TCONS_00047298 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047298
Unique NameTCONS_00047298
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2842

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047298 ID=TCONS_00047298|Name=TCONS_00047298|organism=Clytia hemisphaerica|type=transcript|length=2842bp
ATTCCTTTCAGGTaacttttagagaaaaaaatgacagaaacaATTTCTGA
TTTTATGTTGGAATGTGAACTAGACGGAATCCCCAAACTTCTTTCATTAG
AAGATCTTTTATTAGATGAATGTGATGAGTATAAAAGATGTTTGCTGTCG
ACGAAGTTGAAGGATCAACAGCtccaaaaaatggtcaaattcaTCTTGAA
GACGCGCTCTTACCAAGCTTGCTTTTTCCAAGATGAGAACACTGATAGCC
TCGATCTCATTAAAACGAAAGCTCCTATCAGTTATTTGATGTTCCCCATA
GCAACGAAAGCTATCAAAACAGGGAGCCGTTCAGAACAAGTCTTCTTGCA
AGACTCTGATGTTGATTACATTTATGAGATTGGTCCTCTGCTGGTGGACG
ATATTAGCCTACTGAATGAAACCATAAAATCGCGAAAGCATAGCCTATGG
tacaaagaaacaaagaatGCTGGGTTTTACACCGTCATAGATGACGAGGG
TGGACATATAACAGCAGTTGCAATGCAAGCTAAAATTGATTCGTCCGCAA
AGTCAATAAAGTTGctttCAGAACGTAAGGAAGTTTCAGCAGTTTTAACC
ACCAACCAAAACGCTGAAGATGATAAGGATGACGATTCACTTGGTGAAGA
TAGGGTCATTGCTTTACCTTTGAAAAAATGGCCTCGACCTGCTTGGAAGT
CATTTAGCGAAAGAAAGCCTGTTTATTTGCAAAGCATAATGGATAAATTA
GAAGAGGCTACCATTTATCTGGTCCCCAAAGCACATCCTGACAGTGATGA
TTGTTGGATTGAATGGAgattatcattttcaatggTGGAGAAAGAAATCA
TGCTTAACTTGCCCCACTTGTACCGGAAAGTCTATCTCATCTGCAAGGAG
ATGGCGAATGATTTGAAAGTCAAGAATGTGTATTACTCATACGCTTTGAA
AACCACTTTCTTGTGGCAATGTGAGGCGTGGTCCAAAACAGGCATTGTAT
ACACATTAGACCACATCTTAGATATGGTACAGGACGTCTTTCAGCGTCTT
TACAAAGCTCATGAAACGAAAGACCTCCAAAATTACTTTGTTCCCGGTAT
GAACTTATTTGAACTGATCTCAGATTCGAAGAAGGAATCTGTAGCCTTGA
AAAGGAAGTTTTATTGGTACCAACTGGGCCACGACGGAGACGATAGCACC
TTACAGAATGATGTATTAGTGAAAGCAGACAAACATCTATTGAACTTACT
GAAGATATACACAGAGAAGAAATCCCTCATTAcgaaaatcttacaaaaat
tcCAAGTACCTTTCTTTCCCATTGTTTACCAACAACTTGTAACATCAATT
AAAGATGACCTTGATATTCAACGTGGTGTAGTCATGTGGGACCATCAACC
AGAATATGACGGCTTGAATGCAATCCTTAAGAAATATCACCCATCACATT
ACAACCTGTACAATCTTTCTGTTGACATCTCGCACCAAGATCCTGACATG
TTAAACCACGAATGGAATGAGCGCATCCTGACAGAGTTGTACATCACTTT
TCTTCTGCTGCTTTCCATAACAAGTTTGCAGCCTCGCACAGGTTGTAAAG
AATATTTGATGTATGTCTTATACAATATAAGCATCTTTTGGAGAGAGAAT
CGTCTGAGTAGAAGCCAACAAAACACAGGAGCAGGATCAACTATTTTTCA
GGGAACTGAAGAAGAAGCTTTCGTCAAAATTCTTGAATATTACAAGTCCT
TGGCTGTCTATTTCTTTGGTGAAAAAGAATGGCTATTACAAACACCTGAT
GCTTCAGGTTACACAGACCCTCTTCCTGATTTCTTCCATCACAAGCAGGA
TCCTTACATGTCCTTCTTGAATCAGGAACTTTCTAAATCCTTCGATTCAG
ATATGATGACACCTGATGATCTTGAAAAATGTTGGCTCACTGGAAGCTTG
GATGAAGAGATGTttcagatgacgtcatcaaaagaaGAATTGCTCAAGAA
GCAATATGTtgaaaaattcgatgaaaacCTCAAAAAGAAACGCCTTCGTA
AAAGCAAAATCCTTTCCTTTGGAAATGCTGAAGGATGCAGAAAGGTGCAT
GACAAAGTTTCGAAATATCCTTTCTACCAGCAGGATGCAGACTTTCAACT
ATTGGTGAATCAATTGAACATCAACTGGCAACGAAATCTTCGTCAACGGC
TTTCGAAGGAGAAAGAAATTCAGGAGAAAGATGATAGCAATGAAGAACCT
CTTTTCAATCTAAGCCAAAAATATCCGCATAGTTTCCTCATAAAATGTCT
TTTACCGCAAATGTGTCAGATGTATAACTATGGATTCACCAGCAATAAAT
TCGATTTTCCGACACCAGCTAAATATCTCTCTTTTATTATGCAATTCCAC
ACGAATGCGATGGAGTATGATTATCAAACTCGCCAAGCGTCTAAAGAAGA
GTCCAAGCGTCTACAAAAATGGGGTTATTGCGTTCCCGAGGATGACGGCG
TGGTTTTACGTACTTACGATAAACGCTTGCATAACACCTTTCTGCATTCG
TATGACTCAGTAATTTGAGCAACAGACATTGAAGAAGTTACTTTAAGGAC
GATTTCACGCCTGGATACATTAAGAACCTTTTGATACCATACGCACGTTT
TTTAAttgataagaaaattttttgatataaaagaaaataattataTTAAT
ATGATACAATATTATTTGTATTTAGATCACGTACTGTAAATTGGTGCACT
GAAAAAGGGAGGTCCGATTATTAAACCCTATTTCGCCATTCGCCCGTCAA
AATGAGAGCATAAATTTCTTGAGGTTTGAGTTTTCGTTTCCG
Run BLAST on NCBI

protein sequence of TCONS_00047298-protein

>TCONS_00047298-protein ID=TCONS_00047298-protein|Name=TCONS_00047298-protein|organism=Clytia hemisphaerica|type=polypeptide|length=845bp
MTETISDFMLECELDGIPKLLSLEDLLLDECDEYKRCLLSTKLKDQQLQK
MVKFILKTRSYQACFFQDENTDSLDLIKTKAPISYLMFPIATKAIKTGSR
SEQVFLQDSDVDYIYEIGPLLVDDISLLNETIKSRKHSLWYKETKNAGFY
TVIDDEGGHITAVAMQAKIDSSAKSIKLLSERKEVSAVLTTNQNAEDDKD
DDSLGEDRVIALPLKKWPRPAWKSFSERKPVYLQSIMDKLEEATIYLVPK
AHPDSDDCWIEWRLSFSMVEKEIMLNLPHLYRKVYLICKEMANDLKVKNV
YYSYALKTTFLWQCEAWSKTGIVYTLDHILDMVQDVFQRLYKAHETKDLQ
NYFVPGMNLFELISDSKKESVALKRKFYWYQLGHDGDDSTLQNDVLVKAD
KHLLNLLKIYTEKKSLITKILQKFQVPFFPIVYQQLVTSIKDDLDIQRGV
VMWDHQPEYDGLNAILKKYHPSHYNLYNLSVDISHQDPDMLNHEWNERIL
TELYITFLLLLSITSLQPRTGCKEYLMYVLYNISIFWRENRLSRSQQNTG
AGSTIFQGTEEEAFVKILEYYKSLAVYFFGEKEWLLQTPDASGYTDPLPD
FFHHKQDPYMSFLNQELSKSFDSDMMTPDDLEKCWLTGSLDEEMFQMTSS
KEELLKKQYVEKFDENLKKKRLRKSKILSFGNAEGCRKVHDKVSKYPFYQ
QDADFQLLVNQLNINWQRNLRQRLSKEKEIQEKDDSNEEPLFNLSQKYPH
SFLIKCLLPQMCQMYNYGFTSNKFDFPTPAKYLSFIMQFHTNAMEYDYQT
RQASKEESKRLQKWGYCVPEDDGVVLRTYDKRLHNTFLHSYDSVI
Run BLAST on NCBI

transcript from alignment at scaffold_124:227339..230807-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047298 ID=TCONS_00047298|Name=TCONS_00047298|organism=Clytia hemisphaerica|type=transcript|length=3469bp|location=Sequence derived from alignment at scaffold_124:227339..230807- (Clytia hemisphaerica)
ATTCCTTTCAGGTAACTTTTAGAGAAAAAAATGACAGAAACAATTTCTGA TTTTATGTTGGAATGTGAACTAGACGGAATCCCCAAACTTCTTTCATTAG AAGATCTTTTATTAGATGAATGTGATGAGTATAAAAGATGTTTGCTGTCG ACGAAGTTGAAGGATCAACAGCTCCAAAAAATGGTCAAATTCATCTTGAA GACGCGCTCTTACCAAGCTTGCTTTTTCCAAGATGAGAACACTGATAGCC TCGATCTCATTAAAACGAAAGCTCCTATCAGTTATTTGATGTTCCCCATA GCAACGAAAGCTATCAAAACAGGGAGCCGTTCAGAACAAGTCTTCTTGCA AGACTCTGATGTTGATTACATTTATGAGATTGGTCCTCTGCTGGTGGACG ATATTAGCCTACTGAATGAAACCATAAAATCGCGAAAGCATAGCCTATGG TACAAAGAAACAAAGAATGCTGGGTTTTACACCGTCATAGATGACGAGGG TGGACATATAACAGCAGTTGCAATGCAAGCTAAAATTGATTCGTCCGCAA AGTCAATAAAGTTGGTAAGTAAGCCGGATAAAACCTTAATGATGATCTAA AATACCAGCCATCTAAACACATTCGAATTTTGTTTGATTTTTTTTAAGTT GACCAACATCTCTGAGTGTTAGTTAGTCTGAAATTTGGTACGTGGCAAAT CATGCAATTTTCACCCTATTAAAATAGTTTTCAAGTTTTCTTTTTTCTTT TTCAGCTTTCAGAACGTAAGGAAGTTTCAGCAGTTTTAACCACCAACCAA AACGCTGAAGATGATAAGGATGACGATTCACTTGGTGAAGATAGGGTCAT TGCTTTACCTTTGAAAAAATGGCCTCGACCTGCTTGGAAGTCATTTAGCG AAAGAAAGCCTGTTTATTTGCAAAGCATAATGGATAAATTAGAAGGTAAG TAGTTCAATCCTCTCTGATTTCATTGTTCGGTTTTGGAAAAAATACTAGA AATTGTTTTTAGATCTTTAAATCGAAGAGTTGTTTTGTTAAGATGTTAAA AATATGATAAATATGGTTGGTTATCGCCAACACCTATCCATTGGAATACA ATTGGAGTCTCTTTAACTCGAACCTCTATAACTCAAATGTCTCTTTAACT CGAGCAAGTTTTCTTGTCCCTTCAGTTAACAATGTCTTATAATCCGTTAT CAATAACTCGAAATTTCCTCGATAACTCGAACAAATTTGTGGATCCAATG CGGATTTGAGTTATGAAGACTCCACTTTATTTTTAATTTAGCACGGAAGA GGAATAGGGTGATGAATTCAACATCTCATCATTGGATATTATAATGATTA ATCTTTTTCATATTCTTTGTTATCATTATAGAGGCTACCATTTATCTGGT CCCCAAAGCACATCCTGACAGTGATGATTGTTGGATTGAATGGAGATTAT CATTTTCAATGGTGGAGAAAGAAATCATGCTTAACTTGCCCCACTTGTAC CGGAAAGTCTATCTCATCTGCAAGGAGATGGCGAATGATTTGAAAGTCAA GAATGTGTATTACTCATACGCTTTGAAAACCACTTTCTTGTGGCAATGTG AGGCGTGGTCCAAAACAGGCATTGTATACACATTAGACCACATCTTAGAT ATGGTACAGGACGTCTTTCAGCGTCTTTACAAAGCTCATGAAACGAAAGA CCTCCAAAATTACTTTGTTCCCGGTATGAACTTATTTGAACTGATCTCAG ATTCGAAGAAGGAATCTGTAGCCTTGAAAAGGAAGTTTTATTGGTACCAA CTGGGCCACGACGGAGACGATAGCACCTTACAGAATGATGTATTAGTGAA AGCAGACAAACATCTATTGAACTTACTGAAGATATACACAGAGAAGAAAT CCCTCATTACGAAAATCTTACAAAAATTCCAAGTACCTTTCTTTCCCATT GTTTACCAACAACTTGTAACATCAATTAAAGATGACCTTGATATTCAACG TGGTGTAGTCATGTGGGACCATCAACCAGAATATGACGGCTTGAATGCAA TCCTTAAGAAATATCACCCATCACATTACAACCTGTACAATCTTTCTGTT GACATCTCGCACCAAGATCCTGACATGTTAAACCACGAATGGAATGAGCG CATCCTGACAGAGTTGTACATCACTTTTCTTCTGCTGCTTTCCATAACAA GTTTGCAGCCTCGCACAGGTTGTAAAGAATATTTGATGTATGTCTTATAC AATATAAGCATCTTTTGGAGAGAGAATCGTCTGAGTAGAAGCCAACAAAA CACAGGAGCAGGATCAACTATTTTTCAGGGAACTGAAGAAGAAGCTTTCG TCAAAATTCTTGAATATTACAAGTCCTTGGCTGTCTATTTCTTTGGTGAA AAAGAATGGCTATTACAAACACCTGATGCTTCAGGTTACACAGACCCTCT TCCTGATTTCTTCCATCACAAGCAGGATCCTTACATGTCCTTCTTGAATC AGGAACTTTCTAAATCCTTCGATTCAGATATGATGACACCTGATGATCTT GAAAAATGTTGGCTCACTGGAAGCTTGGATGAAGAGATGTTTCAGATGAC GTCATCAAAAGAAGAATTGCTCAAGAAGCAATATGTTGAAAAATTCGATG AAAACCTCAAAAAGAAACGCCTTCGTAAAAGCAAAATCCTTTCCTTTGGA AATGCTGAAGGATGCAGAAAGGTGCATGACAAAGTTTCGAAATATCCTTT CTACCAGCAGGATGCAGACTTTCAACTATTGGTGAATCAATTGAACATCA ACTGGCAACGAAATCTTCGTCAACGGCTTTCGAAGGAGAAAGAAATTCAG GAGAAAGATGATAGCAATGAAGAACCTCTTTTCAATCTAAGCCAAAAATA TCCGCATAGTTTCCTCATAAAATGTCTTTTACCGCAAATGTGTCAGATGT ATAACTATGGATTCACCAGCAATAAATTCGATTTTCCGACACCAGCTAAA TATCTCTCTTTTATTATGCAATTCCACACGAATGCGATGGAGTATGATTA TCAAACTCGCCAAGCGTCTAAAGAAGAGTCCAAGCGTCTACAAAAATGGG GTTATTGCGTTCCCGAGGATGACGGCGTGGTTTTACGTACTTACGATAAA CGCTTGCATAACACCTTTCTGCATTCGTATGACTCAGTAATTTGAGCAAC AGACATTGAAGAAGTTACTTTAAGGACGATTTCACGCCTGGATACATTAA GAACCTTTTGATACCATACGCACGTTTTTTAATTGATAAGAAAATTTTTT GATATAAAAGAAAATAATTATATTAATATGATACAATATTATTTGTATTT AGATCACGTACTGTAAATTGGTGCACTGAAAAAGGGAGGTCCGATTATTA AACCCTATTTCGCCATTCGCCCGTCAAAATGAGAGCATAAATTTCTTGAG GTTTGAGTTTTCGTTTCCG

Coding sequence (CDS) from alignment at scaffold_124:227339..230807-

>TCONS_00047298 ID=TCONS_00047298|Name=TCONS_00047298|organism=Clytia hemisphaerica|type=CDS|length=7614bp|location=Sequence derived from alignment at scaffold_124:227339..230807- (Clytia hemisphaerica)
AGGCTACCATTTATCTGGTCCCCAAAGCACATCCTGACAGTGATGATTGT
TGGATTGAATGGAGATTATCATTTTCAATGGTGGAGAAAGAAATCATGCT
TAACTTGCCCCACTTGTACCGGAAAGTCTATCTCATCTGCAAGGAGATGG
CGAATGATTTGAAAGTCAAGAATGTGTATTACTCATACGCTTTGAAAACC
ACTTTCTTGTGGCAATGTGAGGCGTGGTCCAAAACAGGCATTGTATACAC
ATTAGACCACATCTTAGATATGGTACAGGACGTCTTTCAGCGTCTTTACA
AAGCTCATGAAACGAAAGACCTCCAAAATTACTTTGTTCCCGGTATGAAC
TTATTTGAACTGATCTCAGATTCGAAGAAGGAATCTGTAGCCTTGAAAAG
GAAGTTTTATTGGTACCAACTGGGCCACGACGGAGACGATAGCACCTTAC
AGAATGATGTATTAGTGAAAGCAGACAAACATCTATTGAACTTACTGAAG
ATATACACAGAGAAGAAATCCCTCATTACGAAAATCTTACAAAAATTCCA
AGTACCTTTCTTTCCCATTGTTTACCAACAACTTGTAACATCAATTAAAG
ATGACCTTGATATTCAACGTGGTGTAGTCATGTGGGACCATCAACCAGAA
TATGACGGCTTGAATGCAATCCTTAAGAAATATCACCCATCACATTACAA
CCTGTACAATCTTTCTGTTGACATCTCGCACCAAGATCCTGACATGTTAA
ACCACGAATGGAATGAGCGCATCCTGACAGAGTTGTACATCACTTTTCTT
CTGCTGCTTTCCATAACAAGTTTGCAGCCTCGCACAGGTTGTAAAGAATA
TTTGATGTATGTCTTATACAATATAAGCATCTTTTGGAGAGAGAATCGTC
TGAGTAGAAGCCAACAAAACACAGGAGCAGGATCAACTATTTTTCAGGGA
ACTGAAGAAGAAGCTTTCGTCAAAATTCTTGAATATTACAAGTCCTTGGC
TGTCTATTTCTTTGGTGAAAAAGAATGGCTATTACAAACACCTGATGCTT
CAGGTTACACAGACCCTCTTCCTGATTTCTTCCATCACAAGCAGGATCCT
TACATGTCCTTCTTGAATCAGGAACTTTCTAAATCCTTCGATTCAGATAT
GATGACACCTGATGATCTTGAAAAATGTTGGCTCACTGGAAGCTTGGATG
AAGAGATGTTTCAGATGACGTCATCAAAAGAAGAATTGCTCAAGAAGCAA
TATGTTGAAAAATTCGATGAAAACCTCAAAAAGAAACGCCTTCGTAAAAG
CAAAATCCTTTCCTTTGGAAATGCTGAAGGATGCAGAAAGGTGCATGACA
AAGTTTCGAAATATCCTTTCTACCAGCAGGATGCAGACTTTCAACTATTG
GTGAATCAATTGAACATCAACTGGCAACGAAATCTTCGTCAACGGCTTTC
GAAGGAGAAAGAAATTCAGGAGAAAGATGATAGCAATGAAGAACCTCTTT
TCAATCTAAGCCAAAAATATCCGCATAGTTTCCTCATAAAATGTCTTTTA
CCGCAAATGTGTCAGATGTATAACTATGGATTCACCAGCAATAAATTCGA
TTTTCCGACACCAGCTAAATATCTCTCTTTTATTATGCAATTCCACACGA
ATGCGATGGAGTATGATTATCAAACTCGCCAAGCGTCTAAAGAAGAGTCC
AAGCGTCTACAAAAATGGGGTTATTGCGTTCCCGAGGATGACGGCGTGGT
TTTACGTACTTACGATAAACGCTTGCATAACACCTTTCTGCATTCGTATG
ACTCAGTAATTTGACTTTCAGAACGTAAGGAAGTTTCAGCAGTTTTAACC
ACCAACCAAAACGCTGAAGATGATAAGGATGACGATTCACTTGGTGAAGA
TAGGGTCATTGCTTTACCTTTGAAAAAATGGCCTCGACCTGCTTGGAAGT
CATTTAGCGAAAGAAAGCCTGTTTATTTGCAAAGCATAATGGATAAATTA
GAAGATGACAGAAACAATTTCTGATTTTATGTTGGAATGTGAACTAGACG
GAATCCCCAAACTTCTTTCATTAGAAGATCTTTTATTAGATGAATGTGAT
GAGTATAAAAGATGTTTGCTGTCGACGAAGTTGAAGGATCAACAGCTCCA
AAAAATGGTCAAATTCATCTTGAAGACGCGCTCTTACCAAGCTTGCTTTT
TCCAAGATGAGAACACTGATAGCCTCGATCTCATTAAAACGAAAGCTCCT
ATCAGTTATTTGATGTTCCCCATAGCAACGAAAGCTATCAAAACAGGGAG
CCGTTCAGAACAAGTCTTCTTGCAAGACTCTGATGTTGATTACATTTATG
AGATTGGTCCTCTGCTGGTGGACGATATTAGCCTACTGAATGAAACCATA
AAATCGCGAAAGCATAGCCTATGGTACAAAGAAACAAAGAATGCTGGGTT
TTACACCGTCATAGATGACGAGGGTGGACATATAACAGCAGTTGCAATGC
AAGCTAAAATTGATTCGTCCGCAAAGTCAATAAAGTTGAGGCTACCATTT
ATCTGGTCCCCAAAGCACATCCTGACAGTGATGATTGTTGGATTGAATGG
AGATTATCATTTTCAATGGTGGAGAAAGAAATCATGCTTAACTTGCCCCA
CTTGTACCGGAAAGTCTATCTCATCTGCAAGGAGATGGCGAATGATTTGA
AAGTCAAGAATGTGTATTACTCATACGCTTTGAAAACCACTTTCTTGTGG
CAATGTGAGGCGTGGTCCAAAACAGGCATTGTATACACATTAGACCACAT
CTTAGATATGGTACAGGACGTCTTTCAGCGTCTTTACAAAGCTCATGAAA
CGAAAGACCTCCAAAATTACTTTGTTCCCGGTATGAACTTATTTGAACTG
ATCTCAGATTCGAAGAAGGAATCTGTAGCCTTGAAAAGGAAGTTTTATTG
GTACCAACTGGGCCACGACGGAGACGATAGCACCTTACAGAATGATGTAT
TAGTGAAAGCAGACAAACATCTATTGAACTTACTGAAGATATACACAGAG
AAGAAATCCCTCATTACGAAAATCTTACAAAAATTCCAAGTACCTTTCTT
TCCCATTGTTTACCAACAACTTGTAACATCAATTAAAGATGACCTTGATA
TTCAACGTGGTGTAGTCATGTGGGACCATCAACCAGAATATGACGGCTTG
AATGCAATCCTTAAGAAATATCACCCATCACATTACAACCTGTACAATCT
TTCTGTTGACATCTCGCACCAAGATCCTGACATGTTAAACCACGAATGGA
ATGAGCGCATCCTGACAGAGTTGTACATCACTTTTCTTCTGCTGCTTTCC
ATAACAAGTTTGCAGCCTCGCACAGGTTGTAAAGAATATTTGATGTATGT
CTTATACAATATAAGCATCTTTTGGAGAGAGAATCGTCTGAGTAGAAGCC
AACAAAACACAGGAGCAGGATCAACTATTTTTCAGGGAACTGAAGAAGAA
GCTTTCGTCAAAATTCTTGAATATTACAAGTCCTTGGCTGTCTATTTCTT
TGGTGAAAAAGAATGGCTATTACAAACACCTGATGCTTCAGGTTACACAG
ACCCTCTTCCTGATTTCTTCCATCACAAGCAGGATCCTTACATGTCCTTC
TTGAATCAGGAACTTTCTAAATCCTTCGATTCAGATATGATGACACCTGA
TGATCTTGAAAAATGTTGGCTCACTGGAAGCTTGGATGAAGAGATGTTTC
AGATGACGTCATCAAAAGAAGAATTGCTCAAGAAGCAATATGTTGAAAAA
TTCGATGAAAACCTCAAAAAGAAACGCCTTCGTAAAAGCAAAATCCTTTC
CTTTGGAAATGCTGAAGGATGCAGAAAGGTGCATGACAAAGTTTCGAAAT
ATCCTTTCTACCAGCAGGATGCAGACTTTCAACTATTGGTGAATCAATTG
AACATCAACTGGCAACGAAATCTTCGTCAACGGCTTTCGAAGGAGAAAGA
AATTCAGGAGAAAGATGATAGCAATGAAGAACCTCTTTTCAATCTAAGCC
AAAAATATCCGCATAGTTTCCTCATAAAATGTCTTTTACCGCAAATGTGT
CAGATGTATAACTATGGATTCACCAGCAATAAATTCGATTTTCCGACACC
AGCTAAATATCTCTCTTTTATTATGCAATTCCACACGAATGCGATGGAGT
ATGATTATCAAACTCGCCAAGCGTCTAAAGAAGAGTCCAAGCGTCTACAA
AAATGGGGTTATTGCGTTCCCGAGGATGACGGCGTGGTTTTACGTACTTA
CGATAAACGCTTGCATAACACCTTTCTGCATTCGTATGACTCAGTAATTT
GACTTTCAGAACGTAAGGAAGTTTCAGCAGTTTTAACCACCAACCAAAAC
GCTGAAGATGATAAGGATGACGATTCACTTGGTGAAGATAGGGTCATTGC
TTTACCTTTGAAAAAATGGCCTCGACCTGCTTGGAAGTCATTTAGCGAAA
GAAAGCCTGTTTATTTGCAAAGCATAATGGATAAATTAGAAGATGACAGA
AACAATTTCTGATTTTATGTTGGAATGTGAACTAGACGGAATCCCCAAAC
TTCTTTCATTAGAAGATCTTTTATTAGATGAATGTGATGAGTATAAAAGA
TGTTTGCTGTCGACGAAGTTGAAGGATCAACAGCTCCAAAAAATGGTCAA
ATTCATCTTGAAGACGCGCTCTTACCAAGCTTGCTTTTTCCAAGATGAGA
ACACTGATAGCCTCGATCTCATTAAAACGAAAGCTCCTATCAGTTATTTG
ATGTTCCCCATAGCAACGAAAGCTATCAAAACAGGGAGCCGTTCAGAACA
AGTCTTCTTGCAAGACTCTGATGTTGATTACATTTATGAGATTGGTCCTC
TGCTGGTGGACGATATTAGCCTACTGAATGAAACCATAAAATCGCGAAAG
CATAGCCTATGGTACAAAGAAACAAAGAATGCTGGGTTTTACACCGTCAT
AGATGACGAGGGTGGACATATAACAGCAGTTGCAATGCAAGCTAAAATTG
ATTCGTCCGCAAAGTCAATAAAGTTGAGGCTACCATTTATCTGGTCCCCA
AAGCACATCCTGACAGTGATGATTGTTGGATTGAATGGAGATTATCATTT
TCAATGGTGGAGAAAGAAATCATGCTTAACTTGCCCCACTTGTACCGGAA
AGTCTATCTCATCTGCAAGGAGATGGCGAATGATTTGAAAGTCAAGAATG
TGTATTACTCATACGCTTTGAAAACCACTTTCTTGTGGCAATGTGAGGCG
TGGTCCAAAACAGGCATTGTATACACATTAGACCACATCTTAGATATGGT
ACAGGACGTCTTTCAGCGTCTTTACAAAGCTCATGAAACGAAAGACCTCC
AAAATTACTTTGTTCCCGGTATGAACTTATTTGAACTGATCTCAGATTCG
AAGAAGGAATCTGTAGCCTTGAAAAGGAAGTTTTATTGGTACCAACTGGG
CCACGACGGAGACGATAGCACCTTACAGAATGATGTATTAGTGAAAGCAG
ACAAACATCTATTGAACTTACTGAAGATATACACAGAGAAGAAATCCCTC
ATTACGAAAATCTTACAAAAATTCCAAGTACCTTTCTTTCCCATTGTTTA
CCAACAACTTGTAACATCAATTAAAGATGACCTTGATATTCAACGTGGTG
TAGTCATGTGGGACCATCAACCAGAATATGACGGCTTGAATGCAATCCTT
AAGAAATATCACCCATCACATTACAACCTGTACAATCTTTCTGTTGACAT
CTCGCACCAAGATCCTGACATGTTAAACCACGAATGGAATGAGCGCATCC
TGACAGAGTTGTACATCACTTTTCTTCTGCTGCTTTCCATAACAAGTTTG
CAGCCTCGCACAGGTTGTAAAGAATATTTGATGTATGTCTTATACAATAT
AAGCATCTTTTGGAGAGAGAATCGTCTGAGTAGAAGCCAACAAAACACAG
GAGCAGGATCAACTATTTTTCAGGGAACTGAAGAAGAAGCTTTCGTCAAA
ATTCTTGAATATTACAAGTCCTTGGCTGTCTATTTCTTTGGTGAAAAAGA
ATGGCTATTACAAACACCTGATGCTTCAGGTTACACAGACCCTCTTCCTG
ATTTCTTCCATCACAAGCAGGATCCTTACATGTCCTTCTTGAATCAGGAA
CTTTCTAAATCCTTCGATTCAGATATGATGACACCTGATGATCTTGAAAA
ATGTTGGCTCACTGGAAGCTTGGATGAAGAGATGTTTCAGATGACGTCAT
CAAAAGAAGAATTGCTCAAGAAGCAATATGTTGAAAAATTCGATGAAAAC
CTCAAAAAGAAACGCCTTCGTAAAAGCAAAATCCTTTCCTTTGGAAATGC
TGAAGGATGCAGAAAGGTGCATGACAAAGTTTCGAAATATCCTTTCTACC
AGCAGGATGCAGACTTTCAACTATTGGTGAATCAATTGAACATCAACTGG
CAACGAAATCTTCGTCAACGGCTTTCGAAGGAGAAAGAAATTCAGGAGAA
AGATGATAGCAATGAAGAACCTCTTTTCAATCTAAGCCAAAAATATCCGC
ATAGTTTCCTCATAAAATGTCTTTTACCGCAAATGTGTCAGATGTATAAC
TATGGATTCACCAGCAATAAATTCGATTTTCCGACACCAGCTAAATATCT
CTCTTTTATTATGCAATTCCACACGAATGCGATGGAGTATGATTATCAAA
CTCGCCAAGCGTCTAAAGAAGAGTCCAAGCGTCTACAAAAATGGGGTTAT
TGCGTTCCCGAGGATGACGGCGTGGTTTTACGTACTTACGATAAACGCTT
GCATAACACCTTTCTGCATTCGTATGACTCAGTAATTTGACTTTCAGAAC
GTAAGGAAGTTTCAGCAGTTTTAACCACCAACCAAAACGCTGAAGATGAT
AAGGATGACGATTCACTTGGTGAAGATAGGGTCATTGCTTTACCTTTGAA
AAAATGGCCTCGACCTGCTTGGAAGTCATTTAGCGAAAGAAAGCCTGTTT
ATTTGCAAAGCATAATGGATAAATTAGAAGATGACAGAAACAATTTCTGA
TTTTATGTTGGAATGTGAACTAGACGGAATCCCCAAACTTCTTTCATTAG
AAGATCTTTTATTAGATGAATGTGATGAGTATAAAAGATGTTTGCTGTCG
ACGAAGTTGAAGGATCAACAGCTCCAAAAAATGGTCAAATTCATCTTGAA
GACGCGCTCTTACCAAGCTTGCTTTTTCCAAGATGAGAACACTGATAGCC
TCGATCTCATTAAAACGAAAGCTCCTATCAGTTATTTGATGTTCCCCATA
GCAACGAAAGCTATCAAAACAGGGAGCCGTTCAGAACAAGTCTTCTTGCA
AGACTCTGATGTTGATTACATTTATGAGATTGGTCCTCTGCTGGTGGACG
ATATTAGCCTACTGAATGAAACCATAAAATCGCGAAAGCATAGCCTATGG
TACAAAGAAACAAAGAATGCTGGGTTTTACACCGTCATAGATGACGAGGG
TGGACATATAACAGCAGTTGCAATGCAAGCTAAAATTGATTCGTCCGCAA
AGTCAATAAAGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030128XLOC_030128Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047298-proteinTCONS_00047298-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047298-exon-scaffold_124-1575043694:230244..230807TCONS_00047298-exon-scaffold_124-1575043694:230244..230807Clytia hemisphaericaexon
TCONS_00047298-exon-scaffold_124-1575043694:229863..230052TCONS_00047298-exon-scaffold_124-1575043694:229863..230052Clytia hemisphaericaexon
TCONS_00047298-exon-scaffold_124-1575043694:227339..229426TCONS_00047298-exon-scaffold_124-1575043694:227339..229426Clytia hemisphaericaexon
TCONS_00047298-exon-scaffold_124-1510915933:230244..230807TCONS_00047298-exon-scaffold_124-1510915933:230244..230807Clytia hemisphaericaexon
TCONS_00047298-exon-scaffold_124-1510915933:229863..230052TCONS_00047298-exon-scaffold_124-1510915933:229863..230052Clytia hemisphaericaexon
TCONS_00047298-exon-scaffold_124-1510915933:227339..229426TCONS_00047298-exon-scaffold_124-1510915933:227339..229426Clytia hemisphaericaexon
TCONS_00047298-exon-scaffold_124-1491911889:230244..230807TCONS_00047298-exon-scaffold_124-1491911889:230244..230807Clytia hemisphaericaexon
TCONS_00047298-exon-scaffold_124-1491911889:229863..230052TCONS_00047298-exon-scaffold_124-1491911889:229863..230052Clytia hemisphaericaexon
TCONS_00047298-exon-scaffold_124-1491911889:227339..229426TCONS_00047298-exon-scaffold_124-1491911889:227339..229426Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_124supercontigscaffold_124:227339..230807 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.07804 1.35485 1.55974 1.34596 1.7444 1.26358 1.93572 2.33164 1.13879 1.94486 1.6624 1.63844 1.96687 2.53829 9.00303 9.37894 1.85564 2.20368 4.8361 5.42301 2.18606 2.08138 2.66324 3.37009 5.36715 4.22196 45.2819 35.1517 8.89208 7.77566
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR024810Mab-21_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047298 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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