TCONS_00046850 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046850
Unique NameTCONS_00046850
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length166

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046850 ID=TCONS_00046850|Name=TCONS_00046850|organism=Clytia hemisphaerica|type=transcript|length=166bp
CAGGTTTGCTTGAAAATAAATAGTTAAATTTTGAATTGTCTTTGGGAAAC
GGGTGTCTGGTAGAAGCGTGTCTGAGTGATATTCAAATCGATTGAAGTTC
GGATTTCTAAGCAATCCTAAAAGACTTTGGAAGCAAATAGGAACACCATT
ATGTTCTCGGTTAGAT
Run BLAST on NCBI

transcript from alignment at scaffold_117:271217..271382

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046850 ID=TCONS_00046850|Name=TCONS_00046850|organism=Clytia hemisphaerica|type=transcript|length=166bp|location=Sequence derived from alignment at scaffold_117:271217..271382 (Clytia hemisphaerica)
ATCTAACCGAGAACATAATGGTGTTCCTATTTGCTTCCAAAGTCTTTTAG
GATTGCTTAGAAATCCGAACTTCAATCGATTTGAATATCACTCAGACACG
CTTCTACCAGACACCCGTTTCCCAAAGACAATTCAAAATTTAACTATTTA
TTTTCAAGCAAACCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029894XLOC_029894Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046850-exon-scaffold_117-1491911889:271217..271382TCONS_00046850-exon-scaffold_117-1491911889:271217..271382Clytia hemisphaericaexon
TCONS_00046850-exon-scaffold_117-1510915933:271217..271382TCONS_00046850-exon-scaffold_117-1510915933:271217..271382Clytia hemisphaericaexon
TCONS_00046850-exon-scaffold_117-1575043694:271217..271382TCONS_00046850-exon-scaffold_117-1575043694:271217..271382Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_117supercontigscaffold_117:271217..271382 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046850 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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