TCONS_00046952 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046952
Unique NameTCONS_00046952
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length142

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046952 ID=TCONS_00046952|Name=TCONS_00046952|organism=Clytia hemisphaerica|type=transcript|length=142bp
GTAACCGTCGCCAATTCGTTCAGATTGACGACAAAAAATCTGACTACGGA
ACTGTATCGTTtggggtacctcaaggctcTATACTTGGACCAATTCTATT
CAACCTTTATACCGTCGACCTACAAGATAACGTCGATAGTGG
Run BLAST on NCBI

transcript from alignment at scaffold_118:211404..211545

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046952 ID=TCONS_00046952|Name=TCONS_00046952|organism=Clytia hemisphaerica|type=transcript|length=142bp|location=Sequence derived from alignment at scaffold_118:211404..211545 (Clytia hemisphaerica)
CCACTATCGACGTTATCTTGTAGGTCGACGGTATAAAGGTTGAATAGAAT
TGGTCCAAGTATAgagccttgaggtaccccaAACGATACAGTTCCGTAGT
CAGATTTTTTGTCGTCAATCTGAACGAATTGGCGACGGTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029954XLOC_029954Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046952-exon-scaffold_118-1491911889:211404..211545TCONS_00046952-exon-scaffold_118-1491911889:211404..211545Clytia hemisphaericaexon
TCONS_00046952-exon-scaffold_118-1510915933:211404..211545TCONS_00046952-exon-scaffold_118-1510915933:211404..211545Clytia hemisphaericaexon
TCONS_00046952-exon-scaffold_118-1575043694:211404..211545TCONS_00046952-exon-scaffold_118-1575043694:211404..211545Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_118supercontigscaffold_118:211404..211545 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046952 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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