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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047527 ID=TCONS_00047527|Name=TCONS_00047527|organism=Clytia hemisphaerica|type=transcript|length=115bp
AACCGAAACAACACCACAAGAGGCACAACAAGTGAACGTTGAAGAAGTCG
AAGTAAAGGAAGAATCGTCAAAAAGCAAGACAAAAGATGAACCTGCTAAA
CGTGTCGAAACAAAN Run BLAST on NCBI transcript from alignment at scaffold_131:2314..3770- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047527 ID=TCONS_00047527|Name=TCONS_00047527|organism=Clytia hemisphaerica|type=transcript|length=1457bp|location=Sequence derived from alignment at scaffold_131:2314..3770- (Clytia hemisphaerica)
AACCGAAACAACACCACAAGAGGCACAACAAGTGAACGTTGAAGAAGTCG
TCGTTGTGAAGAAAGAATCATCAAAAAGTACGACAAAAGATGAACCAGCT
AAAGGAACCAAGAAAACTGATTCTACTGTTGGTGCAGAGAAAACTACTTC
GGAGGTAGGTGGACTTGTTTGTTCTTTTGTTTTTCTTTGTTGAATTTTAG
CTTCTGATTAATTTTTCGGATATTGCATGAAAGTTCTAAATTGGAGAGCA
CAACTATCACAAGTTCTTGTGAAAATTAAAAAATTTGACTATTCGCCAAA
ATGCTTGCCAAAATTAAGTTTTCGCCAGAAAAGGTTCCCTTAATCTAGGT
CATAATAAATGCAACTTCCTTTAAATAGGGGGATGCCAACTTTTTTTGTG
GGGCTTTTGTGGAAGGGGTACCAAGATTTACAAAAAAAACTGGGGGGCTG
GAAATGTTTGTTTCAGTCAGTCTGTTTCTCAGTCTCAAGTCCACTACTAT
CGTTTAACTTGATAGTAAACTAAATAAGCACTTTCAACATAGCAACATTT
AGATTTTAAAATGTGATAATGGATGGCAAAAAGGTATTATGTTAATAATA
ACGCTAGTGTGAAATTGTTGACTTGTGACTGTATAATATACACTGTACTC
TTTCTTTATCATTTTGGTAGGTGGTGCATAGAGCGAGTTTCCTTCGATCG
AAATGGACTTTCTGTAAAAAAAGGGGAGATGAAATTAGTTTTAATTACAG
AAGGGGGATGGGTACCAGGGGAGTTCATACCTCTCTGCAAACAATTCAGG
TTCCGAGTTCGAATAGTGTAGTTTTTAAGCCAAACAATCGAAACATTTTT
AGGGATAGCCTAAACTTTAAGCTGTCATACTGATGTTCCTAATATTTGAT
TTTACAGGCCTCTGGAATCGATTTCAATTTGGTATCAAGAAGTCATAATG
GTGTTATTGAAATCTTAGAGGTTTGTAAACTGATTAAAATGAAGCCATGC
GGTTTAAAAAATTTATGAGCACGAAAGTTGAGTTTAGCGAGATATCTTGA
AGCACTTGGCAAGTCGAAATATTATAAAAAGGTACCCCAGAAGCACAAAC
GTAAAAAAATCTTGACACTCTTAGACTTCCTTTGGTCTTTCGTTTTTCTT
TGTTGAATTTCAGCTCCTGATAAGTTTTCAAAACAGAATGGGAGGTTGGA
ATTTAGTCACTACAAGGCATGATCAGTAATAAGCCAAAATTAACTCCACA
TATCACAGACCGGACAGTTTCTGGTTATGAAAGTGATGATGAGAGTTACT
CCTTTTGACTGTATGAATTTTCTCCCAGGACTCACAGGATATAATCAAAA
CAACGCCACAAGAGGCACAACAAGTGAACGTTGAAGAAGTCGAAGTAAAG
GAAGAATCGTCAAAAAGCAAGACAAAAGATGAACCTGCTAAACGTGTCGA
AACAAAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047527-exon-scaffold_131-1575043694:3749..3770 | TCONS_00047527-exon-scaffold_131-1575043694:3749..3770 | Clytia hemisphaerica | exon |
| TCONS_00047527-exon-scaffold_131-1575043694:2314..2406 | TCONS_00047527-exon-scaffold_131-1575043694:2314..2406 | Clytia hemisphaerica | exon |
| TCONS_00047527-exon-scaffold_131-1510915933:3749..3770 | TCONS_00047527-exon-scaffold_131-1510915933:3749..3770 | Clytia hemisphaerica | exon |
| TCONS_00047527-exon-scaffold_131-1510915933:2314..2406 | TCONS_00047527-exon-scaffold_131-1510915933:2314..2406 | Clytia hemisphaerica | exon |
| TCONS_00047527-exon-scaffold_131-1491911889:3749..3770 | TCONS_00047527-exon-scaffold_131-1491911889:3749..3770 | Clytia hemisphaerica | exon |
| TCONS_00047527-exon-scaffold_131-1491911889:2314..2406 | TCONS_00047527-exon-scaffold_131-1491911889:2314..2406 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_131 | supercontig | scaffold_131:2314..3770 - |
Blast
The following BLAST results are available for this feature:
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