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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047415 ID=TCONS_00047415|Name=TCONS_00047415|organism=Clytia hemisphaerica|type=transcript|length=1244bp
AGAACAATCCTATTCCTAAAAATTTTTTGTGCAAGGCGCCAAAAATGGAC
GAACACTTTAGAGAATTAATGGAGGAACGACGTCGAAGGGGAGAGATAGA
GCTTGACCACGTTTTTGAGAGTGTTCAGAGTCGGATCTTGCAAGTAATGG
GTCCATTGGCAAAGGTTTGGTTTATCTTGGAAGAAGTTTTTCAAACCAAG
TCCTTTGAAGAAGTGGACATGGCAGAACTCCTGGATTACATTGACAGTac
ttgagtaatcagaaaagctgtttttccatctctttacattcctctgcttA
TATTGAGCTTGAAAAAGCGAACGAGCAGATCGAGTTTTTATCTAAGGAAA
CTCAgcaatataaaaataaatgtttttggCTGGCATTGCCGCAAACGCCA
AAGAACAACAACTTATAGAAtaccaaaaagaaaatgttGCATTGCATATC
AAATTGGCAAAGCAAAAGTAAgtcattcaaatttttcgttCTTAGAAGTA
ActggaagaaaaaatgaaatgggGTTTTTCTGAAAAGGTGTGATTAATTT
GTCCATCGTTTTTTcgttgtacacgttttttttttattagaacacctaaa
atttggctgagcctggatgtgcttatttttttagcaattttcagcctgaa
atgttcttagatgcgttcttaaattttcagactactctaaatcgacaata
tcatgcaaaataaagagcacttaaaattggtaaaatttggacaatttttg
actctcgatttagaaaatccattcctaagtttgtttaaaactgcttggaa
aagaggaaaaaattgtagtttcttgtaatttttttccaaactgaggctgg
gcatgttcttacgatgttcttaatttttcgacgaatttcagcctcaatgt
tcttataaactgggttctaataaaagaaaaaacgtgtactcaaaAAGCGT
GTTTTTGTCTTTATGCAAAGttcttttttcctaatttttactCTAGCTTC
TAGTTCAGTtacgtttttttaatattttgtttgttttatttttgttttat
tttaatgtaaagACGTCAAAACCCTCTCAACCGTAAGCCCTATATTGCTT
TATTTTAACTAATTTTGAAGAAATCCAAAAAGAGCCGGAGAAAAGGAATC
TTATTATAAAACTTCATTTAAATACTTTTTGGGAATGCTAATTGATTTTA
ACATTTGAATTATTTCGACTATTGGACACACTTTCCAGTCTAAA Run BLAST on NCBI transcript from alignment at scaffold_127:16633..17876 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047415 ID=TCONS_00047415|Name=TCONS_00047415|organism=Clytia hemisphaerica|type=transcript|length=1244bp|location=Sequence derived from alignment at scaffold_127:16633..17876 (Clytia hemisphaerica)
TTTAGACTGGAAAGTGTGTCCAATAGTCGAAATAATTCAAATGTTAAAAT
CAATTAGCATTCCCAAAAAGTATTTAAATGAAGTTTTATAATAAGATTCC
TTTTCTCCGGCTCTTTTTGGATTTCTTCAAAATTAGTTAAAATAAAGCAA
TATAGGGCTTACGGTTGAGAGGGTTTTGACGTctttacattaaaataaaa
caaaaataaaacaaacaaaatattaaaaaaacgtaACTGAACTAGAAGCT
AGagtaaaaattaggaaaaaagaaCTTTGCATAAAGACAAAAACACGCTT
tttgagtacacgttttttcttttattagaacccagtttataagaacattg
aggctgaaattcgtcgaaaaattaagaacatcgtaagaacatgcccagcc
tcagtttggaaaaaaattacaagaaactacaattttttcctcttttccaa
gcagttttaaacaaacttaggaatggattttctaaatcgagagtcaaaaa
ttgtccaaattttaccaattttaagtgctctttattttgcatgatattgt
cgatttagagtagtctgaaaatttaagaacgcatctaagaacatttcagg
ctgaaaattgctaaaaaaataagcacatccaggctcagccaaattttagg
tgttctaataaaaaaaaaacgtgtacaacgAAAAAACGATGGACAAATTA
ATCACACCTTTTCAGAAAAACcccatttcattttttcttccagTTACTTC
TAAGaacgaaaaatttgaatgacTTACTTTTGCTTTGCCAATTTGATATG
CAATGCaacattttctttttggtaTTCTATAAGTTGTTGTTCTTTGGCGT
TTGCGGCAATGCCAGccaaaaacatttatttttatattgcTGAGTTTCCT
TAGATAAAAACTCGATCTGCTCGTTCGCTTTTTCAAGCTCAATATaagca
gaggaatgtaaagagatggaaaaacagcttttctgattactcaagtACTG
TCAATGTAATCCAGGAGTTCTGCCATGTCCACTTCTTCAAAGGACTTGGT
TTGAAAAACTTCTTCCAAGATAAACCAAACCTTTGCCAATGGACCCATTA
CTTGCAAGATCCGACTCTGAACACTCTCAAAAACGTGGTCAAGCTCTATC
TCTCCCCTTCGACGTCGTTCCTCCATTAATTCTCTAAAGTGTTCGTCCAT
TTTTGGCGCCTTGCACAAAAAATTTTTAGGAATAGGATTGTTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047415-exon-scaffold_127-1491911889:16633..17876 | TCONS_00047415-exon-scaffold_127-1491911889:16633..17876 | Clytia hemisphaerica | exon |
| TCONS_00047415-exon-scaffold_127-1510915933:16633..17876 | TCONS_00047415-exon-scaffold_127-1510915933:16633..17876 | Clytia hemisphaerica | exon |
| TCONS_00047415-exon-scaffold_127-1575043694:16633..17876 | TCONS_00047415-exon-scaffold_127-1575043694:16633..17876 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_127 | supercontig | scaffold_127:16633..17876 . |
Blast
The following BLAST results are available for this feature:
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