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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047532 ID=TCONS_00047532|Name=TCONS_00047532|organism=Clytia hemisphaerica|type=transcript|length=787bp
GCGCtaataaaatatcgaaaaatggAGATTCCCAAGATTGGCGAAGGTAT
CTTAAATCTTAgttaaaaaaaatctctctgatctttcttttttttctttt
gttaattgctTACGTCATTGATGACTTGCGAGATATTTCTCATGATGAAA
ACACACGGGTTTTACCAAGCTGGGTATACAAGCCTGGTACGATTGAATAT
TTGTATCTGCtttctcaaagttgaaatgACAAAGTGGTGTTGTTACTTGT
GACTTGAAGAATAAGGGTAGTGATCCAGTTTTTGCTTTTTGTCTTTATAG
CCTTTTCGTCTTTTGCTTTAATAAGATCAAATTAAATGCTTGTTATAGTG
GATTTTTGACTGGATTGATGTGTCATTTTGcatgtgttttgatttttgag
atgtTATGTCATAAACTTCTTGCAGTTCCAAAATCACCCAAACATTTTCT
GCAACTCTCCTTGTTTTATTATTGATTTAAACGACAGCAAGTCAAAAAGG
AGGCTGTTCTCTAACTATCATTTCTTCCATTGTTCTGGGGACTGGTcggt
ttttatttaaaaaattttcaatggcCTGAATTTATTATTCTTAATGCTTA
ACTAATATCCTACATTTGAGGAGTTGACGTAGAAAAGGGCTTCACAAAAT
GACTTAGTCATCCAGTATCTTAAATGGAATCACAACCTAACTGTAATGGT
ATGGAgtactttgaaattttagtgCTGTCCTTTCGAGACAAATACTTGCA
GAATTTGTATTAAATGCTTGTGGCTCCTGAGTAGCTC Run BLAST on NCBI transcript from alignment at scaffold_131:69019..70119- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047532 ID=TCONS_00047532|Name=TCONS_00047532|organism=Clytia hemisphaerica|type=transcript|length=1101bp|location=Sequence derived from alignment at scaffold_131:69019..70119- (Clytia hemisphaerica)
GCGCTAATAAAATATCGAAAAATGGAGATTCCCAAGATTGGCGAAGGTAT
CTTAAATCTTAGTTAAAAAAAATCTCTCTGATCTTTCTTTTTTTTCTTTT
GTTAATTGCTTACGTCATTGATGACTTGCGAGATATTTCTCATGATGAAA
ACACACGGGTTTTACCAAGCTGGGTATACAAGCCTGGTACGATTGAATAT
TTGTATCTGCTTTCTCAAAGTTGAAATGACAAAGTGGTGTTGTTACTTGT
GACTTGAAGAATAAGGGTAGTGATCCAGTTTTTGCTTTTTGTCTTTATAG
CCTTTTCGTCTTTTGCTTTAATAAGATCAAATTAAATGCTTGTTATAGTG
GATTTTTGACTGGATTGATGTGTCATTTTGCATGTGTTTTGATTTTTGAG
ATGTTATGTCATAAACTTCTTGCAGTTCCAAAATCACCCAAACATTTTCT
GCAACTCTCCTTGTTTTATTATTGATTTAAACGACAGCAAGTCAAAAAGG
AGGCTGTTCTCTAACTATCATTTCTTCCATTGTTCTGGGGACTGGTCGGT
TTTTATTTAAAAAATTTTCAATGGCCTGAATTTATTATTCTTAATGCTTA
ACTAATATCCTACATTTGAGGTAACAACATTTGACCTTTTTAAGCAAGGG
TAGTACCATGCCAGACATTCAGGATAAATTTATCAATTCTTTGCTAATGT
TTTGAAATTAATCATTTTATAGTGTTGTGTCAATTTGATTGATCGATATT
CGTTGACTACTATCGGAAGTGTCTATCCTTTTGGGACAATAGGTTGAAAC
TTTATAATAAGGGATAAGAAGACAAGTTTGACTGGCAGGTTCACTGCTCC
AATTTGCAGCCAAATGTTTTGTGACTAAATGCTAAACAGGTTTTTTGGAA
ATACTTGATAAGTCAAATTATTTTCGCCATATAGGAGTTGACGTAGAAAA
GGGCTTCACAAAATGACTTAGTCATCCAGTATCTTAAATGGAATCACAAC
CTAACTGTAATGGTATGGAGTACTTTGAAATTTTAGTGCTGTCCTTTCGA
GACAAATACTTGCAGAATTTGTATTAAATGCTTGTGGCTCCTGAGTAGCT
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047532-exon-scaffold_131-1575043694:69500..70119 | TCONS_00047532-exon-scaffold_131-1575043694:69500..70119 | Clytia hemisphaerica | exon |
| TCONS_00047532-exon-scaffold_131-1575043694:69019..69185 | TCONS_00047532-exon-scaffold_131-1575043694:69019..69185 | Clytia hemisphaerica | exon |
| TCONS_00047532-exon-scaffold_131-1510915933:69500..70119 | TCONS_00047532-exon-scaffold_131-1510915933:69500..70119 | Clytia hemisphaerica | exon |
| TCONS_00047532-exon-scaffold_131-1510915933:69019..69185 | TCONS_00047532-exon-scaffold_131-1510915933:69019..69185 | Clytia hemisphaerica | exon |
| TCONS_00047532-exon-scaffold_131-1491911889:69500..70119 | TCONS_00047532-exon-scaffold_131-1491911889:69500..70119 | Clytia hemisphaerica | exon |
| TCONS_00047532-exon-scaffold_131-1491911889:69019..69185 | TCONS_00047532-exon-scaffold_131-1491911889:69019..69185 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_131 | supercontig | scaffold_131:69019..70119 - |
Blast
The following BLAST results are available for this feature:
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