TCONS_00047327 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00047327
Unique Name	TCONS_00047327
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1680

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_126:114384..120566+
coding sequence from alignment at scaffold_126:114384..120566+

transcript sequence

>TCONS_00047327 ID=TCONS_00047327|Name=TCONS_00047327|organism=Clytia hemisphaerica|type=transcript|length=1680bp
CTTTCTTGAGTCTCTTAAAAGAATTGACCGCCACGCGTGATCGGTGGGAT
AGATAAATGTCACCGAaagagttttttttaataagaagaTGAAATGATAT
AAAAAGGAGGTCCATTACGCTGAGGatcgaaaatcaatcaaaacTTTCAA
TCTTGTCAAAATTAGCAGACAGATCGGATCATCAACTTGTTATCATTGTT
ATTTgacataatttttcaaaacgaaattatttttacttttggaTTATTAC
GTTTATTAGCATTACTGCATTTCCTAAAAACGCAATGACATATATCTTTG
GTAGcataaaattgttgtttttctttctggTGGCAACCACGCTGTGGCAT
AACAGTGAAGGTTGTTCTGACAGGCTTCCCATACAATATTGTTCAAGTTA
CAAAGTGTTCTGTGATAGTGCCGGTTTCAAGGATTATTTAGCGGTCAACT
GCCCCCTGACCTGTAACAGATGCAAGAAAGGTCAAACAACGACATCTCAA
CCTATTAGAACTACCAGAAGGACCAACACAATACTCCAAGAACCTGGCAG
aaAAAATGTTGAATCTTGTGGAAGTACAAAACCGGGCTACACTAAAATTA
TTGGAGGGCGTAACACCAAACCAGGAAATTCACCGTGGCAGGTGGTATTG
AACAGAGAGAATTATTCAAAAGGGCGTTTTTGTGGCGGTGTTTTGATCTC
ACAAGAGTTTGTTTTGACTGCCGCCCATTGTTTTGATAATCAGAGGAATT
TCTCGAAATACGAAGTCATTGTCGGTGTCCATGACTTGAACACAGTCAAC
CGCTGGCAACAATCCTTCAAAATACAGCATGTTTTTATCCATCCAAAATA
CAGCCAATCGGGTGTTGACTACGATTCCGCCCTTATCCAGATCAAAGGCA
AAGTCCGATACAACGATCGTGTCCGGGCAGCCTGTCTTCCGGATGAAACT
ATGAATTTTGACGCTGGTACCATGTGTACGATTTCGGGATGGGGAAatgt
gaaagaaaaagaaagtggaCCCGCTATTATGCAAACAGCGCAAGTTCCAT
TGGTCAATCGCAAAATATGCAATACAACCTTCCATCAAAAACACAAGTAC
ACTGTCACAAGCCGTATGTTGTGCACTGCACACCAGAATGGCACCATCGG
GCCGTGTGATGGCGACTCTGGAAGTCCTCTTGTTTGCAAAGCTGTGTCCC
CAGACTCGGGTGAAGAGATTTGGTACGTTTGGGGCACCATATCATGGGGT
CTAGGTTGCGCAAGGAAAGGATTATATTCAGTGCATGCCAATGTTAAATA
TTTCTTATCTTGGATCAATAGTACTGTCTTTCCAAAGAAGCGTTCTGTGC
TGACAACATGACGTCATGATAGAAAGGATGCTGTAATGTAGCCAGATGTG
ACGTCATACGATATCATAGCGTTTGGTATGTAGCAGTGCTATGGTTACAG
ATTTAAGATGTTAGAAATTGTGACCAATGCCGAATGGAAGATATAGACAA
TACGTGCTACTAAGAATAGTTTGATCAAGATAAATTGGTAATGTGATCAA
AGGTTGACAAATAAATCCTTATCTGTAATAAATACAAGATTACATGATGC
ATGATAACAGATGATTTTGCATAGTGAACATTgtatttttcgtcaaaatc
ttttgaatttatcagaattaaatgATGATG

Run BLAST on NCBI

protein sequence of TCONS_00047327-protein

>TCONS_00047327-protein ID=TCONS_00047327-protein|Name=TCONS_00047327-protein|organism=Clytia hemisphaerica|type=polypeptide|length=358bp
MTYIFGSIKLLFFFLVATTLWHNSEGCSDRLPIQYCSSYKVFCDSAGFKD
YLAVNCPLTCNRCKKGQTTTSQPIRTTRRTNTILQEPGRKNVESCGSTKP
GYTKIIGGRNTKPGNSPWQVVLNRENYSKGRFCGGVLISQEFVLTAAHCF
DNQRNFSKYEVIVGVHDLNTVNRWQQSFKIQHVFIHPKYSQSGVDYDSAL
IQIKGKVRYNDRVRAACLPDETMNFDAGTMCTISGWGNVKEKESGPAIMQ
TAQVPLVNRKICNTTFHQKHKYTVTSRMLCTAHQNGTIGPCDGDSGSPLV
CKAVSPDSGEEIWYVWGTISWGLGCARKGLYSVHANVKYFLSWINSTVFP
KKRSVLTT

Run BLAST on NCBI

transcript from alignment at scaffold_126:114384..120566+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00047327 ID=TCONS_00047327|Name=TCONS_00047327|organism=Clytia hemisphaerica|type=transcript|length=6183bp|location=Sequence derived from alignment at scaffold_126:114384..120566+ (Clytia hemisphaerica)
CTTTCTTGAGTCTCTTAAAAGAATTGACCGCCACGCGTGATCGGTGGGAT
AGATAAATGTCACCGAaagagttttttttaataagaagaTGAAATGATAT
AAAAAGGAGGTCCATTACGCTGAGGatcgaaaatcaatcaaaacTTTCAA
TCTTGTCAAAATTAGCAGACAGATCGGATCATCAACTTGTTATCATTGTT
ATTTgacataatttttcaaaacgaaattatttttacttttggaTTATTAC
GTTTATTAGCATTACTGCATTTCCTAAAAACGCAATGACATATATCTTTG
GTAGcataaaattgttgtttttctttctggTGGCAACCACGCTGTGGCAT
AACAGTGAAGGTATGTATCTTGTTATTGAGTGACTGCCTACCTGATTGAC
TAGTCTTTAGCTTTGTCGACCAAATTTCATCTTGGTGATATACTTTATTT
TGCGATTTTTCTTTCAACGCTTAGAGATAGACAATGAAGTATGTattgca
gattttttttctatcGAACCAAAATGGGTTTCATTGAGTTTGGCTATTCA
ATTGATAAGCAGCAGTCTAATATCTATTTCAGTTAGCTTTGTTATCAAAG
AAGTCAATTATTAGCATGACTTGGCCCAGGAAAAAGGTTGTCTCATTGTT
TATtgtaaatttcaaccaaatattTCTCTCAGCATTCGGCATTGACAATT
AGTTCACTATTTGCCCAGGAAATTTACACCGGATCATTGAGACAGGCGGG
ATGTATATATTTCATGTCTGGTTTGCAGCACGGTTCGACAGTCAGATTAC
CCCTCAGATAAAAATGTATAGTGGTCTGTCTGAATACACTTTGTCTGTTc
caacataaacaaatacatactcAAAGATTGGTGATCAAAACAACCTTCTC
AACTTGATACGTGTACTCAATGGGTTTTTACCGATTTGTTTGGCAAAAAT
CTTTACATAGATTGACGAACAACCTTTTTGATGGCTCTCTAACAATACAT
GGATTTTATGGACTTTAGATGGACATTGTTTTTTGATATTTCGCACTAGT
AGGAATTAGACCatttcagacgttacggttccgtatcgttccaaaacaag
tgtgaacgtcaaaaaaacgtcaaaaaaagatgttaaaaagcaaaacagat
tgaaacggttttgctccactattttcatcggaacggaacatctccgtttt
cttgctccgaaacgtttcgaaaccaatatgaacactctcgattTGTGACG
AAAACCATACCGGAGCTGGCTATACGAAACCGTATCTGAACATGGTCTTT
GCAAAACGTAAGGACGCGAGGACGCGAGTGAGATGTTGatgaaaacaccc
ctgtctcagtgacccggtgcaGTGTTTTGACCTAATTAATGCAATTATTG
ACCAGGTTAAGACgataaatttcttatttttgttcAGGGAGGATTTGAAT
CTGTTTTGACCGGGTTTACTCATTATTCTACCAGTTTTTGGCAATCTTTC
CAGGGTGGATATGTCTGGGttactgatacaggggtgtaagaaACGTGACA
AGTTTTCCACGTAATGTATGTCTATGATAAGAATATGGTTTTTATTATTG
AATGCACTCATACGACATTTCCTAAGTAAACACTTAAAATTGCCACCCAC
TCTAGTCtaattaaaattgttctttggTAGCGTATTTGTCGACAATGTTG
CAATCGAAGTAGATCTGGCAATAGGCAAATTTCTTATTGAAGCCCGTTTG
AaatgataatgatgatgatgtAACTTATCACGAATTTTGTTTACGGAACG
AAGACCGGAACATACCGGAAGGACGCCGGTCATAACTTGTTTGTCGCGAG
ATGGACATGAAAGTTTTTTATGcgcatgaaaatatttttgatgtcaCGAA
AGGTTGACATAAAAAACTTTGTTTATTTGCTTTTTGAGGTAGTTTTctct
tcttgttgttttttaattaaAGAACCTTTGCTTAACTGTAAGCATTTTAT
ATTGAtcttaattttaaagaaaaaatcgcCATAACtcagaaaaaatatta
aaatgcaTCACATCTTTGAACATCCATAAAATTCACTAAGGTGAAAAAAT
CGATCATCTTCTAAAATATGAAATGCACATTGTTTCAAAGTTTATTGGAC
AAtatgaacattagatggacAATATATGGACACTCTTTTGTGCTTTGTAA
TCAATGCCTTTTCACAGCTCCAAAAGGGATATTTTACTTACATATAAGat
cataaaaacattttatttccTATAAAAGAATTTCCTTGTTGCATTTTTGA
GTTCAAtaacaattttatcaaaagtttttgtTCAAATATTAGGATTTGGT
TAATCTCCGTATTATTGAAAATAGTTGACATTATTGACGCGACTGTCTTA
AATGTTTGTGTGGCAACATTATGAACATTAGATTATTGGCCAGGACAGTT
TTGCCTTTGACCTTTATTTAACCTAAATAAATTTTAGATTCTTTTGCTTT
GCAAAACATACTTTTAGGATAACTTTTGTCTCGTTCCAGGCCCATTCTTT
GGTGGTATCTTAGGTATCTATTGATCAATAAACGTAGAACATGAAACAAG
GTCTACTGTCTCAATGACTGGTCGAAAGATTTTACGCAGTACACGAATTA
TATTTGTGAAAGCTTAAAAACGCAAGTGAGTTAGTTATAAAAAGTCACAT
TTAAgatgttttggttaaaaaacaTTCGGCCTAATGCAATGATTTTAAGA
AGTATGCCGTGCTAACATCCCTTAGCCATTATAGTTATAAAGCAAACTAA
CGTTTTTAAAGAAGTTAAAAAACACTCATTATATGgtacccgatgtagaa
atttgcTCCGACACGCTTTGTTCTAAAGGTCGGACATATTTGGATATATT
GACCCGCTCTTTTAGAGCTTCAAAGTAGGCGTCTGCCGATACgtcatcgg
aatatcagataaaaacACTCTCATCGACATCAATGTACAGCTAGTAGTAG
GGTGGTCGGTTGGTAGGTCCAAATTTCAGATCCCCAGTGACATTAAATTC
AGCTCGCTTAGAATCATCAAGGGGTCTCGGAGCgaattctaaattgattt
aggagaattttttaaaatatcaTTTGTTTCTTCGATTGTAAATCAATTCA
CACAAATCAATGTTATGTAACCTTCTACAGTAACAACTTTTCCTACCTTA
ACCTCGAATAACTTGTCTCGCCAGGAAAGCTGAATAAATCTGTGCTGTTT
GTGGAGCCTGGATAGTGAAAGCTGAAGGCTATTTTTAGTCTCACTTCTTG
CTTTAAATTctatttgattttgattgtctGTGTGGTCTGTCTATGGATTG
TGATTTTCAAATATACATACAAATTCCTCTTATACTATGGACGTTGAAAG
GATATTATTTCCGTTTGTTCGATGTTCTGCGGGAAAGAATATTGGTATCC
TGTTTCAAAGGATGTCCTTCTACATCAGGGGAAATTCTATGAAGGCTGTT
CTCACATTTTTTACTGGCTGCAACAGATTTCCTCAAGATTGTCTAGtggg
taaaattttgaaaactttcttgcagcctcgtccccgtgtatcccagccTT
TATTTATGTTACTGATTGAAGCCAGAGAATacccagggtattatctagcg
ctatcagtgaGTAtcaaagctgataatgcgcagggaacgaggttgatttt
cttgtaaatttatttctttcgttatttctatatttttttcgTTCGTAGGT
TGTTCTGACAGGCTTCCCATACAATATTGTTCAAGTTACAAAGTGTTCTG
TGATAGTGCCGGTTTCAAGGATTATTTAGCGGTCAACTGCCCCCTGACCT
GTAACAGATGCAAGAAAGGTAagttaaatatttaaaaaaattaacttttg
taCACAATATTACAGAATTCATTTTGGCGAATTAAGAAAATATCTTATTT
TGGGAGAATTTGATTTTGGCGAATGATCCGTCATTTCATAATTATTTTAG
CCGAGAAAGGAGGAAGAAGGGTTTGTTTCAAGAAAGAAgtacgaaaaaaa
ttgaaaaagaattaaaattcgactagttataattttttttgaatttttga
gaaatttcgcAAAATTTGCCAATTTGCCACTGGATTTTTCAATAATTAGA
TGTATTCACCCAAAAAGTCACagtgatttctttatttttcaccggtttta
aaattttcctagCTGATAATTTATTGGTTATTTATATATGCAGGTCAAAC
AACGACATCTCAACCTATTAGAACTACCAGAAGGACCAACACAATACTCC
AAGAACCTGGCAGaagtatgattttcaaactaagtttTATCTAATATCCT
GGAAAACCttttgtacaatttttaaaGCTCCGAAACTTAGTACGAGTATC
ACTTGATTTCAGCAAAACAGATAGAAAAGCTTTTAATCAATGCTGTAGTA
CCAGTTTATTCTCCCACATGTTTTTCATTTGTTAATGTTAAGTCAATCGT
TTCACTCTATTTTTATTATAGAAAATGTTGAATCTTGTGGAAGTACAAAA
CCGGGCTACACTAAAATTATTGGAGGGCGTAACACCAAACCAGGAAATTC
ACCGTGGCAGGTGGTATTGAACAGAGAGAATTATTCAAAAGGGCGTTTTT
GTGGCGGTGTTTTGATCTCACAAGAGTTTGTTTTGACTGCCGCCCATTGT
TTTGATAATCAGAGGAATTTCTCGAAATACGAAGTCATTGTCGGTAAGCA
TTGGTTTCTATCTTTTCCCCTTTTTCATACTTGAAGACTCCCTTGTTGTC
TCGATTGTCTCGATTGTCAAATGCTGTTTAAATCGTTTCACCAAGAGTAG
TCGATTGGTGTGCATTAATACAACCAGAAGTCATTAACATaagatttcaa
gaaaaaaagaagttaaTTAATTTAGAGCGGGGTTCTCTCATTTATCTTAT
CTTTCAAATGTAGGTGTCCATGACTTGAACACAGTCAACCGCTGGCAACA
ATCCTTCAAAATACAGCATGTTTTTATCCATCCAAAATACAGCCAATCGG
GTGTTGACTACGATTCCGCCCTTATCCAGATCAAAGGCAAAGTCCGATAC
AACGATCGTGTCCGGGCAGCCTGTCTTCCGGATGAAACTATGAATTTTGA
CGCTGGTACCATGTGTACGATTTCGGGATGGGGAAatgtgaaagaaaaag
aaagtggaCCCGCTGTAAGTATTATGAATATATCGTTTTTATCGTTAGAT
GAATTTTTTAGGGCTGAAGGTTTAATTACACAGAAAgaagtattttcaaa
aataNATGAATTTTTTAGGGCTGAAGTTTTAATTACACagaaagaagtat
tttttttaaataaaagaatcaCAATGCTTATTCTGCTCCTAATAGCCTGA
TTGTAACATATTATTTCAAAGGTTTCATGATCTTAACTTAGCTTAGTTAT
AAACTGACCCTTCAAGATACACTTATGAAGAACAAGTGGTTATGATATTA
AATTGTCTTTACCAATTTCCAATAACAGATTATGCAAACAGCGCAAGTTC
CATTGGTCAATCGCAAAATATGCAATACAACCTTCCATCAAAAACACAAG
TACACTGTCACAAGCCGTATGTTGTGCACTGCACACCAGAATGGCACCAT
CGGGCCGTGTGATGGCGACTCTGGAAGTCCTCTTGTTTGCAAAGCTGTGT
CCCCAGACTCGGGTGAAGAGATTTGGTACGTTTGGGGCACCATATCATGG
GGTCTAGGTTGCGCAAGGAAAGGATTATATTCAGTGCATGCCAATGTTAA
ATATTTCTTATCTTGGATCAATAGTACTGTCTTTCCAAAGAAGCGTTCTG
TGCTGACAACATGACGTCATGATAGAAAGGATGCTGTAATGTAGCCAGAT
GTGACGTCATACGATATCATAGCGTTTGGTATGTAGCAGTGCTATGGTTA
CAGATTTAAGATGTTAGAAATTGTGACCAATGCCGAATGGAAGATATAGA
CAATACGTGCTACTAAGAATAGTTTGATCAAGATAAATTGGTAATGTGAT
CAAAGGTTGACAAATAAATCCTTATCTGTAATAAATACAAGATTACATGA
TGCATGATAACAGATGATTTTGCATAGTGAACATTgtatttttcgtcaaa
atcttttgaatttatcagaattaaatgATGATG

Coding sequence (CDS) from alignment at scaffold_126:114384..120566+

>TCONS_00047327 ID=TCONS_00047327|Name=TCONS_00047327|organism=Clytia hemisphaerica|type=CDS|length=6462bp|location=Sequence derived from alignment at scaffold_126:114384..120566+ (Clytia hemisphaerica)
ATGACATATATCTTTGGTAGcataaaattgttgtttttctttctggTGGC
AACCACGCTGTGGCATAACAGTGAAGGTTGTTCTGACAGGCTTCCCATAC
AATATTGTTCAAGTTACAAAGTGTTCTGTGATAGTGCCGGTTTCAAGGAT
TATTTAGCGGTCAACTGCCCCCTGACCTGTAACAGATGCAAGAAAGGTCA
AACAACGACATCTCAACCTATTAGAACTACCAGAAGGACCAACACAATAC
TCCAAGAACCTGGCAGaaAAAATGTTGAATCTTGTGGAAGTACAAAACCG
GGCTACACTAAAATTATTGGAGGGCGTAACACCAAACCAGGAAATTCACC
GTGGCAGGTGGTATTGAACAGAGAGAATTATTCAAAAGGGCGTTTTTGTG
GCGGTGTTTTGATCTCACAAGAGTTTGTTTTGACTGCCGCCCATTGTTTT
GATAATCAGAGGAATTTCTCGAAATACGAAGTCATTGTCGGTGTCCATGA
CTTGAACACAGTCAACCGCTGGCAACAATCCTTCAAAATACAGCATGTTT
TTATCCATCCAAAATACAGCCAATCGGGTGTTGACTACGATTCCGCCCTT
ATCCAGATCAAAGGCAAAGTCCGATACAACGATCGTGTCCGGGCAGCCTG
TCTTCCGGATGAAACTATGAATTTTGACGCTGGTACCATGTGTACGATTT
CGGGATGGGGAAatgtgaaagaaaaagaaagtggaCCCGCTATTATGCAA
ACAGCGCAAGTTCCATTGGTCAATCGCAAAATATGCAATACAACCTTCCA
TCAAAAACACAAGTACACTGTCACAAGCCGTATGTTGTGCACTGCACACC
AGAATGGCACCATCGGGCCGTGTGATGGCGACTCTGGAAGTCCTCTTGTT
TGCAAAGCTGTGTCCCCAGACTCGGGTGAAGAGATTTGGTACGTTTGGGG
CACCATATCATGGGGTCTAGGTTGCGCAAGGAAAGGATTATATTCAGTGC
ATGCCAATGTTAAATATTTCTTATCTTGGATCAATAGTACTGTCTTTCCA
AAGAAGCGTTCTGTGCTGACAACATGAATGACATATATCTTTGGTAGcat
aaaattgttgtttttctttctggTGGCAACCACGCTGTGGCATAACAGTG
AAGGTTGTTCTGACAGGCTTCCCATACAATATTGTTCAAGTTACAAAGTG
TTCTGTGATAGTGCCGGTTTCAAGGATTATTTAGCGGTCAACTGCCCCCT
GACCTGTAACAGATGCAAGAAAGGTCAAACAACGACATCTCAACCTATTA
GAACTACCAGAAGGACCAACACAATACTCCAAGAACCTGGCAGaaAAAAT
GTTGAATCTTGTGGAAGTACAAAACCGGGCTACACTAAAATTATTGGAGG
GCGTAACACCAAACCAGGAAATTCACCGTGGCAGGTGGTATTGAACAGAG
AGAATTATTCAAAAGGGCGTTTTTGTGGCGGTGTTTTGATCTCACAAGAG
TTTGTTTTGACTGCCGCCCATTGTTTTGATAATCAGAGGAATTTCTCGAA
ATACGAAGTCATTGTCGGTGTCCATGACTTGAACACAGTCAACCGCTGGC
AACAATCCTTCAAAATACAGCATGTTTTTATCCATCCAAAATACAGCCAA
TCGGGTGTTGACTACGATTCCGCCCTTATCCAGATCAAAGGCAAAGTCCG
ATACAACGATCGTGTCCGGGCAGCCTGTCTTCCGGATGAAACTATGAATT
TTGACGCTGGTACCATGTGTACGATTTCGGGATGGGGAAatgtgaaagaa
aaagaaagtggaCCCGCTATTATGCAAACAGCGCAAGTTCCATTGGTCAA
TCGCAAAATATGCAATACAACCTTCCATCAAAAACACAAGTACACTGTCA
CAAGCCGTATGTTGTGCACTGCACACCAGAATGGCACCATCGGGCCGTGT
GATGGCGACTCTGGAAGTCCTCTTGTTTGCAAAGCTGTGTCCCCAGACTC
GGGTGAAGAGATTTGGTACGTTTGGGGCACCATATCATGGGGTCTAGGTT
GCGCAAGGAAAGGATTATATTCAGTGCATGCCAATGTTAAATATTTCTTA
TCTTGGATCAATAGTACTGTCTTTCCAAAGAAGCGTTCTGTGCTGACAAC
ATGAATGACATATATCTTTGGTAGcataaaattgttgtttttctttctgg
TGGCAACCACGCTGTGGCATAACAGTGAAGGTTGTTCTGACAGGCTTCCC
ATACAATATTGTTCAAGTTACAAAGTGTTCTGTGATAGTGCCGGTTTCAA
GGATTATTTAGCGGTCAACTGCCCCCTGACCTGTAACAGATGCAAGAAAG
GTCAAACAACGACATCTCAACCTATTAGAACTACCAGAAGGACCAACACA
ATACTCCAAGAACCTGGCAGaaAAAATGTTGAATCTTGTGGAAGTACAAA
ACCGGGCTACACTAAAATTATTGGAGGGCGTAACACCAAACCAGGAAATT
CACCGTGGCAGGTGGTATTGAACAGAGAGAATTATTCAAAAGGGCGTTTT
TGTGGCGGTGTTTTGATCTCACAAGAGTTTGTTTTGACTGCCGCCCATTG
TTTTGATAATCAGAGGAATTTCTCGAAATACGAAGTCATTGTCGGTGTCC
ATGACTTGAACACAGTCAACCGCTGGCAACAATCCTTCAAAATACAGCAT
GTTTTTATCCATCCAAAATACAGCCAATCGGGTGTTGACTACGATTCCGC
CCTTATCCAGATCAAAGGCAAAGTCCGATACAACGATCGTGTCCGGGCAG
CCTGTCTTCCGGATGAAACTATGAATTTTGACGCTGGTACCATGTGTACG
ATTTCGGGATGGGGAAatgtgaaagaaaaagaaagtggaCCCGCTATTAT
GCAAACAGCGCAAGTTCCATTGGTCAATCGCAAAATATGCAATACAACCT
TCCATCAAAAACACAAGTACACTGTCACAAGCCGTATGTTGTGCACTGCA
CACCAGAATGGCACCATCGGGCCGTGTGATGGCGACTCTGGAAGTCCTCT
TGTTTGCAAAGCTGTGTCCCCAGACTCGGGTGAAGAGATTTGGTACGTTT
GGGGCACCATATCATGGGGTCTAGGTTGCGCAAGGAAAGGATTATATTCA
GTGCATGCCAATGTTAAATATTTCTTATCTTGGATCAATAGTACTGTCTT
TCCAAAGAAGCGTTCTGTGCTGACAACATGAATGACATATATCTTTGGTA
GcataaaattgttgtttttctttctggTGGCAACCACGCTGTGGCATAAC
AGTGAAGGTTGTTCTGACAGGCTTCCCATACAATATTGTTCAAGTTACAA
AGTGTTCTGTGATAGTGCCGGTTTCAAGGATTATTTAGCGGTCAACTGCC
CCCTGACCTGTAACAGATGCAAGAAAGGTCAAACAACGACATCTCAACCT
ATTAGAACTACCAGAAGGACCAACACAATACTCCAAGAACCTGGCAGaaA
AAATGTTGAATCTTGTGGAAGTACAAAACCGGGCTACACTAAAATTATTG
GAGGGCGTAACACCAAACCAGGAAATTCACCGTGGCAGGTGGTATTGAAC
AGAGAGAATTATTCAAAAGGGCGTTTTTGTGGCGGTGTTTTGATCTCACA
AGAGTTTGTTTTGACTGCCGCCCATTGTTTTGATAATCAGAGGAATTTCT
CGAAATACGAAGTCATTGTCGGTGTCCATGACTTGAACACAGTCAACCGC
TGGCAACAATCCTTCAAAATACAGCATGTTTTTATCCATCCAAAATACAG
CCAATCGGGTGTTGACTACGATTCCGCCCTTATCCAGATCAAAGGCAAAG
TCCGATACAACGATCGTGTCCGGGCAGCCTGTCTTCCGGATGAAACTATG
AATTTTGACGCTGGTACCATGTGTACGATTTCGGGATGGGGAAatgtgaa
agaaaaagaaagtggaCCCGCTATTATGCAAACAGCGCAAGTTCCATTGG
TCAATCGCAAAATATGCAATACAACCTTCCATCAAAAACACAAGTACACT
GTCACAAGCCGTATGTTGTGCACTGCACACCAGAATGGCACCATCGGGCC
GTGTGATGGCGACTCTGGAAGTCCTCTTGTTTGCAAAGCTGTGTCCCCAG
ACTCGGGTGAAGAGATTTGGTACGTTTGGGGCACCATATCATGGGGTCTA
GGTTGCGCAAGGAAAGGATTATATTCAGTGCATGCCAATGTTAAATATTT
CTTATCTTGGATCAATAGTACTGTCTTTCCAAAGAAGCGTTCTGTGCTGA
CAACATGAATGACATATATCTTTGGTAGcataaaattgttgtttttcttt
ctggTGGCAACCACGCTGTGGCATAACAGTGAAGGTTGTTCTGACAGGCT
TCCCATACAATATTGTTCAAGTTACAAAGTGTTCTGTGATAGTGCCGGTT
TCAAGGATTATTTAGCGGTCAACTGCCCCCTGACCTGTAACAGATGCAAG
AAAGGTCAAACAACGACATCTCAACCTATTAGAACTACCAGAAGGACCAA
CACAATACTCCAAGAACCTGGCAGaaAAAATGTTGAATCTTGTGGAAGTA
CAAAACCGGGCTACACTAAAATTATTGGAGGGCGTAACACCAAACCAGGA
AATTCACCGTGGCAGGTGGTATTGAACAGAGAGAATTATTCAAAAGGGCG
TTTTTGTGGCGGTGTTTTGATCTCACAAGAGTTTGTTTTGACTGCCGCCC
ATTGTTTTGATAATCAGAGGAATTTCTCGAAATACGAAGTCATTGTCGGT
GTCCATGACTTGAACACAGTCAACCGCTGGCAACAATCCTTCAAAATACA
GCATGTTTTTATCCATCCAAAATACAGCCAATCGGGTGTTGACTACGATT
CCGCCCTTATCCAGATCAAAGGCAAAGTCCGATACAACGATCGTGTCCGG
GCAGCCTGTCTTCCGGATGAAACTATGAATTTTGACGCTGGTACCATGTG
TACGATTTCGGGATGGGGAAatgtgaaagaaaaagaaagtggaCCCGCTA
TTATGCAAACAGCGCAAGTTCCATTGGTCAATCGCAAAATATGCAATACA
ACCTTCCATCAAAAACACAAGTACACTGTCACAAGCCGTATGTTGTGCAC
TGCACACCAGAATGGCACCATCGGGCCGTGTGATGGCGACTCTGGAAGTC
CTCTTGTTTGCAAAGCTGTGTCCCCAGACTCGGGTGAAGAGATTTGGTAC
GTTTGGGGCACCATATCATGGGGTCTAGGTTGCGCAAGGAAAGGATTATA
TTCAGTGCATGCCAATGTTAAATATTTCTTATCTTGGATCAATAGTACTG
TCTTTCCAAAGAAGCGTTCTGTGCTGACAACATGAATGACATATATCTTT
GGTAGcataaaattgttgtttttctttctggTGGCAACCACGCTGTGGCA
TAACAGTGAAGGTTGTTCTGACAGGCTTCCCATACAATATTGTTCAAGTT
ACAAAGTGTTCTGTGATAGTGCCGGTTTCAAGGATTATTTAGCGGTCAAC
TGCCCCCTGACCTGTAACAGATGCAAGAAAGGTCAAACAACGACATCTCA
ACCTATTAGAACTACCAGAAGGACCAACACAATACTCCAAGAACCTGGCA
GaaAAAATGTTGAATCTTGTGGAAGTACAAAACCGGGCTACACTAAAATT
ATTGGAGGGCGTAACACCAAACCAGGAAATTCACCGTGGCAGGTGGTATT
GAACAGAGAGAATTATTCAAAAGGGCGTTTTTGTGGCGGTGTTTTGATCT
CACAAGAGTTTGTTTTGACTGCCGCCCATTGTTTTGATAATCAGAGGAAT
TTCTCGAAATACGAAGTCATTGTCGGTGTCCATGACTTGAACACAGTCAA
CCGCTGGCAACAATCCTTCAAAATACAGCATGTTTTTATCCATCCAAAAT
ACAGCCAATCGGGTGTTGACTACGATTCCGCCCTTATCCAGATCAAAGGC
AAAGTCCGATACAACGATCGTGTCCGGGCAGCCTGTCTTCCGGATGAAAC
TATGAATTTTGACGCTGGTACCATGTGTACGATTTCGGGATGGGGAAatg
tgaaagaaaaagaaagtggaCCCGCTATTATGCAAACAGCGCAAGTTCCA
TTGGTCAATCGCAAAATATGCAATACAACCTTCCATCAAAAACACAAGTA
CACTGTCACAAGCCGTATGTTGTGCACTGCACACCAGAATGGCACCATCG
GGCCGTGTGATGGCGACTCTGGAAGTCCTCTTGTTTGCAAAGCTGTGTCC
CCAGACTCGGGTGAAGAGATTTGGTACGTTTGGGGCACCATATCATGGGG
TCTAGGTTGCGCAAGGAAAGGATTATATTCAGTGCATGCCAATGTTAAAT
ATTTCTTATCTTGGATCAATAGTACTGTCTTTCCAAAGAAGCGTTCTGTG
CTGACAACATGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_030150	XLOC_030150	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00047327-protein	TCONS_00047327-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_126	supercontig	scaffold_126:114384..120566 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.023519	0.0546155	0	0.162623	0.0257014	0.0930229	0.145145	0.142267	0.0755232	0.0488698	0.144563	1.66818	0.982816	1.56124	0.249847	0.398318	0.463936	0.692228	0.214627	2.35519	2.49092	1.71451	3.09233	4.06544	6.84064	6.15115	3.21175	0.0535384	0

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR001314	Peptidase_S1A
IPR003582	ShKT_dom
IPR001254	Trypsin_dom
IPR033116	TRYPSIN_SER
IPR018114	TRYPSIN_HIS
IPR009003	Peptidase_S1_PA

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004252	serine-type endopeptidase activity

Blast

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BLAST of TCONS_00047327 vs. Swiss-Prot (Human)
Match: CORIN (Atrial natriuretic peptide-converting enzyme OS=Homo sapiens GN=CORIN PE=1 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 6.009e-45
Identity = 86/247 (34.82%), Postives = 148/247 (59.92%), Query Frame = 3

Query:  594 KIIGGRNTKPGNSPWQVVLNRENYSKGRFCGGVLISQEFVLTAAHCFDNQRNFSKYEVIVGVHDLNTVNRWQQSFKIQHVFIHPKYSQSGVDYDSALIQIKGKVRYNDRVRAACLPDETMNFDAGTMCTISGWGNVKEKESGPAIMQTAQVPLVNRKICNTTFHQKHKYTVTSRMLCTAHQNGTIGPCDGDSGSPLVCKAVSPDSGEEIWYVWGTISWGLGCARKGL-YSVHANVKYFLSWINSTVF 1331
            +I+GGR ++PG  PWQ  L  E    G  CG VLI++++VLT AHCF+ + N + ++V++G+++L+  + + Q+  ++ + +HP+YS++ VDYD +++++   +     VR  CLP+     +  T C I+GWG++  K   P  +Q  +V +++ + C + F  K   T+T+RM+C  +++GT+  C GDSG PLVC+          W ++G  SWG  C  K L   V++NV YF+ WI   ++
Sbjct:  801 RILGGRTSRPGRWPWQCSLQSE--PSGHICGCVLIAKKWVLTVAHCFEGRENAAVWKVVLGINNLDHPSVFMQTRFVKTIILHPRYSRAVVDYDISIVELSEDISETGYVRPVCLPNPEQWLEPDTYCYITGWGHMGNKM--PFKLQEGEVRIISLEHCQSYFDMK---TITTRMICAGYESGTVDSCMGDSGGPLVCEKPGGR-----WTLFGLTSWGSVCFSKVLGPGVYSNVSYFVEWIKRQIY 1035

The following BLAST results are available for this feature:

BLAST of TCONS_00047327 vs. Swiss-Prot (Human)

BLAST of TCONS_00047327 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CORIN	6.009e-45	34.82	Atrial natriuretic peptide-converting enzyme OS=Ho...	[more]

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TCONS_00047327 (transcript) - C. hemisphaerica