGAACTCATTCCCTGTCCTAG
TCAAGGAGAAACCCTCTTGATATACTTTCTATAATTCAAATCTCTCTGTA
ATTCGAAGAAATCAGATTTCCCGTTTGATTTCGAATTATCGAGATTCAAC
TGTGGAAGAAAATGTATAAGTGGGCCAGCTTACTAACCGTTCTATTGGAT
CTTCAATCGTTGGCTTTTGCTGCTCACTACCTGAGCATCCTCGAACAAAA
TGGCGTCGTCCTTCCCTCAGAAGACTCGCAAAGCATTGACGCTAGATCAC
AAATCGAATGCATTTTGAAATGTCGCACAAAATTCAATAAGAAGAATGGG
TTCTACACTGAGGATAATTTATGCTTTTGTTCAAATGGGAATTTTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030309XLOC_030309Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047588-exon-scaffold_132-1575043694:151735..151954TCONS_00047588-exon-scaffold_132-1575043694:151735..151954Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1575043694:150790..150881TCONS_00047588-exon-scaffold_132-1575043694:150790..150881Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1575043694:149715..150045TCONS_00047588-exon-scaffold_132-1575043694:149715..150045Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1575043694:148651..148881TCONS_00047588-exon-scaffold_132-1575043694:148651..148881Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1575043694:147738..148040TCONS_00047588-exon-scaffold_132-1575043694:147738..148040Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1575043694:147156..147352TCONS_00047588-exon-scaffold_132-1575043694:147156..147352Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1575043694:146298..146481TCONS_00047588-exon-scaffold_132-1575043694:146298..146481Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1575043694:145082..145289TCONS_00047588-exon-scaffold_132-1575043694:145082..145289Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1575043694:139807..140061TCONS_00047588-exon-scaffold_132-1575043694:139807..140061Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1510915933:151735..151954TCONS_00047588-exon-scaffold_132-1510915933:151735..151954Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1510915933:150790..150881TCONS_00047588-exon-scaffold_132-1510915933:150790..150881Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1510915933:149715..150045TCONS_00047588-exon-scaffold_132-1510915933:149715..150045Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1510915933:148651..148881TCONS_00047588-exon-scaffold_132-1510915933:148651..148881Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1510915933:147738..148040TCONS_00047588-exon-scaffold_132-1510915933:147738..148040Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1510915933:147156..147352TCONS_00047588-exon-scaffold_132-1510915933:147156..147352Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1510915933:146298..146481TCONS_00047588-exon-scaffold_132-1510915933:146298..146481Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1510915933:145082..145289TCONS_00047588-exon-scaffold_132-1510915933:145082..145289Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1510915933:139807..140061TCONS_00047588-exon-scaffold_132-1510915933:139807..140061Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1491911889:151735..151954TCONS_00047588-exon-scaffold_132-1491911889:151735..151954Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1491911889:150790..150881TCONS_00047588-exon-scaffold_132-1491911889:150790..150881Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1491911889:149715..150045TCONS_00047588-exon-scaffold_132-1491911889:149715..150045Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1491911889:148651..148881TCONS_00047588-exon-scaffold_132-1491911889:148651..148881Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1491911889:147738..148040TCONS_00047588-exon-scaffold_132-1491911889:147738..148040Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1491911889:147156..147352TCONS_00047588-exon-scaffold_132-1491911889:147156..147352Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1491911889:146298..146481TCONS_00047588-exon-scaffold_132-1491911889:146298..146481Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1491911889:145082..145289TCONS_00047588-exon-scaffold_132-1491911889:145082..145289Clytia hemisphaericaexon
TCONS_00047588-exon-scaffold_132-1491911889:139807..140061TCONS_00047588-exon-scaffold_132-1491911889:139807..140061Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_132supercontigscaffold_132:139807..151954 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	2.05473e-09	0	0	0	0	9.13417e-06	8.80864e-10	0	0	0	0	0	0	0	1.00128e-09	0.000126305	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047588 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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