TCONS_00046926 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046926
Unique NameTCONS_00046926
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1915

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046926 ID=TCONS_00046926|Name=TCONS_00046926|organism=Clytia hemisphaerica|type=transcript|length=1915bp
TTAAGGTTTACTTTTTATGTGGGTGTTAGAGTGTCCTTTCCCAATATGGT
TTTGTGCTATCTTCAAATCGCTTCCTTTATTTTGGCTATTATTTTCGTTC
AAACAAAAGatagaaaataaagattttataatGGCACAACCTCCAAGCTA
CGAAGCGTCACAAAATCCTGGATACCAAGCACCTCTATACCAACCTCAGG
ATGGTGCCTACCCACCTCAGAATGGTGCCTACCCTCCTCAGAATGGTGCT
TACCCTCCTCCTAATACAGGGATGGCTTATCCACCACCAACGCAAGGCTA
CCAACCAGTACCAGCAGACCAACAGCAACCTTATGTTTACCCCGGAAAGC
AAGAACCAGGCGTAGATGTAGAGTACCAAGGACATTCGGACGACAGTGAT
AAACAGACAATGGGAATCATTTCATTTGATGACAAAAGTATTCGGCTAAG
TTTCATCAGAAAGGTTTTTAGCATCTTGATTTTGCAAATGTCAGTCACCT
TGGCATTTATTGCTTGGTTCATCTTTCATGAACCAACGAAAGTGTTTGTC
CAGAATCATGTTGGAATGTACATTGCCGGATAtgttattttcTTGGTCCT
GTATTTCGTGTTGGTGTGCTGCACAAGTGTGGCTCGACGACATCCAATCA
ATTTGgttttgcttgccattttcACCATCAGTCTTTCTTACATGGTTGCT
GTCATCTCAAGCTTTCACGATACTAAAATTGTATTGGCTTTGTTTGGAAT
GACATTGTTGATCAGTGTTGGCATTATTGGATTTGCATCCCAAACAAAGT
ATGACTTCACCAAGTGGGCTGGTGTTTTGTTTGTCTGTTGTTTCGCTTTG
TTCATTTTTGGATTATTTGCCGCCATCTTGATCCCAACTGGTGCTATGCA
GggtgtaCGAATGGTGTATGCTGGACTTGGCGCGCTCCTCTTCATGGCTt
tCTTGGCATTTGACACTCAATTGATCATGGGAGGTAAGAAGTACGAGATC
AGTCCTGAGGATTACGTCTTTGCCGCCATGATGCTTTATGTGGACATAAT
CTACATCTTTTTGTATCTGTTGGCTTTGTTCGGTGGAAACAACTAACAAG
TTCCGTCGCCAACCACATTCTGTCAATCTCTTGGATTGAGCAAAgtcaaa
ttgaatttttcaacatcaaaatttatatgATGTtcatatttgatatttta
aaattgCTATATCAATTATATCATCTCAATCTATTTGGTTCAGTTTTCCA
AGTGAAGGCTTCGAACTTTTTGTATACATCAAATCAACTTGCTTTATCAT
ACTCGATTAGCAGGTCAAATCTTCGACTTAGGATACTATATGTAAATTTT
CATTTctattttttcccaaatttttatttttgtgatgatcatgtcatttt
ctttttcttcagaaGTTTATTCAGATTAATTATGTGTGATTATTATATTC
ATGACACATTGTAGAAAATAGTTGTATGTAAATAACTACGCATGTTTGAA
ATAACAAAGTCGATTGGATGGCTTTTTCACTCATCTAATGAACTTTGTTA
TGACATTACATAATGAAAAGAGGAGcatatactttaatcggattaaattt
cgcgaaaatggcgaaaGTTAATCAGATTAAAGTacgtttggaaaaaaata
caaaataaagtttttgctTGGACAATTTTAATAATAGTGATTACCGTTCG
AACGAGCACTCAATTCAATGTAATGatagggggtttttattaattttata
attttggtAGGCGCAAACAGCGTCCCAAACACATCATATTACGTTTCTTT
TTGTAACCTAATAAGATCTTTTTGTATgataaagttttattttctaCTAA
TTGAAATAATAAAACTCTTCTTGTTTGAAATGAATGTGTCTTTTGTTCGG
AAAATATAATTTGAA
Run BLAST on NCBI

protein sequence of TCONS_00046926-protein

>TCONS_00046926-protein ID=TCONS_00046926-protein|Name=TCONS_00046926-protein|organism=Clytia hemisphaerica|type=polypeptide|length=359bp
MWVLECPFPIWFCAIFKSLPLFWLLFSFKQKIENKDFIMAQPPSYEASQN
PGYQAPLYQPQDGAYPPQNGAYPPQNGAYPPPNTGMAYPPPTQGYQPVPA
DQQQPYVYPGKQEPGVDVEYQGHSDDSDKQTMGIISFDDKSIRLSFIRKV
FSILILQMSVTLAFIAWFIFHEPTKVFVQNHVGMYIAGYVIFLVLYFVLV
CCTSVARRHPINLVLLAIFTISLSYMVAVISSFHDTKIVLALFGMTLLIS
VGIIGFASQTKYDFTKWAGVLFVCCFALFIFGLFAAILIPTGAMQGVRMV
YAGLGALLFMAFLAFDTQLIMGGKKYEISPEDYVFAAMMLYVDIIYIFLY
LLALFGGNN
Run BLAST on NCBI

transcript from alignment at scaffold_118:191675..196143-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046926 ID=TCONS_00046926|Name=TCONS_00046926|organism=Clytia hemisphaerica|type=transcript|length=4469bp|location=Sequence derived from alignment at scaffold_118:191675..196143- (Clytia hemisphaerica)
TTAAGGTTTACTTTTTATGTGGGTGTTAGAGTGTCCTTTCCCAATATGGT
TTTGTGCTATCTTCAAATCGCTTCCTTTATTTTGGCTATTATTTTCGTTC
AAACAAAAGATAGAAAATAAAGATTTTATAATGGCACAACCTCCAAGCTA
CGAAGCGTCACAAAATCCTGGATACCAAGCACCTCTATACCAACCTCAGG
ATGGTGCCTACCCACCTCAGAATGGTGCCTACCCTCCTCAGAATGGTGCT
TACCCTCCTCCTAATACAGGGATGGCTTATCCACCACCAACGCAAGGCTA
CCAACCAGTACCAGCAGACCAACAGCAACCTTATGTTTACCCCGGAAAGC
AAGAACCAGGCGTAGATGTAGAGTACCAAGGACATTCGGACGACAGTGAT
AAACAGACAATGGGAATCATTTCATTTGATGACAAAAGTATTCGGCTAAG
TAAGTCATGCTCCGTATTTGTCCCTCTTCAGCTTATTGCTTATGATTTAT
TATTGTTATTATTATTATTATTATTACCACTATTTAGGGCTCCTGGATAC
TACTAAAATGAAGTTGGTAAATTCTTTTTTTAAACTGTCATCAATTTTTA
TTTTGTTGTTTCAGGTTTCATCAGAAAGGTTTTTAGCATCTTGATTTTGC
AAATGTCAGTCACCTTGGCATTTATTGCTTGGTTCATCTTTCAGTAAGTG
TACTTCCTTTTCTAAAACATAAATTTGATAGTTGATGATATTCAGTTTTT
CTTACCAGTTGTTTTTGGTATCTGGTCTTTCTTATGATCGAATCAGTGCT
TTTCAGACTTTTGGTTTTTATGGGTAAATGTAATGGATGGGCCATGGTCC
AAAATTAAAACTTAAATAAATAACTGGCGTTTTTTTGTGGGTTACATCCA
CCTTTTTGCTGTGCCCTCACACAATTGAAACCTTTTAAAGTATCTAGAAA
ATAGTTTTGAAATTTAGATGCCATCTACAATCTCGGTCAAAATATATTAG
GAATTTTGGTTAATGCCTCGTTTTCAACAATTTAAAGTTCGGGCGAAAAA
GTCGCTTTTGGGCAAATTGATAAATTGATTGTAATATTTCAATTCGGGAG
GGGATTATTGACTTCCAGGCTATATTCTGAGCCCTATTGGACCATTCTTG
GACTTTTAGTTCCTCTTAAGTCTAACTGTTAAAACTCTACCCGCCCAACC
TAATTTAGAGCGCTTCCTGGTTGTAAGATTTCGTGAGAATTTCCTTTTTT
TTCTCAAATATTACTTTAAAGGAAGAAACTTTAAAGGAAGAAACTTTAAA
GGAAGAAACTTTCGTGAATTCGCGATTTTTAGGCCAAATCGCGAATATTA
AATTCCGCGAAAAATGCTATACGAATGTGTTGATACATTTATTGTTTGTA
TTTGCTTTTATTTGGTGCGTGAGTAACAGACGAAGGTTTACGGAAGTGAA
TAGAAACAGTTTTCTTCTAGAATAATGTTAAAAATGTTTTTAAATTGCCT
TTATTCGCGAAAGTTAATTCTCGCGAAATATAATCAAAGGTGCTATTCGC
GAAAGTAAATTCCCAAAATTTCGCGATTTTTTCGCCTCGCTTCCTTTAAA
GTATGACTTTGATTGTACGTATTTTCAAGTTGTCCAATACTTAACGTCTA
AATATTTTTGTAGAAAAAGAAGAAAAAAATTAGTGTTTTCTTATCGAGCC
CAATATTTGTAAAGCGCAACAAAAGAAAGGTTTTCATTTTATAAATGAGG
ATATTGCATTGCTACTTTAATTTCTAAATTACTTTTCAAACTGGGTGCGT
CATTTCAACTTTGTTCCGTTTGCATACGCATGTCAAAATGAGGTTTTCAA
ATGACGATAAGGGGGTTGTCAAGAATAATTACATGAAAAAAGGTTGAAAC
GTTTGCCTATCATTGTGTTCTTGATTCTGTTAAAAAATAGCTGGTACAGT
GCTCGGCATTATATGAAACAATTAGTTTCTTTCAATTTCAGTGAACCAAC
GAAAGTGTTTGTCCAGAATCATGTTGGAATGTACATTGCCGGATAGTGAG
TTTCTCTTCTGTTACTCTTAGGTGCCTTATGATATAAATGGTCAATTTTT
CACTTCTTTTTCAAACTCCCAGAACCTAATTAATTTAATTTTTGAAAACG
TTTTTAACGTCAAAAGAAGAGTCCATTATTTTACTCCAAATAGTCAGATT
TAGTCTATAATTACCTTATTTTGGGGGGTTTTTAAAGGTATAATTTAATT
CCAACCCCCTGTTTATTAGTCACCTGAGTACTCCACGAGTTTTTTTTAAG
AAACAGTTAAACTTTTATTTGATTTTCTTGATTTTTTTTAAATATTCAAC
TGAGGTTAAAGAAAACATTCCTTAAACACTTCCCATTTTATTTTCAGTGT
TATTTTCTTGGTCCTGTATTTCGTGTTGGTGTGCTGCACAAGTGTGGCTC
GACGACATCCAATCAATTTGGTTTTGCTTGCCATTTTCACCATCAGTCTT
TCTTACATGGTTGCTGTCATCTCAAGCTTTCACGATACTAAAATTGTATT
GGCTTTGTTTGGAATGACATTGGTAATTTTTAATGTTTAAGAGTTTTTTG
GTAATAATATCTTCGATCCCAAGGGACTGGTATGTAAATTTCCCCTTTCA
TGGTATTGCAATAAGGAATTTTCTGTTATTTTTTAGTTGATCAGTGTTGG
CATTATTGGATTTGCATCCCAAACAAAGGTTAGTTAACAATATAACGGAA
AGAACCGCTATGGAACTGCTAAAAAATCATTTGAACGGGATTAGGCGAAA
TACATTTTTATTGAGATCACCAGAGCATATATAGGATCTTTTTCGACCCA
AATGGCCTTTTTTGAATTTTTTTTATCCTTTTAACCCACGAACCCGAGAA
AGATCTTAAATTCGGAATCAAATTCATTCATCTAAAGTTTTTTGAAGTAT
CAGCTTGCTAAATGCGCTAAATATTTCCTCTAACTACCATCAACCCCTCA
TTATAATTGTGTTGCTTTGCTTTTCAGTATGACTTCACCAAGTGGGCTGG
TGTTTTGTTTGTCTGTTGTTTCGCTTTGTTCATTTTTGGATTATTTGCCG
CCATCTTGATCCCAACTGGTGCTATGCAGGTAAAATTTATTCGTTTTGTT
TCATCTCGAACCACCTGTAATATGAAAAATGTCCAACGAGCCTTTCTATC
TACATTTCCAGCCAACATATATTTTTTTGTGTTGAAAAATGAGGGTGATA
TACACACTTGACAGGACTTTCATTAATTCATCTTTTGAAATATTTTCAGG
GTGTACGAATGGTGTATGCTGGACTTGGCGCGCTCCTCTTCATGGCTGTG
AGTAGTTTTCTGATATTGTGTGTTTAATTTTACCATTCCTTGCATTGATA
ATTATGCAGTATTTATGTGAAGCTTATTCTGTAACATGATTATTCATTGT
ACAGTAACATTATGAAGAATCGTGTCTCATAAAAATTTTTTTTTTTACAT
TAGTTCTTGGCATTTGACACTCAATTGATCATGGGAGGTAAGAAGTACGA
GATCAGTCCTGAGGATTACGTCTTTGCCGCCATGATGCTTTATGTGGACA
TAATCTACATCTTTTTGTATCTGTTGGCTTTGTTCGGTGGAAACAACTAA
CAAGTTCCGTCGCCAACCACATTCTGTCAATCTCTTGGATTGAGCAAAGT
CAAATTGAATTTTTCAACATCAAAATTTATATGATGTTCATATTTGATAT
TTTAAAATTGCTATATCAATTATATCATCTCAATCTATTTGGTTCAGTTT
TCCAAGTGAAGGCTTCGAACTTTTTGTATACATCAAATCAACTTGCTTTA
TCATACTCGATTAGCAGGTCAAATCTTCGACTTAGGATACTATATGTAAA
TTTTCATTTCTATTTTTTCCCAAATTTTTATTTTTGTGATGATCATGTCA
TTTTCTTTTTCTTCAGAAGTTTATTCAGATTAATTATGTGTGATTATTAT
ATTCATGACACATTGTAGAAAATAGTTGTATGTAAATAACTACGCATGTT
TGAAATAACAAAGTCGATTGGATGGCTTTTTCACTCATCTAATGAACTTT
GTTATGACATTACATAATGAAAAGAGGAGCATATACTTTAATCGGATTAA
ATTTCGCGAAAATGGCGAAAGTTAATCAGATTAAAGTACGTTTGGAAAAA
AATACAAAATAAAGTTTTTGCTTGGACAATTTTAATAATAGTGATTACCG
TTCGAACGAGCACTCAATTCAATGTAATGATAGGGGGTTTTTATTAATTT
TATAATTTTGGTAGGCGCAAACAGCGTCCCAAACACATCATATTACGTTT
CTTTTTGTAACCTAATAAGATCTTTTTGTATGATAAAGTTTTATTTTCTA
CTAATTGAAATAATAAAACTCTTCTTGTTTGAAATGAATGTGTCTTTTGT
TCGGAAAATATAATTTGAA

Coding sequence (CDS) from alignment at scaffold_118:191675..196143-

>TCONS_00046926 ID=TCONS_00046926|Name=TCONS_00046926|organism=Clytia hemisphaerica|type=CDS|length=8640bp|location=Sequence derived from alignment at scaffold_118:191675..196143- (Clytia hemisphaerica)
TTCTTGGCATTTGACACTCAATTGATCATGGGAGGTAAGAAGTACGAGAT
CAGTCCTGAGGATTACGTCTTTGCCGCCATGATGCTTTATGTGGACATAA
TCTACATCTTTTTGTATCTGTTGGCTTTGTTCGGTGGAAACAACTAAGGT
GTACGAATGGTGTATGCTGGACTTGGCGCGCTCCTCTTCATGGCTTATGA
CTTCACCAAGTGGGCTGGTGTTTTGTTTGTCTGTTGTTTCGCTTTGTTCA
TTTTTGGATTATTTGCCGCCATCTTGATCCCAACTGGTGCTATGCAGTTG
ATCAGTGTTGGCATTATTGGATTTGCATCCCAAACAAAGTGTTATTTTCT
TGGTCCTGTATTTCGTGTTGGTGTGCTGCACAAGTGTGGCTCGACGACAT
CCAATCAATTTGGTTTTGCTTGCCATTTTCACCATCAGTCTTTCTTACAT
GGTTGCTGTCATCTCAAGCTTTCACGATACTAAAATTGTATTGGCTTTGT
TTGGAATGACATTGTGAACCAACGAAAGTGTTTGTCCAGAATCATGTTGG
AATGTACATTGCCGGATAGTTTCATCAGAAAGGTTTTTAGCATCTTGATT
TTGCAAATGTCAGTCACCTTGGCATTTATTGCTTGGTTCATCTTTCAATG
TGGGTGTTAGAGTGTCCTTTCCCAATATGGTTTTGTGCTATCTTCAAATC
GCTTCCTTTATTTTGGCTATTATTTTCGTTCAAACAAAAGATAGAAAATA
AAGATTTTATAATGGCACAACCTCCAAGCTACGAAGCGTCACAAAATCCT
GGATACCAAGCACCTCTATACCAACCTCAGGATGGTGCCTACCCACCTCA
GAATGGTGCCTACCCTCCTCAGAATGGTGCTTACCCTCCTCCTAATACAG
GGATGGCTTATCCACCACCAACGCAAGGCTACCAACCAGTACCAGCAGAC
CAACAGCAACCTTATGTTTACCCCGGAAAGCAAGAACCAGGCGTAGATGT
AGAGTACCAAGGACATTCGGACGACAGTGATAAACAGACAATGGGAATCA
TTTCATTTGATGACAAAAGTATTCGGCTAATTCTTGGCATTTGACACTCA
ATTGATCATGGGAGGTAAGAAGTACGAGATCAGTCCTGAGGATTACGTCT
TTGCCGCCATGATGCTTTATGTGGACATAATCTACATCTTTTTGTATCTG
TTGGCTTTGTTCGGTGGAAACAACTAAGGTGTACGAATGGTGTATGCTGG
ACTTGGCGCGCTCCTCTTCATGGCTTATGACTTCACCAAGTGGGCTGGTG
TTTTGTTTGTCTGTTGTTTCGCTTTGTTCATTTTTGGATTATTTGCCGCC
ATCTTGATCCCAACTGGTGCTATGCAGTTGATCAGTGTTGGCATTATTGG
ATTTGCATCCCAAACAAAGTGTTATTTTCTTGGTCCTGTATTTCGTGTTG
GTGTGCTGCACAAGTGTGGCTCGACGACATCCAATCAATTTGGTTTTGCT
TGCCATTTTCACCATCAGTCTTTCTTACATGGTTGCTGTCATCTCAAGCT
TTCACGATACTAAAATTGTATTGGCTTTGTTTGGAATGACATTGTGAACC
AACGAAAGTGTTTGTCCAGAATCATGTTGGAATGTACATTGCCGGATAGT
TTCATCAGAAAGGTTTTTAGCATCTTGATTTTGCAAATGTCAGTCACCTT
GGCATTTATTGCTTGGTTCATCTTTCAATGTGGGTGTTAGAGTGTCCTTT
CCCAATATGGTTTTGTGCTATCTTCAAATCGCTTCCTTTATTTTGGCTAT
TATTTTCGTTCAAACAAAAGATAGAAAATAAAGATTTTATAATGGCACAA
CCTCCAAGCTACGAAGCGTCACAAAATCCTGGATACCAAGCACCTCTATA
CCAACCTCAGGATGGTGCCTACCCACCTCAGAATGGTGCCTACCCTCCTC
AGAATGGTGCTTACCCTCCTCCTAATACAGGGATGGCTTATCCACCACCA
ACGCAAGGCTACCAACCAGTACCAGCAGACCAACAGCAACCTTATGTTTA
CCCCGGAAAGCAAGAACCAGGCGTAGATGTAGAGTACCAAGGACATTCGG
ACGACAGTGATAAACAGACAATGGGAATCATTTCATTTGATGACAAAAGT
ATTCGGCTAATTCTTGGCATTTGACACTCAATTGATCATGGGAGGTAAGA
AGTACGAGATCAGTCCTGAGGATTACGTCTTTGCCGCCATGATGCTTTAT
GTGGACATAATCTACATCTTTTTGTATCTGTTGGCTTTGTTCGGTGGAAA
CAACTAAGGTGTACGAATGGTGTATGCTGGACTTGGCGCGCTCCTCTTCA
TGGCTTATGACTTCACCAAGTGGGCTGGTGTTTTGTTTGTCTGTTGTTTC
GCTTTGTTCATTTTTGGATTATTTGCCGCCATCTTGATCCCAACTGGTGC
TATGCAGTTGATCAGTGTTGGCATTATTGGATTTGCATCCCAAACAAAGT
GTTATTTTCTTGGTCCTGTATTTCGTGTTGGTGTGCTGCACAAGTGTGGC
TCGACGACATCCAATCAATTTGGTTTTGCTTGCCATTTTCACCATCAGTC
TTTCTTACATGGTTGCTGTCATCTCAAGCTTTCACGATACTAAAATTGTA
TTGGCTTTGTTTGGAATGACATTGTGAACCAACGAAAGTGTTTGTCCAGA
ATCATGTTGGAATGTACATTGCCGGATAGTTTCATCAGAAAGGTTTTTAG
CATCTTGATTTTGCAAATGTCAGTCACCTTGGCATTTATTGCTTGGTTCA
TCTTTCAATGTGGGTGTTAGAGTGTCCTTTCCCAATATGGTTTTGTGCTA
TCTTCAAATCGCTTCCTTTATTTTGGCTATTATTTTCGTTCAAACAAAAG
ATAGAAAATAAAGATTTTATAATGGCACAACCTCCAAGCTACGAAGCGTC
ACAAAATCCTGGATACCAAGCACCTCTATACCAACCTCAGGATGGTGCCT
ACCCACCTCAGAATGGTGCCTACCCTCCTCAGAATGGTGCTTACCCTCCT
CCTAATACAGGGATGGCTTATCCACCACCAACGCAAGGCTACCAACCAGT
ACCAGCAGACCAACAGCAACCTTATGTTTACCCCGGAAAGCAAGAACCAG
GCGTAGATGTAGAGTACCAAGGACATTCGGACGACAGTGATAAACAGACA
ATGGGAATCATTTCATTTGATGACAAAAGTATTCGGCTAATTCTTGGCAT
TTGACACTCAATTGATCATGGGAGGTAAGAAGTACGAGATCAGTCCTGAG
GATTACGTCTTTGCCGCCATGATGCTTTATGTGGACATAATCTACATCTT
TTTGTATCTGTTGGCTTTGTTCGGTGGAAACAACTAAGGTGTACGAATGG
TGTATGCTGGACTTGGCGCGCTCCTCTTCATGGCTTATGACTTCACCAAG
TGGGCTGGTGTTTTGTTTGTCTGTTGTTTCGCTTTGTTCATTTTTGGATT
ATTTGCCGCCATCTTGATCCCAACTGGTGCTATGCAGTTGATCAGTGTTG
GCATTATTGGATTTGCATCCCAAACAAAGTGTTATTTTCTTGGTCCTGTA
TTTCGTGTTGGTGTGCTGCACAAGTGTGGCTCGACGACATCCAATCAATT
TGGTTTTGCTTGCCATTTTCACCATCAGTCTTTCTTACATGGTTGCTGTC
ATCTCAAGCTTTCACGATACTAAAATTGTATTGGCTTTGTTTGGAATGAC
ATTGTGAACCAACGAAAGTGTTTGTCCAGAATCATGTTGGAATGTACATT
GCCGGATAGTTTCATCAGAAAGGTTTTTAGCATCTTGATTTTGCAAATGT
CAGTCACCTTGGCATTTATTGCTTGGTTCATCTTTCAATGTGGGTGTTAG
AGTGTCCTTTCCCAATATGGTTTTGTGCTATCTTCAAATCGCTTCCTTTA
TTTTGGCTATTATTTTCGTTCAAACAAAAGATAGAAAATAAAGATTTTAT
AATGGCACAACCTCCAAGCTACGAAGCGTCACAAAATCCTGGATACCAAG
CACCTCTATACCAACCTCAGGATGGTGCCTACCCACCTCAGAATGGTGCC
TACCCTCCTCAGAATGGTGCTTACCCTCCTCCTAATACAGGGATGGCTTA
TCCACCACCAACGCAAGGCTACCAACCAGTACCAGCAGACCAACAGCAAC
CTTATGTTTACCCCGGAAAGCAAGAACCAGGCGTAGATGTAGAGTACCAA
GGACATTCGGACGACAGTGATAAACAGACAATGGGAATCATTTCATTTGA
TGACAAAAGTATTCGGCTAATTCTTGGCATTTGACACTCAATTGATCATG
GGAGGTAAGAAGTACGAGATCAGTCCTGAGGATTACGTCTTTGCCGCCAT
GATGCTTTATGTGGACATAATCTACATCTTTTTGTATCTGTTGGCTTTGT
TCGGTGGAAACAACTAAGGTGTACGAATGGTGTATGCTGGACTTGGCGCG
CTCCTCTTCATGGCTTATGACTTCACCAAGTGGGCTGGTGTTTTGTTTGT
CTGTTGTTTCGCTTTGTTCATTTTTGGATTATTTGCCGCCATCTTGATCC
CAACTGGTGCTATGCAGTTGATCAGTGTTGGCATTATTGGATTTGCATCC
CAAACAAAGTGTTATTTTCTTGGTCCTGTATTTCGTGTTGGTGTGCTGCA
CAAGTGTGGCTCGACGACATCCAATCAATTTGGTTTTGCTTGCCATTTTC
ACCATCAGTCTTTCTTACATGGTTGCTGTCATCTCAAGCTTTCACGATAC
TAAAATTGTATTGGCTTTGTTTGGAATGACATTGTGAACCAACGAAAGTG
TTTGTCCAGAATCATGTTGGAATGTACATTGCCGGATAGTTTCATCAGAA
AGGTTTTTAGCATCTTGATTTTGCAAATGTCAGTCACCTTGGCATTTATT
GCTTGGTTCATCTTTCAATGTGGGTGTTAGAGTGTCCTTTCCCAATATGG
TTTTGTGCTATCTTCAAATCGCTTCCTTTATTTTGGCTATTATTTTCGTT
CAAACAAAAGATAGAAAATAAAGATTTTATAATGGCACAACCTCCAAGCT
ACGAAGCGTCACAAAATCCTGGATACCAAGCACCTCTATACCAACCTCAG
GATGGTGCCTACCCACCTCAGAATGGTGCCTACCCTCCTCAGAATGGTGC
TTACCCTCCTCCTAATACAGGGATGGCTTATCCACCACCAACGCAAGGCT
ACCAACCAGTACCAGCAGACCAACAGCAACCTTATGTTTACCCCGGAAAG
CAAGAACCAGGCGTAGATGTAGAGTACCAAGGACATTCGGACGACAGTGA
TAAACAGACAATGGGAATCATTTCATTTGATGACAAAAGTATTCGGCTAA
TTCTTGGCATTTGACACTCAATTGATCATGGGAGGTAAGAAGTACGAGAT
CAGTCCTGAGGATTACGTCTTTGCCGCCATGATGCTTTATGTGGACATAA
TCTACATCTTTTTGTATCTGTTGGCTTTGTTCGGTGGAAACAACTAAGGT
GTACGAATGGTGTATGCTGGACTTGGCGCGCTCCTCTTCATGGCTTATGA
CTTCACCAAGTGGGCTGGTGTTTTGTTTGTCTGTTGTTTCGCTTTGTTCA
TTTTTGGATTATTTGCCGCCATCTTGATCCCAACTGGTGCTATGCAGTTG
ATCAGTGTTGGCATTATTGGATTTGCATCCCAAACAAAGTGTTATTTTCT
TGGTCCTGTATTTCGTGTTGGTGTGCTGCACAAGTGTGGCTCGACGACAT
CCAATCAATTTGGTTTTGCTTGCCATTTTCACCATCAGTCTTTCTTACAT
GGTTGCTGTCATCTCAAGCTTTCACGATACTAAAATTGTATTGGCTTTGT
TTGGAATGACATTGTGAACCAACGAAAGTGTTTGTCCAGAATCATGTTGG
AATGTACATTGCCGGATAGTTTCATCAGAAAGGTTTTTAGCATCTTGATT
TTGCAAATGTCAGTCACCTTGGCATTTATTGCTTGGTTCATCTTTCAATG
TGGGTGTTAGAGTGTCCTTTCCCAATATGGTTTTGTGCTATCTTCAAATC
GCTTCCTTTATTTTGGCTATTATTTTCGTTCAAACAAAAGATAGAAAATA
AAGATTTTATAATGGCACAACCTCCAAGCTACGAAGCGTCACAAAATCCT
GGATACCAAGCACCTCTATACCAACCTCAGGATGGTGCCTACCCACCTCA
GAATGGTGCCTACCCTCCTCAGAATGGTGCTTACCCTCCTCCTAATACAG
GGATGGCTTATCCACCACCAACGCAAGGCTACCAACCAGTACCAGCAGAC
CAACAGCAACCTTATGTTTACCCCGGAAAGCAAGAACCAGGCGTAGATGT
AGAGTACCAAGGACATTCGGACGACAGTGATAAACAGACAATGGGAATCA
TTTCATTTGATGACAAAAGTATTCGGCTAATTCTTGGCATTTGACACTCA
ATTGATCATGGGAGGTAAGAAGTACGAGATCAGTCCTGAGGATTACGTCT
TTGCCGCCATGATGCTTTATGTGGACATAATCTACATCTTTTTGTATCTG
TTGGCTTTGTTCGGTGGAAACAACTAAGGTGTACGAATGGTGTATGCTGG
ACTTGGCGCGCTCCTCTTCATGGCTTATGACTTCACCAAGTGGGCTGGTG
TTTTGTTTGTCTGTTGTTTCGCTTTGTTCATTTTTGGATTATTTGCCGCC
ATCTTGATCCCAACTGGTGCTATGCAGTTGATCAGTGTTGGCATTATTGG
ATTTGCATCCCAAACAAAGTGTTATTTTCTTGGTCCTGTATTTCGTGTTG
GTGTGCTGCACAAGTGTGGCTCGACGACATCCAATCAATTTGGTTTTGCT
TGCCATTTTCACCATCAGTCTTTCTTACATGGTTGCTGTCATCTCAAGCT
TTCACGATACTAAAATTGTATTGGCTTTGTTTGGAATGACATTGTGAACC
AACGAAAGTGTTTGTCCAGAATCATGTTGGAATGTACATTGCCGGATAGT
TTCATCAGAAAGGTTTTTAGCATCTTGATTTTGCAAATGTCAGTCACCTT
GGCATTTATTGCTTGGTTCATCTTTCAATGTGGGTGTTAGAGTGTCCTTT
CCCAATATGGTTTTGTGCTATCTTCAAATCGCTTCCTTTATTTTGGCTAT
TATTTTCGTTCAAACAAAAGATAGAAAATAAAGATTTTATAATGGCACAA
CCTCCAAGCTACGAAGCGTCACAAAATCCTGGATACCAAGCACCTCTATA
CCAACCTCAGGATGGTGCCTACCCACCTCAGAATGGTGCCTACCCTCCTC
AGAATGGTGCTTACCCTCCTCCTAATACAGGGATGGCTTATCCACCACCA
ACGCAAGGCTACCAACCAGTACCAGCAGACCAACAGCAACCTTATGTTTA
CCCCGGAAAGCAAGAACCAGGCGTAGATGTAGAGTACCAAGGACATTCGG
ACGACAGTGATAAACAGACAATGGGAATCATTTCATTTGATGACAAAAGT
ATTCGGCTAATTCTTGGCATTTGACACTCAATTGATCATGGGAGGTAAGA
AGTACGAGATCAGTCCTGAGGATTACGTCTTTGCCGCCATGATGCTTTAT
GTGGACATAATCTACATCTTTTTGTATCTGTTGGCTTTGTTCGGTGGAAA
CAACTAAGGTGTACGAATGGTGTATGCTGGACTTGGCGCGCTCCTCTTCA
TGGCTTATGACTTCACCAAGTGGGCTGGTGTTTTGTTTGTCTGTTGTTTC
GCTTTGTTCATTTTTGGATTATTTGCCGCCATCTTGATCCCAACTGGTGC
TATGCAGTTGATCAGTGTTGGCATTATTGGATTTGCATCCCAAACAAAGT
GTTATTTTCTTGGTCCTGTATTTCGTGTTGGTGTGCTGCACAAGTGTGGC
TCGACGACATCCAATCAATTTGGTTTTGCTTGCCATTTTCACCATCAGTC
TTTCTTACATGGTTGCTGTCATCTCAAGCTTTCACGATACTAAAATTGTA
TTGGCTTTGTTTGGAATGACATTGTGAACCAACGAAAGTGTTTGTCCAGA
ATCATGTTGGAATGTACATTGCCGGATAGTTTCATCAGAAAGGTTTTTAG
CATCTTGATTTTGCAAATGTCAGTCACCTTGGCATTTATTGCTTGGTTCA
TCTTTCAATGTGGGTGTTAGAGTGTCCTTTCCCAATATGGTTTTGTGCTA
TCTTCAAATCGCTTCCTTTATTTTGGCTATTATTTTCGTTCAAACAAAAG
ATAGAAAATAAAGATTTTATAATGGCACAACCTCCAAGCTACGAAGCGTC
ACAAAATCCTGGATACCAAGCACCTCTATACCAACCTCAGGATGGTGCCT
ACCCACCTCAGAATGGTGCCTACCCTCCTCAGAATGGTGCTTACCCTCCT
CCTAATACAGGGATGGCTTATCCACCACCAACGCAAGGCTACCAACCAGT
ACCAGCAGACCAACAGCAACCTTATGTTTACCCCGGAAAGCAAGAACCAG
GCGTAGATGTAGAGTACCAAGGACATTCGGACGACAGTGATAAACAGACA
ATGGGAATCATTTCATTTGATGACAAAAGTATTCGGCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029936XLOC_029936Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046926-exon-scaffold_118-1575043694:195695..196143TCONS_00046926-exon-scaffold_118-1575043694:195695..196143Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1575043694:195451..195529TCONS_00046926-exon-scaffold_118-1575043694:195451..195529Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1575043694:194099..194152TCONS_00046926-exon-scaffold_118-1575043694:194099..194152Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1575043694:193572..193746TCONS_00046926-exon-scaffold_118-1575043694:193572..193746Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1575043694:193416..193457TCONS_00046926-exon-scaffold_118-1575043694:193416..193457Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1575043694:193015..193116TCONS_00046926-exon-scaffold_118-1575043694:193015..193116Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1575043694:192797..192844TCONS_00046926-exon-scaffold_118-1575043694:192797..192844Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1575043694:191675..192640TCONS_00046926-exon-scaffold_118-1575043694:191675..192640Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1510915933:195695..196143TCONS_00046926-exon-scaffold_118-1510915933:195695..196143Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1510915933:195451..195529TCONS_00046926-exon-scaffold_118-1510915933:195451..195529Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1510915933:194099..194152TCONS_00046926-exon-scaffold_118-1510915933:194099..194152Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1510915933:193572..193746TCONS_00046926-exon-scaffold_118-1510915933:193572..193746Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1510915933:193416..193457TCONS_00046926-exon-scaffold_118-1510915933:193416..193457Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1510915933:193015..193116TCONS_00046926-exon-scaffold_118-1510915933:193015..193116Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1510915933:192797..192844TCONS_00046926-exon-scaffold_118-1510915933:192797..192844Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1510915933:191675..192640TCONS_00046926-exon-scaffold_118-1510915933:191675..192640Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1491911889:195695..196143TCONS_00046926-exon-scaffold_118-1491911889:195695..196143Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1491911889:195451..195529TCONS_00046926-exon-scaffold_118-1491911889:195451..195529Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1491911889:194099..194152TCONS_00046926-exon-scaffold_118-1491911889:194099..194152Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1491911889:193572..193746TCONS_00046926-exon-scaffold_118-1491911889:193572..193746Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1491911889:193416..193457TCONS_00046926-exon-scaffold_118-1491911889:193416..193457Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1491911889:193015..193116TCONS_00046926-exon-scaffold_118-1491911889:193015..193116Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1491911889:192797..192844TCONS_00046926-exon-scaffold_118-1491911889:192797..192844Clytia hemisphaericaexon
TCONS_00046926-exon-scaffold_118-1491911889:191675..192640TCONS_00046926-exon-scaffold_118-1491911889:191675..192640Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046926-proteinTCONS_00046926-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_118supercontigscaffold_118:191675..196143 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
78.3387	77.0325	104.651	119.153	93.7846	68.002	69.5258	72.6724	88.1361	74.8508	81.3845	70.2246	72.8041	70.395	67.8615	72.4392	67.8901	74.6854	72.8576	85.1466	74.4749	75.2318	77.1548	80.3154	57.0277	56.6185	111.095	103.018	63.3364	50.808
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006214Bax_inhibitor_1-related
Blast
[Close]
BLAST of TCONS_00046926 vs. Swiss-Prot (Human)
Match: LFG2 (Protein lifeguard 2 OS=Homo sapiens GN=FAIM2 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.414e-41
Identity = 113/305 (37.05%), Postives = 165/305 (54.10%), Query Frame = 2 
Query:  134 AQPPSYE-ASQNPGYQAPLYQPQDGAYPPQNGAYPPQNGAYPPPNTGMAYPPPTQGYQPVPADQQQPYVYPGKQEPGVDVEYQGHSDDSDKQTMGIISFDDKSIRLSFIRKVFSILILQMSVTLAFIAWFIFHEPTKVFVQNHVGMYIAGXXXXXXXXXXXXCCTSVARRHPINLVLLAIFTISLSYMVAVISSFHDTKIVLALFGMTLLISVGIIGFASQTKYDFTKWAGVLFVCCXXXXXXXXXXXXXXPTGAMQGVRMVYXXXXXXXXXXXXXXDTQLIMGGKKYEISPEDYVFAAMMLYVD 1045
            + PPSYE A+   G +A                     GA+PP  T             VP      YV     +P     Y       D +     S+DD+ +R  F+RKV++IL++Q+ VTLA +A F F +P K +VQ + G Y A Y +F   Y  L CC+   R  P NL+LL +FT+S++Y+  ++SS+++T  VL   G+T L+ + +  F+ QTK+DFT   GVLFV    LF  GL  AIL+P   +  +  VYA LGA +F  FLA DTQL+MG +++ +SPE+Y+F A+ +Y+D
Sbjct:   33 SAPPSYEEATSGEGMKA---------------------GAFPPAPTA------------VPLHPSWAYV-----DPSSSSSYDNGFPTGDHELFTTFSWDDQKVRRVFVRKVYTILLIQLLVTLAVVALFTFCDPVKDYVQANPGWYWASYAVFFATYLTLACCSGPRRHFPWNLILLTVFTLSMAYLTGMLSSYYNTTSVLLCLGITALVCLSVTVFSFQTKFDFTSCQGVLFVLLMTLFFSGLILAILLPFQYVPWLHAVYAALGAGVFTLFLALDTQLLMGNRRHSLSPEEYIFGALNIYLD 299
The following BLAST results are available for this feature:
BLAST of TCONS_00046926 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LFG22.414e-4137.05Protein lifeguard 2 OS=Homo sapiens GN=FAIM2 PE=1 ... [more]
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