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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047368 ID=TCONS_00047368|Name=TCONS_00047368|organism=Clytia hemisphaerica|type=transcript|length=1910bp
ATTTTTATTTCGTTAGTTAAGTTTTATTTGATAGTACCACGCagtcaaaa
atatttacttGTAGTTTCTACTCTTATCTTCTATCACGTTGGTGTGAAGC
TCTATAGTTTGgtgttcattttttaaatgttacGTTTAGATAACCGTAAT
ATGTCACGTTTTGAAAAGCCTGTATATAAACTTTCTGCTTTTTAACGGAA
ACGACGATAATTTGATTCTCGTTTTTAGTGTATTATAATTCAGCATTACT
CTAAATATATAACTTTGAAAAAAACACGTCACCACGCCGCTATCGATTTC
GGCTCAATTCTGAAATGTTTGTCTTGTTGGAATTCGTATTTTTACTCATC
TTATGGACCATTCTCGTCCCTATCCTTGTCGCTTCATTACCTGTCATCAT
AGCTTTATATTTGCTCCGAAAGATAGAAGCGATTGCACGCTCACGTACAT
CGAGCGCACTACCTATTCGACGGGAAGATGTTTTATGGCTTATGCCGACA
ACCGAAAATCAACAAATTATTTCCGGTGTTTTAGAAGTTGACGGATACCT
TCCTTTAGATGATTTCCGTAAAACGGTACTTGAGAGACTTGTTAATAAAA
CAGATGCCAAAGGCAGAAATAAAATTTATCCTGAAGTTTCAATGCATATC
GAGCcgggtttatttgattattattgGCAACCCGATTTGGAATTCAATAT
TTCTGAACATGTTTCCCGATATGAAGGTAACCCGATTTCTAATTCCGATC
ACTTACGTCAGATAATCGGTTTACACGTATCGAAACCTTTCGCGAATAAA
AAGAAATCGCCTTGGGAATTTATGTTAATTCCGCATGTCAATGAATTCGG
AAACCAGAAAACGGTTTTATTATTCCGACTATCGCACGCCATATCAGATG
GTTCGTCATTAGCGTATTTCTTGATAAACGTACTGGCTGACAGCCCACCA
AACCAAGGTGTGATTGTGAAGAAAACTTTCACACAAACGCAAAAGGTTTT
ATTCTACATGAAAGGTCTGTGGTACCTTCCTATGGTATATATCAAAATAT
TTGTTCATTCGAACGACAATAATCAGATTCACCGATCTAAATTATCGACC
GAAAAAAAAGTATATTGGACCAAACCATTACCTTTACAGCTTCTTAAAAC
GGTTAAAACTGATTTAAAGTCTACTATAAATGACATCCTTGTCGGTTGTT
TTGCTAAAGCTTTAAACGATCACCTGAATAGAGATCAAAATGACCTGAAA
ACAGACACTGTTTCGGCCGTATTTGCAGTCGATACACGATCAAACGTCGA
GCAGGCGAAGATATTTCGGAATCACGTAGCAGGTGTCATTGCTCCATTGC
CAAACTCAGGAGCAAGCACCCACGATTACATTTCGAAATCGAAGCGCTGT
TTTGACCAAATTAAACAGGTTGGAGCGCCGATTAGTTTATATTTTGGTTG
GCGATTTATGTCATTTCTTTTGCCGGTCGCTCTGCTCAAATTCTTTGTAC
ACCACATGGTCAATAAAACAACTTTGTGTATCTCTAATCTGATTGGTCCA
CAGTATTCAATCACGTTGTGTAATCTACCAATCGAATGTGTCAATTTCTG
GCCGCCCCCGACTGGAAACGAGGCTATGGGTGTTTCATTTTGTAGCTATG
ATGAATGTATAAGAATGGGCGTTTTAGCTGATTCGAACGCCCTTGACGAT
GGTGATGAATTAATTTCATTATTTGAGGAAAATGTTTCGGCTTTGGAGGA
GTCTGTTAcagtttgattttttctttttttatattttcatagcTGTAAAT
CATAACCAGTATTTTTGTaatgatttttaatattttatccaACATACTTT
TATAATTACGGCTAATAAAAGACGGTCGGTAGCGCAATGAAAATTGTTAC
TATGGGACAG Run BLAST on NCBI protein sequence of TCONS_00047368-protein >TCONS_00047368-protein ID=TCONS_00047368-protein|Name=TCONS_00047368-protein|organism=Clytia hemisphaerica|type=polypeptide|length=483bp
MFVLLEFVFLLILWTILVPILVASLPVIIALYLLRKIEAIARSRTSSALP
IRREDVLWLMPTTENQQIISGVLEVDGYLPLDDFRKTVLERLVNKTDAKG
RNKIYPEVSMHIEPGLFDYYWQPDLEFNISEHVSRYEGNPISNSDHLRQI
IGLHVSKPFANKKKSPWEFMLIPHVNEFGNQKTVLLFRLSHAISDGSSLA
YFLINVLADSPPNQGVIVKKTFTQTQKVLFYMKGLWYLPMVYIKIFVHSN
DNNQIHRSKLSTEKKVYWTKPLPLQLLKTVKTDLKSTINDILVGCFAKAL
NDHLNRDQNDLKTDTVSAVFAVDTRSNVEQAKIFRNHVAGVIAPLPNSGA
STHDYISKSKRCFDQIKQVGAPISLYFGWRFMSFLLPVALLKFFVHHMVN
KTTLCISNLIGPQYSITLCNLPIECVNFWPPPTGNEAMGVSFCSYDECIR
MGVLADSNALDDGDELISLFEENVSALEESVTV Run BLAST on NCBI transcript from alignment at scaffold_126:190350..192259 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047368 ID=TCONS_00047368|Name=TCONS_00047368|organism=Clytia hemisphaerica|type=transcript|length=1910bp|location=Sequence derived from alignment at scaffold_126:190350..192259 (Clytia hemisphaerica)
CTGTCCCATAGTAACAATTTTCATTGCGCTACCGACCGTCTTTTATTAGC
CGTAATTATAAAAGTATGTtggataaaatattaaaaatcattACAAAAAT
ACTGGTTATGATTTACAgctatgaaaatataaaaaaagaaaaaatcaaac
tgTAACAGACTCCTCCAAAGCCGAAACATTTTCCTCAAATAATGAAATTA
ATTCATCACCATCGTCAAGGGCGTTCGAATCAGCTAAAACGCCCATTCTT
ATACATTCATCATAGCTACAAAATGAAACACCCATAGCCTCGTTTCCAGT
CGGGGGCGGCCAGAAATTGACACATTCGATTGGTAGATTACACAACGTGA
TTGAATACTGTGGACCAATCAGATTAGAGATACACAAAGTTGTTTTATTG
ACCATGTGGTGTACAAAGAATTTGAGCAGAGCGACCGGCAAAAGAAATGA
CATAAATCGCCAACCAAAATATAAACTAATCGGCGCTCCAACCTGTTTAA
TTTGGTCAAAACAGCGCTTCGATTTCGAAATGTAATCGTGGGTGCTTGCT
CCTGAGTTTGGCAATGGAGCAATGACACCTGCTACGTGATTCCGAAATAT
CTTCGCCTGCTCGACGTTTGATCGTGTATCGACTGCAAATACGGCCGAAA
CAGTGTCTGTTTTCAGGTCATTTTGATCTCTATTCAGGTGATCGTTTAAA
GCTTTAGCAAAACAACCGACAAGGATGTCATTTATAGTAGACTTTAAATC
AGTTTTAACCGTTTTAAGAAGCTGTAAAGGTAATGGTTTGGTCCAATATA
CTTTTTTTTCGGTCGATAATTTAGATCGGTGAATCTGATTATTGTCGTTC
GAATGAACAAATATTTTGATATATACCATAGGAAGGTACCACAGACCTTT
CATGTAGAATAAAACCTTTTGCGTTTGTGTGAAAGTTTTCTTCACAATCA
CACCTTGGTTTGGTGGGCTGTCAGCCAGTACGTTTATCAAGAAATACGCT
AATGACGAACCATCTGATATGGCGTGCGATAGTCGGAATAATAAAACCGT
TTTCTGGTTTCCGAATTCATTGACATGCGGAATTAACATAAATTCCCAAG
GCGATTTCTTTTTATTCGCGAAAGGTTTCGATACGTGTAAACCGATTATC
TGACGTAAGTGATCGGAATTAGAAATCGGGTTACCTTCATATCGGGAAAC
ATGTTCAGAAATATTGAATTCCAAATCGGGTTGCcaataataatcaaata
aacccgGCTCGATATGCATTGAAACTTCAGGATAAATTTTATTTCTGCCT
TTGGCATCTGTTTTATTAACAAGTCTCTCAAGTACCGTTTTACGGAAATC
ATCTAAAGGAAGGTATCCGTCAACTTCTAAAACACCGGAAATAATTTGTT
GATTTTCGGTTGTCGGCATAAGCCATAAAACATCTTCCCGTCGAATAGGT
AGTGCGCTCGATGTACGTGAGCGTGCAATCGCTTCTATCTTTCGGAGCAA
ATATAAAGCTATGATGACAGGTAATGAAGCGACAAGGATAGGGACGAGAA
TGGTCCATAAGATGAGTAAAAATACGAATTCCAACAAGACAAACATTTCA
GAATTGAGCCGAAATCGATAGCGGCGTGGTGACGTGTTTTTTTCAAAGTT
ATATATTTAGAGTAATGCTGAATTATAATACACTAAAAACGAGAATCAAA
TTATCGTCGTTTCCGTTAAAAAGCAGAAAGTTTATATACAGGCTTTTCAA
AACGTGACATATTACGGTTATCTAAACgtaacatttaaaaaatgaacacC
AAACTATAGAGCTTCACACCAACGTGATAGAAGATAAGAGTAGAAACTAC
aagtaaatatttttgactGCGTGGTACTATCAAATAAAACTTAACTAACG
AAATAAAAAT Coding sequence (CDS) from alignment at scaffold_126:190350..192259 >TCONS_00047368 ID=TCONS_00047368|Name=TCONS_00047368|organism=Clytia hemisphaerica|type=CDS|length=1452bp|location=Sequence derived from alignment at scaffold_126:190350..192259 (Clytia hemisphaerica)
tcaaactgTAACAGACTCCTCCAAAGCCGAAACATTTTCCTCAAATAATG
AAATTAATTCATCACCATCGTCAAGGGCGTTCGAATCAGCTAAAACGCCC
ATTCTTATACATTCATCATAGCTACAAAATGAAACACCCATAGCCTCGTT
TCCAGTCGGGGGCGGCCAGAAATTGACACATTCGATTGGTAGATTACACA
ACGTGATTGAATACTGTGGACCAATCAGATTAGAGATACACAAAGTTGTT
TTATTGACCATGTGGTGTACAAAGAATTTGAGCAGAGCGACCGGCAAAAG
AAATGACATAAATCGCCAACCAAAATATAAACTAATCGGCGCTCCAACCT
GTTTAATTTGGTCAAAACAGCGCTTCGATTTCGAAATGTAATCGTGGGTG
CTTGCTCCTGAGTTTGGCAATGGAGCAATGACACCTGCTACGTGATTCCG
AAATATCTTCGCCTGCTCGACGTTTGATCGTGTATCGACTGCAAATACGG
CCGAAACAGTGTCTGTTTTCAGGTCATTTTGATCTCTATTCAGGTGATCG
TTTAAAGCTTTAGCAAAACAACCGACAAGGATGTCATTTATAGTAGACTT
TAAATCAGTTTTAACCGTTTTAAGAAGCTGTAAAGGTAATGGTTTGGTCC
AATATACTTTTTTTTCGGTCGATAATTTAGATCGGTGAATCTGATTATTG
TCGTTCGAATGAACAAATATTTTGATATATACCATAGGAAGGTACCACAG
ACCTTTCATGTAGAATAAAACCTTTTGCGTTTGTGTGAAAGTTTTCTTCA
CAATCACACCTTGGTTTGGTGGGCTGTCAGCCAGTACGTTTATCAAGAAA
TACGCTAATGACGAACCATCTGATATGGCGTGCGATAGTCGGAATAATAA
AACCGTTTTCTGGTTTCCGAATTCATTGACATGCGGAATTAACATAAATT
CCCAAGGCGATTTCTTTTTATTCGCGAAAGGTTTCGATACGTGTAAACCG
ATTATCTGACGTAAGTGATCGGAATTAGAAATCGGGTTACCTTCATATCG
GGAAACATGTTCAGAAATATTGAATTCCAAATCGGGTTGCcaataataat
caaataaacccgGCTCGATATGCATTGAAACTTCAGGATAAATTTTATTT
CTGCCTTTGGCATCTGTTTTATTAACAAGTCTCTCAAGTACCGTTTTACG
GAAATCATCTAAAGGAAGGTATCCGTCAACTTCTAAAACACCGGAAATAA
TTTGTTGATTTTCGGTTGTCGGCATAAGCCATAAAACATCTTCCCGTCGA
ATAGGTAGTGCGCTCGATGTACGTGAGCGTGCAATCGCTTCTATCTTTCG
GAGCAAATATAAAGCTATGATGACAGGTAATGAAGCGACAAGGATAGGGA
CGAGAATGGTCCATAAGATGAGTAAAAATACGAATTCCAACAAGACAAAC
AT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047368-exon-scaffold_126-1491911889:190350..192259 | TCONS_00047368-exon-scaffold_126-1491911889:190350..192259 | Clytia hemisphaerica | exon |
| TCONS_00047368-exon-scaffold_126-1510915933:190350..192259 | TCONS_00047368-exon-scaffold_126-1510915933:190350..192259 | Clytia hemisphaerica | exon |
| TCONS_00047368-exon-scaffold_126-1575043694:190350..192259 | TCONS_00047368-exon-scaffold_126-1575043694:190350..192259 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_126 | supercontig | scaffold_126:190350..192259 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR009721 | O-acyltransferase_WSD1_C |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004144 | diacylglycerol O-acyltransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0004144 |
diacylglycerol O-acyltransferase activity |
Blast
The following BLAST results are available for this feature:
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