TCONS_00047251 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047251
Unique NameTCONS_00047251
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2765

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047251 ID=TCONS_00047251|Name=TCONS_00047251|organism=Clytia hemisphaerica|type=transcript|length=2765bp
CAGCAAAACCCTTTAACTGATACCACTACTGAAATACAAACAATCACTAC
AGATGGAGTTCATTTATTGTGTAAAAACGTTTTGATACACCTAAATGATA
AAGTGCAGGAAAGTTTTGCTAATCTTGAAAATGTGATTGGAGTAATATCA
GGGTTAGACCTTGATCCAGTTTTGGATGATTTCTCAGACAATATTTTAAT
GAATGGCAATAGTACAAGATATAATTCGAATTGCATTGTGGTTCAAGGCA
TTATACCAAACAGTCCGGCCGGAGAAAGTGAAATTAACATAGgGGACATT
ATATTGGCGATAAATGGTATCAAGGTCAATCTTCAAAGTGTCAATTCAAT
TGTTGAAAAGATTAACGGCACTCAAGAGATTGTGTTGACCATCGAGAGGT
TAGCCACGGTTGTGGAACCGGAAAAACCAAGTGAATTATGTTCCATCGTT
TCGAACACATTGGATGAAGGTGCAAAAGAAGATGTATTCCATGCATACCA
TGACACATGTATGGTTTCTCTGTTGACATTAAACTCAAATGAAGATGATG
TGGATGGTGACATTTTGTTTTGGTACCCAGACAGTGAGAAATCAAAGATT
CTTCGAAATACACGTGGTATATTCTTAACATTGAGCGACATGCTGACTGA
TGTAATGGCTGAACATATACAAAGCTCTGTGCTATACACCAATAAGGAAA
CAATAAACGTTGCTTACAAAAAGTGTGGTGGAAACGTTTTAGTTGTCGCA
GCACCAGATCACAAGTGTGATTTGAATACACTGATATCATGCACTGATGA
CTTTGCAAAACTCTTGACTATTTTGAACGGAGACCTGAATAGagCATTTA
CAGATGAGAATATGGAATCAACAAGACATGAAACCTCACTATTCCttgat
cttcttcttcaaaGAAAACCAGTGGTACCTTTTGGTACAGTTCGACAACT
GCAATTACCAACTAAACAAATGATCGAGATCAGCAATGTTGTTTCGGATG
TGGAGGCAGCTGATTACGGAGAATGTGTCGATGATTTCTTCCCTCACCAA
CGATTATATGGCACAATCGGAACCTGCTTGTTTTATAAGgaTAATCTTGT
TTGCTCACATTTGACGGATGAGAATTTACAAGACGTCGTCACCTTTTGTA
AATATCATTGGCTTTTCATGTTGGCCAAGTCAGAGAAAATGAAACAACTT
GTGTTATGGAAAGAGATATTCTTGACAGAGAAAAGTGGAGAGAGCCCGGC
TACGAAGAACAGTTACGAAACTCCCGAGAATGCAAGATGGTTCATTTTGG
TCGTCGGCCAGGGACATAGTTTGTTTTGCACTCTTCTTGAGACTGGTGGT
GCTGCTTCCATACCTGAAGGAAACCCTGGTCCTCATCCTTACTATGTAGA
CACAGCATGGTCCATCTTGACGTATCTGATTGAAAATATGGATTACGAGA
CATCTTCACATTCAAGATTGGAAGGTCCGTCCATACCAGCAGTAGTTCAT
GCTACAGAAGCTATCAATCCTAAAACGTCAGCCAGCCCACGTGCTATCGA
ActgatcaaaagaaaagtacCTATCCAGAGACGTCCGCACCATGATCATC
TCTCGATTTCACATTCTATAAGTAATGAAAGTGATCTTGGTATGCGAGAA
CGTTCACAATCGAGGACGTCGAATTTATCAGGGAACAGCAGTAACCGTCA
TTACTCTGTCCATGAAATGGCTCCACATTTCAAACAACTCAGTATGGCTT
CCACATCTGAGGTGTCAACAACTGCTGCACTCGCCACCAAGTTGCCGACC
GGTTCACATAACACTTTATTTTACTTCACCGTCTTATCCAATCGAAACGG
TGTGTTTGTCTCTCCCAACGCATTCAAAAGCTCAAATATGTTGACTGGTG
AAATTCTGACCAATTACACTTCTGCGTGTGAAAAGATTCATAAATGGTTT
GAAAAGAAACAGTTGCTGCCATCGGAACCCTTGGAACTTGGTGTTCTCTT
TCATCTTCAATTAACGAAAGGTGCCGAGATGAAAAAAGGATTTCCCAATA
TTCGATATTGGGTCGTAGGACGTAAGATGAAGAAACGAAACAAATGTGAA
GAAGTTTACGTGTGTTTTCAAGATGGTACTCCTCAAAATGTCATCGAAAT
GGCTTTCAAAATACGATTTGGATGCCATTATTGAGTCAAATATGTCTTGG
TTGAAATTCTCTCGAGTCTTCAGTTCTTCGCTTACTGAATCCGCCATTCA
AGATTAGGaaaattttaatggtttttgttaaaaatgaaaatatattttct
tggTGTGTTATGTCTTGTAATATAAGTTTGTGACTATAATTTTGTGATAC
TGTGTAAATATGTTTTTGAATACTGcaaactattttttgaaaaattttgg
gctttttaaattgaagaaattttaacatcatatttttttaattattttta
agtCGTGAATGAATTGTAAATATTAACTAAATTTTGGGTTGGGTCGGGTG
TTGCCTGATGTTGTATGGCCCCcacgaaattttgattttgtcgTTGGTAC
AAAAAACTTTGATTCAGAGACTCTTTTGATGAAGTTATTATAACTTGAAG
TAAATTTTTAGAATTCCGAGTTTCGTCTAAAGGCCGAATGACCCGTTGAT
AAATCGATTgtatagattttattttatatcttaGTTATTTATGCTTTTAG
TTTTCTTTTGGATATAAAACGAAATCATCATTGTATATAGCTGACCAAAA
GCATGGTAAATcaac
Run BLAST on NCBI

transcript from alignment at scaffold_123:499375..510332-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047251 ID=TCONS_00047251|Name=TCONS_00047251|organism=Clytia hemisphaerica|type=transcript|length=10958bp|location=Sequence derived from alignment at scaffold_123:499375..510332- (Clytia hemisphaerica)
CAGCAAAACCCTTTAACTGATACCACTACTGAAATACAAACAATCACTAC
AGATGGAGTTCATTTATTGTGTAAAAACGTTTTGATACACCTAAATGATA
AAGTGCAGGAAAGTTTTGCTAATCTTGAAAATGTGATTGGAGTAATATCA
GGGTTAGACCTTGATCCAGTTTTGGATGATTTCTCAGACAATATTTTAAT
GAATGGCAATAGTACAAGATATAATTCGAATTGCATTGTGGTTCAAGGCA
TTATACCAAACAGTCCGGCCGGAGAAAGTGAAATTAACATAGGTAACAGC
AATTGGAATGATTTGTTTATCTTAGCTGTCATTTTGTTTATTTTATACCA
CAATTAACAACCCCGTTTTGAGTGAACTGTTTATGCTAGATAGCCCTCAA
TCACATTAAAAGTACCTCCAGGAATAGTAACTGTGCCACTTATAAGGAAA
CTTGTATTTTTTTCAAGAGGCTACAGTGATTTTTTTAAGGCTCTACCTAG
ATTACCATCCTGTTAGTTCTCTTATTATAAGAAAAATTTGCACCACAGTT
AATGAAAAAAAGTTCTTGGTTCTTTTAAAGTGTTTTGTTTTTGGCCAAAG
TTATGTTTACATTTTCTTTTCTTTTTACAGGGGACATTATATTGGCGATA
AATGGTATCAAGGTCAATCTTCAAAGTGTCAATTCAATTGTTGAAAAGAT
TAACGGCACTCAAGAGGTTTGTACTAATAAGAAAAATTGCTCCATAGTTT
TTAAATGAAAATATGGTAAGAATTGAACTTAAAGGAATAACAGTAAACAA
AATCATTTCCATACACTACTAATGGGTTATAATTAGAATGTAGTTGATTT
ATTTCGATACCAATACTACTTTTTAAGTTTTGCCACTGATTTTGCCACTG
ATTTCAATTTATATCCATTCTAATATTTTCATGAATTATTTTAGATTGTG
TTGACCATCGAGAGGTTAGCCACGGTTGTGGAACCGGAAAAACCAAGTGA
ATTATGTTCCATCGTTTCGAACACATTGGATGAAGGTGCAAAAGAAGATG
TATTCCATGCATACCATGACACATGTATGGTTTCTCTGTTGACATTAAAC
TCAAATGAAGATGATGTGGATGGTGTAAGCTAAAACTTTACTATATTATT
GTTCCTAATCTTTGCATAATAGATATAACTAAAAGCCTTTTTGACCCTTA
TTTATCAATAACTCAACTACGATGGCATTGTACCGTGTATCAGTTTTCTA
TTAGAATATAACACCCCTGGGTACATGGGTCACACTGCTTTCTTGTATGT
CCAGTCTGTCTAATCCAATCATAGCGTGATGCCTTAATTGTGGCCCTAAA
AGATTTGAACTATACCATTTTAACAAAATCAAGGTAGCATTACCATTCTT
CAATCACCATGCATTAAAAGCTTATTTATCAGAGTTTTGCTTCGTTTTTT
TAGGACATTTTGTTTTGGTACCCAGACAGTGAGAAATCAAAGATTCTTCG
AAATACACGTGGTATATTCTTAACATTGAGCGACATGCTGACTGATGTAA
TGGCTGAACATATACAAAGGTAAGAAACTGTTCGACTAACGTTTCCAGAT
CAGCTAAGAAAAGAACAACAAATAACTTTTAAAGAACGACAAAAAGAACG
TCAAATGATAAAAAGTTAACGATAAAGAACGACATATTTTGTCATCCCAT
CCCCCAGCCTTATTTAACGACTAGTGGTTTAAAGAATGATGAATTACACA
TGTGTCTGTTTTGATTTAAAGACTTTCCTTCCTCGTTTTCTTTAGCTCTG
TGCTATACACCAATAAGGAAACAATAAACGTTGCTTACAAAAAGTGTGGT
GGAAACGTTTTAGTTGTCGCAGCACCAGATCACAAGTAAGCTTTTTTCTT
TGTAGTAATAGTGTCAATGGAAAATTTCAAAGTACTCAATTAGAGTTGAA
AAAACAGTATTCTCAACTTCAGTTGAGCTACAATCTGACAATGTCTGTCT
GTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGT
CTGTTACAAAAACTTTAGGGCAGCCTGGAGACTTCAAAAATGCTTGGATT
TGGCTGAAATTTGGCACACTTGTTCCTCCTTGGGTGAATATCTGGGGGTG
TTTTTTTCATTTTTTGAAAATTATGATTTTTGAGGCATGGGAACGAGTTT
TTCGCCAAAACGAGGCTAAAAGTTTGGGGAAACCTCGAGACTTCAAAAAT
TGTTGGATTTGGCTGAAATTTGGTACACTTGTACCTTGGGTTAATATTCT
GAGGGTAATTTTTTCATTTTTCAAAAATTTTCATTTTTGGGGCCTGGGGA
CGAGTTTTTTGCAAAAACGAGGCTAAAACTTTGGAGCAGCGTACAGGCCT
CCAAAATTGTCGGATTTGGCTGAAATTTGGCACACTTGTTCATTGGGTGA
ATATCTGGGGATCTACAATTGGGCCTATGAATAATTTGAAGCCACTGAAG
TTGAGCCCAGTGCGTTGCGCACGTTCGACTATTTTTAACAGAGTGATTGC
AGAAAGCATATTCTTTGAAAAAATATTCTGTTAAATATACAATTTCCTTC
TTTCAGGTGTGATTTGAATACACTGATATCATGCACTGATGACTTTGCAA
AACTCTTGACTATTTTGAACGGAGACCTGAATAGGTAATACCACTAAATA
GTAGCTAATATAGTATTTTTCCCCAATTTTCCTTTTGTCTTATACTCATT
ATTATAAGAATAGTTTAAAGAAACACTAAGTTAATGCGCCTTAGACTAGT
AAACTAGTCGGTTATTACTTATAATAAAACTGTCAATCAAATAATGTAAA
CACTACTTAAATATTCAGCACGCGTGAGAGAAAAGGAAAATAACCGACTA
GAAGCTTCTTCCAACGCCTTTTTTTCTTCACCTAAAATCGTAAGGAGAGA
CATATACAGATTTCTGTATGTCTGACCCGTGCGGGATTGCATTTATTTTT
CTTTCTGTTTATTGCATTTTTGGGAATGCTCATTTATTTATATGTTCCCA
TGTTTAATGTTACTATGAAATGTCATTTAGTCAAAAAAGTTGGATGGATT
CTCAAAAACCTAAAAAAGGTTGTAAAATTAAACAACTTTTTTTTTTTGAG
GGAAGAAGCTTCTAGTCGTTGAAATTCAGAAAAGACACGCAACCTCACCT
CTTCGATTCTTTTTATTTGGAGCTTGAATTTTTTGTATATGGGTCTGTTT
TCAACGACCAGTTTACTAGTCTAATGCGCCTTAGTCTATTACATTCATCT
TTAACAATAAGAAGTGGTTATTATCAAGAAAATGTAACCTTACAATCAAG
GTCATAATATTTGAGAAAAAAGGGAAATCCACCGGGAAGTTTTTGAACCA
CAATCGATTTGTAATTACTCTAAAGTAGGTTGGAAGGGTAGAGTTTTAAC
TCTGAGTTTTAACATGAGACTTAAGACTTGACTTAAGACTTGACTTAAGA
CTTAAGATCTGAGGATCCAAAAGTTCAAAAATAGTCCAATAAGACTCAGA
ATATAGCCTGGAAGTCTGCCAACCCCTCCCAAATTGAAATATTCGATTAA
ATTAAAAAGATAGCCAAAAATCGTCTTTCTCGCCAGAACTTTAAATCTTG
AAAAACGTTAAAATAACCAAAATTCTCAATATATTAGTATATGTAATCAC
ATGATAACGAGTGCAATTCGAATATAATTGCACGAGTGATTTTTTTGTTA
TTAATTTCGTCCGAAAGGACGAGGAAAATTCGAAACAAAAAAATCACTAG
TGCAATTTTCGAATTGTACGAGTTATTATGTGATTATGAGCTAATCGCAC
AATGGATTTCATTACTTTTTCCCAGTTAGGAAAGTAAATTACAGAAATTA
CACTGAGAGTTTTATATTTTTCTCTTCTCTTTATGTCTTTCTTTTATTGT
TGTTTATTGATTTTCTTTCTCACAAAATAAATTTCGAATGCAATTTAAAC
GTTCGATGCTGTTAGCTCTGCTAGCGGATATCAACACACATTGAGCATCA
TTATGCGCAAGATTGTGGATATAGCTATCAGCTCCATGAAGGAATGAGTA
GTATATAGGAGCTCATAGAATAAAGACAGAAGAAAACCGTTCACACAAAT
TCTTAGATTTATCGCACCCCCAGAACAACACTTTGTTAGCTCACAAGGCT
AACAAATGGAGGTTCTACCGAGATCTTAAAGGATTTGGTATTTGCTGTGT
TGTTCTGGGGATTCGAGATTTAGCTTGAGAGCTATAAAGATAAACAAAAC
AGTGAAACATTTGCATGGAATATTTGAGATGTTTTATGATTGAAATAGTC
AAATTATACATCGAGTTGATATGGCTATTCGAAGTTTCTTGGCATTGGTT
CATTGACATTGTTTATGTTATTGATATGATTTATTGAAGTCGTAACGTCC
AGAACATGACGCTAAACTGATCCCGGGCTCCCTTGAGCAAGGTCAGTACC
CGGAAGCTTCCCATGTCAGGGTTACGATGAAGAAATTGTATTGTTATACA
CGTCCTGAATCCTGAAAGTATGTCTTTAAACTTGTCCTGAGAGATACACA
AGAACATTATTGAATAACTATGGTTAAAAATGTCCTGAGAGACATAATTT
GATGGTCAAAGATATCTGAAGTGAAGAAAGGCATGGTTTTACTGAGAAAA
CAGAATAACATAACGAAACATTATGAAGAAGCTGCCCATGGTTACATCGC
AGTAAAAACGATTGCATCGACATAGGAATGCTAAGTTAATCCATGGTTGT
AAGACGCAACGCAGTAATAGTTTTCCGAGATAGTTATGCGTTATCAGATT
CCTAAGAAGTAAGGTGAAACATGCATTTAATTCAACAAAAGACATTTAAC
CTATGGTCAGGAAACCATAGCATCGAAATTTGATGTGATGCTGTTCTAAA
AATCGGGGAAAATCAAAAAGGGCATGATAAAGAAATTCTTATATCGTCAA
AAGAACGTGAAAGAAACAGTATCTACCATCTATGCAGCAAAGGAGTTAAA
TGGCATATTATAAATCATCAACAAACAGAAGAAATAAGCCAAAACAAAGC
AACAAGCAATGCAGCATATGAGCCAAACAAGCAATAAACAAATGAAATTA
CCACAATATACCCAAGATGGGGTAAACACAAGCTATGAGAAAAAACCTCA
ACAAAGGTTAAAAAACAAAGCAATTGTTTTTAAACAAACAGACATTTTCA
AATCGACCATTCAATCATACAGAAGTTATGTATAGTAAAATAGTGATTAG
AAGAATCTTCTGACAAAGATGACGAAGATGAAGAATACTTGAGTCGCCAA
ACATGAGATACTGTGTATTAGATAATATTGCCATGGACAATAAAAGATAG
AAAATTAACCAAGAAACTAGCTACCCTCCATCGCATTGAAAATTGATGCC
CATTCTATCCGAAGATCAAGTGTTTCTGACACTGATGATTTAATTAACAA
TTTGAATTATTGAAACATTATCAATGGTAAAAAGACGTATAATACATTAA
AAAGAAAACACAGAAAACAAAATTGTAGTATTTTATTATTTGATTAAAAG
TGCATATTTTATTTCTAGGAAACATTGAACCATTAGGGAACCAGTAAAAA
AAAAAAATTATTTAATATTTATTTTAGAGAATTTTATTAGGAGTAAATGT
GGAACATTTTTTTTTTCCAACGGGGTTGTTAGCTCTGCTAGCGGATATCA
ACACACATTGAGCATCATTATGCGCAAGATTGTGGATATAGCTATCAGCT
CCATGAAGGAATGAGTAGTATATAGGAGCTCATAGAATAAAGACAGAAGA
AAACCGTTCACACAAATTCTTAGATTTATCGCACCCCCAGAACAACACTT
TGTTAGCTCACAAGGCTAACAGATGCAAAAAAAATGTAAGAAAAAACATT
AAAATCAATTTTGTAAACATTGGCGCGGCATTGGAGAGTGTGATTAACGA
TTAATTGCTCTCTACAGGATGCAATTAACGATTAATTGCTCTCTTTGAGG
GCGTGCCAAATAAGAAAAAATAACCCATCGTGCGATTATGACCTTAATTG
TAGGCGAAAATTAAAAAATGTAGTGTTTATCATTGAAATAGAACTTCAAA
GATAACTGTTATGTACAAACAGTATGAATACTAATGTATCAACTACTAAC
AAACAAAACTTGATTTACAAGCGAAAATATCTAACCAAACGATGTTTGAT
AGCTCAATGAACCATATAGATGAACCCATAGTCTGCGGCCGGGTCAGAAA
AAAAATGTTTTACCCGGCCGGTTTCTGGAAACACTGCATTTTTTTATTTT
CGCCTTACTATTTTTGTTTTGATTTTCAGAGCATTTACAGATGAGAATAT
GGAATCAACAAGACATGAAACCTCACTATTCCTTGATCTTCTTCTTCAAA
GAAAACCAGTGGTACCTTTTGGTACAGTTCGACAACTGCAATTACCAACT
AAACAAATGGTAAACTTATTATAGTATTACTGAAAATGAAATGGAATAGG
GAAGGGCTTATGATTTTGATGGTGCTCTGTATTAGCTGATATTTTGCTTT
GCGAAAAAAGTGTCAGAATTTCAGTCACAATCAGGCTTTTAAGGAGTTTT
TACTGACGGTGTTTTTGAAAAATGTTGGTATTTTGGTGTTGGCGACCATC
TTACGCCACCTAGTTTCTATCTTTATTATATGTTTCAGTGTCGCGTTTTG
CAACATTATGCATTTCTATGTTTTGTTTACAGATCGAGATCAGCAATGTT
GTTTCGGATGTGGAGGCAGCTGATTACGGAGAATGTGTAAGTGGTCTTCA
TCTGATACAAACTAACATTTATGTTGTTCTTTACTGAACTCAATAAATCT
TTTGTATTTTACAATGGATGTTCTAACTTCAGTTGAGCCAGAATCTGAAA
ATATCTGTCTCTCTGTCTGTCTGTCAGTTTGTCGTAAGGACTGATGGATA
AACAGGCTGGAGACATCAAAAAAGGTCGGATTTGGTTGAAGTTTGGCACA
AATTGTTTCTTGGTGTTGTTTCATTTTTAAAAAAAGTTTTAAAATTTTTG
GGCATGGTGAGTATAACAATTGACAGATTCCACAGATTTTGAATTTTCAA
TTTTTGTATTTATGTATTATAGGGAATAAAGATTGTAGGGAGATATGATA
ATTTTATGTTCCTGATTCGTTACAGGTCGATGATTTCTTCCCTCACCAAC
GATTATATGGCACAATCGGAACCTGCTTGTTTTATAAGGTCAGTGATCTG
TCTTGAAATTGTAAGGTCTAGCGGATTACCTACAAACTATTGAATCAAGG
CTTTCGATTCAATTGATAAAAGTCAACATTTTTAATGTCCCATCAATAGC
GAAAGTGCATTTCATTGTTTTCATTAAATACCTTTTTCAATTTTAGGATA
ATCTTGTTTGCTCACATTTGACGGATGAGAATTTACAAGACGTCGTCACC
TTTTGTAAATATCATTGGCTTTTCATGTTGGCCAAGTCAGAGAAAATGAA
ACAACTTGTGTTATGGAAAGAGGTGAGCTGAGAAATAATTTTTTATGTCG
AGAAATGTGTGAGATATAGGAAGCAAAACAATAGTACTAAAGGTACAATG
CGATTCTTGCTCGAAGAGTAAAAAGTTAGCTCTAACAGTAATTTATGCAA
AAGTTTTTAAAGTCACATAGGCTGATCAATTTCGTCCCCACCTTTAATTT
TCCGTAAGATTTCTTTCTCATCAATAAAAGTGTGAGATAATGGGAAGGAA
AAAATGTACACGTTTCATTCTAACCTTTGTTTTCCCTTCATAGATATTCT
TGACAGAGAAAAGTGGAGAGAGCCCGGCTACGAAGAACAGTTACGAAACT
CCCGAGAATGCAAGATGGTTCATTTTGGTCGTCGGCCAGGTAACGTCGTT
TTCAAATCGTTTTTGGGATTTTCTACTTTTTAAAAACACCATATAATTTA
AGGTATGAGATCTTGTTTTCATGCTCTTAAATTTCTCTTGGATATTTTTA
TAAACAGTTCTTTTCTAATACCTTGAACGATCACACTTACCGACGGATTG
GTTTGTATATTCAAAACTACTTCTTTTTATAGGGACATAGTTTGTTTTGC
ACTCTTCTTGAGACTGGTGGTGCTGCTTCCATGTAAGAATTTTACTGTCT
GTTTTTCTAGAAGACAAAAAGTTTTTTTATGTCTTTTTAATGTCAAACTT
ATTTCAGGTATTGTGGTCAAAAATAAAAAAGAATTACCTCTACAAAATAA
GCTCCTGCTTGCTGCTCGTCAAAATTATTATCTTTTAGTTCCATTGAAGA
TATTGTTTTTATGATACAGAAAAGAGACTCGCTTCTTGTTCCGATAAAGC
AGAAATTTTTGTAAGCATATGGTGGCAAATATATTCAATTATATCCTTAA
ATGTATGCCTTCCTTTCACTATATTTCAGACCTGAAGGAAACCCTGGTCC
TCATCCTTACTATGTAGACACAGCATGGTCCATCTTGACGTATCTGATTG
AAAATATGGATTACGAGACATCTTCACATTCAAGGTAAACATCCATTATT
TAGTGGTCACATGGGTACATTGTCACTTTGAACCAATTATAAACTTTCTT
CAGAACTAAACTAGTTTTTTGTTGAAGAGAACTAGTTCGATTTTACACAG
GGTGTCCAAGAAAAACTTAAATGTAAGATGATATGATTATGTTGATTAAT
ATAAATTGTGTTCGTCATCTTATTGACGTGTAAATCTTTTCATAATTATT
TTATTAAATTACCCTTCGTTTAAAATTTAGATTGGAAGGTCCGTCCATAC
CAGCAGTAGTTCATGCTACAGAAGCTATCAATCCTAAAACGTCAGCCAGC
CCACGTGCTATCGAACTGATCAAAAGAAAAGTACCTATCCAGAGACGTCC
GCACCATGATCATCTCTCGATTTCACATTCTATAAGTAATGAAAGTGATC
TTGGTATGCGAGAACGTTCACAATCGAGGACGTCGAATTTATCAGGGAAC
AGCAGTAACCGTCATTACTCTGTCCATGAAATGGCTCCACATTTCAAACA
ACTCAGTATGGCTTCCACATCTGAGGTGTCAACAACTGCTGCACTCGCCA
CCAAGTAAGATTTAATTACTTGTGGTTTTTCTCTCGGATTTCTGTCTCTC
CCATCTTGTCTTTCAATCGCAGCTGATAAAATTAATTCGATTCATTTATG
ATTAAATTTCAGAATACATAAGTGTGTTACTTAAATCTTATTTAGTTTAA
GCATTCTTTATACATAGTCTATAANACTCGCCACCAAGTAAGATTTAATT
ACTTGTGGTTTTGTCTTTTAATCGCAGCTGATAAAATTAATTCGATTCAT
TTATGATTAAATTTCAGAATACATAAGTGTGTTACTTAAATCTTATTTAG
TTTAAGCATTCTTTATACATAGTCTATAAGTATGTTACAGTAGTATTACT
CGAAAAATTCACATCCGAGGCTTGAAGGATTTGCAATGGTAAATTTCATG
GTATTTCACTTTATCTTAGGTTGCCGACCGGTTCACATAACACTTTATTT
TACTTCACCGTCTTATCCAATCGAAACGGTGTGTTTGTCTCTCCCAACGC
ATTCAAAAGCTCAAATATGTTGACTGGTGAAATTCTGACCAATTACACTT
CTGCGTGTGAAAAGATTCATAAATGGTTTGAAAAGAAACAGGTAAGTTAA
ACCTTCACTTTCTTTTATCAACGTCAATCTTATTTTATATACAGTTGTAC
TATAATACAATTGAATTTCTAACTTATTTTCGTTGTATTTTTTAGTTGCT
GCCATCGGAACCCTTGGAACTTGGTGTTCTCTTTCATCTTCAATTAACGA
AAGGTGCCGAGATGAAAAAAGGATTTCCCAATATTCGATATTGGGTCGTA
GGGTAAGTTTCAATGATTTCTGAAAACCTTTTCATTAAAGATTGTAAAAT
CTGCTTTAGTTGTAACCTTCCTTCATCTGATGTTATCATGCCTGGTTTCA
AATACAGTTGGCGCTCTCTAATTCGATTTTCAAGGGAATTGGATTTTCAT
GGAATAAGGGACTGTATTGAAAAGTTTCTTGATGATGGCGACAAAGTTAT
TGAATAATTGAGAATAGTTGAGGGTATCGAACATTTTGCATGCCTGAAAA
TCCTGAAGAATCATTGTATTGTGGATATATAGCATTTTCCCTAATCATCA
TTTCTTTTTCAGACGTAAGATGAAGAAACGAAACAAATGTGAAGAAGTTT
ACGTGTGTTTTCAAGATGGTACTCCTCAAAATGTCATCGAAATGGCTTTC
AAAATACGATTTGGATGCCATTATTGAGTCAAATATGTCTTGGTTGAAAT
TCTCTCGAGTCTTCAGTTCTTCGCTTACTGAATCCGCCATTCAAGATTAG
GAAAATTTTAATGGTTTTTGTTAAAAATGAAAATATATTTTCTTGGTGTG
TTATGTCTTGTAATATAAGTTTGTGACTATAATTTTGTGATACTGTGTAA
ATATGTTTTTGAATACTGCAAACTATTTTTTGAAAAATTTTGGGCTTTTT
AAATTGAAGAAATTTTAACATCATATTTTTTTAATTATTTTTAAGTCGTG
AATGAATTGTAAATATTAACTAAATTTTGGGTTGGGTCGGGTGTTGCCTG
ATGTTGTATGGCCCCCACGAAATTTTGATTTTGTCGTTGGTACAAAAAAC
TTTGATTCAGAGACTCTTTTGATGAAGTTATTATAACTTGAAGTAAATTT
TTAGAATTCCGAGTTTCGTCTAAAGGCCGAATGACCCGTTGATAAATCGA
TTGTATAGATTTTATTTTATATCTTAGTTATTTATGCTTTTAGTTTTCTT
TTGGATATAAAACGAAATCATCATTGTATATAGCTGACCAAAAGCATGGT
AAATCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030096XLOC_030096Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047251-exon-scaffold_123-1575043694:510041..510332TCONS_00047251-exon-scaffold_123-1575043694:510041..510332Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1575043694:509617..509702TCONS_00047251-exon-scaffold_123-1575043694:509617..509702Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1575043694:509209..509388TCONS_00047251-exon-scaffold_123-1575043694:509209..509388Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1575043694:508764..508879TCONS_00047251-exon-scaffold_123-1575043694:508764..508879Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1575043694:508448..508537TCONS_00047251-exon-scaffold_123-1575043694:508448..508537Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1575043694:507649..507726TCONS_00047251-exon-scaffold_123-1575043694:507649..507726Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1575043694:503824..503953TCONS_00047251-exon-scaffold_123-1575043694:503824..503953Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1575043694:503497..503550TCONS_00047251-exon-scaffold_123-1575043694:503497..503550Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1575043694:503045..503107TCONS_00047251-exon-scaffold_123-1575043694:503045..503107Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1575043694:502761..502886TCONS_00047251-exon-scaffold_123-1575043694:502761..502886Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1575043694:502394..502489TCONS_00047251-exon-scaffold_123-1575043694:502394..502489Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1575043694:502151..502200TCONS_00047251-exon-scaffold_123-1575043694:502151..502200Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1575043694:501749..501853TCONS_00047251-exon-scaffold_123-1575043694:501749..501853Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1575043694:501179..501502TCONS_00047251-exon-scaffold_123-1575043694:501179..501502Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1575043694:500592..500763TCONS_00047251-exon-scaffold_123-1575043694:500592..500763Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1575043694:500381..500487TCONS_00047251-exon-scaffold_123-1575043694:500381..500487Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1575043694:499375..500070TCONS_00047251-exon-scaffold_123-1575043694:499375..500070Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1510915933:510041..510332TCONS_00047251-exon-scaffold_123-1510915933:510041..510332Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1510915933:509617..509702TCONS_00047251-exon-scaffold_123-1510915933:509617..509702Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1510915933:509209..509388TCONS_00047251-exon-scaffold_123-1510915933:509209..509388Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1510915933:508764..508879TCONS_00047251-exon-scaffold_123-1510915933:508764..508879Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1510915933:508448..508537TCONS_00047251-exon-scaffold_123-1510915933:508448..508537Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1510915933:507649..507726TCONS_00047251-exon-scaffold_123-1510915933:507649..507726Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1510915933:503824..503953TCONS_00047251-exon-scaffold_123-1510915933:503824..503953Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1510915933:503497..503550TCONS_00047251-exon-scaffold_123-1510915933:503497..503550Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1510915933:503045..503107TCONS_00047251-exon-scaffold_123-1510915933:503045..503107Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1510915933:502761..502886TCONS_00047251-exon-scaffold_123-1510915933:502761..502886Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1510915933:502394..502489TCONS_00047251-exon-scaffold_123-1510915933:502394..502489Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1510915933:502151..502200TCONS_00047251-exon-scaffold_123-1510915933:502151..502200Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1510915933:501749..501853TCONS_00047251-exon-scaffold_123-1510915933:501749..501853Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1510915933:501179..501502TCONS_00047251-exon-scaffold_123-1510915933:501179..501502Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1510915933:500592..500763TCONS_00047251-exon-scaffold_123-1510915933:500592..500763Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1510915933:500381..500487TCONS_00047251-exon-scaffold_123-1510915933:500381..500487Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1510915933:499375..500070TCONS_00047251-exon-scaffold_123-1510915933:499375..500070Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1491911889:510041..510332TCONS_00047251-exon-scaffold_123-1491911889:510041..510332Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1491911889:509617..509702TCONS_00047251-exon-scaffold_123-1491911889:509617..509702Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1491911889:509209..509388TCONS_00047251-exon-scaffold_123-1491911889:509209..509388Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1491911889:508764..508879TCONS_00047251-exon-scaffold_123-1491911889:508764..508879Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1491911889:508448..508537TCONS_00047251-exon-scaffold_123-1491911889:508448..508537Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1491911889:507649..507726TCONS_00047251-exon-scaffold_123-1491911889:507649..507726Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1491911889:503824..503953TCONS_00047251-exon-scaffold_123-1491911889:503824..503953Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1491911889:503497..503550TCONS_00047251-exon-scaffold_123-1491911889:503497..503550Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1491911889:503045..503107TCONS_00047251-exon-scaffold_123-1491911889:503045..503107Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1491911889:502761..502886TCONS_00047251-exon-scaffold_123-1491911889:502761..502886Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1491911889:502394..502489TCONS_00047251-exon-scaffold_123-1491911889:502394..502489Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1491911889:502151..502200TCONS_00047251-exon-scaffold_123-1491911889:502151..502200Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1491911889:501749..501853TCONS_00047251-exon-scaffold_123-1491911889:501749..501853Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1491911889:501179..501502TCONS_00047251-exon-scaffold_123-1491911889:501179..501502Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1491911889:500592..500763TCONS_00047251-exon-scaffold_123-1491911889:500592..500763Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1491911889:500381..500487TCONS_00047251-exon-scaffold_123-1491911889:500381..500487Clytia hemisphaericaexon
TCONS_00047251-exon-scaffold_123-1491911889:499375..500070TCONS_00047251-exon-scaffold_123-1491911889:499375..500070Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_123supercontigscaffold_123:499375..510332 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.49936e-10	7.80934e-05	0	0.0562988	0	0	0	0	4.40228	7.044	1.31546	2.92921	13.2895	6.25303	3.00856	2.92501	0.728281	5.78204	0	2.61432	0	3.11978e-08	0	0	11.2559	2.50161	0	0	0	0
Blast
[Close]
BLAST of TCONS_00047251 vs. Swiss-Prot (Human)
Match: INTU (Protein inturned OS=Homo sapiens GN=INTU PE=1 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 4.639e-58
Identity = 140/431 (32.48%), Postives = 220/431 (51.04%), Query Frame = 1 
Query:  235 IVVQGIIPNSPAGES-EINIGDIILAINGIKVNLQSVNSIVEKINGTQEIVLTIERLATVVEPEKPSELCSIVSNTLD----------EGAKEDVFHAYHDTCMVSLLTLNSNEDDVDGDILFWYPDSEKSKILRNTRGIFLTLSDMLTDVMAEHIQSSVLYTNKETINVAYKKCGGNVLVVAAPDHKCDLNTLISCTDDFAKLLTILNGDLNRAFTD-ENMESTRHETSLFLDLLLQRKPVVPFGT-------------------VRQLQLPTKQMIEISNVVSDVEAADYGECVDDFFPHQRLYGTIGTCLFYKDNLVCSHLTDENLQDVVTFCKYHWLFMLAKSEKMKQLVLWKEIFLTEKSGESPATKNSYET-PE-NARWFILVVGQGHSLFCTLLETGGAASIPEGNPGPHPYYVDTAWSILTYL 1428
            +VV G++P   A +S ++ IGD+++A+N + V  +++  ++  I G  ++ LT E    V             SNT D          EG ++   +  H   M   L L+S     + +IL+ YP SE S+ L++ RGIFLTL DML +V    + SS L  N + I+VAY K    +L++  P  +  L  L +  ++  + L  + G L+ AF   EN+    H  +LF    LQ   +    +                   VR L LP +  +E+   +SD+EAAD+ E  +D++  +RLY  +G+ LFYK  L+CSHL  ++L D+  +C+++ L  LA  +++ QL++W+E+F   +    P   +S E  PE   R+F+LVVG  H + C LLE GG AS   G+PGP   YVD   + L  L
Sbjct:  208 LVVHGLLPGGSAMKSGQVLIGDVLVAVNDVDVTTENIERVLSCIPGPMQVKLTFENAYDVKRETSHPRQKKTQSNTSDLVKLLWGEEVEGIQQSGLNTPH-IIMYLTLQLDSETSKEEQEILYHYPMSEASQKLKSVRGIFLTLCDMLENVTGTQVTSSSLLLNGKQIHVAYWKESDKLLLIGLPAEEVPLPRLRNMIENVIQTLKFMYGSLDSAFCQIENVPRLDHFFNLFFQRALQPAKLHSSASPSAQQYDASSAVLLDNLPGVRWLTLPLEIKMELDMALSDLEAADFAELSEDYYDMRRLYTILGSSLFYKGYLICSHLPKDDLIDIAVYCRHYCLLPLAAKQRIGQLIIWREVF--PQHHLRPLADSSTEVFPEPEGRYFLLVVGLKHYMLCVLLEAGGCASKAIGSPGPDCVYVDQVKTTLHQL 635
The following BLAST results are available for this feature:
BLAST of TCONS_00047251 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
INTU4.639e-5832.48Protein inturned OS=Homo sapiens GN=INTU PE=1 SV=2[more]
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