TCONS_00047441 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047441
Unique NameTCONS_00047441
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2558

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047441 ID=TCONS_00047441|Name=TCONS_00047441|organism=Clytia hemisphaerica|type=transcript|length=2558bp
ATTTTAGACATCAATGTACATATTGGTTGTAAATAGCCACGTGTATCATA
ATACTctttatatataaaaataaatatatcatGAAGAACAAGTCTGCAGA
GACAACACAAAATGTCCTTCAAAAACATTCACAGGCAACAGAAGAACAAC
TCAGAGTTGCAAAACTTTCACAGATGACTAAAGACTCTCATGAAGAAGAG
ATAAAAATGGTTGCCGATATCACAAGGAAACCATTGGATATAGTCTCTTT
GGCACTTCATGACAGTAATTATGATACATCTGTGgcaatccaaaatattt
tcgaaGGGAAATATGAAGCTGAGGATGAATGGCaaacaaaaagtacaaaa
cGGAACAAAAAGTCAGGGCCTGTTTTAAATAACACCACTGACTTTGGTAA
CGATAAATTGGATGTCATTGATATAAAAGATAACGACCAAAAACCAaatg
atataaaaaatatatctcGTGGAGGAGGAACTTCTGGTACAAAAGGACGT
CCTTCATCTCATAACAGAAAAGATGATAGGTTCTCAGATGATAGACGAGA
TGGCTCTGAGGAGCGATCAACAGACTTTTCTCGTGATCGTATGAGAGGTT
CTGATCGTGGTGGACGTATGAGAGGGAGAGGCAGAGGAGGTGGTCGAGGA
GcttcaagaGGTGGTCGCGGAGGATTTGGTAGAGGTGGAGCCGCAAGAGG
GAGTGGAAGACCAGTCCGTGGTGCGGGAAGAGGTGGCAGAGGAGGCAGAC
GTGGTGATGGCCGTAGAGAAGAAAATGGTTTTGGTGAACCATTGGGCGGT
GGATTTGGTGCTCCATCAAGTGGATTTGGAGAACCAAGTTCTGGAGGGTT
TGGTGATCCTGCTGGAAGGTTTGGTCAACCTGTGAAAGAAGAAACTTGGG
ATGTTGACGAAAAGACAGAAGATTGGGGATTGGAAGATACAACCACTTCA
ACGACGACTGCAAACACAGAAACCAAACTCGAAACAGACTGGTCAAAAGA
CTGGGGCGATGAAGAGATGGAAGAGCTCGAAACGACAAATGAGAAAGTAG
ACAGTTTATTCTCACACAAGTTAGACTGGGGCCACGTCAATGGGAAAACC
GAAGAGAATTCATGGGCGGATAAAGAACAACCTTCAAATACGTTGCCTGC
AATGGATTCTGGAAAATACGTTCCTGAGCAGATTGACCCTGCTGTCATAT
CTTCAATTCCAACCCCTGCTTCATCAGCTGAAGCAACGTCATACCAACCA
ACCAATGACATCAGCCGTTACATCACAAACAGTGCTGCTAGTAACCAGTT
CCCCTCAAGCCAACAGGAAGGTGGACTGACGAGTAGTCTTAACGAAAGAG
ATTTCACAACGTTGACAGAGTCACTTCAAACCAGTCTCTCTTCACTACCT
ATTGTATCAGGGATCACTGAAAGTCATAAACTGGAACAAGAACAGAGAGA
TATCGCTAAAAGCATGACCAAGATACAGCAACATCAACCAATCCAAAAGT
TACTGCCTGGGCCATCGAGAAAACCATTACCCAAAAATTCATCTCAGCCT
GTGGTGATGCCTCGTTCAGCCAAGATGGTACATGATGTCGAAGAACAGTT
TGCTGGATTGGAATTCGGTTCTGGACCGGTCAGTCCTAGGCTACTAAAAG
TCGCTAATTCCTCGCCTGCTCCATATTCAAGTGACTTGAATAACACGGAA
AGTCTGGAGATTTCAGCGACAAGACAACCAATTGCCATTCTACAAGAACC
AACACCAATGATCACACCTTCTACCCCTCCAAAGTCGACAATAACACAAC
CAGACTTGGTTTCTCATCCCACAATTTTACCGAACGACACACCACCGACA
CCTACCATCCCTACGGAACCGGCAAACCCGTCACAACTTCCGCCAAGTGA
TCCTATTGACGTGACAAACTCAATTACAAGCTCTTTGAATGCTTTCCAAT
CACTGGAGAATAGCCAAAACGAGAGTAAATCGCACTATCTGGGATCACCT
GGAAGGGGAATAACTCATTCAATGGCTTCAGATGCTAATCAATATTCATC
AGCGTCTAAACTTCCTGCTTCTCCAACGTCAACCTCCTCTCTTGATGTTT
TCGCACGTCACAGTGGACTGGGAACCAGTGTCACCATGGCAATGGACCCA
AAACAAAAGCTATCTAGTTACCATGATTCACCAAAAGCCTATAGTTCAGT
GGAAAAGAACTCAGACAAGCTGTTATCTGAGAATAAACAATTCCTTGCTG
AACAACAGAGAGCGCTGGCAGCGCTGGCTGAGCAGCAGCGAGAACACGAT
GTAATTACTGAACAGAGGGCTGCATTTGCAGAACAGAAAGCCTTGGCTCA
ACAGAAATTACTGGCTAGTCAGAGGTCGAAAGATGACACTCGACCAGCTA
CAGACTCACTAAATAATAGCCTGAAAGAGACACGTCCTACTGATAACAGG
CTAGGAATCACGGAATCATCTCCTTTACAAGTCAAGGATTCACCTTCAAA
GAATTCCACCACCAGCGATGCTTCATCCTATACATCGAAAGGTCATCCTC
ATCGTTNC
Run BLAST on NCBI

transcript from alignment at scaffold_128:78483..93308+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047441 ID=TCONS_00047441|Name=TCONS_00047441|organism=Clytia hemisphaerica|type=transcript|length=14826bp|location=Sequence derived from alignment at scaffold_128:78483..93308+ (Clytia hemisphaerica)
ATTTTAGACATCAATGTACATATTGGTTGTAAATAGCCACGTGTATCATA
ATACTctttatatataaaaataaatatatcatGAAGAACAAGTCTGCAGA
GACAACACAAAATGTCCTTCAAAAACATTCACAGGTTTGTACTGTTAGTT
GACCTACGTATTGATAAATAATATCTCATAAAACACTTAgaaattctcaa
tttttctcAAGCTGTAGCAGATGAAGCAGAATAATGCATCATATTTGCTA
GTAAAAgtgttttcaaatttgaagtaatttttcaagTCTTTGTGCACGAA
AAATTGATATATTACATCAAAGTGTTACGTCACTTTAGATGGTGCAAGAA
TATACTTCAGCATGTGAAGtatgagaagctttgtccagtgTAACCAAAAA
TCGCAATATTTAGCAGCtcaggttttgtttttaaaattacaaATGTGTAA
AATCAGGTAAAATATATATTCTCATGTTAAGATAGGTCAGGAGCATTATT
AATAATCATTAGCTAAAAATTCTAATTAGTATTATTTATTACTTTCAAAA
TTAGGCAACAGAAGAACAACTCAGAGTTGCAAAACTTTCACAGATGACTA
AAGACTCTCATGAAGAAGAGATAAAAATGGTTTGTCTATAATGTTGTtca
aaaatttgtttgtttgtttgtttgtttgtctgtctGTCTATAATGTTGTT
TCGAAATTGAATTGAATGAGTGATAATGATAAAAAGCAACTTCAATTCAT
TTTATTGTTGTTCCTATTATTTTGATTTCGATTTATAATTaaatattatt
aatttttttcatttgaagcTTATCAACTGTTCTGTTCCCAAACTAAATGT
ATTGACTTTGAGTGAGTGGAACGAGGcaaaagatgtaaaaataaaGTAAA
GAATCCAATTAAAGTGTTCAGAAagatatctttaaaaaaagttttttatt
ttattctcattTATTCCGCAGGTTGCCGATATCACAAGGAAACCATTGGA
TATAGTCTCTTTGGCACTTCATGACAGTAATTATGATACATCTGTGgcaa
tccaaaatattttcgaaGGGAAATATGAAGCTGAGGTATGGACAATTTTG
ATTAATCCTTTAACACTTTTACTTTAACAGATCTTTTGGAACAATACATA
CAAGCAATGTATGTGGTGTATGATGTGTTATAAAATATtgtataaaatta
ttttggcATGAAATTGTATGAATGTGGCTTCCTAAATATCCAAATAAATT
CTAAATCATATTATGCTCTGTACATTATATTACGCTATAATTTATTTGAT
GGTAATTATGTTATATTTTTCTCAGGATGAATGGCaaacaaaaagtacaa
aacGGAACAAAAAGTCAGGGCCTGTTTTAAATAACACCACTGACTTTGGT
AACGATAAATTGGATGTCATTGATATAAAAGATAACGACCAAAAACCAaa
tgatataaaaaatatatctcGTGGAGGAGGAACTTCTGGTACAAAAGGTA
ATATTTTGAGCCTCATAAACTCACATAACACTTAcatattttattctttt
ttatgattttcacaAAGCAAGCATGCAgtgatttttaaatcattttttat
ctttttcaaaactttatatTGTTGTATATTTTCTATCCGTTCCCTACCAG
GACGTCCTTCATCTCATAACAGAAAAGATGATAGGTTCTCAGATGATAGA
CGAGATGGCTCTGAGGAGCGATCAACAGACTTTTCTCGTGATCGTATGAG
AGGTTCTGATCGTGGTGGACGTATGAGAGGGAGAGGCAGAGGAGGTGGTC
GAGGAGGTTTGTTCATTTATTGGCTCTAAGTTTAAAGTCAGCCTAGAATC
AACTAGAAACTCTTTTCAAGTTGTTTGAAAACCATTCtttttttggtttg
aaaattaaaatttgaaaaaaagtcttattttgaatatacttactttataa
atctttttcttttatttagcttcaagaGGTGGTCGCGGAGGATTTGGTAG
AGGTGGAGCCGCAAGAGGGTATGTCATGAATAGTCTTTTTTCTATTCAGa
tcatcaaattttgttatttaaagtTTGTTAAAAAGCTTCAGGGTACATGT
AGAAGGTGGCACTCCAAGAGAGATTGTGCCAGAACATACTACTTGTAGAG
TATGGTTTTTAAGATGTTTAGTTGCAAGGAGATGACTAAAATTAGAACAG
ATCATCCACGATGCTCtagacatgttttttaattgtttgttTGTGGCATC
TTCATAAAAGATAAATTTTGATTTGGGTAACTTGGaggtctgaaattttc
acaggatgttaGTAGTGATGATAGGAATTCTAGCTGTTGTAGGGGCCGGT
TAAGAGCAAATTTTAGCATTTGCGTGTGTTTCGGAAAATGATCTAAATCA
GAGCTAAAAACCCAGGAAGTTGTCTATCTGACCAATGATTCTCATAGAGG
GATTGTAATTAAAACAGTCTTAAAAGGCCCACATTTCTTTATTGTGGGGC
CCTTTATAGAGCACTTTTTTAGCACCTATTTTCCCATTGACAATAAGTGC
CAAAACGCCAAAGTAAAAGGCTTGATTGGGTATAAGACTTTCATAACTTC
TTTTGACATAGTTGAATAATCAAGCTATTAACACCAATATAACAAATGAG
CTGTTAAAGGACCcgtttggagctaaatttagcattttccaCCGAAAATA
CTGCAGCAGAATTACTaatctatatactaaaagtctaattttctatgagc
cgtggggtggccattatggatttttttccaagtctctttttgaatcgagc
tccgagcgggaaaacagtaGAGTGTCCTTTTTTCAAGGCGGAGTACGTTT
CTTTGGagacacggcaccggaaaatagcctacggttccttgccgatcggg
aaacgtcgcgcggttcggaagcgtatctccgttttcgaaattctacttta
ctggtaattttcgtaaaagtaaataaaacataGAATAGCAAGAAGCTCAT
TGATTGATCTGGTCTCTCTGCTCTGGTCACTGGTGCCATCGTTTGTACAT
GGATAGGGAATGGTCTAATGGTCATGGTATCCTGTTTCTTAANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctcgg
cgggtgcgacgccgggtgacggctagtctatattactaaaagtctaattc
tgaGTGAGCCGTGAGGGAGCCATTATGGacttttgagatgggggtttgag
agttacgtgaccgatttccGTTGgatgggtggttgaaaacgaaagcgaaa
gtggtcaggggaagagtgtgaaaattagcgtttttgaaaagaagtcgttg
cagtgtcaatcttttgCAAATTCAAagacccactttcccgtggaaataat
tgatgtttttttgttttttttgggactcttggggcataagctaccccgtt
gaccgcaaaaattccaaaattcgtggattgaccgttgacaacgtTAGGGG
TAAAGGAACCAAATGACGTATATGAGACTTTCAAAATTAAACATATTCAA
AATGAGGctttttgggtccgatgacgtcatcaaaaacagaaaaatacaat
atcttgaGTTTGAGAAGAATTTCagcaatggttgacccctcattggatcg
gaaatcattgAGAGAATCTTTTGGGTAAATGATTAATTCATTTCAGTGAA
GTGAACAATTTATTAcactttcgatgacgtcatttagggcccaaatgacg
tcacaaaacattaaatttgcaatatttttagttttcaaccaTTTAAAGTG
GAAGTTTTTCGTTGTTTGGGCTtacaaatcagatctttttattttactct
ccccaccatccaaagggcttatgatgcgttcagctttCTACTCCTCGGCA
GGTGCGAcaccgggtgacggctagtatgTTTCTAAACACCTAATTAAAAG
GCTAGAGTGCGTgtaaaaccttcataacttccTTTAAAGTAGTTTAATAA
TCAAGTTTTTAACACCAATATAACATTTGAGCTGTTAAAGGGCCcgtttg
gagctaaatttagcattttccaCTGGAAATACTGCAGCAGAAACCAAAAT
TAACTTTACACCTAGtctaatttttgctaaattcagcTCATTTTGAGACC
TAGGAACATAAAATAACCTCATGAAGTTCTGTTCAATAGTGTATCAAGCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTGGGTTATCAAATTTTAGC
ATAAAGACATGGCTTTCAAGAACTTTAAGTCCAATCAATGCTAAATTTTT
GCTCGTCAAAGGACCCTGGAATGCTTTATATCGGCCAAATTtggtttttc
tatctttttgaatGCCTCAAGCATACAAATATCAATATCAtagttctttt
gtgtttatctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNATTTTTAGTGATTGCTTATGTTGATATATTGA
TCCTACAAGGTATAAAAAGGCATGTGCAAAGTATTAGAGTCATATAGCAG
AAAAATTGAGAGAGATACAAGCCTCTAAATCCAAATGCTTATATATATCC
AAATTGGCTCATTTTTGGACTGCACTTTGTTTAAACATAAGTAATATGAC
AGATTTAAGCTttacaaaaaattcttttaaattttaaaagttcatcTTTT
CCACGCAATCATCATCAGGGCATAATTTCAGTTAATTCATTATATTAGAA
ACGAATGATGATTTCCCAAGACCCTgaaaacgaaacaattaaaaattatG
TCCCTCTCCTCTAAAGGGATGGGGCAAATCTTCAATACCATGTTTCAATT
TCTGAATCTAAAGtaaaagcaatttttaaaagTACATTATTCTTCTGACT
TATGGTAGAGAATTTATTGACATCTTGCCCTCAACActaattctatttgt
aaaaaagATTTAACTAAAGAGGATATTTTTAACTGAAATCTACctgcaac
aaagaaaaatagccaATACATTGCCATAATAATGAAAAATAGCCAGTAAT
TTGTCAGCGACAAAGCAAAAAGTTTTTCACGTCAGCCAGCAGTTGCATGG
CTAGTACAAAATTGCTCAAGTTTTGGTTATTGATTACCGACAATGCTTTC
TTTATTAAGGAGTGGAAGACCAGTCCGTGGTGCGGGAAGAGGTGGCAGAG
GAGGCAGACGTGGTGATGGCCGTAGAGAAGAAAATGGTTTTGGTGAACCA
TTGGGCGGTGGATTTGGTGCTCCATCAAGTGGATTTGGAGAACCAAGTTC
TGGAGGGTTTGGTGATCCTGCTGGAAGGTTTGGTCAACCTGTGAAAGAAG
GTAGGACTAGGAATTAGTCTTCACTACATATGACAAGATAGAGCGAAATT
TAAAGACaacattttttagattttggtATAGGTGgtaaaaatactaagaa
aaatgATGTGATGcaaaaaactattaaaatagGTTTAATCAAAGAATGAA
TTTTGATGTGCTGCCAGGCAGCCTTTGTCTACGTTTTGCCTTTTTATATG
ATTTTATCATATTATCACTTTTGAAAGTGCCTATTCGTTAAATTTTGTTA
ATTCTGGTTAATTTCTAATTTAGAAACTTGGGATGTTGACGAAAAGACAG
AAGGTTTGTGGCTAAGCAATTTACTTAAAGTAGAATTTCGAATAAAGTCA
AGAAATAAAATTACATAAATTGTTAGTTTCCCCTTTtaacgattttcaaa
aaatgtgaaaaaattcaactttaacTTGAAAATTCTCAATACAGTAGTCA
AAACAGATGGGATTTCCATTATATTGAGATGAAACCATAATAGTTATTAT
ATACCTCCTTGTTAGCAAGGTGTCTTTATGGAAAACGACTCATTAAACTA
AGCTCTTTCAATGATCTCTAACACCCATGAACCTGGGTAAATAACTGCGG
CTGTTGAACAGTTTATACTGATTAAAATAATAAGGCAAACAAAGGCAAAA
AAAGTTTTGCGAGAAAATTGCAAATTGACTacatattttaaaattggtCT
ATTTCCAGTTGATCAACCTCTTTCAGTTTCAGTGCCCAAATGGCAATTGG
TAAATAGCACATGGATTAGTCCCTATTCTCTGTATCCAGTCCAAATAGTG
TTAAGGGCCTATATACACAACTGCAAGACAGAATATTGGCAAGTCCATTA
AATCAGTCTAAGTATAGCTTAATATAATCATCAATTCAACTTCAGATTGG
GGATTGGAAGATACAACCACTTCAACGACGACTGCAAACACAGAAACCAA
ACTCGAAACAGACTGGTCAAAAGACTGGGGCGATGAAGAGGTACATTTCC
TATTTAATCTGTCCAGTTACGGAACTACTGGATGAatgacttttttaatt
acagGCTTGGAAGTTTGTGGTATCTCCTTTTATAATACAATTCAGTGAGG
CTAAAGTAAAAAGAATTTCTCTATACTCCTTTTAACATGATATTTTCCTT
GTTTTAGATGGAAGAGCTCGAAACGACAAATGAGAAAGTAGACAGTTTAT
TCTCACACAAGTTAGACTGGGGCCACGTCAATGGGAAAACCGAAGAGAAT
TCATGGGCGGATAAAGAACAACCTTCAAATACGTTGCCTGCAATGGATTC
TGGAAAATACGTTCCTGAGCAGTAAGTTTTCATTAGAACTTTCCAATTAG
CCAACTACCTGAAGTGGATTAGTTTTGGCAATTggcaaaaatgaaatttt
tggagCATTCTTAAAAAGATTtcgttaaatttggcggggatttgatttgg
cgaattgccgatttttgaaattttggcagggatttaatttatgaatttta
tcaaaaatcgccaaattaaatccctgccaaaatttatccacttgaAGGTA
CTATTTAAATAACGGGTAAACGACATAACTGCACAGAACTGCAATTACTA
AAACACAAATTGTTTTTACCCAATCTTCCTACTTTGAAATATAATTCTGA
TTTTTTCATCAATAGCTGGATGATATTAATGAGTGTGTTTTACAAAATTA
TGATAAGATTTATAAAACGAAAAATTATGAAGAATTTCTGACTTTCTTTC
TAATTATCTATACATGTATTGGCGGTAGTGGTATCTTCATTACTCGTCGT
ActcagaaaaatatatatttcacCTTTATTTAGGATTGACCCTGCTGTCA
TATCTTCAATTCCAACCCCTGCTTCATCAGCTGAAGCAACGTCATACCAA
CCAACCAATGACATCAGCCGTTACATCACAAACAGTGCTGCTAGTAACCA
GTTCCCCTCAAGCCAACAGGAAGGTGGACTGACGAGTAGTCTTAACGAAA
GAGATTTCACAACGTTGACAGAGTCACTTCAAACCAGTCTCTCTTCACTA
CCTATTGTATCAGGGATCACTGAAAGTCATAAACTGGAACAAGAACAGAG
AGATATCGCTAAAAGCATGACCAAGATACAGCAACATCAACCAATCCAAA
AGTTACTGCCTGGGCCATCGAGAAAACCATTACCCAAAAATTCATCTCAG
CCTGTGGTGATGCCTCGTTCAGCCAAGATGGTACATGATGTCGAAGAACA
GTTTGCTGGATTGGAATTCGGTTCTGGACCGGTCAGTCCTAGGCTACTAA
AAGTCGCTAATTCCTCGCCTGCTCCATATTCAAGGTGATTAAGCTCAGAT
ATCTTACATAAAACACTTGATGGGACTTCTACATCTCCCTGCTGAAgcaa
ttctattgaataaagaTATTTACTCTAACCGTCCCTCTTTCATCCATGCT
TTCTGTTTGTATTGAACACGGCAACAAACTGGTCTTTTTATGAAGATGCC
GTATTATGTTGCCTCAACACCGAAGGGTTTGAGAGGAATCTTCCACTTCT
CAAACAAGAAAAGAAGAAGTGCTTTTggaatgacagattgaatctaacGC
TCTCTTTATTTTCATGCGGcttacttttcaaaatttaacaacagatttta
ctttcaatctagcgtttgtgtgaaaaccacttGGTTCAGGCGTTTTGGAA
NTAAAACGAAAAATTATGAAGAATTTCTGACTTTCTTTCTAATTATCTAT
ACATGTATTGGCGGTAGTGGTATCTTCATTACTCGTCGTActcagaaaaa
tatatatttcacCTTTATTTAGGATTGACCCTGCTGTCATATCTTCAATT
CCAACCCCTGCTTCATCAGCTGAAGCAACGTCATACCAACCAACCAATGA
CATCAGCCGTTACATCACAAACAGTGCTGCTAGTAACCAGTTCCCCTCAA
GCCAACAGGAAGGTGGACTGACGAGTAGTCTTAACGAAAGAGATTTCACA
ACGTTGACAGAGTCACTTCAAACCAGTCTCTCTTCACTACCTATTGTATC
AGGGATCACTGAAAGTCATAAACTGGAACAAGAACAGAGAGATATCGCTA
AAAGCATGACCAAGATACAGCAACATCAACCAATCCAAAAGTTACTGCCT
GGGCCATCGAGAAAACCATTACCCAAAAATTCATCTCAGCCTGTGGTGAT
GCCTCGTTCAGCCAAGATGGTACATGATGTCGAAGAACAGTTTGCTGGAT
TGGAATTCGGTTCTGGACCGGTCAGTCCTAGGCTACTAAAAGTCGCTAAT
TCCTCGCCTGCTCCATATTCAAGGTGATTAAGCTCAGATATCTTACATAA
AACACTTGATGGGACTTCTACATCTCCCTGCTGAAGCAATTCTATTTACT
CTAACCGCCCCTCTTTCATCCATGCTTTCTGTTTGTATTGAACACGGCAA
CAAACTGGTCTTTTTATGAAGATGCCGTATTATGTTGCCTCAACACCGAA
GGGTTAGAGAGGAATCTTCCACTTCTCAAACAAGAAAAGAAGAAGTGCTT
TTggaatgacagattgaatcgaactctttgttttcatgcggcttactttt
caaaatttaacaacagattttactttcaatctagcgtttgtgtgaaaacc
acttGGTTCAGGCGTTTTGGAACGGAAGGGAaaaaagtggcttcatttcc
catccaagagtttcaaCTCTAGCTCCTTCTGGGAAGGAACTCCATTAAAC
TGAACTCAATGAtctttgtgtttgtttttatttgaaatcagattagtaat
aaaatattttattcgtTCAATTCAGTGACTTGAATAACACGGAAAGTCTG
GAGATTTCAGCGACAAGACAACCAATTGCCATTCTACAAGAACCAACACC
AATGATCACACCTTCTACCCCTCCAAAGTCGACAATAACACAACCAGACT
TGGTTTCTCATCCCACAATTTTACCGAACGACACACCACCGACACCTACC
ATCCCTACGGAACCGGCAAACCCGTCACAACTTCCGCCAAGTGATCCTAT
TGACGTGACAAACTCAATTACAAGCTCTTTGAATGCTTTCCAATCACTGG
AGAATAGCCAAAACGAGAGTAAATCGCACTATCTGGGATCACCTGGAAGG
GGAATAACTCATTCAATGGTGTGTTTTTCATAATAGATTCTATAGATGAA
TTTTTATCTATACTATCGATGTCAAAGTataatttgacaatttttgggta
tttcaaaataaataacattACGAACAAAGTTTCGAANTTATGCTATCGAT
GTCAAAGTataatttgacaatttttgggtatttcaaaataaatagcaTTA
TGAACAAAGTTTCGAATTTGAGAGAGTCGATATGGATATTCTGCTTTCAA
GATAAAGCCAGCTATCGTACCGTGTTCCTTATCTTTATATTTAGGTCATC
TACGATCACCAATCTTAAATAGTATAATACTACTTTTATACTTAATTTAC
TTAAGGCTCAGATGCATCGAAaacaaatatttcccgtttCTAATTTCACC
TTTAACATTTCTTCGTTCGCTCTAGGCTTCAGATGCTAATCAATATTCAT
CAGCGTCTAAACTTCCTGCTTCTCCAACGTCAACCTCCTCTCTTGATGTT
TTCGCACGTCACAGTGGACTGGGAACCAGTGTCACCATGGCAATGGACCC
AAAACAAAAGCTATCTAGTTACCATGATTCACCAAAAGCCTATAGTTCAG
TGGAAAAGAACTCAGACAAGCTGTTATCTGAGAATAAACAATTCCTTGCT
GAACAACAGAGAGCGCTGGCAGCGCTGGCTGAGCAGCAGCGAGAACACGA
TGTAATTACTGAACAGAGGGCTGCATTTGCAGAACAGAAAGCCTTGGCTC
AACAGAAATTACTGGCTAGTCAGAGGTCGAAAGATGACACTCGACCAGCT
ACAGACTCACTAAATAATAGCCTGAAAGAGACACGTCCTACTGATAACAG
GCTAGGAATCACGGAATCATCTCCTTTACAAGTCAAGGTAATATATCAAA
TATTCTTACATTCGTACAAAACTTATTTCATCATATTTCAACTTTCACTC
ATTGCTCAGAGATTTTTCTGAGCTCTTTTTATTTCCGTATCGGCCAAAAT
ACTCAGTCCAAGATTGagcattttgattattttctacGTATTTAAAATCT
TTCGGGAGCTTCGCCTTCTAAACTACCACCAGGACTATGCCCTGGACCCA
ATGGTGACCCTGAGCTTTATCAATGCACAGCTTCGTTGAGCAGATGTTCT
TACAGGCATATTAGAAACTCAAcctaaattgacaaaaattgccCCACTTC
ATAGTGCTTAAAAAATCCCTTTCTTTTGCtcacttttttacgagtttatg
taggtgtgtttttcagcgacggtgACGGTAAGATTCAAATTTGACTAGCC
GAAGACGACGGTAGATCAGCACTACTATCCTCGATTTTGCAAGTCAAAAC
GGAAAACTGtcattccaaatcgcttcagtcactctaccatCCTCataagt
gcaaatacataacgTCGCTTTTAACGAATGTCTCTGGAGCACTCTCTTAN
TCTAGTTACCATGATTCACCAAAAGCCTATAGTTCAGTGGAAAAGAACTC
AGACAAGCTGTTATCTGAGAATAAACAATTCCTTGCTGAACAACAGAGAG
CGCTGGCAGCGCTGGCTGAGCAGCAGCGAGAACACGATGTAATTACTGAA
CAGAGGGCTGCATTTGCAGAACAGAAAGCCTTGGCTCAACAGAAATTACT
GGCTAGTCAGAGGTCGAAAGATGACACTCGACCAGCTACAGACTCACTAA
ATAATAGCCTGAAAGAGACACGTCCTACTGATAACAGGCTAGGAATCACG
GAATCATCTCCTTTACAAGTCAAGGTAATATATCAAATATTCTTACATTC
GTACAAAACTTATTTCATCATATTTCAACTTTCACTCCTTGCTCAGAGAT
TTTTCTGAGCTCTTTTTATTTCCGTATCGGCCAAAATACTCAGTCCAAGA
TTGagcattttgattattttctacGTATTTAAAATCTTTCGGGAGCTTCG
CCATCTAAACTACCACCAGGACTTTGCCCTGGACCCAATGGGGACCCTGA
GCTTTATCAATGCACAGCTTCGTAGAGCAGATGTTCTTACAGGCATATTA
GAAACTCAACCTTAATTGACAAAAACTGCCCCACTTCATAGtgcttaaaa
aaatctctttccTTTGCTCACTTTCTTACGAGTTTATGTaggtgtgtttt
tcagcgacggtgACGGTAAGATTCTCATTTGACTAGCCGAGGACGACGGT
AGATCAGCACTATTACCATCCTCGATTTTGCAAGTCAAAACGGAAAACTG
tcattccaaatcgcttcagtcactctaccatCCTCataagtgcaaataca
taaattcGCTTTTAACGAATGTCTCTGGAGCACTCTCTTAATGTTGTAGA
ATATCAAATTGAAGTCCTTTCGCTTTAAGTGGGCACTCTCTTTGCAACCG
TGTTGAAACGATATTGTAATTAGTCTGTCTGTTAGTATCATACACGTCAT
TTATTGAATAAAGAGAGGCTTCGAAGTAAATTGGTCCAGCAAAATGCTTA
TTgtttgcttttgaaaaaattgatcaCGTTTTTCCTTTCTATCGACTTTA
ACAGGATTCACCTTCAAAGAATTCCACCACCAGCGATGCTTCATCCTATA
CATCGAAAGGTCATCCTCATCGTTNC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030211XLOC_030211Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047441-exon-scaffold_128-1491911889:78483..78616TCONS_00047441-exon-scaffold_128-1491911889:78483..78616Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1510915933:78483..78616TCONS_00047441-exon-scaffold_128-1510915933:78483..78616Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1575043694:78483..78616TCONS_00047441-exon-scaffold_128-1575043694:78483..78616Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1491911889:79037..79111TCONS_00047441-exon-scaffold_128-1491911889:79037..79111Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1510915933:79037..79111TCONS_00047441-exon-scaffold_128-1510915933:79037..79111Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1575043694:79037..79111TCONS_00047441-exon-scaffold_128-1575043694:79037..79111Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1491911889:79454..79567TCONS_00047441-exon-scaffold_128-1491911889:79454..79567Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1510915933:79454..79567TCONS_00047441-exon-scaffold_128-1510915933:79454..79567Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1575043694:79454..79567TCONS_00047441-exon-scaffold_128-1575043694:79454..79567Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1491911889:79808..79979TCONS_00047441-exon-scaffold_128-1491911889:79808..79979Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1510915933:79808..79979TCONS_00047441-exon-scaffold_128-1510915933:79808..79979Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1575043694:79808..79979TCONS_00047441-exon-scaffold_128-1575043694:79808..79979Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1491911889:80133..80288TCONS_00047441-exon-scaffold_128-1491911889:80133..80288Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1510915933:80133..80288TCONS_00047441-exon-scaffold_128-1510915933:80133..80288Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1575043694:80133..80288TCONS_00047441-exon-scaffold_128-1575043694:80133..80288Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1491911889:80452..80500TCONS_00047441-exon-scaffold_128-1491911889:80452..80500Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1510915933:80452..80500TCONS_00047441-exon-scaffold_128-1510915933:80452..80500Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1575043694:80452..80500TCONS_00047441-exon-scaffold_128-1575043694:80452..80500Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1491911889:86342..86532TCONS_00047441-exon-scaffold_128-1491911889:86342..86532Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1510915933:86342..86532TCONS_00047441-exon-scaffold_128-1510915933:86342..86532Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1575043694:86342..86532TCONS_00047441-exon-scaffold_128-1575043694:86342..86532Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1491911889:86806..86835TCONS_00047441-exon-scaffold_128-1491911889:86806..86835Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1510915933:86806..86835TCONS_00047441-exon-scaffold_128-1510915933:86806..86835Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1575043694:86806..86835TCONS_00047441-exon-scaffold_128-1575043694:86806..86835Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1491911889:87428..87522TCONS_00047441-exon-scaffold_128-1491911889:87428..87522Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1510915933:87428..87522TCONS_00047441-exon-scaffold_128-1510915933:87428..87522Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1575043694:87428..87522TCONS_00047441-exon-scaffold_128-1575043694:87428..87522Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1491911889:87690..87853TCONS_00047441-exon-scaffold_128-1491911889:87690..87853Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1510915933:87690..87853TCONS_00047441-exon-scaffold_128-1510915933:87690..87853Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1575043694:87690..87853TCONS_00047441-exon-scaffold_128-1575043694:87690..87853Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1491911889:88366..88866TCONS_00047441-exon-scaffold_128-1491911889:88366..88866Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1510915933:88366..88866TCONS_00047441-exon-scaffold_128-1510915933:88366..88866Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1575043694:88366..88866TCONS_00047441-exon-scaffold_128-1575043694:88366..88866Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1491911889:90358..90700TCONS_00047441-exon-scaffold_128-1491911889:90358..90700Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1510915933:90358..90700TCONS_00047441-exon-scaffold_128-1510915933:90358..90700Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1575043694:90358..90700TCONS_00047441-exon-scaffold_128-1575043694:90358..90700Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1491911889:91108..91532TCONS_00047441-exon-scaffold_128-1491911889:91108..91532Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1510915933:91108..91532TCONS_00047441-exon-scaffold_128-1510915933:91108..91532Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1575043694:91108..91532TCONS_00047441-exon-scaffold_128-1575043694:91108..91532Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1491911889:92420..92456TCONS_00047441-exon-scaffold_128-1491911889:92420..92456Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1510915933:92420..92456TCONS_00047441-exon-scaffold_128-1510915933:92420..92456Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1575043694:92420..92456TCONS_00047441-exon-scaffold_128-1575043694:92420..92456Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1491911889:93237..93308TCONS_00047441-exon-scaffold_128-1491911889:93237..93308Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1510915933:93237..93308TCONS_00047441-exon-scaffold_128-1510915933:93237..93308Clytia hemisphaericaexon
TCONS_00047441-exon-scaffold_128-1575043694:93237..93308TCONS_00047441-exon-scaffold_128-1575043694:93237..93308Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_128supercontigscaffold_128:78483..93308 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0272755	0.0381038	0.00128705	0.109376	0	0	0	0	1.53926e-08	4.12733e-05	0.00594225	2.04513e-07	1.05611e-05	1.07642e-07	1.93301e-07	3.51882e-08	1.36082e-09	1.20495e-06	1.34812e-05	5.03796e-08	0.00180369	0.0116691	0.000983396	0.00527401	0	0	0.000464421	0.00711951	4.75022e-05	0.0125981
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047441 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top