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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046944 ID=TCONS_00046944|Name=TCONS_00046944|organism=Clytia hemisphaerica|type=transcript|length=1058bp
ctgcaaattatattgaaacATCGACTTTAAAACCTGTAACAAACCCTGCT
CGTGAATATCTTTTAtagatttcatattttcatgcATTTTTATGGAGTTT
TTTGGACCCATCATTTTATACACGTACTTATCATTTTGTACTTTGAATGA
GTATGCATGACAGTGTGCATATTCTTAGACTCAGATATTCGTGCAAGGCG
CTCAATATCATTGTTGTGGCGCTTTATTGTTGGGAAAATGATGCTCCTTT
GTGGTAGAAGAATTTACTAACATCTAAGAGACATCAGCAGATGATACTTG
CTTCATCATATCTATTTGTTCATAAAGTAATTCCAAACATATTTGGATGT
CGGCCGTATTGGTAtactgtttttgtttgtttttttgctacatattttaa
aaattctatattacaaaaataaggaaaaaagctttaaatagGAGACTCCA
AGCCGACATCTCATCTCCAACATTCACAATTTTATCATACAACCAACATT
TAAAAATCAGTCTGGTTTAATGGTGGTGTTTTGAAATCCGTGACTTCTTC
TTGTTCTTGTGTTTCCTTGAAAACATTGAAAGTCTTATTAACGACGATCT
ACGGTCGAGGTCCGAAGAACAACATTGAGTAGGACAGCCCACATCACAGG
AAGCAGGTGTACAATTAGATTCGCAGGCTGTTGGCGGGGATAGCGggggt
ggtggtggtggtggaggtggaGGAGGAGGAGGGGCTATTGCTGCAGCACA
TGGGGTACAAGGTGGTGGAGGAGGTGGACAGGATGCAGCCATAcatggtg
gtggtggtggcggACAAGAAGGTTGGCAGGGTGGAGGTGCCATTGCTGCA
GCACATGGTGTGCAAGGAGGTAGTGGTGGTGGACAAGGTGCAGCCATACA
GGGTGGGGGAGGTGGTGGGCAGGAAGGTTGACATGCTGGCATGGCTGGTG
CAGCACATGGAGTGCAAGGTGGTGGTACAGCACATGGTGGAGCCATACAA
GGTGGCGGTGGTGGCGGACAGACTGGTTGACAAACTGGGGGTGGTGGGGG
TGGTGGGG Run BLAST on NCBI transcript from alignment at scaffold_118:3305..4362 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046944 ID=TCONS_00046944|Name=TCONS_00046944|organism=Clytia hemisphaerica|type=transcript|length=1058bp|location=Sequence derived from alignment at scaffold_118:3305..4362 (Clytia hemisphaerica)
CCCCACCACCCCCACCACCCCCAGTTTGTCAACCAGTCTGTCCGCCACCA
CCGCCACCTTGTATGGCTCCACCATGTGCTGTACCACCACCTTGCACTCC
ATGTGCTGCACCAGCCATGCCAGCATGTCAACCTTCCTGCCCACCACCTC
CCCCACCCTGTATGGCTGCACCTTGTCCACCACCACTACCTCCTTGCACA
CCATGTGCTGCAGCAATGGCACCTCCACCCTGCCAACCTTCTTGTccgcc
accaccaccaccatgTATGGCTGCATCCTGTCCACCTCCTCCACCACCTT
GTACCCCATGTGCTGCAGCAATAGCCCCTCCTCCTCCtccacctccacca
ccaccaccaccccCGCTATCCCCGCCAACAGCCTGCGAATCTAATTGTAC
ACCTGCTTCCTGTGATGTGGGCTGTCCTACTCAATGTTGTTCTTCGGACC
TCGACCGTAGATCGTCGTTAATAAGACTTTCAATGTTTTCAAGGAAACAC
AAGAACAAGAAGAAGTCACGGATTTCAAAACACCACCATTAAACCAGACT
GATTTTTAAATGTTGGTTGTATGATAAAATTGTGAATGTTGGAGATGAGA
TGTCGGCTTGGAGTCTCctatttaaagcttttttccttatttttgtaata
tagaatttttaaaatatgtagcaaaaaaacaaacaaaaacagtaTACCAA
TACGGCCGACATCCAAATATGTTTGGAATTACTTTATGAACAAATAGATA
TGATGAAGCAAGTATCATCTGCTGATGTCTCTTAGATGTTAGTAAATTCT
TCTACCACAAAGGAGCATCATTTTCCCAACAATAAAGCGCCACAACAATG
ATATTGAGCGCCTTGCACGAATATCTGAGTCTAAGAATATGCACACTGTC
ATGCATACTCATTCAAAGTACAAAATGATAAGTACGTGTATAAAATGATG
GGTCCAAAAAACTCCATAAAAATgcatgaaaatatgaaatctaTAAAAGA
TATTCACGAGCAGGGTTTGTTACAGGTTTTAAAGTCGATgtttcaatata
atttgcag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046944-exon-scaffold_118-1491911889:3305..4362 | TCONS_00046944-exon-scaffold_118-1491911889:3305..4362 | Clytia hemisphaerica | exon |
| TCONS_00046944-exon-scaffold_118-1510915933:3305..4362 | TCONS_00046944-exon-scaffold_118-1510915933:3305..4362 | Clytia hemisphaerica | exon |
| TCONS_00046944-exon-scaffold_118-1575043694:3305..4362 | TCONS_00046944-exon-scaffold_118-1575043694:3305..4362 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_118 | supercontig | scaffold_118:3305..4362 . |
Blast
The following BLAST results are available for this feature:
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