TCONS_00047496 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047496
Unique NameTCONS_00047496
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1256

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047496 ID=TCONS_00047496|Name=TCONS_00047496|organism=Clytia hemisphaerica|type=transcript|length=1256bp
TCCCTAAATATAACAAGAAGAAACCTGAACAGAATCAATATAGTGTCCAT
TTCAAATATGAACTGTTACCACCTCATCCACCATTTCTGACCACTATatc
tttgaaaagaaagaatgTTATACTTTTAAATTCTGGAGATATGTTGTTTG
CCATTCTGATACCTGAACCTTCAAGTTTATTTTCTTGCGAATCAGGAAAG
GATATACAGACAAGATTGTGTTACTGCCAGCAACGCCAACAAGACGTGCT
TGCAAACCAAAGCAACATAGATGTCAATTATGACGACTCGACTGATTATA
TTTCATTCATAAATCAAGGATTTAATACAATAAATGATAACGATTCGCAA
ACATCCCTTCCTGACTCTCCTTTTGATTGTATGACAACTGTAATACCATG
TGCAATTACTACAGTTGATGGTTTGATACAGTTGAAGAATAGTTATGAAC
ACAGATGCTTTCGACATGCTGATAAAGGAGAAATGTCCAAATGTGACTTC
TTCGTGAATCAAGCTCAATTGGATGCAGAAAACTTTATGAACACAGAGCT
TCAAAAGAGAGAAGACATAAGCAAACGATTTGTTTCCCTCAAAGACTATG
ACATGCAATTTATTGagTTCTGCACTGAAGACGACTCTGCTATCATTTTG
ATCAATGCATTGGTCGTTTTAAGAAACACTTGCAAACCACAAAATGATAC
TGCAACTAACAACCCCGAACCATCCGCGACCAAATTCGATCTATTCGAAG
ATTCGAAATCAATGAAATTAGGGTTGTACACCGTTGGTTATATCTTGGCT
TGGAATATATTCACTGGAGAAGTCAAAGTTTTGAGAGAATTACCAATCAC
CGAAAGACCAAGCAATTACTGCAAACCAAGAAACTTCGCTCCAAGTTTCT
CTCAATCAACACAACTCCGTAAAAAGTGGTTTGTTCCTTCATCAAAGACT
TCTTCAATATCTGTGTTATCAAATCATACTGTATTGACTGGAAAATCAGT
TCAGTTTCTCTTCCATCCAGAGTTTCCCGTGGCTGTTGTTCTGTAAGATT
GTTGTTGTGGAGCTTGACGTTCGTAAGATATCTCTCAGTATTTTACTTTT
ATTCTAGTTAGTTTTATTATCATTTTGTTTGGTTTACGAGCAGCGTTTTC
TCCATGTGTTTTGTGCGATATAAATCATCTGTTTGATGATCTAACGAACT
TCATTAAGCGAACAATTAGAAAGAAACAAACGAACTACAAGTTGGATCTT
CAGAAA
Run BLAST on NCBI

protein sequence of TCONS_00047496-protein

>TCONS_00047496-protein ID=TCONS_00047496-protein|Name=TCONS_00047496-protein|organism=Clytia hemisphaerica|type=polypeptide|length=347bp
PKYNKKKPEQNQYSVHFKYELLPPHPPFLTTISLKRKNVILLNSGDMLFA
ILIPEPSSLFSCESGKDIQTRLCYCQQRQQDVLANQSNIDVNYDDSTDYI
SFINQGFNTINDNDSQTSLPDSPFDCMTTVIPCAITTVDGLIQLKNSYEH
RCFRHADKGEMSKCDFFVNQAQLDAENFMNTELQKREDISKRFVSLKDYD
MQFIEFCTEDDSAIILINALVVLRNTCKPQNDTATNNPEPSATKFDLFED
SKSMKLGLYTVGYILAWNIFTGEVKVLRELPITERPSNYCKPRNFAPSFS
QSTQLRKKWFVPSSKTSSISVLSNHTVLTGKSVQFLFHPEFPVAVVL
Run BLAST on NCBI

transcript from alignment at scaffold_13:190530..205021-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047496 ID=TCONS_00047496|Name=TCONS_00047496|organism=Clytia hemisphaerica|type=transcript|length=14492bp|location=Sequence derived from alignment at scaffold_13:190530..205021- (Clytia hemisphaerica)
TCCCTAAATATAACAAGAAGAAACCTGAACAGAATCAATATAGTGTCCAT TTCAAATATGAACTGTTACCACCTCATCCACCATTTCTGACCACTATATC TTTGAAAAGAAAGAATGTTATACTTTTAAATTCTGGAGATATGTTGTTTG CCATTCTGATACCTGAACCTTCAAGTTTATTTTCTTGCGAATCAGGAAAG GATATACAGACAAGATTGTGTTACTGCCAGCAACGCCAACAAGACGTGCT TGCAAACCAAAGCAACATAGATGTCAATTATGACGACTCGACTGATTATA TTTCATTCATAAATCAAGGATTTAATACAATAAATGATAACGATTCGCAA ACATCCCTTCCTGACTCTCCTTTTGATTGTATGACAACTGTAATACCATG TGCAATTACTACAGTTGATGGTTTGATACAGTTGAAGAATAGTTATGAAC ACAGATGCTTTCGACATGCTGATAAAGGTTAGGCTCATTGAGTTTAGATT CTATAGATGTATTTATGCTTTTATATTTTTGTTGTTTTCTACCCTGCACC ATATATGGCTAGGTACTAAAATGACTCTTTAGAAGGTCCAGTGTGATAGT GGTCAAGTGGTAGCATGCTTGAATACTTGCTGTCGATCAGTCAGTGATGG TAAACATCTGTCACAGGTCAGTAAATGTTATGTTAAGGTAACTACAATAC AATATCTCTCCAATAAAACAATGAACAATATCTCTCCAATAAAACAATGA ACAGTATTTATTCAATAACACAAGTAACGTTAACTATAAAACAATAAAAC AATGTACAATTTCACTTGTATAATTCCAAGCTCCTCCACAACCATTATTT TGTTAGTTATTGGTAGTCTAAAGGTAAAAGTATCACTATGGATTCTTGAG ATTAATGATTTTTTTTTTTACCTTTTTCAAATCGTATACCCTTCTTGGGA ATGTCCTGAAAACTTCAGGGTCATTGCATAAGTATTTGGGTTACATGAAG CACTTTAGTGCACTTAGATGCTATAAAAATCGGTCCAGACCGATCGGCCA AAAAGCGGTCAAATATCGGCTTTTTAGCTGCCAAGATTTCACTTTTACCG TTCCCGCCTCTATTTCTATCGGCTATGGATTGGCCACTCTTGTTTCACTT TTGAGGCGATTTTTGCGGCTTTGCCGATCGGGCTAAAGTCCGGTAAGAAG GCTGGGTCTATGCGTTTGCCGGCAACGAAAGAATAAAAACAATCATTTTT TAGTTCATTCTTTCTTTCTTTCATAAAGATCAAATTAAAGACAACTGATA GAATTATACAACTGCAATAAAAGGATTGACAAAAGAACTTCTTTTTATAA ACCATTATATTTCTGAAGCAAGACCGTTCCTTTGCTTTGTGGTCTCCATT TGTACTCAATTTATTCTGTCTTTATTCTTTTTTTAACGAAAAGATCCCCT GCCCCAATACGATCCCCGGGGGGTACTAGGGTTGCGAGACGGGGAGGGGG GGGTGTGCCGCCCAACTTTCGAACTTTGGACCCTTACCGGGACTAAAAAG GAGAAAACAAAGGAAAATTTTGGGAATTTTACGACCCTTAGCGGGACAAA TTTGACCAATTTTGACCAAATTTCGATCTTTCAGGGGGTAGAAAGTTGAA ATTTTTGCCGACCCTTAGCGGGACTTTGGAAATCCCTCGTAAAAAGACAA CCCTGTCTCAGTTTGACCCAGGCAGAAATGGATGTTGCGATTTTTGTCAT CTCAAAAAAGAAGCCGTTGCATTGTTTTCCGCGCGCGTTCTATTTTGTGC CAATCAAAATGCGTCACGTCACGCATTCGAAAAAATTCGAAAATGTTGCA ATCAAAACGAAAAGTGTTTCATTTGTGACTTTGGCTTTGAAAAGAAAACA TGAACTCTATAGAAACTAAAATTAAAAAAATATTGTGATTATTTCATCGC AACATTTCAAACAACTTCTGGAAAAGATCGAAGAACAGTTATAAAGTTAA TTAAATTGAGATTTGGTTGTAAAAGGTATGTATGTATATAAAAATTGAAT GACTTCTTCGAAATTCAGTTTCCGAAGGGCGCCTTTTATCTTTATTTTTA TCAATGGTGATTTATTTTTGGACATAAAAAACTCCCAATGATAACCAGTA AGTTTTTATTTATTTTGGAGATGAAAAATGCCAAAAGAAAACGAGAGAAG AAACAAAGTCTCAGCGATTTTGTAAGAAGAAGGGATTTCTTTTTCAAAGT AGCGCTATATAGACTATTTTCCTACAGCAATATTTGAAAATTAGGCTGCT AGTTTGCGAATCAAACCCAGCTCGAGGATTGATTTATTTTGTTGATCAAT GTTAAACATGTTTTAGAACTTTGAGTGATTTGTTATTTTTATAAGAATTC TAAACTAATTCACATGCGAAAATTGCTTATATCAGTACGTCAATCTAGAT TTTAGAAAAGTCACACGAAACTTCAGAGGACCTGGTCATAAGAAAATGTT CTTATAAAAGCTATAGGTTTATATACTGTACATCATTTTTTTAGCATTTT TTATCTTCTTTCTCCATGGGTATGTGGGGAAAATTGGCTCCAAATTATTA TTTCTCTGCAAGCTTTTTGTGTAACTTCAGTTTTCACAATTTTTCTGCTT CTGAAAAGTGACAAATCCCAAGAAAAATCAAAATCAAAATAACTTAAAAG ATTTTCTGTATCACTTTTTGGACCTACCTTGGAGGTCCTATAAATTAACC GATGTCCGTTCGTCCGTTCGTCTGTTCGTTCGTTCGTTCGTCCGTCCGTC TGTTACCAGCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN TTTTTCTGGCCGAAAATGCCGGAAATATGCCGGAAAAACTGGTTTTTTGG CATTTTCTCGAGATTTTATCATTAGTTTTTTCTGATTTTTTTGCTCAAAG ATGCGTATTAAATATTGTTCAAAACATGGCCGAGTTTGATTTTTGAGGAA ATTTTTTTACGGCCGAAAATGCCGTAAATATGCCGTAAATCGCCGTTTTT CTGGATTTTCATTGGACTTTCTCCTTACAATTGTTTGTTTTTTCATTAAA NAGTTATGTACCGTTAGAATTGGAATGATATATTAGAGAGGCCCCCCAGC GGTTTGCGTGATGGCGTGATTGGGACTTTTTTCTTGCGTGATTAGGCGTG CCGCTGGGGGGGGGCTCATTAGAGGTGAACAATCTATATGACTAAAATGT TCACATTTGGGTGACAATAAAGCTCTAGCCCCGTTCTATTTATTGCATTC TATTAATGGTGACGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNGGTGCCAGGTATGTGCTGATGCACACAAGGTTTGG TTTTTAACCTTCCCAAGTCTCTGAATTATTTAAGGTACGAAAAACTTGAA AAGTCATAAAAATCTCTAAGAGTCACATTTTCGCCTTGTCTCTGTAACTG TAAGGGTAACTTTATTCTCTATTTTGTCTATGAATAATCAAAGACTTTGC GAAATTTTCGACTCTTGAGTCGTCTTGTATTTTTGTTGTTTTCTACCCTG CACCATATATGGCTAGGTACTAAAATGACTCTTTAGAAGGTCCAGTGTGA TAGTGGTCAAGTGGTAGCATGCTTGAATACTTGCTGTCGATCAGTCAGTG ATGGTAAACATCTGTCACAGGTCAGTAGATGTTATGTTAAGGTAACTACA ATACAATATCTCTCCAATAAAACAATGAACAATATCTCTCCAATAAAACA ATGAACAGTATTTATTCAATAACACAAGTAACGTTAACTATAAAACAATA AAACAATGTACAATTTCACTTGTATAATTCCAAGCTCCTCCACAACCATT ATTTTGTTAGTTATTGGTAGTCTAAAGGTAAAAGTATCACTATGGATTCT TGAGATTAATGATTTTTTTTTTTACCTTTTTCAAATCGTATACCCTTCTT GGGAATGTCCTGAAAACTTCAGGGTCATTGCATAAGTATTTGGGTTACAT GAAGCACTTTAGTGCACTTAGATGCTATAAAAATCGGTCCAGACCGATCG GCCAAAAAGCGGTCAAATATCGGCTTTTTAGCTGCCAAGATTTCACTTTT ACCGTTCCCGCCTCTATTTCTATCGGCTATGGATTGGCCACTCTTGTTTC ACTTTTGAGGCGATTTTTGCGGCTTTGCCGATCGGGCTAAAGTCCGGTAA GAAGGCTGGGTCTATGCGTTTGCCGGCAACGAAAGAATAAAAACAATCAT TTTTTAGTTCATTCTTTCTTTCTTTCATAAAGATCAAATTAAAGACAACT GATAGAATTATACAACTGCAATAAAAGGATTGACAAAAGAACTTCTTTTT ATAAACCATTATATTTCTGAAGCAAGACCGTTCCTTTGCTTTGTGGTCTC CATTTGTACTCAATTTATTCTGTCTTTATTCTTTTTTTAACGAAAAGATC CCCTGCCCCAATACGATCCCCGGGGGGTACTAGGGTTGCGAGACGGGGAG GGGGGGGTGTGCCGCCCAACTTTCGAACTTTGGACCCTTACCGGGACTAA AAAGGAGAAAACAAAGGAAAATTTTGGGAATTTTACGACCCTTAGCGGGA CAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAAGGA AAATTTTGGGAATTTTACGACCCTTAGCGGGACAAATTTGACCAATTTTG ACCAAATTTCGATCTTTCAGGGGGTAGAAAGTTGAAATTTTTGCCGACCC TTAGCGGGACTTTGGAAATCCCTCGTAAAAAGACAACCCTGTCTCAGTTT GACCCAGGCAGAAATGGATGTTGCGATTTTTGTCATCTCAAAAAAGAAGC CGTTGCATTGTTTTCCGCGCGCGTTCTATTTTGTGCCAATCAAAATGCGT CACGTCACGCATTCGAAAAAATTCGAAAATGTTGCAATCAAAACGAAAAG TGTTTCATTTGTGACTTTGGCTTTGAAAAGAAAACATGAACTCTATAGAA ACTAAAATTAAAAAAATATTGTGATTATTTCATCGCAACATTTCAAACAA CTTCTGGAAAAGATCGAAGAACATTTATAAAGTTAATTAAATTGAGATAT AGAAATTGAATGACTTTCTTGTCTTCGAAATTCAGTTTTCGAAGGAAGCC TTTTATCTTTATTTTTATCAATGGTGATTCATTTTTGGACATAAAAAACT CCCAAGGATAACTAGTAAGTTTTTATTTATTTTGGAGATGAAAAATGCCA AAAGAAAACGAGAGAAGAAACAAAGTCTCAGCGATTTTGTAAGAAGAAGG AATTTCTTTTTTAAAGTAGCGCTATATAGCAATATTTAAAAATTAGGCTG CTAGTTTGCGAATCAAACTCAGCTCGAGGATTTATTTATTTTGTTGATCA ATGTTAAACAAATTTTAGAACTTTGAGTGATATTTGTTATTTTTATAAGA ATTCTAAACTAATTCACATGCGAAAATTGCTTATATCCGTACGTCAATCT GAGATTTTAGAAAAGTCACACGAAACTTCAGAGGACCTGGTCGTAAGAAA ATGTTCTTATAAGCTATAGGTTTATATACTGTACATCATTTTTTTAGCAT TTTTTATCTTCTTTCTCCAGGGGTATGTGGGGAAAATCGGCTCCAAATTA TTATTTCTCTGCAAGCTTTTTGTGTGTAACTTCAGTTTTCACAAGCAAGA ATTTTTCTGCTTCTGAAAAGTGACAAATCCCAAGAAAAATCAAAATCAAA ATAACTTTTCTGTATCACTTTTTTTCTTTGTTTTTATCTTTTCTGTCTTT TCAAAACAAAACATTCGAATCTTGATCAAAACAAAGCAATATTGAAACGC ATTCGTCAAATGTCTTCTTTTTTGTCTCAATCGAACGCGTGATGTCTCTT GTCCAATGAAATCGCTAGAATCTTACTGATGCGGGATAATTGTGCCTTCT CCTTGACTATGCCCCTGCCTTACCTCCTTTATATTCTCGATATTTTGTTT ATCCTTCGAAACTATAAGTTAACCTTATGATAAACATTCGAACTTCAATA TTCTTAACTGATCATATCAGCTATCGACTGTCATAGACTGGAGTCGTTTA TAATGCGTGTAATACTAATAATACCAATACTACTAATAATAATACGGGAT TTAGTTTGTATAAACGACTGGAAGAATCCGGTGNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGGCTAGCTACGCAGAAAC TTGCGTAGCGAGAAAACAATTTATCAAGCAAAAACAAACTCTCAAAACGA AATCAACTCAAATGAAAAACTTTCAATACACAAAGCCACACATACTTTTT TTCTCAAGAATTATTTTGAGCAGGAAAAAAATATAATTGCAATATTGACA CTTTTCTTTTGTTTGGACTTAGTGCACAAAGGTTTCTAGACGACTAAAAT TGTTCCATTAATTACTTTTTGCTTTATTTCTACTATGTATAAATTAGTCG TCTAGCTTGCTAGACTACGACTGTCATTGAAAAATCTCGACAGTCAATAA AAAGTATAGACACTAGATAAAACTTTTTTGCTGTCATACATAATGGCGGC CAGCGAAAAGACAGCAACCCGGTAACTTGGCCGATTTATGAAGCTGCTAA GGCCGCTTTAATAAGCCACTTTCTGTAGCGGACTTTTATCGGCCTTAAAT ATTTCCCGAAAGGCCTAAGCGGGCAAAAAGCCGGCCACGGGCCGGTAAAA GAAAGTGAGGTCTTTTAGCCGATCGGCTTTTCAGATACTTAAAATCGTTC GGGGAGTCACATTTTTTAGTCATTTTCTGGTGAAAATGGGTCAAATTTAG TGGTTTTAATTGGTTACGCTAAACAGCCGGGATGACGCCATCCAATACCA TGGAATTCGGAAATATATGTAATAAATGATATTTTTGTGGACAATTTATG TTTGGGAGCTTATTGTAGATTTAGTTTTGCTAAAAGAGTGAAAAAACGAT TTTTGATGTTTTTTTAATGAGAAATCCATTCCTGTTTCCTTTTTTGCTGA TTTCCTGGAAACGTTAACATCGACGTTATTGTAGGGGGGGTCCAAAAATG ACTTTTTTTGGAAATTTTGATGTTTAACCATCTTTTTTATATTAATTTTT CATGCTGATTCCGAATTTGAAATCCATTTTTCCATATCTCTTACCCCTGG GCGGCTACCGGAGACCCTTTTTTGGAAAACCGCCCAAAACCGCAAAAGTC AATGTTTTTGAAATTTTCCATTATGAATAGCTTTCTAGTGATGTGATATC TTTTTTAAATCAGTTTTTCATGCTGATTCCGAATCTGAAATTATTTTTGT CATAGCTCTAACCCTCGGCCTGGTATAGGAGGCTGTTTTTTTACTAAAAT CTTCGAAACTAAGGAAAATTGATAATTTGAAAATGTTTCACTTTGAATGA ACTATGAATGAAAAATTTAATGATAACTACTTGTTTTAGATCAAGTTTTC ATGCTGATTTCAAATTTGAAATTAGTTTCTGCATATCTCCGGCCACTGAC CTGCTATGGGGCCGGCTACATGAGGTTCCTTATTCAGAAAATATTGCAAA AAATGTGCAAAAGTCGATATTATTGAAAGGATATTTCTAAGCTTTTAGTT TGTCTGTGGCTTTTTGACACTTGGCTAATGTTATACATTCATCGTCATAG GGTGTCTTGAGTACTTTATCTTTATCCAATGAGCTAACCCTTTGTATTGC TGCTATTAATTTATCTGCTCAACTAGTCATGAGGCAAAATTCATCCTGCT TAGAATCTCGTTTAAACTATCTTGAGCTAGTGAACTCCTTTCAAATACAA TGATTCCCTAAATTAATTGAACATTGAAAAGTTGATAATTGTTAAAGCCT TAATCGTTTAAGGGGTAAGTTAAATCACTTAAATTAGTTAAATTAGTTAA ATCAATTAAAATCACTAGATTATACATATAGCTAATATATGGAATTTTTT AAATAATTTTAATTCAAACAAGGCATTATAAGAACAGGTTTATAGTGAAT CTATTGAAAGATACCAATGTTTAAGAAATATAACCTATTCCTAAAAAGTA ACTTCCAAATAAATGGACCAATATGAAAGCATTTACATGGTTGTCTCCCT GGAAAGGAGGGACGTTTTACTACTTAGAAGTTCACAAGATAATTTAATTT CTCAAAACTTTTTTCTAATTAACTTCTCAAAGAACCCTTGTTTTAACAGA TAGTCATATTTGTGGAAGTCCTTAATAAATGACACCAATGATATTGTAAT TAAATCAACAGCTTAAGGTCTGATTTATTTTTAAAAAGCATTAGTTCTTC AAATCTATTCAAGCAAGTATTTAAGGGATGGATAAAACAATAGCGCCTTT TGATTGGTTCAATAAACAACTATTCGAATGTAGAATTTTTAGATTCTATC TATTCGGTATAAGGTCTATACATCCCTATGATTTTCATGGTAACTTAACC TTTCAAACAATGATATACGGCTTGTTAAAGCCAATATCAACTTTTGAATG TCCAATGCGGTCAATCATTGCATTTGGAAGAAGTTTACTAGCTCAAGATA TTTTTACCAATTTGATTTTTACATCTTTGATTATATTCTAAGCAGACAAA TTAAAAGCAGCTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGAACCTCATGTAGCCGGCCC CGTAGCAGGCCATGGGTATGAGATATGCAAAAACTGATTTGAAATTCGGA ATCAGCATGAAAATCTGATCTAAAACAGGTTGTTATCATTAAATTTTTCA TTTAAAGTTCATTCAAATTCAAACATTTTCAAATTATCAATTTTCCTTAG TTTCGAAGATTTTAGTAAAAAAACAGCCTCCTATACCAGGCCGAGGGTTA GAGCTATGACAAAAAGAATTTCAGATTCGGAATCAGCATGAAAAACTGAT TTAAAAAAGATATCACATCACTAGAAAGCTATTCAAAATGGAAAATTTCA AAAACATTGACTTTTAGCGGTTTTGGGCGGTTTTCCGAAAAAAGAGTCTC CGGTAGCCGCTCAGGGGTAAGAGATATGGAAAAACGGATTTCAAATTCGG AATCAGCATGAAAAATTAATTTAAAAAAGATGGTTAAACTCAAAAAGTGT AATTTTGGACCCCCCCTATATTGGATATTTCTCAGGAACGGGTAGAGTAA AAGACTTGAAATTTTCAGGAATTGTTCCTTATGAGTTTTGGCAGAGGATA TAAGAAATAATTTTTCAAAAATCTCATTTCCTGGTTTTTAATCTCAAAAA ATCCTCTTTTAGGTTCCAGACTCCCTGGCGCAAAATTGAAAATTCTTTGT TTATGTATCCTCTAGCTTTCCTAAATACAAACCTGTATGCCAAATTTCAT TCATCAATTATTTCTAGATCTTATAAAAAATTACATAGCTCCCTCCCCCC CCCCCCGACTGTAAAACCCCTATGGTATTAGTACTTATGTATGATTACTT ATGATTTAGCTTTTTTCACTTTAGGAGAAATGTCCAAATGTGACTTCTTC GTGAATCAAGCTCAATTGGATGCAGAAAACTTTATGAACACAGAGCTTCA AAAGAGAGAAGACATAAGCAAACGATTTGTTTCCCTCAAAGACTATGACA TGCAATTTATTGAGGTAATTGTTTTTTTTCCAAGGAACGTTTTAGAAAAT AGCTGTAAAAGCTTAGTAAAAGCTTTAAAACAGCAGAAATTATTTTTCAT TTTCAATAATTTTTCAATTTTTTTGAACTGTTTTGGATTGGATACATTTT CAAAAAAAGTTACACTTTTCATCATAGTGCACCTTTATATCAGAGAAAAT TTTTAATATTATGCTCCTAAAGTCTATTGTTATCATGTGGAAACCACCCA CAAGGGAATCACTATAATTACGTTGACATGTTTTCCACATTGTAGCAAAA AAAAAGAGTACAAAAGTATTTGTCTCTCGAATCTTCTGCAGTAGAATTTA TCAATTTATCGCCCTTTACTAAGATTTTTCAAAGTCTGTACTGAAAATCA AGTATTTGATGCAACCAATAGATTCAGCGCGAAAAGAAGATAAAGAAAAA TTGGGTTCTTTATAGTCTGAATCGCAGACCTCTATAAATATACTTCCTAT ATAGGTCTGCTTAATAGTGTACGGCGTGCCTTCCCGCTATGATGGCTTTT ATGGTGGCCGATTTTACCTTTTTTGGCGAGTTACGGAAAGGGACGAGTTT CATATATATGGCGAGTTAGAAAATAATAAAAATAAAAGAAGAGACAAAGA CACAAAAAATATGTTCTGTTTGACTTGTTATAAAAATAGGAGAGCTTGAA TAAAAAAAAATTAAACTAGTGTAGTGTACAGTGAATTCTATGAAAACTAG TTCTTTGAGTTCTATAAACATCAGCTTTCTGACTTCAATTTCACATCATG CATGAAAACTTAAGAATCCTACTCTCTAACCAAGAATCCTGCTCTCTAAC AAAGAACAAAGTAAATTTGACATACCTGTTGCTTTATTATAGTCTCCAAA GTGACAATACATGTTAAAACTTGAAAAAAATTCTTCAAGATCTTGTAACC AAAACATCAGCCAAAATCAAAACAAACAAAAATCTTAATTTGAATCATTA TTTCATGCTACTGAGACACAACTTTCCCTTGATGTATTCCATAGATACAA CTTAAACATAAATTTACACATACAAAGCTTTTAACTCTAAAATTATAACT TCCAAAAACCAAAATAAACTCCAAAAAAGAGAAAATCTCTACTTCGCTTC GGCAGCCATATTGGATTCAAAATATGAATGATTAAGCTAGCCTGCACCAA ACTAATACGATACTTTTTAATATCGGTAAAATGATGAAAATATTTGTTAT TAGTTTGTTGCAGGCTATGAAGAATCTAAATCGTAACGAGGAGAGTTCCT TCAGAAGTTAATCATCATAAGCTGAAGCGCTCGCCAGCTTAAAATGTTGT TTGCCGAAATTCGGCGAAAAGCGGCATACCTTATCGGGGAAAATAATGTC GGGGGAAAGTGACGAATTTTTTCCCCGATATTTTATCACCCGACCAAAAC TTTTACCTGATTTTTTATCCCCGACTAAAACTTTTACCCAATTTTTTAAA CCCCAACCAAAATTGAAATCTAAATTTTTCACACCTTTATTAACCAAAAT AAGTGCTTTAAACGTAGAATTACAAGATCTTTTTTCGAGCTAGTGAAGGA AACCATTTCATTTGGACAATTTAGTTGGGTGAAAGTGACTAAATAGTAAA TTTGGTCGGGGAAAAGTGACGAATTTGAAATTTTGGTCAGGGGAGAGCGA CGAAAATGCCTCTAGGTGACGAAATTTTTCCCGACGAAAAAAAACCCCGA CTAAATAAAACTCCGACATTTTTTTCCCCGATAAGGTATTCTGGGAAAAA GGATCTACCGAGTATTAAACAGGCTCTATAAGAAACCTTTTTCGCTAGAA GATGACCAGTAGCCTAGATTCTTAATTAAATTTCGACAATCTGGTGCCGA GAAATGGCCTTTTAAGGTGAAAAATCAACGTTTTTGGTGTTTTCCGAAGT ATTTTCAGGGAACATTTTCAAAAAACAACCTCACAGCTGGACTTAGTAGT ATCCAAAAGTGAAAAGGTTTGTTAACTTCGGTCAATTAACTAAAAATCTA TTCATTTGAAAACTGCAGGAGTTTCGAGATTCAATTCTTTGTTAATTCTA CACCCTATTAGGAGCTAAATATCAAAATTTTCCCTGACCAAAGGGGTGCC CTACACAATTCACTACCTCGGCTGCTGGTTTATTTTTTAACCTAAGCTTT AAAAGAGAGTCCTTGGTAGTTAGCCAGGTGCTAAAGTAAACGTCAAATTA CCTAGTCCCTTAGTCAATACGTTTAAAACTGAATTGCTGCTAAAGGTCAT TGACATTTTTCTTGAATTCATTTTCAATCAATCGAATATCATAATTTTAG TTCTGCACTGAAGACGACTCTGCTATCATTTTGATCAATGCATTGGTCGT TTTAAGAAACACTTGCAAACCACAAAATGATACTGCAACTAACAACCCCG AACCATCCGCGACCAAATTCGATCTATTCGAAGATTCGAAATCAATGAAA TTAGGGTTGTACACCGTTGGTTATATCTTGGCTTGGAATATATTCACTGG AGAAGTCAAAGTTTTGAGAGAATTACCAATCACCGAAAGACCAAGCAATT ACTGCAAGTGAGTTTATTTCAAATTGACAAAAAGGAAGTAAAGACAACGC TATTTACAATCAATTAAAAATTAAGCTAAATGTCTTTAGCATGATTTAAA AATACCCTCTATTTCACAACACATGACGTATCTATCCAGATCTATCCACT TACATTTTAGACCAAGAAACTTCGCTCCAAGTTTCTCTCAATCAACACAA CTCCGTAAAAAGTGGTTTGTTCCTTCATCAAAGACTTCTTCAATATCTGT GTTATCAAATCATACTGTATTGACTGGAAAATCAGTTCAGTTTCTCTTCC ATCCAGAGTTTCCCGTGGCTGTTGTTCTGTAAGATTGTTGTTGTGGAGCT TGACGTTCGTAAGATATCTCTCAGTATTTTACTTTTATTCTAGTTAGTTT TATTATCATTTTGTTTGGTTTACGAGCAGCGTTTTCTCCATGTGTTTTGT GCGATATAAATCATCTGTTTGATGATCTAACGAACTTCATTAAGCGAACA ATTAGAAAGAAACAAACGAACTACAAGTTGGATCTTCAGAAA

Coding sequence (CDS) from alignment at scaffold_13:190530..205021-

>TCONS_00047496 ID=TCONS_00047496|Name=TCONS_00047496|organism=Clytia hemisphaerica|type=CDS|length=4176bp|location=Sequence derived from alignment at scaffold_13:190530..205021- (Clytia hemisphaerica)
ACCAAGAAACTTCGCTCCAAGTTTCTCTCAATCAACACAACTCCGTAAAA
AGTGGTTTGTTCCTTCATCAAAGACTTCTTCAATATCTGTGTTATCAAAT
CATACTGTATTGACTGGAAAATCAGTTCAGTTTCTCTTCCATCCAGAGTT
TCCCGTGGCTGTTGTTCTGTAATTCTGCACTGAAGACGACTCTGCTATCA
TTTTGATCAATGCATTGGTCGTTTTAAGAAACACTTGCAAACCACAAAAT
GATACTGCAACTAACAACCCCGAACCATCCGCGACCAAATTCGATCTATT
CGAAGATTCGAAATCAATGAAATTAGGGTTGTACACCGTTGGTTATATCT
TGGCTTGGAATATATTCACTGGAGAAGTCAAAGTTTTGAGAGAATTACCA
ATCACCGAAAGACCAAGCAATTACTGCAAGAGAAATGTCCAAATGTGACT
TCTTCGTGAATCAAGCTCAATTGGATGCAGAAAACTTTATGAACACAGAG
CTTCAAAAGAGAGAAGACATAAGCAAACGATTTGTTTCCCTCAAAGACTA
TGACATGCAATTTATTGAGCCTAAATATAACAAGAAGAAACCTGAACAGA
ATCAATATAGTGTCCATTTCAAATATGAACTGTTACCACCTCATCCACCA
TTTCTGACCACTATATCTTTGAAAAGAAAGAATGTTATACTTTTAAATTC
TGGAGATATGTTGTTTGCCATTCTGATACCTGAACCTTCAAGTTTATTTT
CTTGCGAATCAGGAAAGGATATACAGACAAGATTGTGTTACTGCCAGCAA
CGCCAACAAGACGTGCTTGCAAACCAAAGCAACATAGATGTCAATTATGA
CGACTCGACTGATTATATTTCATTCATAAATCAAGGATTTAATACAATAA
ATGATAACGATTCGCAAACATCCCTTCCTGACTCTCCTTTTGATTGTATG
ACAACTGTAATACCATGTGCAATTACTACAGTTGATGGTTTGATACAGTT
GAAGAATAGTTATGAACACAGATGCTTTCGACATGCTGATAAAGACCAAG
AAACTTCGCTCCAAGTTTCTCTCAATCAACACAACTCCGTAAAAAGTGGT
TTGTTCCTTCATCAAAGACTTCTTCAATATCTGTGTTATCAAATCATACT
GTATTGACTGGAAAATCAGTTCAGTTTCTCTTCCATCCAGAGTTTCCCGT
GGCTGTTGTTCTGTAATTCTGCACTGAAGACGACTCTGCTATCATTTTGA
TCAATGCATTGGTCGTTTTAAGAAACACTTGCAAACCACAAAATGATACT
GCAACTAACAACCCCGAACCATCCGCGACCAAATTCGATCTATTCGAAGA
TTCGAAATCAATGAAATTAGGGTTGTACACCGTTGGTTATATCTTGGCTT
GGAATATATTCACTGGAGAAGTCAAAGTTTTGAGAGAATTACCAATCACC
GAAAGACCAAGCAATTACTGCAAGAGAAATGTCCAAATGTGACTTCTTCG
TGAATCAAGCTCAATTGGATGCAGAAAACTTTATGAACACAGAGCTTCAA
AAGAGAGAAGACATAAGCAAACGATTTGTTTCCCTCAAAGACTATGACAT
GCAATTTATTGAGCCTAAATATAACAAGAAGAAACCTGAACAGAATCAAT
ATAGTGTCCATTTCAAATATGAACTGTTACCACCTCATCCACCATTTCTG
ACCACTATATCTTTGAAAAGAAAGAATGTTATACTTTTAAATTCTGGAGA
TATGTTGTTTGCCATTCTGATACCTGAACCTTCAAGTTTATTTTCTTGCG
AATCAGGAAAGGATATACAGACAAGATTGTGTTACTGCCAGCAACGCCAA
CAAGACGTGCTTGCAAACCAAAGCAACATAGATGTCAATTATGACGACTC
GACTGATTATATTTCATTCATAAATCAAGGATTTAATACAATAAATGATA
ACGATTCGCAAACATCCCTTCCTGACTCTCCTTTTGATTGTATGACAACT
GTAATACCATGTGCAATTACTACAGTTGATGGTTTGATACAGTTGAAGAA
TAGTTATGAACACAGATGCTTTCGACATGCTGATAAAGACCAAGAAACTT
CGCTCCAAGTTTCTCTCAATCAACACAACTCCGTAAAAAGTGGTTTGTTC
CTTCATCAAAGACTTCTTCAATATCTGTGTTATCAAATCATACTGTATTG
ACTGGAAAATCAGTTCAGTTTCTCTTCCATCCAGAGTTTCCCGTGGCTGT
TGTTCTGTAATTCTGCACTGAAGACGACTCTGCTATCATTTTGATCAATG
CATTGGTCGTTTTAAGAAACACTTGCAAACCACAAAATGATACTGCAACT
AACAACCCCGAACCATCCGCGACCAAATTCGATCTATTCGAAGATTCGAA
ATCAATGAAATTAGGGTTGTACACCGTTGGTTATATCTTGGCTTGGAATA
TATTCACTGGAGAAGTCAAAGTTTTGAGAGAATTACCAATCACCGAAAGA
CCAAGCAATTACTGCAAGAGAAATGTCCAAATGTGACTTCTTCGTGAATC
AAGCTCAATTGGATGCAGAAAACTTTATGAACACAGAGCTTCAAAAGAGA
GAAGACATAAGCAAACGATTTGTTTCCCTCAAAGACTATGACATGCAATT
TATTGAGCCTAAATATAACAAGAAGAAACCTGAACAGAATCAATATAGTG
TCCATTTCAAATATGAACTGTTACCACCTCATCCACCATTTCTGACCACT
ATATCTTTGAAAAGAAAGAATGTTATACTTTTAAATTCTGGAGATATGTT
GTTTGCCATTCTGATACCTGAACCTTCAAGTTTATTTTCTTGCGAATCAG
GAAAGGATATACAGACAAGATTGTGTTACTGCCAGCAACGCCAACAAGAC
GTGCTTGCAAACCAAAGCAACATAGATGTCAATTATGACGACTCGACTGA
TTATATTTCATTCATAAATCAAGGATTTAATACAATAAATGATAACGATT
CGCAAACATCCCTTCCTGACTCTCCTTTTGATTGTATGACAACTGTAATA
CCATGTGCAATTACTACAGTTGATGGTTTGATACAGTTGAAGAATAGTTA
TGAACACAGATGCTTTCGACATGCTGATAAAGACCAAGAAACTTCGCTCC
AAGTTTCTCTCAATCAACACAACTCCGTAAAAAGTGGTTTGTTCCTTCAT
CAAAGACTTCTTCAATATCTGTGTTATCAAATCATACTGTATTGACTGGA
AAATCAGTTCAGTTTCTCTTCCATCCAGAGTTTCCCGTGGCTGTTGTTCT
GTAATTCTGCACTGAAGACGACTCTGCTATCATTTTGATCAATGCATTGG
TCGTTTTAAGAAACACTTGCAAACCACAAAATGATACTGCAACTAACAAC
CCCGAACCATCCGCGACCAAATTCGATCTATTCGAAGATTCGAAATCAAT
GAAATTAGGGTTGTACACCGTTGGTTATATCTTGGCTTGGAATATATTCA
CTGGAGAAGTCAAAGTTTTGAGAGAATTACCAATCACCGAAAGACCAAGC
AATTACTGCAAGAGAAATGTCCAAATGTGACTTCTTCGTGAATCAAGCTC
AATTGGATGCAGAAAACTTTATGAACACAGAGCTTCAAAAGAGAGAAGAC
ATAAGCAAACGATTTGTTTCCCTCAAAGACTATGACATGCAATTTATTGA
GCCTAAATATAACAAGAAGAAACCTGAACAGAATCAATATAGTGTCCATT
TCAAATATGAACTGTTACCACCTCATCCACCATTTCTGACCACTATATCT
TTGAAAAGAAAGAATGTTATACTTTTAAATTCTGGAGATATGTTGTTTGC
CATTCTGATACCTGAACCTTCAAGTTTATTTTCTTGCGAATCAGGAAAGG
ATATACAGACAAGATTGTGTTACTGCCAGCAACGCCAACAAGACGTGCTT
GCAAACCAAAGCAACATAGATGTCAATTATGACGACTCGACTGATTATAT
TTCATTCATAAATCAAGGATTTAATACAATAAATGATAACGATTCGCAAA
CATCCCTTCCTGACTCTCCTTTTGATTGTATGACAACTGTAATACCATGT
GCAATTACTACAGTTGATGGTTTGATACAGTTGAAGAATAGTTATGAACA
CAGATGCTTTCGACATGCTGATAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030251XLOC_030251Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047496-exon-scaffold_13-1575043694:204545..205021TCONS_00047496-exon-scaffold_13-1575043694:204545..205021Clytia hemisphaericaexon
TCONS_00047496-exon-scaffold_13-1575043694:193658..193797TCONS_00047496-exon-scaffold_13-1575043694:193658..193797Clytia hemisphaericaexon
TCONS_00047496-exon-scaffold_13-1575043694:191065..191321TCONS_00047496-exon-scaffold_13-1575043694:191065..191321Clytia hemisphaericaexon
TCONS_00047496-exon-scaffold_13-1575043694:190530..190911TCONS_00047496-exon-scaffold_13-1575043694:190530..190911Clytia hemisphaericaexon
TCONS_00047496-exon-scaffold_13-1510915933:204545..205021TCONS_00047496-exon-scaffold_13-1510915933:204545..205021Clytia hemisphaericaexon
TCONS_00047496-exon-scaffold_13-1510915933:193658..193797TCONS_00047496-exon-scaffold_13-1510915933:193658..193797Clytia hemisphaericaexon
TCONS_00047496-exon-scaffold_13-1510915933:191065..191321TCONS_00047496-exon-scaffold_13-1510915933:191065..191321Clytia hemisphaericaexon
TCONS_00047496-exon-scaffold_13-1510915933:190530..190911TCONS_00047496-exon-scaffold_13-1510915933:190530..190911Clytia hemisphaericaexon
TCONS_00047496-exon-scaffold_13-1491911889:204545..205021TCONS_00047496-exon-scaffold_13-1491911889:204545..205021Clytia hemisphaericaexon
TCONS_00047496-exon-scaffold_13-1491911889:193658..193797TCONS_00047496-exon-scaffold_13-1491911889:193658..193797Clytia hemisphaericaexon
TCONS_00047496-exon-scaffold_13-1491911889:191065..191321TCONS_00047496-exon-scaffold_13-1491911889:191065..191321Clytia hemisphaericaexon
TCONS_00047496-exon-scaffold_13-1491911889:190530..190911TCONS_00047496-exon-scaffold_13-1491911889:190530..190911Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047496-proteinTCONS_00047496-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:190530..205021 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.97329 4.96481 2.50684 2.02686 1.27953 1.02047 1.20268 1.102 1.0023 0.91361 1.28566 0.629939 0.336962 1.65663e-06 0.729646 0.690169 0.511006 1.11144 0.350269 0.486687 0.642208 0.674019 1.3065 1.32786 3.80354 2.99224 0 0.578014 0.553647 0.859871
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR032734DCAF15_WD40
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047496 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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