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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046966 ID=TCONS_00046966|Name=TCONS_00046966|organism=Clytia hemisphaerica|type=transcript|length=1266bp
aaaaatgataaattttacatccatcgtgtcttaaatttaagggaaaacaa
aTATGTTCAAAGTTGctcccccctattaccactgggcttaataatttgat
tttaactacacctacgttttgggggcccccaaacctgcgttttgacaacc
agggatactataaaaaattttgtcaaactAATTTATGCCAAAAACCCTCT
Atatcacatttccaaactatggtcaaaattgtgtatttatattttaaaga
taTCTCCAGAAATcgttaaaattgcaaacctccgttttggagGCCGTTAG
AAAGAAACTACCTATCTTTAAACGATTGAAAAATATCGttgaaattgatt
gaaattttgaaaaagaacttccgggaaataaagtagagatgttataGTTT
TTTATGCAGCAAATatctttgtaaaacctcttttcctctagatttgtgag
aaattttaaatttgatcgacgtttttggGGCCGCATACTGTatacttctt
ttctttttcctcgcccattatttttaagaatttgaaaatcaaccCTGGAA
ATATTCTTACTCTTAAATTACTCTTAATTCTGCTTGATTGGTTAATCGTG
ACCATTGACATTGCTAGCCACATACTCTCATTTGGTGAACATCTTCGCAT
TGATCAGAACCAGAAGCCATTGTTATCTTCAACatgaaagtaaaataaaa
ttcGTTTAAAAGCGTTGTTTGGGATAAAGAAAGAGGCCCATTTCTGAAAG
GCGAATATACAAGTACAGTAGGAGAATTTAGCATGATAAGATTTTAGGAG
CGATTTATGAATGCGAAGAAGAAGCTTTTTTCATTAAAGTGGGAACTTAG
GCTGCATTATTGCTAAATTAGTTTTCATATGAATAAGTATCTATTATCAC
TTccggaaaaaaaatcaaaaagtttatgAATTTTCTCAGAATTTTGGTTG
caggtcaaaaatattttctgcgACTTTACAGTATCACGTACTTCTTTTTT
GTTCGTTGGTGGTACAGTGAGTGGATAAGAAAATACATTGCCCCGAATTA
GGATCGTATTACATTTCTCatttgaacatctaaattttgttaggCCTTGA
AGAGCAACTCGGCAATATTAAGTCTGAGAAGGTTATTGGTCTTAATacaa
tttaaaagtcaaaaaaagaacACATTTATTTTACgcaaaagaattatttt
ttgaaatatgaaataatGTGAATTTGGTCCTATGAAGACTTAAGAGTCTA
TAATTTTAGTATGAAT Run BLAST on NCBI transcript from alignment at scaffold_119:58377..59642+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046966 ID=TCONS_00046966|Name=TCONS_00046966|organism=Clytia hemisphaerica|type=transcript|length=1266bp|location=Sequence derived from alignment at scaffold_119:58377..59642+ (Clytia hemisphaerica)
aaaaatgataaattttacatccatcgtgtcttaaatttaagggaaaacaa
aTATGTTCAAAGTTGctcccccctattaccactgggcttaataatttgat
tttaactacacctacgttttgggggcccccaaacctgcgttttgacaacc
agggatactataaaaaattttgtcaaactAATTTATGCCAAAAACCCTCT
Atatcacatttccaaactatggtcaaaattgtgtatttatattttaaaga
taTCTCCAGAAATcgttaaaattgcaaacctccgttttggagGCCGTTAG
AAAGAAACTACCTATCTTTAAACGATTGAAAAATATCGttgaaattgatt
gaaattttgaaaaagaacttccgggaaataaagtagagatgttataGTTT
TTTATGCAGCAAATatctttgtaaaacctcttttcctctagatttgtgag
aaattttaaatttgatcgacgtttttggGGCCGCATACTGTatacttctt
ttctttttcctcgcccattatttttaagaatttgaaaatcaaccCTGGAA
ATATTCTTACTCTTAAATTACTCTTAATTCTGCTTGATTGGTTAATCGTG
ACCATTGACATTGCTAGCCACATACTCTCATTTGGTGAACATCTTCGCAT
TGATCAGAACCAGAAGCCATTGTTATCTTCAACatgaaagtaaaataaaa
ttcGTTTAAAAGCGTTGTTTGGGATAAAGAAAGAGGCCCATTTCTGAAAG
GCGAATATACAAGTACAGTAGGAGAATTTAGCATGATAAGATTTTAGGAG
CGATTTATGAATGCGAAGAAGAAGCTTTTTTCATTAAAGTGGGAACTTAG
GCTGCATTATTGCTAAATTAGTTTTCATATGAATAAGTATCTATTATCAC
TTccggaaaaaaaatcaaaaagtttatgAATTTTCTCAGAATTTTGGTTG
caggtcaaaaatattttctgcgACTTTACAGTATCACGTACTTCTTTTTT
GTTCGTTGGTGGTACAGTGAGTGGATAAGAAAATACATTGCCCCGAATTA
GGATCGTATTACATTTCTCatttgaacatctaaattttgttaggCCTTGA
AGAGCAACTCGGCAATATTAAGTCTGAGAAGGTTATTGGTCTTAATacaa
tttaaaagtcaaaaaaagaacACATTTATTTTACgcaaaagaattatttt
ttgaaatatgaaataatGTGAATTTGGTCCTATGAAGACTTAAGAGTCTA
TAATTTTAGTATGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046966-exon-scaffold_119-1491911889:58377..59642 | TCONS_00046966-exon-scaffold_119-1491911889:58377..59642 | Clytia hemisphaerica | exon |
| TCONS_00046966-exon-scaffold_119-1510915933:58377..59642 | TCONS_00046966-exon-scaffold_119-1510915933:58377..59642 | Clytia hemisphaerica | exon |
| TCONS_00046966-exon-scaffold_119-1575043694:58377..59642 | TCONS_00046966-exon-scaffold_119-1575043694:58377..59642 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_119 | supercontig | scaffold_119:58377..59642 + |
Blast
The following BLAST results are available for this feature:
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