TCONS_00047488 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047488
Unique NameTCONS_00047488
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1432

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047488 ID=TCONS_00047488|Name=TCONS_00047488|organism=Clytia hemisphaerica|type=transcript|length=1432bp
ggcggctGCAGCAGGGGTCACGAGGAAATTGCCCCTGAATGGCATCAAGG
TTTTGGAGCTTGCCGGGCTTGCCCCTGTACCATTTACAGGAATGATCCTT
GCAGATTTTGGAGCTAAAGTATGCCGAGTTAATCGAACCAATGAGAATTT
TACTTTGGACTCTCTTTCTCGTGGAAAACAATCAATTTGTTTGGacttaa
aatcttcaaaaggacagaatgtttttaaaagattggCATCTTCATCTGAT
GTTATTATCGAGCCTTTCAGACCAGGCATCATGGAAAAGCTTGGACTTGG
ACCAAATACATTACTGGAATCAAATGAGAGGCTTATCTATACACGTTTAA
ATGGGTATGGTACAAAACCAACACCTCTTTCACAGAAAGCTGGACACGAT
ATCAACTATTTAGCAATGACAGGTGTCTTGTCCATGTTGGGTcagaaagG
TAACAAACCTGAGCCACCGATCAATTTGCTTGGTGATTTTGCTGGAGGAA
GTATGATGGCTGTTATGGGAATAATGATGGCTTTGTTTGAAAGAAGTGTT
TCAGGAAAAGGCCAGGTTGTCGATGCGTCAATTACAGCGGGCGCGTCTTA
CGTATCATCTTTTCTACACCGATCACGTGACATTGGTATTTGGTTGGGTG
AGCGAGGCACGAACGTCTTGGACGGAGGGGCTCCTTTTTATCAAGTGTAC
CAAACGAAAGATGGAAAATATATGACAGTTGGGGCGATCGAACCACAATT
TTATCAAGAACTTTTAAAAGGTCTTGATGCAGAGGATGATGAAACGTTAT
CTGTTCAAATGAACGTATTAGAGTGGCCTAAAATGAAAACCAAAATGGAA
GACATTTTTGCTTCGAAGACGCAAGAAGAATGGTGCCAAGTCTTTGAAGA
CAAAGATGCTTGCGTCACACCGGTGCTAGATTTTCTTGACGCTCACGAAC
ACGCCCACAACAAGGCAGCTGGTTCGTTTATGTATAATCAAGAGCACGGG
CGTTATGAACCAACGCCCGCCCCTGAACTTTCTCGAACGCCCGCGCGTGA
GGAAATTTTGCCGGAACCGAATATAGGAGAACATACTGTCGAATATTtga
gaaatgagaattttacgAAAGCCGAGATTAACAAGTTATTAGATGAGGGT
ATTATCGAACAGTTTACACCAAAGGCATCTTTGTAATGGTCTCAACGAAC
GCTTTTCAAGAATTGTTGCTGAGACTTCATCACTAAGTATGCTGGAGCAA
TTTGGGATACAATATTATGTTTTTAGCATTCTCTTTCgattgttattttt
gattttgatttaattGTGCCGTCTCTAGAAGACTGGTGACttcttaaccc
tttccggacgcatgatttcacggctatatgacgcaaacaaaaattcgatt
tttgactGACTTTAcgaaaattgcaatagaaa
Run BLAST on NCBI

protein sequence of TCONS_00047488-protein

>TCONS_00047488-protein ID=TCONS_00047488-protein|Name=TCONS_00047488-protein|organism=Clytia hemisphaerica|type=polypeptide|length=394bp
AAAAGVTRKLPLNGIKVLELAGLAPVPFTGMILADFGAKVCRVNRTNENF
TLDSLSRGKQSICLDLKSSKGQNVFKRLASSSDVIIEPFRPGIMEKLGLG
PNTLLESNERLIYTRLNGYGTKPTPLSQKAGHDINYLAMTGVLSMLGQKG
NKPEPPINLLGDFAGGSMMAVMGIMMALFERSVSGKGQVVDASITAGASY
VSSFLHRSRDIGIWLGERGTNVLDGGAPFYQVYQTKDGKYMTVGAIEPQF
YQELLKGLDAEDDETLSVQMNVLEWPKMKTKMEDIFASKTQEEWCQVFED
KDACVTPVLDFLDAHEHAHNKAAGSFMYNQEHGRYEPTPAPELSRTPARE
EILPEPNIGEHTVEYLRNENFTKAEINKLLDEGIIEQFTPKASL
Run BLAST on NCBI

transcript from alignment at scaffold_13:106065..116776-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047488 ID=TCONS_00047488|Name=TCONS_00047488|organism=Clytia hemisphaerica|type=transcript|length=10712bp|location=Sequence derived from alignment at scaffold_13:106065..116776- (Clytia hemisphaerica)
GGCGGCTGCAGCAGGGGTCACGAGGAAATTGCCCCTGAATGGCATCAAGG
TTTTGGAGCTTGCCGGGCTTGCCCCTGTACCATTTACAGGAATGATCCTT
GCAGATTTTGGAGCTAAAGTATGCCGAGTTAATCGAACCAATGAGAATTT
TACTTTGGACTCTCTTTCTCGTGGAAAACAATCAATTTGTTTGGACTTAA
AATCTTCAAAAGGACAGAATGTTTTTAAAAGATTGGCATCTTCATCTGAT
GTTATTATCGAGCCTTTCAGACCAGGCATCATGGAAAAGCTTGGACTTGG
ACCAAATACATTACTGGAATCAAATGAGAGGCTTATCTATACACGTTTAA
ATGGTAAGAACTTCAATAAGTTGTTTGGAGAACGCGACAGCCTATTGAAT
AAGTTTGAATAAGGGGTCACTCACATATCGATTCTTCCCACGACTAACGT
CAAATTGACGCGAAGGGGTGGGTGGGTTAGAGTCTTTGACGCTAAGAAAT
TTCCCCAGAAATATCGATTTTTAATACGTTTATTCCGTGACAAATGTTAC
TTTCCACATTTCTTTTCCTATTTTTACATACCTAAATATTCGTTCGCTTG
CTATTTTACAAAAATTTTAACCGAAACAAACGGCCCGATGTTTACGTCTC
GAGTTTCTTTGTTCAGACGGTCTGCACGGCCCTTGAATTTCGCCGACGGT
CGGTCTATTTTTTGTGAAATGCGGCTTTTCTGTTGATTTTGATTATGGAG
ATAATTAATTCCGGCAACTTTCTGAAAAAAGTTTGGAAATTATCTCCATT
ATTTTTTAAATGTAAACTGCGTGAGCAAGCCGTAGCGAATTTAAAGATGG
CTGACGAAACAACGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGATAATGACACGTCTAA
TGTAAAACAGGCTTTAAGATAGATCTTCGTGTGAAGCAAGCCTTCTAATT
TTCGTGACTTCGTGATTCTTTTACACTGAACCATAACAAACAAAATGGCG
GCTGCAGCAGGGGTCACGAGGAAATTGCCCCTGAATGGCATCAAGGTTTT
GGAGCTTGCCGGGCTTGCCCCTGTACCATTTACAGGAATGATCCTTGCAG
ATTTTGGAGCTAAAGTATGCCGAGTTAATCGAACCAATGAGAATTTTACT
TTGGACTCTCTTTCTCGTGGAAAACAATCAATTTGTTTGGACTTAAAATC
TTCAAAAGGACAGAATGTTTTTAAAAGATTGGCATCTTCATCTGATGTTA
TTATCGAGCCTTTCAGACCAGGCATCATGGAAAAGCTTGGACTTGGACCA
AATACATTACTGGAATCAAATGAGAGGCTTATCTATACACGTTTAAATGG
TAGGAACTAAGTTGTTTGGAGAACGCGACACAGCCTATTGAATAAGTTTG
AATAACAAAGAAATTACTCCAAATAAATTACTTTCCCTCAGCCAATATAA
AAATGTGATAAATTATTTTGTCTCTAGGCAGTTAGTCACACTACTAGCAT
CCCGCCAAGATGTGTATCAAAGATTAATGCTGCGAAAGCACTTTATCGTT
TACTTCACTAGCAACCAAACAAAAGTTGTTATATAATTCTGTATAATTGT
TCGACCTGGAGAAAAGTCAGTTTAAAAAAAAAAGCTTTCGAACTGCTTTT
TCAAATTTAATGTACCATTAGTTGGTCTAATATCGACATCCCTCGTCCAA
TTCTGACACCCTTCTTTAGAGACAGGAATAATATGAAAGCTTGAATCACT
GATTGAAAAAGGATTAATCCTCTGTGACCACTAAGCAAAGACAAACAGTT
TCAACTTTTCTATCAATTTCAGCTGTTAAAAAGGGTGCCGGAATTAAAGG
AGGGATGTCAACATTAGACCAAGTTACGGCACGGTACGATAGCTCAAAAT
TCAAGTTAGGCGGCGGTCGAAAAATTGTTCTGTTCGCGTCGCAACAGGTG
TTAAAAATGCATGCGGGCGGACGGCTGGTCGGAAAAATTCCCGTTTTTTT
TTAAATTGCTTCTGTAAGTCAGGGGCAGGTGGTGACACAAACAGAACAAT
TTTCTGATGGTGGCCAGAGCGATCAAGAAAAAAGCTATACGTCAAAAGAA
CAATTTGCCAGAAAATCAGGGGAAAATATGATGCGGGCGGGTGATGCGAA
TAGAACAATTTTTCGATGGCCGCCTTAGATCATCCTCTATACGATTAATA
AAGAATGAACAAAAAATTTAAATCTTGAAGCTCACAATATTTCGACAAAC
CTGTAAACTTTTTTTTGGATGCACTCGGTACCGTCAACTGCTCTAACTTG
GGTTGATTGGTCAAAACATGGGACTGGTTGATATCTGGTCTGTATTTTCA
CTAACTCTTAAATCTCTTTGACGACAAATTTGTTTTCGTTTGACCAATTT
AAGATATATTACATATTTTTACCAAAAAGTTGTTATCCCCCTTTTTTTTA
TTTAATACCCCCTAAAAACTCAAAAGAAAATCTCTTATCCCCCCTATGAA
CCCTTTCTTGAGAAGTTGGATCCCCTTAAAGAAGGGGGGGTTCACACTTA
TGGCTAAATAAAAAACTAAATCCTGGAATATCGAAGTTCCAGCCGCACTG
TTCTGCTAGCTTTCTCAGCTCAATCCTCAACCCGCGCAAAACTTAGCAGC
AGCAGATCATTCCAATGGAAGTTGTTAGAATGTTAGTTAACACCAGCAGA
GTAAACGCATGTTTGGACTATGTACCCTATGCTGCACAAAGCACTTAATC
TAAAGTCCCCCAAAGCATGGCTTGGCAGCAGGTTTTAGGTGCCCCCTAAG
AATTCAGGTGACCCCTAAGATTTAGGTAACCCCTGGTTGCCAAATATTTT
AGGTGCCCCCTAAGAATTCAGGTGACCCCTAAGATTTAGGTAACCCCTGG
TTGCCAAATATTTTAGGTGACCCCTAAGTCAACACAGATTGCTTGAAAAT
GCACTCAAAACATGCACTTATAAGACAATTATGACAAATTAAAAAAGAAA
AAACTTTGCATTTTGCAAAATAACCATTTTCGAAAAAATTATTGGGGGCA
TAGCCCCCCTTGCCTCCCCCCCAGTTGCTACGGCACTGCAGATAATATAT
TAGATACCAAATTGTCAGTTTTTGAGCATTGCTTAGATTAAAATATAAGA
TGAGAAAGTGCCAACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTGCA
AAAGTTCTAGGAATGAAAATAAAGGGATAATGATAATTGAATACTATCCA
CTGATGATCCGCGGCACTATTGTAAAGCTAGAATCGCTTTGCGAGCGTAC
TCATCGCTTGAGAAAATGATTGACAGATTAAATTTTTTCACCCCCGCGGG
TGTTCTGCGAGCGTTCTCAGCTCAATCCTTGGACCGCGCTAAAATGGTAG
ACTTTGACAGGTCATTTCGATGGAAGTTTTTTGAATGTTTACAAGGCTCT
TGACAGAAAATCCTTTGTTTTATTGTCAATGATGACAGTGCTGTTATTAA
TTTTGTTAAATCTGACACATTGATGTTTGTAAGTGCACTTTGTAGTTTTG
ATTGAAGAATCATATTCTGGTTTTCATGTTATTATTAGATGCTGTTTTAG
AGCTTTAGAGCTAGGCTGACCGGACGGTCGTAATCGATCGATTAGTCAAC
GATGGGTATCGATGAGCAAGCGATTAATTTTGATTACCTTGTGGTTCGAC
TATTATCAATTATTCATCGATTGTCTATCGATGAGTTATCGATTGTTTGT
TATCAATGAGCTATCGATCAATATCGATTACCTTAAAGCATCGATCTTAT
CGATCTTATCGATTTTACATTGATTATTATCGATTAGATTTTAAAAAAGT
AGACTTTTTCGATTCTTCCTTTTTGAACTTTTCTTGTTGATAGGGACTTT
TAATTTTATCGTATCGATGAATAGCAGAATGATGAATTAGAGAGCATCAA
CTCAGTAACGTGGCCTGGCTCGACCTGCGTGGTTTTCACACAAACGCAAT
AATGAAAAATTTACCGCCAGATTTAGAAAAAATTATCACTCGAAAAGAAA
GAAATGGTGCACTAAGGCTTCACTTTTTCTTGCCGGAGCAAAATTGTCTA
TAATTAGCCCGCCATGCGATTTTTCTAACACTTTGCTGGTCTATTACTTC
GTAATTGTATATTACGAAGTGACGTCAATCTTCCGACACGAAATCATGAG
GGTAGGGATATAACGTTACTTACTCCAACAGGGCAAATTCAGGAAAGTTA
ATGCTCGCGAAAATTTCTTAATCTTAAAAATCTATAAATCAATAAATCAA
ATATATTTCAAGTTAAAAATTTTCCAAACATTAATAATAGTTTCATGCTG
CTTACAGCAACAATCGTCAGATGTGAATGAAAATCAAAAACATACTCTTT
CTTATCTACAGAAATTAAAAATTTAAAAAAATAGATTTAAGTGTTAAAAA
GTGATAAAATGATGCGTGCCTATTAAAAATAATTATCGAGTGTGTTAAAA
AAACAAAAGGAGTAAAATACTATTATTTGTCCGGTGGGACCTCTTTAGAA
TCTGTAAAACTCCAAAATGGTAGTCGAAATCGCCAATCTCGGAGTGTTAA
AGAGTCTCTCTCTCTCAAAGGAAAACATCAGTTGGGAAAATTGCATGCAT
TTCAATATAAGAAACGCCGAATCTAAGATCATCGCAGCACCTTCCGGGAA
TTGCGGTATGGACGAAATACTTTAGGCGTACAAATTTTCGCGAGCAGAAA
CTTTCGCGAGGTCGAACAATTTCGTCATTGGGTTTGTTGCTTGAGTCATT
ATGTAATGGTTTCCCTACTAATTTTTCGAGTCAAAATGGTACTGATCAGG
AGAGGTAAATTGAAGATTTTATAAAAATCAGCTGTCATAAAAGTATTAAA
TAACGAGAATCTCATTTCTTTAAAGTATTGAAATAAAATTTTAAAGAATT
CGATAAAACCAATTTTTTTATGAAATGAAAACCGCCCCAAAAGTACTTTA
ACAAACAAAATTTTTCATTTCTTCATAATAGGGTATGGTACAAAACCAAC
ACCTCTTTCACAGAAAGCTGGACACGATATCAACTATTTAGCAATGACAG
GTGTCTTGTCCATGTTGGGTCAGAAAGGTTTGTTTTTGAAAAATTTTCAC
TTTTTTGATTTATATGCCCCAGTAAATCAGTCTTGAAACCTGAAATCTTT
CTTATATTCCATCAACTATCTCTATCATTTAAGGCTTGGGGACACGAGAA
GTTTTTTTCGCGTTGGTGCAATGCAACATGCTCCATCTCACCAACCTGAA
GCGCTTTCTCGTGTCTAGTCGACAAAACTTTTAATAACATTTATGTGTTT
CTCACTTTTGTCCCATGGACAAAATCAGCGTGTCTTTTGGGTATTTCCCT
CACTTTTTGTCCCATAAAACCATAAAAGAAACCATGAGACATGCACTGTT
TTCTTGTGTTGGTGAGATGGAGCATGTTGCATTGCGCCAATGCGAAAAAA
ACTTCTTGTGTGCCCAAGCCTTTACTCTCGCGGAACTTTCATTTCAAAGT
TGGAAGGTTTGTTACAGTTGTTCCTATGACACACCTGATAAAGATTTATC
ATGGTTGGTGATAAGGGACGGGCTATAAAATCAATTTGTTTCTTGATCTG
ATGGTTAAAACAGACTTCTGTGTTCCTATTTGGATTCTTTTAAAATTTGT
AGCGAAAACTACTGTGATCCGCACGGCTTTAATTAACCTTTTTCATGGTT
CTATTAATTCCATGCAATTTCTGTATTGCCTAATAAATCAATAAGCTTTT
TGGATACTTATAGCCTTATCGGCGACGTTCTTAAATACAAATGCTAGAAA
AAGCCAATNATTTCTCACTTTTGTCCCATGGACAAAATCAGCGTGTCTTT
TGGGTATTTCCCTCACTTTTTGTCCAATAAAACCATAAAAGAAACCATGA
GACATGCACTGTTTTCTTGTGTTGGTGAGATGGAGCATGTTGCATTGCAC
CAATGCGAAAAAAACTTCTTGTGTGCCCAAGCCTTTACTCTCGCGGAACT
TTCATTTCAAAGTTGGAAGGTTTGTTACAGTTGTTCCGATGACACACCTG
ATAAAGATTTATCATGGTTGGTGATAAGGGACGGGCTATAAAATCAATTT
GTTTCTTGATCTGATGGTTAAAACAGACTTCTGTGTTCCTATTTGGATTC
TTTTAAAATTTGTAGCGAAAACTACTGTGATCCGCACGGCTTTAATTAAC
CTTTTTCATGGTTCTATTAATTCCATGCAATTTCTGTATTGCCTAATAAA
TCAATAAGCTTTTTGGATACTTATAGCCTTATCGGCGACGTTCTTAAATA
CAAATGCTAGAAAAAGCCAATTTTATATTTTATTTATATCATGATATTTT
TAGGTAACAAACCTGAGCCACCGATCAATTTGCTTGGTGATTTTGCTGGA
GGAAGTATGATGGCTGTTATGGGAATAATGATGGCTTTGTTTGAAAGAAG
TGTTTCAGGAAAAGGCCAGGTTGTCGATGCGTCAATTGTAAGTACCTTGA
TTGATTTTTCGACCTACCTTGGAGGTCCTTTAAATTAACCTTTCTTCGTT
CGTTCGTTCGTTCATCCGTCCTTTTGTTCGTCTGATGTGAACTTTTCTCA
GGATTGGCTTATTAGCTTTTCTGTTTTTTTTCATCATGATGTAAAATGGT
AATGTCGAAAATGTGAAAGAGCCCGATTTTCGAAAAAAGATTCCCCTCCG
GGAAAACCGGTTTTTAAGCATTTTCTCGAGATTTTATCATTAGTTTTTTC
TGAGTTTTTTCACTTTTCAATGAAATCTTGGTAGCCGGAACTTTCTAAGA
ACCGCAACAGTCGAGAATCGCCGGAAAAATGGTTTTTCTTTAATTTCTCG
AGTTGTATTTGTTGAGTTGGCATTTTCTTACTTTTGCTCCCATTTTTTCT
ATTTTTTTATTACATCAGCCTTCAGGTAGGTCCATTCAACATGAAACTTG
TTCTAATTGATCTTAAAATTTATTCATGATAAGTATGGACCCCTCTTAAC
CTCTCTATAATAACATTTGTAGAAACAAATCTTTAGGAATTTACTCTAAC
CCAATTACTGTATTACTTCAAATAAACGCCCCTCCTAAAAATCAAAAAAA
TTGATAAACACCCGAGCGTTTATTCGAATTAATACGGTACACTGACATGA
TTTCCATTTTAAAGCCTTAAGAGACCCTAAGTACAGTGGAGTCTCTTCAA
CTTGAACGTCTATGACGTCTCGAATGTCCCCTTAACTCGAAGTTTTATTG
ACGGCCCTATCAGACGGCCTTATAAACCTCACTCCAAACTCCAAACATCG
AACAAATTTGTGTTCCCCTTGTGTGTTCGAGTTATGGAGACTCAACTCGG
ATTGATTCTCCCAGATGAATTTGTAAGATTTATTAGCGTATAGCTTCCTT
TATCTGGAGAGAATTTTATTTTTCCACTTTATTACTGTGCAATTATTGCG
AACGTAGCCTTCGTGAAGAGCATTTTTATTTATCTCAATGAGACTGTTCA
TCTAACATTTCCAGACCATCTAAAAAGAACGACAAATAACTATAAAAAAG
CGACAAAAAGAACGACAAATATTTAAAGAAAGACAAATTTCATATTTCGC
CGTCCACAACCCCGACCGAAATTGACTGTACCACAGATTCATTCCTCTTT
CTTTATCACGGGAATTAACTGCATGTGGTTTAAAAGAACGGCAAATTACG
CTTGCGTGTAGTTCTCTATTTGGGTGAACTGGAAACATTACATGAACTAA
CTCCAATAACACCTTTTTGTAGACAGCGGGCGCGTCTTACGTATCATCTT
TTCTACACCGATCACGTGACATTGGTATTTGGTTGGGTGAGCGAGGCACG
AACGTCTTGGACGGAGGGGCTCCTTTTTATCAAGTGTACCAAACGAAAGA
TGGAAAATATATGACAGTTGGGGCGATCGAACCACAATTTTATCAAGAAC
TTTTAAAAGGTTTGTTAAATGTTTTTTGTATGTATGCGTGTTTTTTATAA
GCATTGCATTTATAAGCATATCAAGGCTCAAATAGGACAAAATTTAAAAC
ATATGCTTCATTACCCTTACCTTTATTTAGCTTGTCTTTTCAGGATTTTC
GGAATTTCCCTAAAATTTAGCTTAGGATATAAACATCCTTCAGGCATTTT
TCAGCCTTTCCAACCTCTCGATCTAAGCATGCTTACGTGAGATTATAAAA
AAAAATCATAATTATGATTTCTTTTTTTCAATTCTTAACTGCACTTTTCC
TATAAAGTAAAAAAAATAAAAAAACATCTCTAGAAGGAAAAATATATATA
TATTAGAGCTATGTAGGAAGATAATCAAACTAAAATAAGGCACCACTAAA
CCGTTCAGAGTCAAGAATAAATTCAATGACAAGATTAAACATGACAAAAA
GGAATCGATTTTATCCGTCAATATCTTTATTTTCTTATTACATTTGGTAG
GTCTTGATGCAGAGGATGATGAAACGTTATCTGTTCAAATGAACGTATTA
GAGTGGCCTAAAATGAAAACCAAAATGGAAGACATTTTTGCTTCGAAGAC
GCAAGAAGAATGGTGCCAAGTCTTTGAAGACAAAGATGCTTGCGTCACAC
CGGTGCTAGATTTTCTTGACGCTCACGAACACGCCCACAACAAGGCAGCT
GGTTCGTTTATGTATAATCAAGAGCACGGGCGTTATGAACCAACGCCCGC
CCCTGAACTTTCTCGAACGCCCGCGCGTGAGGAAATTTTGCCGGAACCGA
ATATAGGAGAACATACTGTCGAATATTTGAGAAATGAGAATTTTACGAAA
GCCGAGATTAACAAGTTATTAGATGAGGGTATTATCGAACAGTTTACACC
AAAGGCATCTTTGTAATGGTCTCAACGAACGCTTTTCAAGAATTGTTGCT
GAGACTTCATCACTAAGTATGCTGGAGCAATTTGGGATACAATATTATGT
TTTTAGCATTCTCTTTCGATTGTTATTTTTGATTTTGATTTAATTGTGCC
GTCTCTAGAAGACTGGTGACTTCTTAACCCTTTCCGGACGCATGATTTCA
CGGCTATATGACGCAAACAAAAATTCGATTTTTGACTGACTTTACGAAAA
TTGCAATAGAAA

Coding sequence (CDS) from alignment at scaffold_13:106065..116776-

>TCONS_00047488 ID=TCONS_00047488|Name=TCONS_00047488|organism=Clytia hemisphaerica|type=CDS|length=7110bp|location=Sequence derived from alignment at scaffold_13:106065..116776- (Clytia hemisphaerica)
GTCTTGATGCAGAGGATGATGAAACGTTATCTGTTCAAATGAACGTATTA
GAGTGGCCTAAAATGAAAACCAAAATGGAAGACATTTTTGCTTCGAAGAC
GCAAGAAGAATGGTGCCAAGTCTTTGAAGACAAAGATGCTTGCGTCACAC
CGGTGCTAGATTTTCTTGACGCTCACGAACACGCCCACAACAAGGCAGCT
GGTTCGTTTATGTATAATCAAGAGCACGGGCGTTATGAACCAACGCCCGC
CCCTGAACTTTCTCGAACGCCCGCGCGTGAGGAAATTTTGCCGGAACCGA
ATATAGGAGAACATACTGTCGAATATTTGAGAAATGAGAATTTTACGAAA
GCCGAGATTAACAAGTTATTAGATGAGGGTATTATCGAACAGTTTACACC
AAAGGCATCTTTGTAAACAGCGGGCGCGTCTTACGTATCATCTTTTCTAC
ACCGATCACGTGACATTGGTATTTGGTTGGGTGAGCGAGGCACGAACGTC
TTGGACGGAGGGGCTCCTTTTTATCAAGTGTACCAAACGAAAGATGGAAA
ATATATGACAGTTGGGGCGATCGAACCACAATTTTATCAAGAACTTTTAA
AAGGTAACAAACCTGAGCCACCGATCAATTTGCTTGGTGATTTTGCTGGA
GGAAGTATGATGGCTGTTATGGGAATAATGATGGCTTTGTTTGAAAGAAG
TGTTTCAGGAAAAGGCCAGGTTGTCGATGCGTCAATTGGTATGGTACAAA
ACCAACACCTCTTTCACAGAAAGCTGGACACGATATCAACTATTTAGCAA
TGACAGGTGTCTTGTCCATGTTGGGTCAGAAAGGCTTATCTATACACGTT
TAAATGGCGGCTGCAGCAGGGGTCACGAGGAAATTGCCCCTGAATGGCAT
CAAGGTTTTGGAGCTTGCCGGGCTTGCCCCTGTACCATTTACAGGAATGA
TCCTTGCAGATTTTGGAGCTAAAGTATGCCGAGTTAATCGAACCAATGAG
AATTTTACTTTGGACTCTCTTTCTCGTGGAAAACAATCAATTTGTTTGGA
CTTAAAATCTTCAAAAGGACAGAATGTTTTTAAAAGATTGGCATCTTCAT
CTGATGTTATTATCGAGCCTTTCAGACCAGGCATCATGGAAAAGCTTGGA
CTTGGACCAAATACATTACTGGAATCAAATGAGAGGTCTTGATGCAGAGG
ATGATGAAACGTTATCTGTTCAAATGAACGTATTAGAGTGGCCTAAAATG
AAAACCAAAATGGAAGACATTTTTGCTTCGAAGACGCAAGAAGAATGGTG
CCAAGTCTTTGAAGACAAAGATGCTTGCGTCACACCGGTGCTAGATTTTC
TTGACGCTCACGAACACGCCCACAACAAGGCAGCTGGTTCGTTTATGTAT
AATCAAGAGCACGGGCGTTATGAACCAACGCCCGCCCCTGAACTTTCTCG
AACGCCCGCGCGTGAGGAAATTTTGCCGGAACCGAATATAGGAGAACATA
CTGTCGAATATTTGAGAAATGAGAATTTTACGAAAGCCGAGATTAACAAG
TTATTAGATGAGGGTATTATCGAACAGTTTACACCAAAGGCATCTTTGTA
AACAGCGGGCGCGTCTTACGTATCATCTTTTCTACACCGATCACGTGACA
TTGGTATTTGGTTGGGTGAGCGAGGCACGAACGTCTTGGACGGAGGGGCT
CCTTTTTATCAAGTGTACCAAACGAAAGATGGAAAATATATGACAGTTGG
GGCGATCGAACCACAATTTTATCAAGAACTTTTAAAAGGTAACAAACCTG
AGCCACCGATCAATTTGCTTGGTGATTTTGCTGGAGGAAGTATGATGGCT
GTTATGGGAATAATGATGGCTTTGTTTGAAAGAAGTGTTTCAGGAAAAGG
CCAGGTTGTCGATGCGTCAATTGGTATGGTACAAAACCAACACCTCTTTC
ACAGAAAGCTGGACACGATATCAACTATTTAGCAATGACAGGTGTCTTGT
CCATGTTGGGTCAGAAAGGCTTATCTATACACGTTTAAATGGCGGCTGCA
GCAGGGGTCACGAGGAAATTGCCCCTGAATGGCATCAAGGTTTTGGAGCT
TGCCGGGCTTGCCCCTGTACCATTTACAGGAATGATCCTTGCAGATTTTG
GAGCTAAAGTATGCCGAGTTAATCGAACCAATGAGAATTTTACTTTGGAC
TCTCTTTCTCGTGGAAAACAATCAATTTGTTTGGACTTAAAATCTTCAAA
AGGACAGAATGTTTTTAAAAGATTGGCATCTTCATCTGATGTTATTATCG
AGCCTTTCAGACCAGGCATCATGGAAAAGCTTGGACTTGGACCAAATACA
TTACTGGAATCAAATGAGAGGTCTTGATGCAGAGGATGATGAAACGTTAT
CTGTTCAAATGAACGTATTAGAGTGGCCTAAAATGAAAACCAAAATGGAA
GACATTTTTGCTTCGAAGACGCAAGAAGAATGGTGCCAAGTCTTTGAAGA
CAAAGATGCTTGCGTCACACCGGTGCTAGATTTTCTTGACGCTCACGAAC
ACGCCCACAACAAGGCAGCTGGTTCGTTTATGTATAATCAAGAGCACGGG
CGTTATGAACCAACGCCCGCCCCTGAACTTTCTCGAACGCCCGCGCGTGA
GGAAATTTTGCCGGAACCGAATATAGGAGAACATACTGTCGAATATTTGA
GAAATGAGAATTTTACGAAAGCCGAGATTAACAAGTTATTAGATGAGGGT
ATTATCGAACAGTTTACACCAAAGGCATCTTTGTAAACAGCGGGCGCGTC
TTACGTATCATCTTTTCTACACCGATCACGTGACATTGGTATTTGGTTGG
GTGAGCGAGGCACGAACGTCTTGGACGGAGGGGCTCCTTTTTATCAAGTG
TACCAAACGAAAGATGGAAAATATATGACAGTTGGGGCGATCGAACCACA
ATTTTATCAAGAACTTTTAAAAGGTAACAAACCTGAGCCACCGATCAATT
TGCTTGGTGATTTTGCTGGAGGAAGTATGATGGCTGTTATGGGAATAATG
ATGGCTTTGTTTGAAAGAAGTGTTTCAGGAAAAGGCCAGGTTGTCGATGC
GTCAATTGGTATGGTACAAAACCAACACCTCTTTCACAGAAAGCTGGACA
CGATATCAACTATTTAGCAATGACAGGTGTCTTGTCCATGTTGGGTCAGA
AAGGCTTATCTATACACGTTTAAATGGCGGCTGCAGCAGGGGTCACGAGG
AAATTGCCCCTGAATGGCATCAAGGTTTTGGAGCTTGCCGGGCTTGCCCC
TGTACCATTTACAGGAATGATCCTTGCAGATTTTGGAGCTAAAGTATGCC
GAGTTAATCGAACCAATGAGAATTTTACTTTGGACTCTCTTTCTCGTGGA
AAACAATCAATTTGTTTGGACTTAAAATCTTCAAAAGGACAGAATGTTTT
TAAAAGATTGGCATCTTCATCTGATGTTATTATCGAGCCTTTCAGACCAG
GCATCATGGAAAAGCTTGGACTTGGACCAAATACATTACTGGAATCAAAT
GAGAGGTCTTGATGCAGAGGATGATGAAACGTTATCTGTTCAAATGAACG
TATTAGAGTGGCCTAAAATGAAAACCAAAATGGAAGACATTTTTGCTTCG
AAGACGCAAGAAGAATGGTGCCAAGTCTTTGAAGACAAAGATGCTTGCGT
CACACCGGTGCTAGATTTTCTTGACGCTCACGAACACGCCCACAACAAGG
CAGCTGGTTCGTTTATGTATAATCAAGAGCACGGGCGTTATGAACCAACG
CCCGCCCCTGAACTTTCTCGAACGCCCGCGCGTGAGGAAATTTTGCCGGA
ACCGAATATAGGAGAACATACTGTCGAATATTTGAGAAATGAGAATTTTA
CGAAAGCCGAGATTAACAAGTTATTAGATGAGGGTATTATCGAACAGTTT
ACACCAAAGGCATCTTTGTAAACAGCGGGCGCGTCTTACGTATCATCTTT
TCTACACCGATCACGTGACATTGGTATTTGGTTGGGTGAGCGAGGCACGA
ACGTCTTGGACGGAGGGGCTCCTTTTTATCAAGTGTACCAAACGAAAGAT
GGAAAATATATGACAGTTGGGGCGATCGAACCACAATTTTATCAAGAACT
TTTAAAAGGTAACAAACCTGAGCCACCGATCAATTTGCTTGGTGATTTTG
CTGGAGGAAGTATGATGGCTGTTATGGGAATAATGATGGCTTTGTTTGAA
AGAAGTGTTTCAGGAAAAGGCCAGGTTGTCGATGCGTCAATTGGTATGGT
ACAAAACCAACACCTCTTTCACAGAAAGCTGGACACGATATCAACTATTT
AGCAATGACAGGTGTCTTGTCCATGTTGGGTCAGAAAGGCTTATCTATAC
ACGTTTAAATGGCGGCTGCAGCAGGGGTCACGAGGAAATTGCCCCTGAAT
GGCATCAAGGTTTTGGAGCTTGCCGGGCTTGCCCCTGTACCATTTACAGG
AATGATCCTTGCAGATTTTGGAGCTAAAGTATGCCGAGTTAATCGAACCA
ATGAGAATTTTACTTTGGACTCTCTTTCTCGTGGAAAACAATCAATTTGT
TTGGACTTAAAATCTTCAAAAGGACAGAATGTTTTTAAAAGATTGGCATC
TTCATCTGATGTTATTATCGAGCCTTTCAGACCAGGCATCATGGAAAAGC
TTGGACTTGGACCAAATACATTACTGGAATCAAATGAGAGGTCTTGATGC
AGAGGATGATGAAACGTTATCTGTTCAAATGAACGTATTAGAGTGGCCTA
AAATGAAAACCAAAATGGAAGACATTTTTGCTTCGAAGACGCAAGAAGAA
TGGTGCCAAGTCTTTGAAGACAAAGATGCTTGCGTCACACCGGTGCTAGA
TTTTCTTGACGCTCACGAACACGCCCACAACAAGGCAGCTGGTTCGTTTA
TGTATAATCAAGAGCACGGGCGTTATGAACCAACGCCCGCCCCTGAACTT
TCTCGAACGCCCGCGCGTGAGGAAATTTTGCCGGAACCGAATATAGGAGA
ACATACTGTCGAATATTTGAGAAATGAGAATTTTACGAAAGCCGAGATTA
ACAAGTTATTAGATGAGGGTATTATCGAACAGTTTACACCAAAGGCATCT
TTGTAAACAGCGGGCGCGTCTTACGTATCATCTTTTCTACACCGATCACG
TGACATTGGTATTTGGTTGGGTGAGCGAGGCACGAACGTCTTGGACGGAG
GGGCTCCTTTTTATCAAGTGTACCAAACGAAAGATGGAAAATATATGACA
GTTGGGGCGATCGAACCACAATTTTATCAAGAACTTTTAAAAGGTAACAA
ACCTGAGCCACCGATCAATTTGCTTGGTGATTTTGCTGGAGGAAGTATGA
TGGCTGTTATGGGAATAATGATGGCTTTGTTTGAAAGAAGTGTTTCAGGA
AAAGGCCAGGTTGTCGATGCGTCAATTGGTATGGTACAAAACCAACACCT
CTTTCACAGAAAGCTGGACACGATATCAACTATTTAGCAATGACAGGTGT
CTTGTCCATGTTGGGTCAGAAAGGCTTATCTATACACGTTTAAATGGCGG
CTGCAGCAGGGGTCACGAGGAAATTGCCCCTGAATGGCATCAAGGTTTTG
GAGCTTGCCGGGCTTGCCCCTGTACCATTTACAGGAATGATCCTTGCAGA
TTTTGGAGCTAAAGTATGCCGAGTTAATCGAACCAATGAGAATTTTACTT
TGGACTCTCTTTCTCGTGGAAAACAATCAATTTGTTTGGACTTAAAATCT
TCAAAAGGACAGAATGTTTTTAAAAGATTGGCATCTTCATCTGATGTTAT
TATCGAGCCTTTCAGACCAGGCATCATGGAAAAGCTTGGACTTGGACCAA
ATACATTACTGGAATCAAATGAGAGGTCTTGATGCAGAGGATGATGAAAC
GTTATCTGTTCAAATGAACGTATTAGAGTGGCCTAAAATGAAAACCAAAA
TGGAAGACATTTTTGCTTCGAAGACGCAAGAAGAATGGTGCCAAGTCTTT
GAAGACAAAGATGCTTGCGTCACACCGGTGCTAGATTTTCTTGACGCTCA
CGAACACGCCCACAACAAGGCAGCTGGTTCGTTTATGTATAATCAAGAGC
ACGGGCGTTATGAACCAACGCCCGCCCCTGAACTTTCTCGAACGCCCGCG
CGTGAGGAAATTTTGCCGGAACCGAATATAGGAGAACATACTGTCGAATA
TTTGAGAAATGAGAATTTTACGAAAGCCGAGATTAACAAGTTATTAGATG
AGGGTATTATCGAACAGTTTACACCAAAGGCATCTTTGTAAACAGCGGGC
GCGTCTTACGTATCATCTTTTCTACACCGATCACGTGACATTGGTATTTG
GTTGGGTGAGCGAGGCACGAACGTCTTGGACGGAGGGGCTCCTTTTTATC
AAGTGTACCAAACGAAAGATGGAAAATATATGACAGTTGGGGCGATCGAA
CCACAATTTTATCAAGAACTTTTAAAAGGTAACAAACCTGAGCCACCGAT
CAATTTGCTTGGTGATTTTGCTGGAGGAAGTATGATGGCTGTTATGGGAA
TAATGATGGCTTTGTTTGAAAGAAGTGTTTCAGGAAAAGGCCAGGTTGTC
GATGCGTCAATTGGTATGGTACAAAACCAACACCTCTTTCACAGAAAGCT
GGACACGATATCAACTATTTAGCAATGACAGGTGTCTTGTCCATGTTGGG
TCAGAAAGGCTTATCTATACACGTTTAAATGGCGGCTGCAGCAGGGGTCA
CGAGGAAATTGCCCCTGAATGGCATCAAGGTTTTGGAGCTTGCCGGGCTT
GCCCCTGTACCATTTACAGGAATGATCCTTGCAGATTTTGGAGCTAAAGT
ATGCCGAGTTAATCGAACCAATGAGAATTTTACTTTGGACTCTCTTTCTC
GTGGAAAACAATCAATTTGTTTGGACTTAAAATCTTCAAAAGGACAGAAT
GTTTTTAAAAGATTGGCATCTTCATCTGATGTTATTATCGAGCCTTTCAG
ACCAGGCATCATGGAAAAGCTTGGACTTGGACCAAATACATTACTGGAAT
CAAATGAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030247XLOC_030247Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047488-proteinTCONS_00047488-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047488-exon-scaffold_13-1575043694:116447..116776TCONS_00047488-exon-scaffold_13-1575043694:116447..116776Clytia hemisphaericaexon
TCONS_00047488-exon-scaffold_13-1575043694:115128..115150TCONS_00047488-exon-scaffold_13-1575043694:115128..115150Clytia hemisphaericaexon
TCONS_00047488-exon-scaffold_13-1575043694:110100..110195TCONS_00047488-exon-scaffold_13-1575043694:110100..110195Clytia hemisphaericaexon
TCONS_00047488-exon-scaffold_13-1575043694:108690..108823TCONS_00047488-exon-scaffold_13-1575043694:108690..108823Clytia hemisphaericaexon
TCONS_00047488-exon-scaffold_13-1575043694:107218..107404TCONS_00047488-exon-scaffold_13-1575043694:107218..107404Clytia hemisphaericaexon
TCONS_00047488-exon-scaffold_13-1575043694:106065..106726TCONS_00047488-exon-scaffold_13-1575043694:106065..106726Clytia hemisphaericaexon
TCONS_00047488-exon-scaffold_13-1510915933:116447..116776TCONS_00047488-exon-scaffold_13-1510915933:116447..116776Clytia hemisphaericaexon
TCONS_00047488-exon-scaffold_13-1510915933:115128..115150TCONS_00047488-exon-scaffold_13-1510915933:115128..115150Clytia hemisphaericaexon
TCONS_00047488-exon-scaffold_13-1510915933:110100..110195TCONS_00047488-exon-scaffold_13-1510915933:110100..110195Clytia hemisphaericaexon
TCONS_00047488-exon-scaffold_13-1510915933:108690..108823TCONS_00047488-exon-scaffold_13-1510915933:108690..108823Clytia hemisphaericaexon
TCONS_00047488-exon-scaffold_13-1510915933:107218..107404TCONS_00047488-exon-scaffold_13-1510915933:107218..107404Clytia hemisphaericaexon
TCONS_00047488-exon-scaffold_13-1510915933:106065..106726TCONS_00047488-exon-scaffold_13-1510915933:106065..106726Clytia hemisphaericaexon
TCONS_00047488-exon-scaffold_13-1491911889:116447..116776TCONS_00047488-exon-scaffold_13-1491911889:116447..116776Clytia hemisphaericaexon
TCONS_00047488-exon-scaffold_13-1491911889:115128..115150TCONS_00047488-exon-scaffold_13-1491911889:115128..115150Clytia hemisphaericaexon
TCONS_00047488-exon-scaffold_13-1491911889:110100..110195TCONS_00047488-exon-scaffold_13-1491911889:110100..110195Clytia hemisphaericaexon
TCONS_00047488-exon-scaffold_13-1491911889:108690..108823TCONS_00047488-exon-scaffold_13-1491911889:108690..108823Clytia hemisphaericaexon
TCONS_00047488-exon-scaffold_13-1491911889:107218..107404TCONS_00047488-exon-scaffold_13-1491911889:107218..107404Clytia hemisphaericaexon
TCONS_00047488-exon-scaffold_13-1491911889:106065..106726TCONS_00047488-exon-scaffold_13-1491911889:106065..106726Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:106065..116776 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.35717	7.37129	2.68385	0.000589907	5.71978	7.39676	2.29345	7.78144	1.18937	1.65744	1.85517	12.2389	0.822812	13.902	0.0643889	1.574	1.87094	11.9437	5.49561	0.0730665	5.89425	4.78579	13.0465	6.57776	12.1303	12.5092	1.29232	2.30262	1.57941	15.5768
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR023606CoA-Trfase_III_dom
IPR003673CoA-Trfase_fam_III
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
Blast
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BLAST of TCONS_00047488 vs. Swiss-Prot (Human)
Match: AMACR (Alpha-methylacyl-CoA racemase OS=Homo sapiens GN=AMACR PE=1 SV=2)

HSP 1 Score: 409.838 bits (1052), Expect = 2.498e-139
Identity = 201/385 (52.21%), Postives = 265/385 (68.83%), Query Frame = 2 
Query:   29 LPLNGIKVLELAGLAPVPFTGMILADFGAKVCRVNRTNENFTLDSLSRGKQSICLDLKSSKGQNVFKRLASSSDVIIEPFRPGIMEKLGLGPNTLLESNERLIYTRLNGYGTKPTPLSQKAGHDINYLAMTGVLSMLGQKGNKPEPPINLLGDFAGGSMMAVMGIMMALFERSVSGKGQVVDASITAGASYVSSFLHRSRDIGIWLGERGTNVLDGGAPFYQVYQTKDGKYMTVGAIEPQFYQELLKGLDAEDDETLSVQMNVLEWPKMKTKMEDIFASKTQEEWCQVFEDKDACVTPVLDFLDAHEHAHNKAAGSFMYNQEHGRYEPTPAPELSRTPAREEILPEPNIGEHTVEYLRNENFTKAEINKLLDEGIIEQFTPKASL 1183
            + L GI V+EL+GLAP PF  M+LADFGA+V RV+R    + +  L RGK+S+ LDLK  +G  V +RL   SDV++EPFR G+MEKL LGP  L   N RLIY RL+G+G   +   + AGHDINYLA++GVLS +G+ G  P  P+NLL DFAGG +M  +GI+MALF+R+ +GKGQV+DA++  G +Y+SSFL +++ + +W   RG N+LDGGAPFY  Y+T DG++M VGAIEPQFY+ L+KGL  + DE L  QM++ +WP+MK K  D+FA KT+ EWCQ+F+  DACVTPVL F +   H HNK  GSF+ ++E     P PAP L  TPA      +P IGEHT E L    F++ EI +L  + IIE    KASL
Sbjct:    1 MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGSRYDVSRLGRGKRSLVLDLKQPRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGS-FCRLAGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQVIDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQFYELLIKGLGLKSDE-LPNQMSMDDWPEMKKKFADVFAEKTKAEWCQIFDGTDACVTPVLTFEEVVHHDHNKERGSFITSEEQD-VSPRPAPLLLNTPAIPSFKRDPFIGEHTEEILEEFGFSREEIYQLNSDKIIESNKVKASL 382
The following BLAST results are available for this feature:
BLAST of TCONS_00047488 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AMACR2.498e-13952.21Alpha-methylacyl-CoA racemase OS=Homo sapiens GN=A... [more]
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