TCONS_00047449 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047449
Unique NameTCONS_00047449
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length189

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047449 ID=TCONS_00047449|Name=TCONS_00047449|organism=Clytia hemisphaerica|type=transcript|length=189bp
ATTCATTCGTTGTCGAGAAGGTTGTATCTGTTTCGATCAAAATGTTTGTT
TGGCCAAAGGTCTCAAAATGTGCCCGGTTTGTAGGAATGTTTTGCGATCA
GTGTGTTCGAAAGCCAGCTGTAAGATTGACGGTAAGAAGCCAACCATGCT
AGTACCCACAAAGAGCACTGGTGAAACAAAAGGAACAAA
Run BLAST on NCBI

transcript from alignment at scaffold_128:2937..3125

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047449 ID=TCONS_00047449|Name=TCONS_00047449|organism=Clytia hemisphaerica|type=transcript|length=189bp|location=Sequence derived from alignment at scaffold_128:2937..3125 (Clytia hemisphaerica)
TTTGTTCCTTTTGTTTCACCAGTGCTCTTTGTGGGTACTAGCATGGTTGG
CTTCTTACCGTCAATCTTACAGCTGGCTTTCGAACACACTGATCGCAAAA
CATTCCTACAAACCGGGCACATTTTGAGACCTTTGGCCAAACAAACATTT
TGATCGAAACAGATACAACCTTCTCGACAACGAATGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030217XLOC_030217Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047449-exon-scaffold_128-1491911889:2937..3125TCONS_00047449-exon-scaffold_128-1491911889:2937..3125Clytia hemisphaericaexon
TCONS_00047449-exon-scaffold_128-1510915933:2937..3125TCONS_00047449-exon-scaffold_128-1510915933:2937..3125Clytia hemisphaericaexon
TCONS_00047449-exon-scaffold_128-1575043694:2937..3125TCONS_00047449-exon-scaffold_128-1575043694:2937..3125Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_128supercontigscaffold_128:2937..3125 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047449 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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